BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00022242
         (2631 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]     249   e-136
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...   249   e-136
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]         248   e-136
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...   248   e-136
gb|ABF93543.1| retrotransposon protein, putative, unclassified [...   248   e-136
gb|ABF94836.1| retrotransposon protein, putative, unclassified [...   248   e-136
emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]        248   e-135
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                244   e-135
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    244   e-134
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]         242   e-134
emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]         233   e-133
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  243   e-133
gb|AEJ07944.1| Opie1 putative pol protein [Zea diploperennis]         239   e-131
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      232   e-130
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      232   e-130
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      231   e-129
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      229   e-129
gb|ABA91220.1| retrotransposon protein, putative, unclassified [...   218   e-128
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      228   e-128
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      230   e-128

>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score =  249 bits (635), Expect(3) = e-136
 Identities = 128/242 (52%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT + L  DE    V++  YR +IGSLLYLT SRPDI FS+ LCARFQ+SP+ 
Sbjct: 1552 KPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRT 1611

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADA---GYLVDMKITFGMTHFLGSCL 1142
            SH +A KRI RY+K T +  ++Y       +  ++DA   G  +D K T G  HFLG+ L
Sbjct: 1612 SHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSL 1671

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLW-IKQLEDFSVLTDGVPLLCDNTSALNMA 965
            +S  ++K++ VA STAEAEYVAAAS C+Q+LW I  L+D+ +   GVPLLCDNTSA+N+A
Sbjct: 1672 VSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIA 1731

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            KN VQH RTKHI++++HFLRDN+EKG I ++F ++E Q+ DIFTK + R  FE    ELG
Sbjct: 1732 KNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELG 1791

Query: 784  LI 779
            +I
Sbjct: 1792 VI 1793



 Score =  201 bits (512), Expect(3) = e-136
 Identities = 104/189 (55%), Positives = 135/189 (71%)
 Frame = -1

Query: 2334 TRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLDIIV 2155
            TR+++  + + + F++  +PK +  AL D + + +M EEL  FE N+   LV  PL   V
Sbjct: 1272 TRNRSYELVN-SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFSV 1330

Query: 2154 IVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFASHV 1975
            I T+WVF NKL E    +RNKARLV QG+ + EG+D++ETFAPVAR+EAIRIL+AFA+  
Sbjct: 1331 IGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASK 1390

Query: 1974 EFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWYERL 1795
             FKLFQM+VKSAFLNG ++E V++KQPP FE+ K   HVFK DKA Y LKQ P AWYERL
Sbjct: 1391 GFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERL 1450

Query: 1794 SKFFLENGF 1768
              F L+NGF
Sbjct: 1451 KTFLLQNGF 1459



 Score = 87.0 bits (214), Expect(3) = e-136
 Identities = 43/98 (43%), Positives = 63/98 (64%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            ++F L+   +   +  TLF    G + L+VQ+YV+DIIFG ++  L  +F  +M  EF+M
Sbjct: 1451 KTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFFDVMSREFEM 1510

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEM 1500
            S+MGEL FFL L +K T +   + Q KY KELLK+F+M
Sbjct: 1511 SMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDM 1548


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score =  249 bits (635), Expect(3) = e-136
 Identities = 128/242 (52%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT + L  DE    V++  YR +IGSLLYLT SRPDI FS+ LCARFQ+SP+ 
Sbjct: 1548 KPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRT 1607

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADA---GYLVDMKITFGMTHFLGSCL 1142
            SH +A KRI RY+K T +  ++Y       +  ++DA   G  +D K T G  HFLG+ L
Sbjct: 1608 SHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSL 1667

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLW-IKQLEDFSVLTDGVPLLCDNTSALNMA 965
            +S  ++K++ VA STAEAEYVAAAS C+Q+LW I  L+D+ +   GVPLLCDNTSA+N+A
Sbjct: 1668 VSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIA 1727

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            KN VQH RTKHI++++HFLRDN+EKG I ++F ++E Q+ DIFTK + R  FE    ELG
Sbjct: 1728 KNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELG 1787

Query: 784  LI 779
            +I
Sbjct: 1788 VI 1789



 Score =  199 bits (507), Expect(3) = e-136
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = -1

Query: 2334 TRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLDIIV 2155
            TR+++  + + + F++  +PK +  AL D + + +M EEL  FE N+   LV  PL   V
Sbjct: 1268 TRNRSYELVN-SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNV 1326

Query: 2154 IVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFASHV 1975
            I T+WVF NKL E    +RNKARLV QG+ + EG+D++ETFAPVAR+EAIRIL+AFA+  
Sbjct: 1327 IGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASK 1386

Query: 1974 EFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWYERL 1795
             FKLFQM+VKSAFLNG ++E V++KQPP FE+ K   HVFK +KA Y LKQ P AWYERL
Sbjct: 1387 GFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERL 1446

Query: 1794 SKFFLENGF 1768
              F L+NGF
Sbjct: 1447 KTFLLQNGF 1455



 Score = 88.2 bits (217), Expect(3) = e-136
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            ++F L+   +   +  TLF    G + L+VQ+YV+DIIFG ++  L  +F+ +M  EF+M
Sbjct: 1447 KTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEM 1506

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEM 1500
            S+MGEL FFL L +K T +   + Q KY KELLK+F+M
Sbjct: 1507 SMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDM 1544


>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
          Length = 2256

 Score =  248 bits (632), Expect(3) = e-136
 Identities = 127/242 (52%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT + L  DE    V++  YR +IGSLLYLT SRPDI FS+ LCARFQ+SP+ 
Sbjct: 1527 KPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRT 1586

