BLASTX nr result
ID: Atropa21_contig00023646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023646
(2733 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A... 124 8e-41
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 111 6e-31
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 100 7e-28
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 100 7e-28
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 100 1e-27
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 100 1e-27
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A... 95 5e-26
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A... 125 8e-26
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 87 3e-25
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A... 122 6e-25
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 89 7e-22
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 104 7e-20
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera] 77 2e-17
emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera] 78 2e-17
emb|CAN75589.1| hypothetical protein VITISV_042880 [Vitis vinifera] 75 3e-16
ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein A... 94 4e-16
emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera] 77 7e-16
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 92 9e-16
emb|CAN78294.1| hypothetical protein VITISV_035517 [Vitis vinifera] 77 2e-15
emb|CAN79574.1| hypothetical protein VITISV_017342 [Vitis vinifera] 77 6e-14
>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
[Solanum tuberosum]
Length = 284
Score = 124 bits (310), Expect(2) = 8e-41
Identities = 55/104 (52%), Positives = 72/104 (69%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FS ++ + G T W WK +PTK+KCFTWLV ++ACLT EVLQK+G QLV
Sbjct: 101 FSANSAYRRGLQVMAGRPTHFWNYFWKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLV 160
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTMPEHT 1696
RC+LC+ T+ETNSHLF+HC TA + +LF S++ +WTMPE T
Sbjct: 161 PRCFLCNLTSETNSHLFLHCNYTAQIWNLFLSISNLNWTMPERT 204
Score = 73.2 bits (178), Expect(2) = 8e-41
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 13/73 (17%)
Frame = +3
Query: 1698 IRRGGSKSQR-----------WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANV 1838
+RRGG+KSQ+ W++WKERN RCF+++ NS+ KV+ CI +L FWCK+ +
Sbjct: 212 VRRGGTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFWCKQLCI 271
Query: 1839 EGAEQLVDFLGSL 1877
+Q+VD +GSL
Sbjct: 272 VDTDQIVDLIGSL 284
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 111 bits (278), Expect(2) = 6e-31
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW +WK +P K+ FTWL RKACLTHEV+Q+RG+Q+ SRC++C E AE NSHLF+HC
Sbjct: 91 PWKLIWKIKIPHKVSGFTWLAIRKACLTHEVIQRRGIQICSRCFMCGEEAEVNSHLFLHC 150
Query: 1625 RVTAHL*SLFFSLTENSWTMPEHT 1696
R A+L ++F + +W MP+ T
Sbjct: 151 RTAANLWNMFLCILGVNWVMPKTT 174
Score = 52.4 bits (124), Expect(2) = 6e-31
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFLGSL 1877
WT+WKERN R + K NS QK++ ++ L+FWCK+ V + LVDF L
Sbjct: 204 WTLWKERNERSHDGKLNSTQKIKMNSLSLLYFWCKQDLVGEVDSLVDFKAQL 255
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 100 bits (250), Expect(2) = 7e-28
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW +VWK +P K+ CF WL+ ++A LT + + KRG+ L SRC+LC ET ET +HLF+HC
