BLASTX nr result
ID: Atropa21_contig00023596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023596
(490 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 48 4e-12
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 48 1e-11
gb|AAP55181.2| retrotransposon protein, putative, unclassified [... 50 1e-11
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group] 48 1e-10
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group] 48 1e-10
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 46 2e-10
gb|AAX95101.1| retrotransposon protein, putative, unclassified [... 49 3e-10
gb|ABA96448.2| retrotransposon protein, putative, unclassified, ... 46 4e-10
gb|AAX95863.1| retrotransposon protein, putative, unclassified [... 51 2e-09
gb|ABA96179.1| retrotransposon protein, putative, unclassified [... 48 2e-09
emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group] 45 4e-09
gb|ABA94476.1| retrotransposon protein, putative, unclassified [... 50 7e-09
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 43 1e-08
dbj|BAK02119.1| predicted protein [Hordeum vulgare subsp. vulgare] 45 2e-08
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g... 47 2e-08
gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Jap... 43 2e-08
gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Ja... 43 2e-08
gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyp... 44 3e-08
ref|XP_006658597.1| PREDICTED: uncharacterized protein LOC102707... 45 7e-08
gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indi... 42 9e-08
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 48.1 bits (113), Expect(2) = 4e-12
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 43 WTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSLH 222
W M F RVLPLG YD +L M+W + F+P+ ++ + F G+++ L+G L
Sbjct: 485 WWMQGNQFCNSFRVLPLGNYDIILGMDWLELFSPMQVDWANKWMEFLYQGKLVRLQGILP 544
Query: 223 KPKVWNDVEDNSMKLLHK-GSSCCLVQL 303
K + + ++ + L++ GS LVQL
Sbjct: 545 KSVQCSSITNHQLCGLNRLGSLSYLVQL 572
Score = 48.1 bits (113), Expect(2) = 4e-12
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 359 ITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
I HD+F EP+ +P R C H+I + GA+P N RPYR++
Sbjct: 591 IQDFHDIFQEPEGLPPRRACDHTINLIPGAKPINLRPYRHN 631
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 48.1 bits (113), Expect(2) = 1e-11
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSL 219
KW + F ++LPL YD +L M+W ++++P+ + + I F + + LKG +
Sbjct: 1872 KWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQAKTIQFGLHDKSVELKGVV 1931
Query: 220 HKPKVWNDVEDNSMKLLH-KGSSCCLVQLCNDSVSNI*EEIP 342
+ + V + ++LLH +G+ LVQL S+ + +P
Sbjct: 1932 PELDKCDLVSIHQLQLLHNQGAVESLVQLTASDGSSSSQNVP 1973
Score = 47.0 bits (110), Expect(2) = 1e-11
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
Q + D+F+EP +P R H+I ++GAQP N RPYRY+ DQ
Sbjct: 1977 QSILDEFADIFNEPDGLPPSRSYDHTIPLIAGAQPVNIRPYRYTPDQ 2023
>gb|AAP55181.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1459
Score = 50.1 bits (118), Expect(2) = 1e-11
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +1
Query: 31 ADFKWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLK 210