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADA---GYLVDMKITFGMTHFLGSCL 1142
            SH +A KR+ RY+K T +  ++Y       +  ++DA   G  +D K T G  HFLG+ L
Sbjct: 1587 SHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSL 1646

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLW-IKQLEDFSVLTDGVPLLCDNTSALNMA 965
            +S  ++K++ VA STAEAEYVAAAS C+Q+LW I  L+D+ +   GVPLLCDNTSA+N+A
Sbjct: 1647 VSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIA 1706

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            KN VQH RTKHI++++HFLRDN+EKG I ++F ++E Q+ DIFTK + R  FE    ELG
Sbjct: 1707 KNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELG 1766

Query: 784  LI 779
            +I
Sbjct: 1767 VI 1768



 Score =  199 bits (507), Expect(3) = e-136
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = -1

Query: 2334 TRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLDIIV 2155
            TR+++  + + + F++  +PK +  AL D + + +M EEL  FE N+   LV  PL   V
Sbjct: 1247 TRNRSYELVN-SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNV 1305

Query: 2154 IVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFASHV 1975
            I T+WVF NKL E    +RNKARLV QG+ + EG+D++ETFAPVAR+EAIRIL+AFA+  
Sbjct: 1306 IGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASK 1365

Query: 1974 EFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWYERL 1795
             FKLFQM+VKSAFLNG ++E V++KQPP FE+ K   HVFK +KA Y LKQ P AWYERL
Sbjct: 1366 GFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERL 1425

Query: 1794 SKFFLENGF 1768
              F L+NGF
Sbjct: 1426 KTFLLQNGF 1434



 Score = 88.2 bits (217), Expect(3) = e-136
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            ++F L+   +   +  TLF    G + L+VQ+YV+DIIFG ++  L  +F+ +M  EF+M
Sbjct: 1426 KTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEM 1485

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEM 1500
            S+MGEL FFL L +K T +   + Q KY KELLK+F+M
Sbjct: 1486 SMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDM 1523


>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group]
          Length = 2145

 Score =  248 bits (632), Expect(3) = e-136
 Identities = 127/242 (52%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT + L  DE    V++  YR +IGSLLYLT SRPDI FS+ LCARFQ+SP+ 
Sbjct: 1548 KPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRT 1607

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADA---GYLVDMKITFGMTHFLGSCL 1142
            SH +A KR+ RY+K T +  ++Y       +  ++DA   G  +D K T G  HFLG+ L
Sbjct: 1608 SHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSL 1667

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLW-IKQLEDFSVLTDGVPLLCDNTSALNMA 965
            +S  ++K++ VA STAEAEYVAAAS C+Q+LW I  L+D+ +   GVPLLCDNTSA+N+A
Sbjct: 1668 VSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIA 1727

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            KN VQH RTKHI++++HFLRDN+EKG I ++F ++E Q+ DIFTK + R  FE    ELG
Sbjct: 1728 KNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELG 1787

Query: 784  LI 779
            +I
Sbjct: 1788 VI 1789



 Score =  199 bits (507), Expect(3) = e-136
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = -1

Query: 2334 TRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLDIIV 2155
            TR+++  + + + F++  +PK +  AL D + + +M EEL  FE N+   LV  PL   V
Sbjct: 1268 TRNRSYELVN-SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNV 1326

Query: 2154 IVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFASHV 1975
            I T+WVF NKL E    +RNKARLV QG+ + EG+D++ETFAPVAR+EAIRIL+AFA+  
Sbjct: 1327 IGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASK 1386

Query: 1974 EFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWYERL 1795
             FKLFQM+VKSAFLNG ++E V++KQPP FE+ K   HVFK +KA Y LKQ P AWYERL
Sbjct: 1387 GFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERL 1446

Query: 1794 SKFFLENGF 1768
              F L+NGF
Sbjct: 1447 KTFLLQNGF 1455



 Score = 88.2 bits (217), Expect(3) = e-136
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            ++F L+   +   +  TLF    G + L+VQ+YV+DIIFG ++  L  +F+ +M  EF+M
Sbjct: 1447 KTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEM 1506

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEM 1500
            S+MGEL FFL L +K T +   + Q KY KELLK+F+M
Sbjct: 1507 SMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDM 1544


>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2124

 Score =  248 bits (632), Expect(3) = e-136
 Identities = 127/242 (52%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT + L  DE    V++  YR +IGSLLYLT SRPDI FS+ LCARFQ+SP+ 
Sbjct: 1527 KPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRT 1586

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADA---GYLVDMKITFGMTHFLGSCL 1142
            SH +A KR+ RY+K T +  ++Y       +  ++DA   G  +D K T G  HFLG+ L
Sbjct: 1587 SHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSL 1646

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLW-IKQLEDFSVLTDGVPLLCDNTSALNMA 965
            +S  ++K++ VA STAEAEYVAAAS C+Q+LW I  L+D+ +   GVPLLCDNTSA+N+A
Sbjct: 1647 VSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIA 1706

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            KN VQH RTKHI++++HFLRDN+EKG I ++F ++E Q+ DIFTK + R  FE    ELG
Sbjct: 1707 KNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELG 1766

Query: 784  LI 779
            +I
Sbjct: 1767 VI 1768



 Score =  199 bits (507), Expect(3) = e-136
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = -1

Query: 2334 TRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLDIIV 2155
            TR+++  + + + F++  +PK +  AL D + + +M EEL  FE N+   LV  PL   V
Sbjct: 1247 TRNRSYELVN-SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNV 1305

Query: 2154 IVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFASHV 1975
            I T+WVF NKL E    +RNKARLV QG+ + EG+D++ETFAPVAR+EAIRIL+AFA+  
Sbjct: 1306 IGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASK 1365

