BLASTX nr result
ID: Atropa21_contig00023120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023120
(1026 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245861.1| PREDICTED: RNA-binding protein 5-like [Solan... 106 1e-20
ref|XP_006358599.1| PREDICTED: RNA-binding protein 5-A-like isof... 105 3e-20
ref|XP_006358598.1| PREDICTED: RNA-binding protein 5-A-like isof... 105 3e-20
ref|XP_006358597.1| PREDICTED: RNA-binding protein 5-A-like isof... 105 3e-20
ref|XP_006358595.1| PREDICTED: RNA-binding protein 5-A-like isof... 105 3e-20
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 96 2e-17
ref|XP_006858686.1| hypothetical protein AMTR_s00066p00089100 [A... 96 3e-17
ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Popu... 95 5e-17
ref|XP_006481941.1| PREDICTED: RNA-binding protein 5-like isofor... 94 1e-16
ref|XP_006481940.1| PREDICTED: RNA-binding protein 5-like isofor... 94 1e-16
ref|XP_006430377.1| hypothetical protein CICLE_v10010959mg [Citr... 94 1e-16
ref|XP_006430371.1| hypothetical protein CICLE_v10010959mg [Citr... 94 1e-16
ref|XP_006430366.1| hypothetical protein CICLE_v10010959mg [Citr... 94 1e-16
ref|XP_006430363.1| hypothetical protein CICLE_v10010959mg [Citr... 94 1e-16
ref|XP_006372488.1| zinc finger family protein [Populus trichoca... 94 1e-16
ref|XP_002327561.1| predicted protein [Populus trichocarpa] 94 1e-16
gb|EXB86754.1| RNA-binding protein 5 [Morus notabilis] 93 1e-16
ref|XP_002301651.1| predicted protein [Populus trichocarpa] 93 1e-16
gb|ESW28276.1| hypothetical protein PHAVU_003G273500g [Phaseolus... 93 2e-16
ref|XP_004306470.1| PREDICTED: uncharacterized protein LOC101301... 93 2e-16
>ref|XP_004245861.1| PREDICTED: RNA-binding protein 5-like [Solanum lycopersicum]
Length = 1010
Score = 106 bits (265), Expect = 1e-20
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGMVEPVQAQ+TGHRAGLGSQ K VDP LE QSGDSYKTLIQKKAIARFREM
Sbjct: 951 GLGKDGSGMVEPVQAQSTGHRAGLGSQQSKKVDPNLEAQSGDSYKTLIQKKAIARFREM 1009
>ref|XP_006358599.1| PREDICTED: RNA-binding protein 5-A-like isoform X5 [Solanum
tuberosum]
Length = 1008
Score = 105 bits (262), Expect = 3e-20
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGMVEPVQAQ+TGHRAGLGSQ KK VDP LE QSGDSYKTLIQKKAIARFREM
Sbjct: 951 GLGKDGSGMVEPVQAQSTGHRAGLGSQSKK-VDPTLEAQSGDSYKTLIQKKAIARFREM 1008
>ref|XP_006358598.1| PREDICTED: RNA-binding protein 5-A-like isoform X4 [Solanum
tuberosum]
Length = 1036
Score = 105 bits (262), Expect = 3e-20
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGMVEPVQAQ+TGHRAGLGSQ KK VDP LE QSGDSYKTLIQKKAIARFREM
Sbjct: 979 GLGKDGSGMVEPVQAQSTGHRAGLGSQSKK-VDPTLEAQSGDSYKTLIQKKAIARFREM 1036
>ref|XP_006358597.1| PREDICTED: RNA-binding protein 5-A-like isoform X3 [Solanum
tuberosum]
Length = 1044
Score = 105 bits (262), Expect = 3e-20
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGMVEPVQAQ+TGHRAGLGSQ KK VDP LE QSGDSYKTLIQKKAIARFREM
Sbjct: 987 GLGKDGSGMVEPVQAQSTGHRAGLGSQSKK-VDPTLEAQSGDSYKTLIQKKAIARFREM 1044
>ref|XP_006358595.1| PREDICTED: RNA-binding protein 5-A-like isoform X1 [Solanum
tuberosum] gi|565385404|ref|XP_006358596.1| PREDICTED:
RNA-binding protein 5-A-like isoform X2 [Solanum
tuberosum]
Length = 1045
Score = 105 bits (262), Expect = 3e-20
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGMVEPVQAQ+TGHRAGLGSQ KK VDP LE QSGDSYKTLIQKKAIARFREM
Sbjct: 988 GLGKDGSGMVEPVQAQSTGHRAGLGSQSKK-VDPTLEAQSGDSYKTLIQKKAIARFREM 1045
>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
[Ricinus communis]
Length = 962
Score = 96.3 bits (238), Expect = 2e-17
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ T RAGLGSQ KK+ DP+LEVQ+GDSYKTLIQKKA+ARFREM
Sbjct: 901 GLGKDGSGMIEPVQAQATEKRAGLGSQQKKL-DPSLEVQAGDSYKTLIQKKALARFREM 958
>ref|XP_006858686.1| hypothetical protein AMTR_s00066p00089100 [Amborella trichopoda]
gi|548862797|gb|ERN20153.1| hypothetical protein
AMTR_s00066p00089100 [Amborella trichopoda]
Length = 1049
Score = 95.5 bits (236), Expect = 3e-17
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSG++EPVQAQ TG RAGLGSQ +K +DP E QSGD+Y+T+IQKKAIARFREM
Sbjct: 990 GLGKDGSGIIEPVQAQGTGERAGLGSQQRKPLDPRFEPQSGDTYRTVIQKKAIARFREM 1048
>ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Populus trichocarpa]
gi|550340573|gb|EEE86409.2| hypothetical protein
POPTR_0004s08000g [Populus trichocarpa]
Length = 948
Score = 94.7 bits (234), Expect = 5e-17
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KK+ DP+LEVQ+GDSYKTLIQKKA+ARFREM
Sbjct: 890 GLGKDGSGMIEPVQAQAIDRRAGLGSQQKKL-DPSLEVQAGDSYKTLIQKKALARFREM 947
>ref|XP_006481941.1| PREDICTED: RNA-binding protein 5-like isoform X2 [Citrus sinensis]
Length = 1046
