BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023607
         (1036 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   175   3e-41
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   138   4e-30
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   135   3e-29
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   135   3e-29
gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus pe...   133   1e-28
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   133   1e-28
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   133   1e-28
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   133   1e-28
gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma c...   124   6e-26
ref|XP_002312652.1| RNA recognition motif-containing family prot...   121   4e-25
gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma c...   120   9e-25
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   119   2e-24
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   118   3e-24
ref|XP_002315647.1| RNA recognition motif-containing family prot...   118   4e-24
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   114   5e-23
gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Th...   110   7e-22
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A...   104   5e-20
emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]    97   1e-17
gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma c...    92   4e-16
gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma c...    92   4e-16

>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  175 bits (443), Expect = 3e-41
 Identities = 105/197 (53%), Positives = 107/197 (54%), Gaps = 1/197 (0%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            MMPPF AVNPMGLPGVAPHVNPAFFGRG+AAN                  W         
Sbjct: 453  MMPPFQAVNPMGLPGVAPHVNPAFFGRGMAANGMGMMSAAGMDGPHPGM-WTDTSGGGWG 511

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG-XXXXXXXXXXXXXX 400
                       SYGGEDNASEYGYGEVSHDKGARSSAVSREKERG               
Sbjct: 512  GEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRD 571

Query: 399  XXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHR 220
                           +EERDGYRDYRQK           RGQ         RA QEEDHR
Sbjct: 572  EREHDRDRHDKEHRYREERDGYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHR 631

Query: 219  SRSRDTNYGKRRRAPSE 169
            SRSRDTNYGKRRRAPSE
Sbjct: 632  SRSRDTNYGKRRRAPSE 648


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  138 bits (347), Expect = 4e-30
 Identities = 85/197 (43%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFFGRG+AAN                  W         
Sbjct: 452  MVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGM-WTDTSMGGWG 510

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                       SYGG+D AS+YGYGEV+H+K  RS+  SREKERG               
Sbjct: 511  GEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRD 570

Query: 396  XXXXXXXXXXXXXN-KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHR 220
                           +EE+DGYRD+RQ+           RGQ         RAV +EDHR
Sbjct: 571  EREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHR 630

Query: 219  SRSRDTNYGKRRRAPSE 169
            SRSRD +YGKRRR PSE
Sbjct: 631  SRSRDGDYGKRRRLPSE 647


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  135 bits (340), Expect = 3e-29
 Identities = 82/200 (41%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFF RG+AAN                  W         
Sbjct: 457  MLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGM-WTDSSMGGWL 515

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                       SYGG+D AS+YGYGE +H+KGARS+A SREK+RG               
Sbjct: 516  GEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHRE 575

Query: 396  XXXXXXXXXXXXXN----KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YRD RQ+           RGQ          A+ +E
Sbjct: 576  EREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDE 635

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
            DHRSRSRD +YGKRRR PSE
Sbjct: 636  DHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  135 bits (339), Expect = 3e-29
 Identities = 82/200 (41%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFF RG+AAN                  W         
Sbjct: 457  MLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGM-WTDSSMGGWV 515

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                       SYGG+D AS+YGYGE SH+KGARS+  SREK+RG               
Sbjct: 516  GEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTASREKDRGSERDWSGNTDRRHRE 575

Query: 396  XXXXXXXXXXXXXN----KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YRD RQ+           RGQ          A+ +E
Sbjct: 576  EREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDE 635

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
            DHRSRSRD +YGKRRR PSE
Sbjct: 636  DHRSRSRDVDYGKRRRLPSE 655


>gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  133 bits (335), Expect = 1e-28
 Identities = 82/201 (40%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+  FPAVN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 431  MLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAGM-WNDPSMGGWG 489

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG-----XXXXXXXXXX 412
                       SYGG+D ASEYGYGE +H+KG RS+A SRE+ERG               
Sbjct: 490  GDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSRERERGSERDWSGNSERRHRD 549

Query: 411  XXXXXXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQE 232
                               KEE+D YRD+RQ+           RGQ         +A+ E
Sbjct: 550  EREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPE 609

Query: 231  EDHRSRSRDTNYGKRRRAPSE 169
            +DHRSRSRD +YGKRRR PSE
Sbjct: 610  DDHRSRSRDVDYGKRRRLPSE 630


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  133 bits (335), Expect = 1e-28
 Identities = 85/200 (42%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 447  MLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGPSGMDGPNAGM-WSDTSMGGWG 505

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                        YGG+D ASEYGYGEV+H+KGARSSA SREKER                
Sbjct: 506  EEPGRRTRESS-YGGDDGASEYGYGEVNHEKGARSSAASREKERASERDWSGNSDRRHRD 564

Query: 396  XXXXXXXXXXXXXN----KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE++ YRD+RQ+           RGQ         RAV EE
Sbjct: 565  DREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEE 624

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
            D+RSRSRD +YGKRRR PSE
Sbjct: 625  DYRSRSRDADYGKRRRLPSE 644


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  133 bits (334), Expect = 1e-28
 Identities = 82/200 (41%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFF RG+AAN                  W         
Sbjct: 460  MLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGM-WTDSSMGGWL 518

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                       SYGG+D AS+YGYGE +H+KGARS+A SREK+RG               
Sbjct: 519  GEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHRE 578

Query: 396  XXXXXXXXXXXXXN----KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YRD RQ+           RG          RA+ +E
Sbjct: 579  EREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDE 638

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
            DHRSRSRD +YGKRRR PSE
Sbjct: 639  DHRSRSRDVDYGKRRRLPSE 658


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  133 bits (334), Expect = 1e-28
 Identities = 82/200 (41%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFF RG+AAN                  W         
Sbjct: 460  MLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGM-WTDSSMGGWV 518

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                       SYGG+D AS+YGYGE +H+KGARS+A SREK+RG               
Sbjct: 519  GEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHRE 578

Query: 396  XXXXXXXXXXXXXN----KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YRD RQ+           RG          RA+ +E
Sbjct: 579  EREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDE 638

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
            DHRSRSRD +YGKRRR PSE
Sbjct: 639  DHRSRSRDVDYGKRRRLPSE 658


>gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708840|gb|EOY00737.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 652

 Score =  124 bits (311), Expect = 6e-26
 Identities = 79/200 (39%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 455  MLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGM-WTDASMGGWG 513

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER----GXXXXXXXXXXX 409
                       SYGGED ASEYGYG+ +H+KG RSS  SREKER                
Sbjct: 514  GDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRD 572

Query: 408  XXXXXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YR++R +           RGQ          A+ EE
Sbjct: 573  EKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEE 632

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
            +HRSRSRD +YGK+RR PSE
Sbjct: 633  EHRSRSRDVDYGKKRRLPSE 652


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  121 bits (304), Expect = 4e-25
 Identities = 79/197 (40%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
 Frame = -2

Query: 756 MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
           M+P FPAVN MGL GVAPHVNPAFF RG+A N                  W         
Sbjct: 442 MLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMVSSGMDGPNPGM-WESS------ 494

Query: 576 XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERG-XXXXXXXXXXXXXX 400
                       Y G++ ASEYGYGE +H+KGARSS  SREKERG               
Sbjct: 495 ------------YDGDEGASEYGYGEGNHEKGARSSGASREKERGSERDWSGNSDRRHRD 542

Query: 399 XXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHR 220
                          KEE+D YR +RQ+           RG          RA  EED+R
Sbjct: 543 EREQDWDRPEREHRYKEEKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYR 602

Query: 219 SRSRDTNYGKRRRAPSE 169
           SR+RD +YGKRRR PSE
Sbjct: 603 SRTRDVDYGKRRRLPSE 619


>gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708838|gb|EOY00735.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 653