Sbjct: 393 PWKQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHC 452
Query: 1625 RVTAHL*SLFFSLTENSWTMP 1687
+ T L +F SL SWTMP
Sbjct: 453 KYTRQLWRIFLSLKGISWTMP 473
Score = 52.8 bits (125), Expect(2) = 7e-28
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQ--KVECIANLHFWCKEANVEGAEQLVDFLGSL 1877
W IWKERN RCFE NS+Q K+ CI L FWC + +VD L S+
Sbjct: 505 WAIWKERNSRCFEGIENSVQDVKLNCILLLCFWCNQLYSNDTASIVDVLDSI 556
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 100 bits (250), Expect(2) = 7e-28
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW +VWK +P K+ CF WL+ ++A LT + + KRG+ L SRC+LC ET ET +HLF+HC
Sbjct: 287 PWKQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHC 346
Query: 1625 RVTAHL*SLFFSLTENSWTMP 1687
+ T L +F SL SWTMP
Sbjct: 347 KYTRQLWRIFLSLKGISWTMP 367
Score = 52.8 bits (125), Expect(2) = 7e-28
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQ--KVECIANLHFWCKEANVEGAEQLVDFLGSL 1877
W IWKERN RCFE NS+Q K+ CI L FWC + +VD L S+
Sbjct: 399 WAIWKERNSRCFEGIENSVQDVKLNCILLLCFWCNQLYSNDTASIVDVLDSI 450
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 100 bits (249), Expect(2) = 1e-27
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +2
Query: 1415 VLEQPGGRTG--PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSE 1588
++EQP + PW ++WK +P K+ CF WL+ ++A LT + + KRG+ L SRC+LC E
Sbjct: 224 LMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGE 283
Query: 1589 TAETNSHLFMHCRVTAHL*SLFFSLTENSWTMP 1687
T+ET +HLF+HC+ T L +F SL SW MP
Sbjct: 284 TSETVNHLFLHCKFTQQLWRVFLSLKGISWAMP 316
Score = 52.4 bits (124), Expect(2) = 1e-27
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFLGSL 1877
W WKERN RCFE NS+QKV+ CI L FWC + ++D L S+
Sbjct: 348 WATWKERNSRCFESVENSMQKVKLNCILLLCFWCNQLYSNETVSIIDVLDSI 399
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 100 bits (249), Expect(2) = 1e-27
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +2
Query: 1415 VLEQPGGRTG--PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSE 1588
++EQP + PW ++WK +P K+ CF WL+ ++A LT + + KRG+ L SRC+LC E
Sbjct: 148 LMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGE 207
Query: 1589 TAETNSHLFMHCRVTAHL*SLFFSLTENSWTMP 1687
T+ET +HLF+HC+ T L +F SL SW MP
Sbjct: 208 TSETVNHLFLHCKFTQQLWRVFLSLKGISWAMP 240
Score = 52.4 bits (124), Expect(2) = 1e-27
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFLGSL 1877
W WKERN RCFE NS+QKV+ CI L FWC + ++D L S+
Sbjct: 272 WATWKERNSRCFESVENSMQKVKLNCILLLCFWCNQLYSNETVSIIDVLDSI 323
>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 397
Score = 94.7 bits (234), Expect(2) = 5e-26
Identities = 46/100 (46%), Positives = 60/100 (60%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW +WK +P K+ FTWLV ++A LT E L KRG+Q+ RC C + AET +HLF+HC
Sbjct: 234 PWKLIWKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCPRCCFCEQVAETINHLFLHC 293
Query: 1625 RVTAHL*SLFFSLTENSWTMPEHTD*KRRKQISEVDNLEG 1744
+V L +LF S SWT+P T Q E N+EG
Sbjct: 294 KVVGKLWNLFTSFRGISWTVPGRTG-----QALESWNMEG 328
Score = 52.8 bits (125), Expect(2) = 5e-26
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFLGSL 1877
WTIWKERN R F++K + L K++ CI +WC ++ +VD LGSL
Sbjct: 346 WTIWKERNSRNFDNKSSPLHKIKMNCIITFCYWCSSEYIDDPVAIVDILGSL 397