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KKV DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 988 GLGKDGSGMIEPVQAQAMDSRAGLGSQQKKV-DPSLEVQAGDSYKTLIHKKALARFREM 1045
>ref|XP_006481940.1| PREDICTED: RNA-binding protein 5-like isoform X1 [Citrus sinensis]
Length = 1047
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KKV DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 989 GLGKDGSGMIEPVQAQAMDSRAGLGSQQKKV-DPSLEVQAGDSYKTLIHKKALARFREM 1046
>ref|XP_006430377.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|567875587|ref|XP_006430383.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|567875591|ref|XP_006430385.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532434|gb|ESR43617.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532440|gb|ESR43623.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532442|gb|ESR43625.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 948
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KKV DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 890 GLGKDGSGMIEPVQAQAMDSRAGLGSQQKKV-DPSLEVQAGDSYKTLIHKKALARFREM 947
>ref|XP_006430371.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|567875569|ref|XP_006430374.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532428|gb|ESR43611.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532431|gb|ESR43614.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 1049
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KKV DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 991 GLGKDGSGMIEPVQAQAMDSRAGLGSQQKKV-DPSLEVQAGDSYKTLIHKKALARFREM 1048
>ref|XP_006430366.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|557532423|gb|ESR43606.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 1048
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KKV DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 990 GLGKDGSGMIEPVQAQAMDSRAGLGSQQKKV-DPSLEVQAGDSYKTLIHKKALARFREM 1047
>ref|XP_006430363.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|567875581|ref|XP_006430380.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|567875593|ref|XP_006430386.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|567875599|ref|XP_006430389.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532420|gb|ESR43603.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532437|gb|ESR43620.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532443|gb|ESR43626.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532446|gb|ESR43629.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 949
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ RAGLGSQ KKV DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 891 GLGKDGSGMIEPVQAQAMDSRAGLGSQQKKV-DPSLEVQAGDSYKTLIHKKALARFREM 948
>ref|XP_006372488.1| zinc finger family protein [Populus trichocarpa]
gi|550319114|gb|ERP50285.1| zinc finger family protein
[Populus trichocarpa]
Length = 988
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDG GMVEPVQAQ RAGLGSQ KK+ DP+LEVQ+GDSYKTLIQKKA+ARFREM
Sbjct: 931 GLGKDGGGMVEPVQAQAIDRRAGLGSQQKKL-DPSLEVQAGDSYKTLIQKKALARFREM 988
>ref|XP_002327561.1| predicted protein [Populus trichocarpa]
Length = 988
Score = 93.6 bits (231), Expect = 1e-16
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDG GMVEPVQAQ RAGLGSQ KK+ DP+LEVQ+GDSYKTLIQKKA+ARFREM
Sbjct: 931 GLGKDGGGMVEPVQAQAIDRRAGLGSQQKKL-DPSLEVQAGDSYKTLIQKKALARFREM 988
>gb|EXB86754.1| RNA-binding protein 5 [Morus notabilis]
Length = 1069
Score = 93.2 bits (230), Expect = 1e-16
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPVQAQ + RAGLGS +K +DP+LEVQ+GDSYKTLI KKA+ARFREM
Sbjct: 1010 GLGKDGSGMIEPVQAQASDSRAGLGSSRQKKLDPSLEVQAGDSYKTLIHKKALARFREM 1068
>ref|XP_002301651.1| predicted protein [Populus trichocarpa]
Length = 463
Score = 93.2 bits (230), Expect = 1e-16
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDG GM+EPVQAQ RAGLGSQ KK+ DP+LEVQ+GDSYKTLIQKKA+ARFREM
Sbjct: 406 GLGKDGGGMIEPVQAQAIDRRAGLGSQQKKL-DPSLEVQAGDSYKTLIQKKALARFREM 463
>gb|ESW28276.1| hypothetical protein PHAVU_003G273500g [Phaseolus vulgaris]
Length = 1072
Score = 92.8 bits (229), Expect = 2e-16
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLGKDGSGM+EPV AQ T HRAGLGSQ KK +DP+LEVQ+GDSYK LI KKA+ARFREM
Sbjct: 1012 GLGKDGSGMIEPVLAQATEHRAGLGSQQKK-LDPSLEVQAGDSYKMLIHKKALARFREM 1069
>ref|XP_004306470.1| PREDICTED: uncharacterized protein LOC101301612 [Fragaria vesca
subsp. vesca]
Length = 1062
Score = 92.8 bits (229), Expect = 2e-16
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = +2
Query: 596 GLGKDGSGMVEPVQAQNTGHRAGLGSQPKKVVDPALEVQSGDSYKTLIQKKAIARFREM 772
GLG+DGSGMVEPVQAQ+ RAGLGSQ KK+ DPALE Q+GDSYKTLI KKA+ARFREM
Sbjct: 1004 GLGRDGSGMVEPVQAQSVERRAGLGSQQKKL-DPALEAQAGDSYKTLIHKKALARFREM 1061