Query: 1974 EFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWYERL 1795
             FKLFQM+VKSAFLNG ++E V++KQPP FE+ K   HVFK +KA Y LKQ P AWYERL
Sbjct: 1366 GFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERL 1425

Query: 1794 SKFFLENGF 1768
              F L+NGF
Sbjct: 1426 KTFLLQNGF 1434



 Score = 88.2 bits (217), Expect(3) = e-136
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            ++F L+   +   +  TLF    G + L+VQ+YV+DIIFG ++  L  +F+ +M  EF+M
Sbjct: 1426 KTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEM 1485

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEM 1500
            S+MGEL FFL L +K T +   + Q KY KELLK+F+M
Sbjct: 1486 SMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDM 1523


>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1948

 Score =  248 bits (632), Expect(3) = e-136
 Identities = 127/242 (52%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT + L  DE    V++  YR +IGSLLYLT SRPDI FS+ LCARFQ+SP+ 
Sbjct: 1527 KPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRT 1586

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADA---GYLVDMKITFGMTHFLGSCL 1142
            SH +A KR+ RY+K T +  ++Y       +  ++DA   G  +D K T G  HFLG+ L
Sbjct: 1587 SHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSL 1646

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLW-IKQLEDFSVLTDGVPLLCDNTSALNMA 965
            +S  ++K++ VA STAEAEYVAAAS C+Q+LW I  L+D+ +   GVPLLCDNTSA+N+A
Sbjct: 1647 VSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIA 1706

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            KN VQH RTKHI++++HFLRDN+EKG I ++F ++E Q+ DIFTK + R  FE    ELG
Sbjct: 1707 KNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELG 1766

Query: 784  LI 779
            +I
Sbjct: 1767 VI 1768



 Score =  199 bits (507), Expect(3) = e-136
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = -1

Query: 2334 TRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLDIIV 2155
            TR+++  + + + F++  +PK +  AL D + + +M EEL  FE N+   LV  PL   V
Sbjct: 1247 TRNRSYELVN-SAFVASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNV 1305

Query: 2154 IVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFASHV 1975
            I T+WVF NKL E    +RNKARLV QG+ + EG+D++ETFAPVAR+EAIRIL+AFA+  
Sbjct: 1306 IGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASK 1365

Query: 1974 EFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWYERL 1795
             FKLFQM+VKSAFLNG ++E V++KQPP FE+ K   HVFK +KA Y LKQ P AWYERL
Sbjct: 1366 GFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERL 1425

Query: 1794 SKFFLENGF 1768
              F L+NGF
Sbjct: 1426 KTFLLQNGF 1434



 Score = 88.2 bits (217), Expect(3) = e-136
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            ++F L+   +   +  TLF    G + L+VQ+YV+DIIFG ++  L  +F+ +M  EF+M
Sbjct: 1426 KTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEM 1485

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEM 1500
            S+MGEL FFL L +K T +   + Q KY KELLK+F+M
Sbjct: 1486 SMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDM 1523


>emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]
          Length = 845

 Score =  248 bits (634), Expect(3) = e-135
 Identities = 130/242 (53%), Positives = 167/242 (69%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+AT   LD+D    PV+  +YR +IGSLLYLT SRPDI+FS+ +CARFQ++PKE
Sbjct: 598  KPIKTPMATNGHLDLDGGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKE 657

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYADAGYL---VDMKITFGMTHFLGSCL 1142
             HL A KRILRYLK +  + L+Y     F LVGY+D+ Y    VD K T G    LG  L
Sbjct: 658  CHLVAVKRILRYLKHSSTIGLWYPKSAKFKLVGYSDSDYASCKVDRKSTSGSCQMLGRSL 717

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+N+VALSTAEAEYV+A SCCAQLLW+KQ L D+ +     PLLCDN SA+ +A
Sbjct: 718  VSWSSKKQNFVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDSAIKIA 777

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
             N VQH RTKHID++HHFLRD++ K  I +   +TEDQ+ +IFTK +    F +   EL 
Sbjct: 778  NNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLAEIFTKPLDETRFCKLRNELN 837

Query: 784  LI 779
            +I
Sbjct: 838  VI 839



 Score =  192 bits (489), Expect(3) = e-135
 Identities = 98/192 (51%), Positives = 130/192 (67%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+QTRS+  ++    +F+S ++PK++ +AL D D + +M EEL+ F  N+    + RP D
Sbjct: 314  GVQTRSRVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTFIERPRD 373

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+WVF NK  E    +RNKARLV Q + + EG+D+ ETFAPV R+E IRIL+AFA
Sbjct: 374  HNVIGTKWVFRNKQDENGLVVRNKARLVAQAFTRVEGLDFGETFAPVTRLEVIRILLAFA 433

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            S  + KLFQM+VKSAFLNG + E VF++QPP FE  K+  H++KF KA Y LKQ P  WY
Sbjct: 434  SCFDIKLFQMDVKSAFLNGEIAELVFVEQPPGFEDPKNPNHIYKFSKALYGLKQAPRVWY 493

Query: 1803 ERLSKFFLENGF 1768
            ERL  F L   F
Sbjct: 494  ERLRDFLLSKDF 505



 Score = 92.4 bits (228), Expect(3) = e-135
 Identities = 44/100 (44%), Positives = 65/100 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F L    +  K+  TLF K  G +  + Q+YV+DIIFG+TN+  C+EF  ++  EF++
Sbjct: 497  RDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMISREFEI 556

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S++GEL+FFL L +K       +SQ KYIK LLKRF +E+
Sbjct: 557  SMIGELSFFLTLQIKQLKDGMFVSQTKYIKYLLKRFGLED 596