>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 517
Score = 125 bits (315), Expect = 8e-26
Identities = 57/123 (46%), Positives = 78/123 (63%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FSV ++ + G T W WK +PTK+KCFTWLV ++ACLT EVLQK+G QLV
Sbjct: 334 FSVNSAYRRGLQVMAGRPTHFWNYFWKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLV 393
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTMPEHTD*KRRKQISEVDNLEG 1744
RC+LC+ T+ETNSHLF+HC TA + +LF S++ +WTMPE T + +
Sbjct: 394 PRCFLCNLTSETNSHLFLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGSTKSQ 453
Query: 1745 EKW 1753
++W
Sbjct: 454 KRW 456
Score = 69.7 bits (169), Expect = 6e-09
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 13/73 (17%)
Frame = +3
Query: 1698 IRRGGSKSQR-----------WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANV 1838
+RRG +KSQ+ W++WKERN RCF+++ NS+ KV+ CI +L FWCK+ +
Sbjct: 445 VRRGSTKSQKRWWRLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIVSLLFWCKQLCI 504
Query: 1839 EGAEQLVDFLGSL 1877
+Q+VD +G+L
Sbjct: 505 VDTDQIVDLIGNL 517
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 87.4 bits (215), Expect(2) = 3e-25
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW +W++ +P K+ FTWL+ ++A LTHE L KR L S CYLC E ET +HLF+HC
Sbjct: 54 PWRMIWRTEIPYKVNYFTWLLAKQAVLTHENLNKRKPNLRSSCYLCEEQVETVNHLFLHC 113
Query: 1625 RVTAHL*SLFFSLTENSWTMP 1687
+ T L +F + WT P
Sbjct: 114 KWTDQLWQMFIQKRKIKWTKP 134
Score = 57.4 bits (137), Expect(2) = 3e-25
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFL 1868
WTIWKERN RCFE K N++QK++ C+ +FWCK+ + AE + + +
Sbjct: 166 WTIWKERNQRCFEGKQNNIQKIKTNCLGLYYFWCKQVVIGDAENVFNII 214
>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
[Solanum tuberosum]
Length = 284
Score = 122 bits (307), Expect = 6e-25
Identities = 55/123 (44%), Positives = 77/123 (62%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FSV ++ + G W WK +PTK+KCFTWLV ++ACLT EVLQK+G QLV
Sbjct: 101 FSVNSAYRRGLQVMAGRPKHLWNYFWKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLV 160
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTMPEHTD*KRRKQISEVDNLEG 1744
RC+LC+ T+ETNSHLF+HC TA + +LF +++ +WTMPE T + +
Sbjct: 161 PRCFLCNLTSETNSHLFLHCNYTAQIWNLFLNISNLNWTMPERTSNVLKSWVRRGSTKSQ 220
Query: 1745 EKW 1753
++W
Sbjct: 221 KRW 223
Score = 65.9 bits (159), Expect = 9e-08
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 13/73 (17%)
Frame = +3
Query: 1698 IRRGGSKSQR-----------WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANV 1838
+RRG +KSQ+ W++WKERN RCF+++ NS+ KV+ CI +L F CK+ +
Sbjct: 212 VRRGSTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFLCKQLCI 271
Query: 1839 EGAEQLVDFLGSL 1877
+Q+VD +GSL
Sbjct: 272 VDTDQIVDLIGSL 284
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 89.0 bits (219), Expect(2) = 7e-22
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW +W++ +P K+ FTW+ +ACLT + ++KR +Q +RCY+C + AET HL +HC
Sbjct: 139 PWKLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQFPNRCYMCKKEAETPRHLLLHC 198
Query: 1625 RVTAHL*SLFFSLTENSWTMP 1687
V + L S+FF L+ +WT P
Sbjct: 199 EVASELWSMFFCLSGINWTTP 219
Score = 44.7 bits (104), Expect(2) = 7e-22
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSL--QKVECIANLHFWCKEANVEGAEQLVDFLGSL 1877