 Score =  120 bits (301), Expect = 9e-25
 Identities = 78/200 (39%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN +GL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 456  MLPSFPAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGM-WTDTSMGGWG 514

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER----GXXXXXXXXXXX 409
                       SYGGED ASEYGYG+ +H+KG RSS  SREKER                
Sbjct: 515  GDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSDREWSGNSDRRHRD 573

Query: 408  XXXXXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YR++R +           RGQ          A+ EE
Sbjct: 574  EKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEE 633

Query: 228  DHRSRSRDTNYGKRRRAPSE 169
              RSRSRD +YGKRRR PSE
Sbjct: 634  QRRSRSRDVDYGKRRRLPSE 653


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  119 bits (299), Expect = 2e-24
 Identities = 77/201 (38%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FP VN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 447  MLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMEGHHAPM-WNDPSMAGWT 505

Query: 576  XXXXXXXXXXXSYGGEDNASEYG-YGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXX 400
                       SYGG+D  SEYG YGE +H+K  RSSA  RE+ER               
Sbjct: 506  GEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVRSSAAPRERERESEREWTGTSERRHR 565

Query: 399  XXXXXXXXXXXXXXN----KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQE 232
                               KEE+D YRD+R++           RG          +A+ E
Sbjct: 566  DEREQDWDRSEREHREPRYKEEKDSYRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPE 625

Query: 231  EDHRSRSRDTNYGKRRRAPSE 169
            +DHRSRSRD +YGKRRR PSE
Sbjct: 626  DDHRSRSRDVDYGKRRRLPSE 646


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
           gi|550329195|gb|ERP56065.1| hypothetical protein
           POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  118 bits (296), Expect = 3e-24
 Identities = 78/197 (39%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
 Frame = -2

Query: 756 MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
           M+P FPAVN MGL GVAPHVNPAFF RG+A N                  W         
Sbjct: 397 MLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMASSGMEGPNPGK-WPDTSMGGWG 455

Query: 576 XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER-GXXXXXXXXXXXXXX 400
                       Y G++ ASEYGYGE +H+KGARSS  SREKER                
Sbjct: 456 EEPGRRTRESS-YDGDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRD 514

Query: 399 XXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHR 220
                          +EE+D YR +RQ+           RG          RA  EED+R
Sbjct: 515 EREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYR 574

Query: 219 SRSRDTNYGKRRRAPSE 169
           SRSRD +YGKRRR PSE
Sbjct: 575 SRSRDVDYGKRRRPPSE 591


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  118 bits (295), Expect = 4e-24
 Identities = 78/197 (39%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
 Frame = -2

Query: 756 MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
           M+P FPAVN MGL GVAPHVNPAFF RG+A N                            
Sbjct: 397 MLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMASSGMEGPNPGKE---------- 446

Query: 576 XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER-GXXXXXXXXXXXXXX 400
                      SY G++ ASEYGYGE +H+KGARSS  SREKER                
Sbjct: 447 ----------SSYDGDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRD 496

Query: 399 XXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHR 220
                          +EE+D YR +RQ+           RG          RA  EED+R
Sbjct: 497 EREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYR 556

Query: 219 SRSRDTNYGKRRRAPSE 169
           SRSRD +YGKRRR PSE
Sbjct: 557 SRSRDVDYGKRRRPPSE 573


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  114 bits (286), Expect = 5e-23
 Identities = 75/196 (38%), Positives = 85/196 (43%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MG   VAPHVNPAFFGRG+  N                 MW         
Sbjct: 446  MLPSFPAVNTMGFAAVAPHVNPAFFGRGMT-NNGMGMVGSSLMDGHQGGMWNDPSIGGWG 504

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXX 397
                       SYGG+D ASEYGYG+ +H+KG R     R  ER                
Sbjct: 505  GEEHGRRTRESSYGGDDGASEYGYGDTNHEKGGRE----RGSERDWSGNSERRNHEERDQ 560