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  244 bits (624), Expect(3) = e-135
 Identities = 127/242 (52%), Positives = 164/242 (67%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+ T   LD+D     V++ +YR +IGSLLYL  SRPDI+ S+ +CARFQS PKE
Sbjct: 1644 KPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKE 1703

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
            SHL A KRILRYL  TP   L+Y     FDL+GY+D   AG  ++ K T G   FLG  L
Sbjct: 1704 SHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSL 1763

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+N VALSTAEAEY+AA  CCAQLLW++Q L D+      VPLLCDN SA+ MA
Sbjct: 1764 VSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMA 1823

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
             N V+H RTKHI +++HFLRD+ +KG I + +  T+DQ+ DIFTK +  + F R   EL 
Sbjct: 1824 DNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELN 1883

Query: 784  LI 779
            ++
Sbjct: 1884 IL 1885



 Score =  199 bits (507), Expect(3) = e-135
 Identities = 99/192 (51%), Positives = 139/192 (72%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+  +     +F+S I+P  +++AL+D+D +V+M EEL+ F  N+  HLVPRP +
Sbjct: 1361 GVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-N 1419

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              V+ T+WVF NK  E     RNKARLV +GY + EG+D+DET+APVAR+E+IRIL+A+A
Sbjct: 1420 QNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFDETYAPVARLESIRILLAYA 1479

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            ++  FKL+QM+VKSAFLNG +KE V+++QPP FE  ++  HV++  KA Y LKQ P AWY
Sbjct: 1480 TYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWY 1539

Query: 1803 ERLSKFFLENGF 1768
            E L  F + NGF
Sbjct: 1540 ECLRDFLIANGF 1551



 Score = 88.6 bits (218), Expect(3) = e-135
 Identities = 42/100 (42%), Positives = 65/100 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F +    +  K   TLF K    +L + Q+YV+DIIFG+TN+  CEEF+++M  +F+M
Sbjct: 1543 RDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEM 1602

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL +FL   VK   + T ISQ KY +++L +F M++
Sbjct: 1603 SMMGELKYFLGFQVKQLREGTFISQTKYTQDILAKFGMKD 1642


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  244 bits (624), Expect(3) = e-134
 Identities = 127/242 (52%), Positives = 164/242 (67%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+ T   LD+D     V++ +YR +IGSLLYL  SRPDI+ S+ +CARFQS PKE
Sbjct: 815  KPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKE 874

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
            SHL A KRILRYL  TP   L+Y     FDL+GY+D   AG  ++ K T G   FLG  L
Sbjct: 875  SHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSL 934

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+N VALSTAEAEY+AA  CCAQLLW++Q L D+      VPLLCDN SA+ MA
Sbjct: 935  VSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMA 994

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
             N V+H RTKHI +++HFLRD+ +KG I + +  T+DQ+ DIFTK +  + F R   EL 
Sbjct: 995  DNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELN 1054

Query: 784  LI 779
            ++
Sbjct: 1055 IL 1056



 Score =  197 bits (500), Expect(3) = e-134
 Identities = 98/192 (51%), Positives = 138/192 (71%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+  +     +F+S I+P  +++AL+D+D +V+M EEL+ F  N+  HLVPRP +
Sbjct: 532  GVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-N 590

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              V+ T+WVF NK  E     RNKARLV +GY + EG+D+ ET+APVAR+E+IRIL+A+A
Sbjct: 591  QNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYA 650

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            ++  FKL+QM+VKSAFLNG +KE V+++QPP FE  ++  HV++  KA Y LKQ P AWY
Sbjct: 651  TYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWY 710

Query: 1803 ERLSKFFLENGF 1768
            E L  F + NGF
Sbjct: 711  ECLRDFLIANGF 722



 Score = 88.6 bits (218), Expect(3) = e-134
 Identities = 42/100 (42%), Positives = 65/100 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F +    +  K   TLF K    +L + Q+YV+DIIFG+TN+  CEEF+++M  +F+M
Sbjct: 714  RDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEM 773

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL +FL   VK   + T ISQ KY +++L +F M++
Sbjct: 774  SMMGELKYFLGFQVKQLQEGTFISQTKYTQDILAKFGMKD 813


>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  242 bits (618), Expect(3) = e-134
 Identities = 126/242 (52%), Positives = 164/242 (67%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+ T   LD+D     V++ +YR +IGSLLYL  SRPDI+ S+ +CARFQS PKE
Sbjct: 1512 KPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKE 1571

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
            SHL A KRILRYL  TP   L+Y     FDL+GY+D   AG  ++ K T G   FLG  L
Sbjct: 1572 SHLTAVKRILRYLAYTPKFGLWYPRGSTFDLLGYSDADWAGCKINRKSTSGTCQFLGRSL 1631

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+N VALSTAEAEY+AA  CCAQLLW++Q L D+      VPLLCDN SA+ MA
Sbjct: 1632 VSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMA 1691

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
             N V+H RTKHI +++HFLRD+ +KG I + +  T+DQ+ DIFTK +  + F +   EL 
Sbjct: 1692 DNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQTFTKLRHELN 1751

Query: 784  LI 779
            ++
Sbjct: 1752 IL 1753



 Score =  198 bits (503), Expect(3) = e-134
 Identities = 99/192 (51%), Positives = 138/192 (71%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+  +     +F+S I+P  +++AL+D+D +V+M EEL+ F  N+  HLVPRP +
Sbjct: 1229 GVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-N 1287

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              V+ T+WVF NK  E     RNKARLV +GY + EG+D+ ET+APVAR+E+IRIL+A+A
Sbjct: 1288 QNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYA 1347

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            ++  FKL+QM+VKSAFLNG +KE V+++QPP FE  ++  HV+K  KA Y LKQ P AWY
Sbjct: 1348 TYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQAPRAWY 1407