A+ KW M F R+L LGGYD +L M+W ++F+P+ ++ + + + + + L+
Sbjct: 674 ANCKWWMQGHSFSSNFRLLNLGGYDIILGMDWLEQFSPMQVDWSQKWMEIQVNNQPVRLQ 733
Query: 211 GSLHKPKVWNDVE-DNSMKLLHKGSSCCLVQLCNDSVSNI*EEIP 342
G + N + + + + KGS LVQL SVS I + +P
Sbjct: 734 GITSQTNSCNAISAEQCLGMARKGSILYLVQL-TSSVSEICDTMP 777
Score = 44.7 bits (104), Expect(2) = 1e-11
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 374 DVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
DVF EP ++P RYC HSI + A P N RPYR++
Sbjct: 789 DVFSEPTELPPKRYCDHSIPLVPVATPVNLRPYRFN 824
>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 48.1 bits (113), Expect(2) = 1e-10
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 GQFTYSTEW*ADFKWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITF 180
G Y T KW + F ++LPL YD +L M+W ++++P+ + + I F
Sbjct: 545 GTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQAKTIQF 604
Query: 181 KKDGRIITLKGSLHKPKVWNDVEDNSMKLLH-KGSSCCLVQLCNDSVSNI*EEIP 342
+ + LKG + + + V + ++LLH +G+ LVQL S+ + +P
Sbjct: 605 CLHDKSVELKGVVPELDKCDLVSIHQLQLLHNQGAVESLVQLTASDGSSSSQNVP 659
Score = 43.1 bits (100), Expect(2) = 1e-10
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
Q + D+F EP+ +P R H+I ++GAQ N RPYRY+ DQ
Sbjct: 663 QSILDEFADIFTEPEGLPPSRSYDHTIPLIAGAQLVNIRPYRYTPDQ 709
>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
Length = 1265
Score = 48.1 bits (113), Expect(2) = 1e-10
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 GQFTYSTEW*ADFKWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITF 180
G Y T KW + F ++LPL YD +L M+W ++++P+ + + I F
Sbjct: 494 GTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQAKTIQF 553
Query: 181 KKDGRIITLKGSLHKPKVWNDVEDNSMKLLH-KGSSCCLVQLCNDSVSNI*EEIP 342
+ + LKG + + + V + ++LLH +G+ LVQL S+ + +P
Sbjct: 554 CLHDKSVELKGVVPELDKCDLVSIHQLQLLHNQGAVESLVQLTASDGSSSSQNVP 608
Score = 43.1 bits (100), Expect(2) = 1e-10
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
Q + D+F EP+ +P R H+I ++GAQ N RPYRY+ DQ
Sbjct: 612 QSILDEFADIFTEPEGLPPSRSYDHTIPLIAGAQLVNIRPYRYTPDQ 658
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 46.2 bits (108), Expect(2) = 2e-10
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 43 WTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSLH 222
W F R+LPLG YD +L M+W ++F+P+ ++ I F+ G+ + L+G
Sbjct: 502 WWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDWVHKWIAFQHHGQAVQLQGIHP 561
Query: 223 KPKVWNDVEDNSMK-LLHKGSSCCLVQL 303
+ + ++ ++ + KG+ CLV L
Sbjct: 562 QLSTCFPISNDQLQGMSKKGAVMCLVHL 589
Score = 44.3 bits (103), Expect(2) = 2e-10
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRY 478
Q + ++F EP ++P R C H I + GA+P N RPYRY
Sbjct: 605 QPILNEFQEIFSEPTELPPKRNCDHHIPLVEGAKPVNLRPYRY 647
>gb|AAX95101.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77548872|gb|ABA91669.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1314
Score = 48.9 bits (115), Expect(2) = 3e-10
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 49 MYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSLHKP 228
M E F P++VLPLG Y+ +L M+W +R +P+ ++ + + F+ R +TL+G +
Sbjct: 321 MPGESFSTPLKVLPLGCYEVILGMDWLERHSPMQIDWKLKTLQFQWQNRQVTLQGVIPDT 380
Query: 229 KVWNDVEDNSMK-LLHKGSSCCLVQLC 306