Query: 396  XXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHRS 217
                          +E +DG RDYR K           RGQ         R VQE+ HRS
Sbjct: 561  DWDRSQKEQKEHRYREGKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRS 620

Query: 216  RSRDTNYGKRRRAPSE 169
            RSRD +YGKRRR PSE
Sbjct: 621  RSRDVDYGKRRRLPSE 636


>gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  110 bits (276), Expect = 7e-22
 Identities = 74/203 (36%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P FPAVN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 455  MLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGM-WTDASMGGWG 513

Query: 576  XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER----GXXXXXXXXXXX 409
                       SYGGED ASEYGYG+ +H+KG RSS  SREKER                
Sbjct: 514  GDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRD 572

Query: 408  XXXXXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEE 229
                              +EE+D YR++R +           RGQ          A+ EE
Sbjct: 573  EKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEE 632

Query: 228  DHRSRSRDTNYGKRRRAPSE*SH 160
            +HRSRSRD  Y + + +  E  H
Sbjct: 633  EHRSRSRDVGYREEKDSYREHRH 655


>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
            gi|548855834|gb|ERN13697.1| hypothetical protein
            AMTR_s00049p00146760 [Amborella trichopoda]
          Length = 659

 Score =  104 bits (260), Expect = 5e-20
 Identities = 68/198 (34%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
 Frame = -2

Query: 756  MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
            M+P F  +  +GLPGVAPHVNPAFFGRG++AN                  W         
Sbjct: 465  MLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGAMDGHHGGM-WGDSSMGGGV 523

Query: 576  XXXXXXXXXXXSYG--GEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXX 403
                            G+D AS+YGYG+  H++G   S   REK+RG             
Sbjct: 524  GWGNEEHGRRTRESSYGDDGASDYGYGDGGHERGGGRSNPGREKDRGSERDWSSGPERRH 583

Query: 402  XXXXXXXXXXXXXXXNKEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDH 223
                            K+E+DGY D+RQ+           RG+         R +QEED 
Sbjct: 584  RDDRDSDWDRDPRY--KDEKDGYSDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQ 641

Query: 222  RSRSRDTNYGKRRRAPSE 169
            RSRS+D +YGKRRR PSE
Sbjct: 642  RSRSKDVDYGKRRRVPSE 659


>emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]
          Length = 168

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 56/125 (44%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
 Frame = -2

Query: 540 YGGEDNASEYGYGEVSHDKGARSSAVSREKERGXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
           YGG+D AS+YGYGEV+H+K  RS+  SREKERG                           
Sbjct: 44  YGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKD 103

Query: 360 XN-KEERDGYRDYRQKXXXXXXXXXXXRGQXXXXXXXXXRAVQEEDHRSRSRDTNYGKRR 184
              +EE+DGYRD+RQ+           RGQ         RAV +EDHRSRSRD +YGKRR
Sbjct: 104 HRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 163

Query: 183 RAPSE 169
           R PSE
Sbjct: 164 RLPSE 168


>gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao]
          Length = 602

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 52/104 (50%), Positives = 57/104 (54%)
 Frame = -2

Query: 756 MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
           M+P FPAVN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 455 MLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGM-WTDASMGGWG 513

Query: 576 XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER 445
                      SYGGED ASEYGYG+ +H+KG RSS  SREKER
Sbjct: 514 GDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASREKER 556


>gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao]
          Length = 697

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 52/104 (50%), Positives = 57/104 (54%)
 Frame = -2

Query: 756 MMPPFPAVNPMGLPGVAPHVNPAFFGRGIAANXXXXXXXXXXXXXXXXXMWXXXXXXXXX 577
           M+P FPAVN MGL GVAPHVNPAFFGRG+A N                  W         
Sbjct: 455 MLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGM-WTDASMGGWG 513

Query: 576 XXXXXXXXXXXSYGGEDNASEYGYGEVSHDKGARSSAVSREKER 445
                      SYGGED ASEYGYG+ +H+KG RSS  SREKER
Sbjct: 514 GDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASREKER 556