Query: 1803 ERLSKFFLENGF 1768
            E L  F + NGF
Sbjct: 1408 ECLRDFLIANGF 1419



 Score = 89.0 bits (219), Expect(3) = e-134
 Identities = 42/100 (42%), Positives = 65/100 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F +    +  K   TLF K    +L + Q+YV+DIIFG+TN+  CEEF+++M  +F+M
Sbjct: 1411 RDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEM 1470

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL +FL   VK   + T ISQ KY +++L +F M++
Sbjct: 1471 SMMGELKYFLGFQVKQLQEGTFISQTKYTQDILSKFGMKD 1510


>emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]
          Length = 1510

 Score =  233 bits (593), Expect(3) = e-133
 Identities = 123/232 (53%), Positives = 156/232 (67%), Gaps = 4/232 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+ T   LD+D+    V++ +YR +IGSLLYL  SRPDI+ S+ +CARFQ+ PKE
Sbjct: 1258 KPIKTPMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQAEPKE 1317

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
             HL A KRI RYL  TP+L L+Y    +F+L+GY+D   AG  VD K   G   FLG  L
Sbjct: 1318 CHLIAVKRIQRYLVHTPNLGLWYPKGCDFELLGYSDSDYAGCKVDRKSITGTCQFLGPSL 1377

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S   KK+N + LST EAEYVAA SCCAQLLW+KQ L+DF       PLLCDN SA+ +A
Sbjct: 1378 VSWFPKKQNSIVLSTTEAEYVAAGSCCAQLLWMKQTLKDFGYNFTKTPLLCDNESAIKIA 1437

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHF 809
             N VQH +TKHID+ HHFLRD+  KG I +   +TE Q+ DIFTK +  + F
Sbjct: 1438 NNPVQHSKTKHIDIHHHFLRDHETKGDICLTHVRTETQLADIFTKPLDEKRF 1489



 Score =  195 bits (495), Expect(3) = e-133
 Identities = 99/192 (51%), Positives = 135/192 (70%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+  +     +F+S ++P  ++ AL D+D +++M EEL+ F  NQ  +LV RP  
Sbjct: 975  GVTTRSRVASFCQHYSFVSSLEPTRVEDALGDSDWVMAMQEELNNFARNQVWNLVERPKQ 1034

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E    +RNKARLV QG+ + EG+D+ ETFAPVAR+E+IRIL+A+A
Sbjct: 1035 N-VIGTKWIFRNKQDEHVVVVRNKARLVTQGFTQVEGLDFGETFAPVARLESIRILLAYA 1093

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            +H +F+LFQM+VKSAFLNG + E V+++QPP FE  K   HV+K  KA Y LKQ P AWY
Sbjct: 1094 AHHDFRLFQMDVKSAFLNGPISELVYVEQPPGFEDPKLPNHVYKLHKALYGLKQAPRAWY 1153

Query: 1803 ERLSKFFLENGF 1768
            E L  F L+NGF
Sbjct: 1154 ECLRDFLLKNGF 1165



 Score =  100 bits (248), Expect(3) = e-133
 Identities = 50/100 (50%), Positives = 66/100 (66%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F LK   +      TLF KK   +L I Q+YV+DIIFG+TN   CEEF+ +M   F+M
Sbjct: 1157 RDFLLKNGFEIGNADTTLFTKKFKSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEM 1216

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL FFL L VK   + T ISQ KY+K++LK+F ME+
Sbjct: 1217 SMMGELTFFLWLQVKQAQEGTFISQTKYVKDILKKFGMED 1256


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  243 bits (621), Expect(3) = e-133
 Identities = 127/242 (52%), Positives = 164/242 (67%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  TP+ T   LD+D     V++ +YR +IGSLLYL  SRPDI+ S+ +CARFQS PKE
Sbjct: 815  KPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKE 874

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
            SHL A KRILRYL  TP   L+Y     FDL+GY+D   AG  ++ K T G   FLG  L
Sbjct: 875  SHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSL 934

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+N VALSTAEAEY+AA  CCAQLLW++Q L D+      VPLLCDN SA+ MA
Sbjct: 935  VSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLLDYGYKLTKVPLLCDNESAIKMA 994

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
             N V+H RTKHI +++HFLRD+ +KG I + +  T+DQ+ DIFTK +  + F R   EL 
Sbjct: 995  DNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELN 1054

Query: 784  LI 779
            ++
Sbjct: 1055 IL 1056



 Score =  197 bits (500), Expect(3) = e-133
 Identities = 98/192 (51%), Positives = 138/192 (71%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+  +     +F+S I+P  +++AL+D+D +V+M EEL+ F  N+  HLVPRP +
Sbjct: 532  GVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRP-N 590

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              V+ T+WVF NK  E     RNKARLV +GY + EG+D+ ET+APVAR+E+IRIL+A+A
Sbjct: 591  QNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYA 650

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            ++  FKL+QM+VKSAFLNG +KE V+++QPP FE  ++  HV++  KA Y LKQ P AWY
Sbjct: 651  TYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWY 710

Query: 1803 ERLSKFFLENGF 1768
            E L  F + NGF
Sbjct: 711  ECLRDFLIANGF 722



 Score = 85.5 bits (210), Expect(3) = e-133
 Identities = 41/100 (41%), Positives = 63/100 (63%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F +    +  K   TLF K    +L + Q+YV+DIIFG+TN   CEEF+++M  +F+M
Sbjct: 714  RDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNKSTCEEFSRIMTQKFEM 773

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL +FL   VK   + T I Q KY +++L +F M++
Sbjct: 774  SMMGELKYFLGFQVKQLQEGTFICQTKYTQDILTKFGMKD 813


>gb|AEJ07944.1| Opie1 putative pol protein [Zea diploperennis]
          Length = 1065