V N +K LLH V LC
Sbjct: 381 SDCPPVTCNQLKGLLHHNVVLQAVALC 407
Score = 41.2 bits (95), Expect(2) = 3e-10
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +2
Query: 377 VFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
VFDEP +P R HSI L GA P N RPY Y+ Q
Sbjct: 434 VFDEPTGLPPSRVFDHSIPLLPGASPVNLRPYHYNPAQ 471
>gb|ABA96448.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|215767578|dbj|BAG99806.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 649
Score = 45.8 bits (107), Expect(2) = 4e-10
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
Q+ I ++F EP+ +P R C H IT + GA+P N RPYR++
Sbjct: 158 QHIIQDYKEIFQEPEGLPPRRTCDHIITLVPGAKPINLRPYRHN 201
Score = 43.9 bits (102), Expect(2) = 4e-10
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSL 219
KW M F R+LPLG YD +L M+W + +P+ ++ + F G I ++G L
Sbjct: 54 KWWMQGYQFCNNFRMLPLGNYDIILGMDWLESISPMQVDWANKWMEFNHQGASIRVQGLL 113
Query: 220 HKPKVWNDVEDNSMK-LLHKGSSCCLVQL 303
P + V + + + +GS LVQL
Sbjct: 114 STPVQCSPVTCHQLNGMSRRGSLSYLVQL 142
>gb|AAX95863.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1126
Score = 51.2 bits (121), Expect(2) = 2e-09
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 43 WTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSLH 222
W F ++VL LGGYD +L M+W + F+P+ + + + F G+ ITL G
Sbjct: 506 WWCQGHSFTSDLKVLQLGGYDVILGMDWLEHFSPMWINWQRKKLRFTYQGKRITLTGVKE 565
Query: 223 KPKVWNDVEDNSMKLLHKGSSCC-LVQLCNDSVSNI*EEIPP 345
V +K + K + +VQLC+ E++PP
Sbjct: 566 NLSDCKSVTAKQLKGMFKSRAIAQVVQLCSIEEIETNEQLPP 607
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 374 DVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
D F EP ++P R H+I + A+P N +PYRY+ Q
Sbjct: 618 DQFQEPSRLPPHRDFDHNIPLMPNAKPVNAKPYRYAPKQ 656
>gb|ABA96179.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 770
Score = 48.1 bits (113), Expect(2) = 2e-09
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
Q + + DV EPK +P R C H I + GAQP N RPYRY+
Sbjct: 325 QQVLQSYQDVLAEPKNLPPRRNCDHKIPLIEGAQPVNLRPYRYN 368
Score = 38.9 bits (89), Expect(2) = 2e-09
Identities = 23/102 (22%), Positives = 49/102 (48%)
Frame = +1
Query: 43 WTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSLH 222
W M F+ +++PLG YD +L M+W + +P+ ++ + F+ ++I L G
Sbjct: 222 WCMQGHSFKNDFKLIPLGSYDIILGMDWLQQHSPMQIDWIQKWVEFQYQNQLIRLHGIKK 281
Query: 223 KPKVWNDVEDNSMKLLHKGSSCCLVQLCNDSVSNI*EEIPPP 348
+ + ++ + +L+ S ++ L + + EE P P
Sbjct: 282 QSSTYANI--SIEQLVGMAKSGAIMYLVKIAETTHEEEFPIP 321
>emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
Length = 1817
Score = 45.4 bits (106), Expect(2) = 4e-09
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
Q I + VF EP +P RYC H+I + GA P N RPYR++
Sbjct: 763 QQLIDSFQAVFAEPNGLPPKRYCDHTIPLVPGAAPVNLRPYRFN 806
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILE--TRPLDITFKKDGRIITLKG 213
+W M F R+L LGGYD +L M+W ++F+P+ + + +DIT G+ + L+G
Sbjct: 659 RWWMQGHNFINNFRLLNLGGYDIILGMDWLEQFSPMQVNWVDKWMDITI--SGQPVRLQG 716
Query: 214 SLHKPKVWNDVE-DNSMKLLHKGSSCCLVQL 303
+ + + + + + ++ +GS LVQL
Sbjct: 717 IVSQVSHCSPISTEQCLGMVRQGSLMYLVQL 747
>gb|ABA94476.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 50.4 bits (119), Expect(2) = 7e-09
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +1