W+IW ERN RCF+ + +L K C NL W AEQL DF SL
Sbjct: 251 WSIWLERNKRCFDGESTALGILKTRCTENLFSWTNLYPAVNAEQLQDFTNSL 302
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 104 bits (260), Expect(2) = 7e-20
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2
Query: 1445 PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSETAETNSHLFMHC 1624
PW ++WK+ P K+ CFTWLV KACLTH+ LQ+RG L SRC+LC + AETN HLF+HC
Sbjct: 384 PWKEIWKARAPFKVVCFTWLVVWKACLTHDKLQRRGFHLCSRCFLCHQEAETNGHLFLHC 443
Query: 1625 RVTAHL*SLFFSLTENSW 1678
T L LF +L + +W
Sbjct: 444 SFTRQLWQLFAALAQIAW 461
Score = 21.9 bits (45), Expect(2) = 7e-20
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1729 GQFGRREMGGVLRINLIVCRK 1791
GQFG+R M VL+ + R+
Sbjct: 478 GQFGKRGMQDVLKAGAVQSRR 498
>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
Length = 2095
Score = 77.4 bits (189), Expect(2) = 2e-17
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRT-GPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQL 1561
FSVR ++ + +PGG + P ++W++ VP K+ F W LT E LQ+RG L
Sbjct: 1912 FSVRXLYSMM---EPGGLSLXPSXRIWRARVPPKVAFFAWEAXWGKVLTQEQLQRRGFSL 1968
Query: 1562 VSRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTM 1684
+RC+LC ET HL +HC T L +L FSL SWT+
Sbjct: 1969 ANRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLFGISWTL 2009
Score = 41.2 bits (95), Expect(2) = 2e-17
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQ--KVECIANLHFWCKEANVEGAEQLVDFL 1868
WT+WKERN F D+ SLQ K + NL +W + + E LV F+
Sbjct: 2042 WTVWKERNRLAFGDEDLSLQRLKYSFVCNLWYWVRGSLAESHSSLVSFI 2090
>emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
Length = 1636
Score = 78.2 bits (191), Expect(2) = 2e-17
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRT-GPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQL 1561
FSVR ++ + +PGG + P ++W++ VP K+ F W + LT E LQ+RG L
Sbjct: 1453 FSVRSLYSMM---EPGGLSLFPSERIWRTRVPPKVAFFAWEASWGKVLTQEQLQRRGFSL 1509
Query: 1562 VSRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTM 1684
+RC+LC ET HL +HC T L +L FSL SWT+
Sbjct: 1510 ANRCFLCLSEEETVDHLLLHCVKTRDLWNLLFSLFGISWTL 1550
Score = 40.4 bits (93), Expect(2) = 2e-17
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQ--KVECIANLHFWCKEANVEGAEQLVDFL 1868
W++WKERN F D+ SLQ K + NL FW + + E LV F+
Sbjct: 1583 WSVWKERNRLAFGDEDLSLQRLKYSFVCNLWFWVRGSLAESHSSLVSFV 1631
>emb|CAN75589.1| hypothetical protein VITISV_042880 [Vitis vinifera]
Length = 816
Score = 75.5 bits (184), Expect(2) = 3e-16
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FSV+ ++ L+ G PW +W VPTK+ F W + LT + L++RG L
Sbjct: 501 FSVKSLYN--TLDSSGAXPFPWRIIWSPCVPTKVGFFAWEASWGKVLTQDQLKRRGWILA 558
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTMP-EHTD*KRRKQISEVDNLE 1741
+RC+LC + ET +H+ +HC L +L FSL +W +P D S VD
Sbjct: 559 NRCFLCCDEEETINHILIHCPKARVLWNLVFSLFGVNWVLPLTVRDTLLGWSTSFVDKKR 618
Query: 1742 GEKW 1753
G+ W
Sbjct: 619 GKTW 622
Score = 38.9 bits (89), Expect(2) = 3e-16
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFLGSL--*IVCLT 1895
WT+WKERN F ++ S+Q+++ I NL W K L++F+ L IV
Sbjct: 631 WTVWKERNRIVFYNEALSIQRLKNSFICNLFSWSKSCLDGEPRSLINFVDWLQEAIVSKE 690
Query: 1896 APRGQLFGGLQH*DMLRNTIYQF 1964
P L+ D+L++T++ +
Sbjct: 691 VPATTFSDALRSLDLLKSTLHAY 713
>ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 258
Score = 93.6 bits (231), Expect = 4e-16
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = +2
Query: 1415 VLEQPGGRTG--PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSE 1588
++ Q G + PW +WK +P K+ FTWLV ++A LT E L KRG+Q+ RC C +
Sbjct: 159 IMNQMGSQVNFLPWKLIWKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCPRCCFCEQ 218
Query: 1589 TAETNSHLFMHCRVTAHL*SLFFSLTENSWTMP 1687
AET +HLF+HC+V L +LF S SWT+P
Sbjct: 219 VAETINHLFLHCKVVGQLWNLFTSFRGISWTVP 251
>emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]
Length = 779
Score = 77.4 bits (189), Expect(2) = 7e-16
Identities = 41/100 (41%), Positives = 56/100 (56%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FSVR ++ + LE G P ++W++ VP K+ F W + LT E LQ+RG L
Sbjct: 531 FSVRSLYSM--LEPGGLPLFPSERIWRARVPPKVAFFAWEASWGKVLTQEQLQRRGFSLA 588
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTM 1684
+RC+LC ET HL +HC T L +L FSL SWT+
Sbjct: 589 NRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLFGISWTL 628
Score = 35.8 bits (81), Expect(2) = 7e-16
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQ--KVECIANLHFWCKEANVE 1841
WT+WKERN F D+ SLQ K + NL +W + + E
Sbjct: 661 WTVWKERNRLAFGDEDLSLQRLKYSFVCNLWYWVRGSLAE 700
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 92.4 bits (228), Expect = 9e-16
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 1415 VLEQPGGRTG--PWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLVSRCYLCSE 1588
++EQP + PW ++WK +P K+ CF WL+ ++A LT + + KRG+ L SRC+LC E
Sbjct: 242 LMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGE 301
Query: 1589 TAETNSHLFMHCRVTAHL*SLFFSL 1663
T+ET +HLF+HC+ T L +F SL
Sbjct: 302 TSETVNHLFLHCKFTQQLWRVFLSL 326
>emb|CAN78294.1| hypothetical protein VITISV_035517 [Vitis vinifera]
Length = 350
Score = 77.4 bits (189), Expect(2) = 2e-15
Identities = 39/100 (39%), Positives = 56/100 (56%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FSV+ ++ +LE G P+ +WK+ VP K+ F W + LT + LQ+RG L
Sbjct: 164 FSVKSLYS--ILEPGGSAMFPYVGIWKASVPPKVAFFAWEASWGKILTLDQLQRRGYSLA 221
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTM 1684
+RC+LC AET HL +HC +T L +L FSL W +
Sbjct: 222 NRCFLCLAEAETVDHLLLHCVMTRTLWNLLFSLFGVEWVL 261
Score = 34.3 bits (77), Expect(2) = 2e-15
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDFL 1868
W++WKERN F ++ S+Q+++ + NL W + V LV F+
Sbjct: 294 WSVWKERNSLAFGNEVLSIQRLKHSFVCNLWSWVRMFIVLSPRSLVSFI 342
>emb|CAN79574.1| hypothetical protein VITISV_017342 [Vitis vinifera]
Length = 1367
Score = 76.6 bits (187), Expect(2) = 6e-14
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = +2
Query: 1385 FSVRRIHKLEVLEQPGGRTGPWTKVWKSLVPTKIKCFTWLVTRKACLTHEVLQKRGMQLV 1564
FSV+ ++ LE+ G P+ +W++ VP K+ F W + LT + LQ+RG L
Sbjct: 1181 FSVKSLYS--TLERGGSTLFPYVGIWRACVPPKVAVFAWEASWGKILTLDQLQRRGYSLA 1238
Query: 1565 SRCYLCSETAETNSHLFMHCRVTAHL*SLFFSLTENSWTM 1684
+RC+LC AET HL +HC +T L +L FSL W +
Sbjct: 1239 NRCFLCLAEAETVDHLLLHCVMTRALWNLLFSLFGVEWVL 1278
Score = 30.0 bits (66), Expect(2) = 6e-14
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 1728 WTIWKERNGRCFEDKFNSLQKVE--CIANLHFWCKEANVEGAEQLVDF 1865
W++WKERN F ++ S+Q+++ + NL W + LV F
Sbjct: 1311 WSVWKERNLLAFGNEVLSIQRLKHSFVCNLWSWVRVFIXLSPRSLVSF 1358