 Score =  239 bits (610), Expect(3) = e-131
 Identities = 126/242 (52%), Positives = 162/242 (66%), Gaps = 4/242 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P+ TP+ T    D+++    V++  YR +IGSLLYL  SRPDI+ S+ +CARFQS PKE
Sbjct: 818  KPAKTPMGTDGHTDLNKGGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKE 877

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
             HL A KRILRYL  TP   ++Y     FDL+GY+D   AG  VD K T G   FLG  L
Sbjct: 878  CHLVAVKRILRYLVATPCFGIWYPKGSTFDLIGYSDSDYAGCKVDRKSTSGTCQFLGRSL 937

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+  VALSTAEAEYVAA  CC QLLW++Q L DF      VPLLCDN SA+ +A
Sbjct: 938  VSWSSKKQTSVALSTAEAEYVAAGQCCVQLLWMRQTLRDFGYNLSKVPLLCDNESAIRIA 997

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            +N V+H RTKHID++HHFLRD+ +KG I +    TE+Q+ DIFTK +  + F R   EL 
Sbjct: 998  ENPVEHSRTKHIDIRHHFLRDHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELN 1057

Query: 784  LI 779
            ++
Sbjct: 1058 VL 1059



 Score =  193 bits (491), Expect(3) = e-131
 Identities = 98/192 (51%), Positives = 134/192 (69%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+  N     +F+S I+P  +++AL D D +++M EEL+ F+ N+   LVPRP  
Sbjct: 535  GVTTRSRLANFCEHYSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ 594

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
             +V  T+WVF NK  E     RNKARLV +GY +  G+D++ETFAPVAR+E+IRIL+A+A
Sbjct: 595  NVV-GTKWVFRNKQDEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYA 653

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            +H  F+LFQM+VKSAFLNG +KE V+++QPP FE  ++ +HV K  KA Y LKQ P AWY
Sbjct: 654  AHHSFRLFQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWY 713

Query: 1803 ERLSKFFLENGF 1768
            E L  F + N F
Sbjct: 714  ECLRDFLIANAF 725



 Score = 87.8 bits (216), Expect(3) = e-131
 Identities = 44/100 (44%), Positives = 65/100 (65%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F +  A +  K   TLF K    +L   Q+YV+DIIFG+TN   CEEF+++M  +F+M
Sbjct: 717  RDFLIANAFKVGKADPTLFTKTCDGDLFACQIYVDDIIFGSTNQKSCEEFSRVMTQKFEM 776

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL++FL   V+     T ISQ KY ++L+KRF M++
Sbjct: 777  SMMGELSYFLGFQVRQLKDGTFISQTKYTQDLIKRFGMKD 816


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  232 bits (591), Expect(3) = e-130
 Identities = 119/237 (50%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
 Frame = -3

Query: 1480 TPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKESHLK 1301
            TP  T  +L  DE  + V++++YR +IGSLLYLT SRPDI +++G+CAR+Q++PK SHL 
Sbjct: 1334 TPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLT 1393

Query: 1300 ATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCLIS*G 1130
              KRIL+Y+ GT D  + Y    N  LVGY D   AG   D K T G   +LG+ LIS  
Sbjct: 1394 QVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1453

Query: 1129 TKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMAKNSV 953
            +KK+N V+LSTAEAEY+AA S C+QL+W+KQ L++++V  D + L CDN SA+N++KN V
Sbjct: 1454 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1513

Query: 952  QHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELGL 782
            QH RTKHID++HH++RD ++  +I +K   TE+Q+ DIFTKA+    FE+   +LG+
Sbjct: 1514 QHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGI 1570



 Score =  199 bits (505), Expect(3) = e-130
 Identities = 100/194 (51%), Positives = 136/194 (70%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+   + S + F+S+I+PK +K+AL D   I +M EEL QF+ N+   LVPRP  
Sbjct: 1046 GVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEG 1105

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E     RNKARLV QGY + EG+D+DETFAPVAR+E+IR+L+  A
Sbjct: 1106 TNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1165

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
              ++FKL+QM+VKSAFLNGYL E V+++QP  F    H +HV++  KA Y LKQ P AWY
Sbjct: 1166 CILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWY 1225

Query: 1803 ERLSKFFLENGFTR 1762
            ERL++F  + G+ +
Sbjct: 1226 ERLTEFLTQQGYRK 1239



 Score = 85.1 bits (209), Expect(3) = e-130
 Identities = 40/98 (40%), Positives = 63/98 (64%)
 Frame = -2

Query: 1787 FFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDMSI 1608
            F  +   ++  I  TLF+K+  +NL+I Q+YV+DI+FG  ++ +   F + M SEF+MS+
Sbjct: 1231 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1290

Query: 1607 MGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            +GEL +FL L VK       +SQ +Y K ++K+F MEN
Sbjct: 1291 VGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMEN 1328


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  232 bits (591), Expect(3) = e-130
 Identities = 119/237 (50%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
 Frame = -3

Query: 1480 TPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKESHLK 1301
            TP  T  +L  DE  + V++++YR +IGSLLYLT SRPDI +++G+CAR+Q++PK SHL 
Sbjct: 1332 TPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLT 1391

Query: 1300 ATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCLIS*G 1130
              KRIL+Y+ GT D  + Y    N  LVGY D   AG   D K T G   +LG+ LIS  
Sbjct: 1392 QVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1451

Query: 1129 TKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMAKNSV 953
            +KK+N V+LSTAEAEY+AA S C+QL+W+KQ L++++V  D + L CDN SA+N++KN V
Sbjct: 1452 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1511

Query: 952  QHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELGL 782
            QH RTKHID++HH++RD ++  +I +K   TE+Q+ DIFTKA+    FE+   +LG+
Sbjct: 1512 QHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGI 1568