Query: 34 DFKWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKG 213
D W + E F ++VLPLG YD +L M+W ++ +P+ ++ R + F + + I LKG
Sbjct: 466 DCLWLVQGESFLTSLKVLPLGNYDVILGMDWLEQHSPMKVDWRAKTLQFHYNQKEICLKG 525
Query: 214 SLHKPKVWNDVEDNSMK-LLHKGSSCCLVQLCNDSVSNI*EEIP 342
+ + ++ L+H+ + +V+LC+ ++ +IP
Sbjct: 526 VTANTQTCKTLSATQVQGLVHRSAVLQVVELCSVELAIKDSDIP 569
Score = 35.0 bits (79), Expect(2) = 7e-09
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 377 VFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
+F+EPK +P +R HSI L A+P N YRY+
Sbjct: 582 IFEEPKGLPPIRAFDHSIPLLPEAKPVNLCRYRYN 616
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 42.7 bits (99), Expect(2) = 1e-08
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 58 ELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSLHKPK-V 234
E F ++PL GYD +L +W +++PI L+ + ++ K + + ++ K +
Sbjct: 555 ETFSNKFNIIPLKGYDVILGADWIYKYSPITLDLKKRELGITKGEKTVVIQDFTRPGKHL 614
Query: 235 WNDVEDNSMKLLHKGSSCCLVQLCNDSVSNI*EEIP 342
W D + ++L KG CL Q+ EIP
Sbjct: 615 WVDSKKVD-QILRKGGLGCLFQITRVKEEETSHEIP 649
Score = 42.0 bits (97), Expect(2) = 1e-08
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2
Query: 377 VFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
V +PK +P R C H IT SGA+P N RPYR H Q
Sbjct: 662 VLKDPKGLPPRRNCDHVITLKSGAEPPNLRPYRVPHYQ 699
>dbj|BAK02119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 45.4 bits (106), Expect(2) = 2e-08
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Frame = +1
Query: 43 WTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKG--- 213
W + F +RVL LG YD VL M+W R +P+ I+F+ +G+++ L+G
Sbjct: 112 WQVPGHTFHTDLRVLELGAYDGVLGMDWLSRHSPMNCHWLEKTISFQTEGKVVQLQGIRS 171
Query: 214 ------------SLHKPKVWNDV 246
LH+ +V ND+
Sbjct: 172 SDLPPISKLDTYKLHRMEVANDI 194
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +2
Query: 290 VWYSCAMIQYQIYKKRYHPH----QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPF 457
+W + + ++K+ P Q + +VF EP +P R H + GA P
Sbjct: 194 IWTAALVTVTPVHKEAAEPVPPQIQKVLKEFEEVFAEPTTLPPHRQYDHGLNLEPGATPI 253
Query: 458 NFRPYRYSHDQ 490
N RPYRYS Q
Sbjct: 254 NTRPYRYSPAQ 264
>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza
sativa Japonica Group]
Length = 1629
Score = 47.0 bits (110), Expect(2) = 2e-08
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
Q +T VFDEPK +P +R H+I L GA P N RPYRY+
Sbjct: 645 QTVLTEFSSVFDEPKGLPPIRQFDHTIPLLPGAGPVNVRPYRYT 688
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSL 219
+WT+ +F ++VL L YD +L M+W + +P+ ++ + G I L G
Sbjct: 540 EWTIQGHVFFTNLKVLELNNYDMILGMDWLMQHSPMTVDWTTKSLIIAYAGTQIQLYGVR 599
Query: 220 HKPKVWNDVEDNSMKLLHKGSSCC-LVQLCNDSVSNI*EEIP 342
+ + ++ L+ ++ LVQ C+ E+IP
Sbjct: 600 SDTEQCAHISSKQLRELNDRTAVSNLVQFCSVFALEYQEQIP 641
>gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1065
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILE--TRPLDITFKKDGRIITLKG 213
+W +F ++VL LG YD +L M+W +P+ ++ + L ++++K+ ITL+G
Sbjct: 538 EWMTQGWVFYTDLKVLNLGSYDMILGMDWLMAHSPMQVDWVNKLLTVSWRKES--ITLQG 595
Query: 214 SLHKPKVWNDVEDNS-MKLLHKGSSCCLVQLCNDSVSNI*EEIP 342
L + + + + ++L + + L+QLC S S+ E+IP
Sbjct: 596 ILSETEQCSQLSSQQFLELKDRQAISHLIQLCTLSESSNKEQIP 639
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
Q + VF+EP +P R H+I + GA P N RPYRY+ Q
Sbjct: 643 QQVLAEFGQVFEEPSGLPPSRVFDHTIPPMPGATPVNVRPYRYTPAQ 689
>gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 954
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILE--TRPLDITFKKDGRIITLKG 213
+W +F ++VL LG YD +L M+W +P+ ++ + L ++++K+ ITL+G
Sbjct: 474 EWMTQGWVFYTDLKVLNLGSYDMILGMDWLMAHSPMQVDWVNKLLTVSWRKES--ITLQG 531
Query: 214 SLHKPKVWNDVEDNS-MKLLHKGSSCCLVQLCNDSVSNI*EEIP 342
L + + + + ++L + + L+QLC S S+ E+IP
Sbjct: 532 ILSETEQCSQLSSQQFLELKDRQAISHLIQLCTLSESSNKEQIP 575
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYSHDQ 490
Q + VF+EP +P R H+I + GA P N RPYRY+ Q
Sbjct: 579 QQVLAEFGQVFEEPSGLPPSRVFDHTIPPMPGATPVNVRPYRYTPAQ 625
>gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyprotein [Oryza sativa
Japonica Group] gi|108706267|gb|ABF94062.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 624
Score = 43.9 bits (102), Expect(2) = 3e-08
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 350 QYFITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
Q +T DVF +PK +P R H+I+ + A P N+RPYRYS
Sbjct: 367 QQLLTDFDDVFHDPKCLPPHRVFDHAISLVPDATPVNYRPYRYS 410
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +1
Query: 37 FKWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGS 216
F W + F + MRV+ LGG+D +L M+W +++ + + F+ G I+L+G
Sbjct: 260 FFWWIQGHTFTYDMRVVTLGGHDAILGMDWLEQWGEMSCHWANKTLKFQYQGSWISLQG- 318
Query: 217 LHKPKVWNDVEDNSMKLL---HKGSSCCLVQLCNDSVSNI*EEIP 342
+ V +++ ++ L HKG L S ++ IP
Sbjct: 319 VQDAAVPSEIAAVTLPQLLKWHKGCEIWAAALLEHSQDDVQHVIP 363
>ref|XP_006658597.1| PREDICTED: uncharacterized protein LOC102707790 [Oryza brachyantha]
Length = 714
Score = 45.4 bits (106), Expect(2) = 7e-08
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 359 ITTIHDVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
++ VF+EPK++P R C H I L G++P + RPYRY+
Sbjct: 672 LSEFQSVFEEPKELPPRRLCDHQIPLLPGSKPVSIRPYRYN 712
Score = 36.6 bits (83), Expect(2) = 7e-08
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +1
Query: 40 KWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGSL 219
+W + FQ +VLPL GYD +L M+W + + + + F +I ++G
Sbjct: 565 EWWLQGHQFQNDFKVLPLSGYDAILGMDWLHQMGQMTVNWEEQWMQFLWHEGVINIRGIQ 624
Query: 220 HKPKVWNDVEDNSMKLLHK-GSSCCLVQLCNDSV 318
+ + + +K L+K G+ +VQL SV
Sbjct: 625 ARTDKCDQISYLQLKGLNKMGALMHMVQLSAVSV 658
>gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
Length = 471
Score = 42.4 bits (98), Expect(2) = 9e-08
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Frame = +1
Query: 37 FKWTMYDELFQFPMRVLPLGGYDKVL*MNWFDRFTPIILETRPLDITFKKDGRIITLKGS 216
F W F + MRV+PLGG+D +L M+W ++ + + F G + L+G
Sbjct: 104 FTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNWAKKTLKFMYQGTWVELQGV 163
Query: 217 LHKPKVWNDVEDNSMKL-----LHKGSSCCLVQLCNDSVSNI*EEIPP 345
P + + ++M L HKG + L + S + +PP
Sbjct: 164 PDSP---SKTKLSAMSLSQVLKCHKGCDIWVAALLETADSPSSDSVPP 208
Score = 39.3 bits (90), Expect(2) = 9e-08
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 374 DVFDEPKKVPLLRYCGHSITSLSGAQPFNFRPYRYS 481
DVF +P +P R H+IT G+ P N +PYRYS
Sbjct: 219 DVFQDPHSLPPHRVYDHAITLFPGSAPVNSKPYRYS 254