 Score =  199 bits (505), Expect(3) = e-130
 Identities = 100/194 (51%), Positives = 136/194 (70%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+   + S + F+S+I+PK +K+AL D   I +M EEL QF+ N+   LVPRP  
Sbjct: 1044 GVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEG 1103

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E     RNKARLV QGY + EG+D+DETFAPVAR+E+IR+L+  A
Sbjct: 1104 TNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1163

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
              ++FKL+QM+VKSAFLNGYL E V+++QP  F    H +HV++  KA Y LKQ P AWY
Sbjct: 1164 CILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWY 1223

Query: 1803 ERLSKFFLENGFTR 1762
            ERL++F  + G+ +
Sbjct: 1224 ERLTEFLTQQGYRK 1237



 Score = 85.1 bits (209), Expect(3) = e-130
 Identities = 40/98 (40%), Positives = 63/98 (64%)
 Frame = -2

Query: 1787 FFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDMSI 1608
            F  +   ++  I  TLF+K+  +NL+I Q+YV+DI+FG  ++ +   F + M SEF+MS+
Sbjct: 1229 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1288

Query: 1607 MGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            +GEL +FL L VK       +SQ +Y K ++K+F MEN
Sbjct: 1289 VGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMEN 1326


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  231 bits (588), Expect(3) = e-129
 Identities = 119/236 (50%), Positives = 165/236 (69%), Gaps = 4/236 (1%)
 Frame = -3

Query: 1480 TPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKESHLK 1301
            TP  T  +L  DE  + V++ +YR +IGSLLYLT SRPDI F++G+CAR+Q++PK SHL 
Sbjct: 1334 TPAPTHLKLSKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLN 1393

Query: 1300 ATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCLIS*G 1130
              KRIL+Y+ GT D  + Y    +  LVGY D   AG   D K T G   +LG+ LIS  
Sbjct: 1394 QVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLISWF 1453

Query: 1129 TKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMAKNSV 953
            +KK+N V+LSTAEAEY+AA S C+QL+W+KQ L++++V  D + L CDN SA+N++KN V
Sbjct: 1454 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1513

Query: 952  QHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELG 785
            QH RTKHID++HH++RD ++  +I ++   TE+QV DIFTKA+    FE+   +LG
Sbjct: 1514 QHNRTKHIDIRHHYIRDLVDDKIITLEHVDTEEQVADIFTKALDANQFEKLRGKLG 1569



 Score =  196 bits (499), Expect(3) = e-129
 Identities = 99/194 (51%), Positives = 135/194 (69%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+   + S + F+S+I+PK +K+AL D   I +M EEL QF+ N+   LVPRP  
Sbjct: 1046 GVTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEG 1105

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E     RNKARLV QGY + EG+D+DETFAPVAR+E+IR+L+  A
Sbjct: 1106 TNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1165

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
              ++FKL+QM+VKSAFLNGYL E  +++QP  F    H +HV++  KA Y LKQ P AWY
Sbjct: 1166 CILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAWY 1225

Query: 1803 ERLSKFFLENGFTR 1762
            ERL++F  + G+ +
Sbjct: 1226 ERLTEFLTQQGYRK 1239



 Score = 85.9 bits (211), Expect(3) = e-129
 Identities = 41/98 (41%), Positives = 63/98 (64%)
 Frame = -2

Query: 1787 FFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDMSI 1608
            F  +   ++  I  TLF+K+  +NL+I Q+YV+DI+FG  ++ +   F   M SEF+MS+
Sbjct: 1231 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQSEFEMSL 1290

Query: 1607 MGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            +GEL++FL L VK       +SQ KY K ++K+F MEN
Sbjct: 1291 VGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMEN 1328


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  229 bits (583), Expect(3) = e-129
 Identities = 118/237 (49%), Positives = 165/237 (69%), Gaps = 4/237 (1%)
 Frame = -3

Query: 1480 TPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKESHLK 1301
            TP  T  +L  DE  + V++  YR +IGSLLYLT SRPDI +++G+CAR+Q++PK SHL 
Sbjct: 1334 TPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLN 1393

Query: 1300 ATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCLIS*G 1130
              KRIL+Y+ GT D  + Y    +  LVGY D   AG   D K T G   +LG+ LIS  
Sbjct: 1394 QVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1453

Query: 1129 TKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMAKNSV 953
            +KK+N V+LSTAEAEY+AA S C+QL+W+KQ L++++V  D + L CDN SA+N++KN V
Sbjct: 1454 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1513

Query: 952  QHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELGL 782
            QH RTKHID++HH++RD ++  +I +K   TE+Q+ DIFTKA+    FE+   +LG+
Sbjct: 1514 QHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGI 1570



 Score =  199 bits (505), Expect(3) = e-129
 Identities = 100/194 (51%), Positives = 136/194 (70%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+   + S + F+S+I+PK +K+AL D   I +M EEL QF+ N+   LVPRP  
Sbjct: 1046 GVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEG 1105

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E     RNKARLV QGY + EG+D+DETFAPVAR+E+IR+L+  A
Sbjct: 1106 TNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1165

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
              ++FKL+QM+VKSAFLNGYL E V+++QP  F    H +HV++  KA Y LKQ P AWY
Sbjct: 1166 CILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWY 1225

Query: 1803 ERLSKFFLENGFTR 1762
            ERL++F  + G+ +
Sbjct: 1226 ERLTEFLTQQGYRK 1239



 Score = 85.1 bits (209), Expect(3) = e-129
 Identities = 40/98 (40%), Positives = 63/98 (64%)
 Frame = -2

Query: 1787 FFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDMSI 1608
            F  +   ++  I  TLF+K+  +NL+I Q+YV+DI+FG  ++ +   F + M SEF+MS+
Sbjct: 1231 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1290

Query: 1607 MGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            +GEL +FL L VK       +SQ +Y K ++K+F MEN
Sbjct: 1291 VGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMEN 1328


>gb|ABA91220.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1860

 Score =  218 bits (554), Expect(3) = e-128
 Identities = 115/215 (53%), Positives = 149/215 (69%), Gaps = 4/215 (1%)
 Frame = -3

Query: 1492 RPSDTPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKE 1313
            +P  T + T   LD+D+    V++ +YR +IGSLLYL  SRPDI+ S+ +CARFQ+ PKE
Sbjct: 1154 KPIKTSMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQAEPKE 1213

Query: 1312 SHLKATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCL 1142
             HL A KRILRYL  TP+L L+Y    +F+L+GY D   AG  VD K T G   FLG  L
Sbjct: 1214 CHLIAVKRILRYLVHTPNLGLWYPKGCDFELLGYFDSDYAGCKVDRKSTTGTCQFLGRSL 1273

Query: 1141 IS*GTKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMA 965
            +S  +KK+N +ALSTAEA+YVAA SCCAQLLW++Q L+DF      +PLLCDN SA+ +A
Sbjct: 1274 VSWSSKKQNSIALSTAEAKYVAAGSCCAQLLWMRQTLKDFGYNFTKIPLLCDNESAIKIA 1333

Query: 964  KNSVQHKRTKHIDVKHHFLRDNIEKGLIFMKFCKT 860
             N VQH RTKHID+ HHFL+D+  KG I +   ++
Sbjct: 1334 NNPVQHSRTKHIDICHHFLKDHETKGDICLTHARS 1368



 Score =  192 bits (487), Expect(3) = e-128
 Identities = 97/192 (50%), Positives = 131/192 (68%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ T S+  +     +F+S ++P  ++ AL D D +++M EEL+ F  NQ   LV RP  
Sbjct: 871  GVTTHSRVASFCQHFSFVSSLEPTRVEDALGDPDWVMAMQEELNNFTRNQVWTLVERPKQ 930

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+FCNK  E    +RNKARLV QG+ + EG+D+ ETFAPVAR+E+IRIL+A+A
Sbjct: 931  N-VIGTKWIFCNKQDEHRVVVRNKARLVAQGFTQVEGLDFGETFAPVARIESIRILLAYA 989

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
            +H +F+LF M+VKSAFLNG + E V+++QPP FE  K   HV+K  KA Y LKQ P  WY
Sbjct: 990  AHHDFRLFHMDVKSAFLNGPISELVYVEQPPGFEDPKLPNHVYKLHKALYGLKQAPRDWY 1049

Query: 1803 ERLSKFFLENGF 1768
            E L  F L+NGF
Sbjct: 1050 ECLRDFLLKNGF 1061



 Score =  102 bits (253), Expect(3) = e-128
 Identities = 51/100 (51%), Positives = 67/100 (67%)
 Frame = -2

Query: 1793 QSFFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDM 1614
            + F LK   +  K   TLF KK   +L I Q+YV+DIIFG+TN   CEEF+ +M   F+M
Sbjct: 1053 RDFLLKNGFEIGKADTTLFTKKFMSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEM 1112

Query: 1613 SIMGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            S+MGEL FFL L VK   + T ISQ KY+K++LK+F ME+
Sbjct: 1113 SMMGELTFFLGLQVKQALEGTFISQTKYVKDILKKFGMED 1152


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  228 bits (581), Expect(3) = e-128
 Identities = 116/237 (48%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
 Frame = -3

Query: 1480 TPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKESHLK 1301
            TP  T  +L  DE  + V++++YR +IGSLLYLT SRPDI +++G+CAR+Q++PK SHL 
Sbjct: 1335 TPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLN 1394

Query: 1300 ATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCLIS*G 1130
              KRIL+Y+ GT D  + Y       LVGY D   AG   D K T G   +LG+ LIS  
Sbjct: 1395 QVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWF 1454

Query: 1129 TKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMAKNSV 953
            +KK+N V+LSTAEAEY+AA S C+QL+W+KQ L++++V  D + L CDN SA+N++KN V
Sbjct: 1455 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPV 1514

Query: 952  QHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELGL 782
            QH RTKHID++HH++R+ ++  +I ++   TE+Q+ DIFTKA+  + FE+   +LG+
Sbjct: 1515 QHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKLGI 1571



 Score =  197 bits (500), Expect(3) = e-128
 Identities = 99/194 (51%), Positives = 135/194 (69%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+   + S + F+S+I+PK +K+AL D   I +M EEL QF+ N+   LVPRP  
Sbjct: 1047 GVTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEG 1106

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E     RNKARLV QGY + EG+D+DETFAPVAR+E+IR+L+  A
Sbjct: 1107 TNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1166

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
              ++FKL+QM+VKSAFLNGYL E  +++QP  F    H +HV++  KA Y LKQ P AWY
Sbjct: 1167 CILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWY 1226

Query: 1803 ERLSKFFLENGFTR 1762
            ERL++F  + G+ +
Sbjct: 1227 ERLTEFLTQQGYRK 1240



 Score = 86.3 bits (212), Expect(3) = e-128
 Identities = 41/98 (41%), Positives = 63/98 (64%)
 Frame = -2

Query: 1787 FFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDMSI 1608
            F  +   ++  I  TLF+K+  +NL+I Q+YV+DI+FG  ++ +   F + M SEF+MS+
Sbjct: 1232 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1291

Query: 1607 MGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            +GEL +FL L VK       +SQ KY K ++K+F MEN
Sbjct: 1292 VGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMEN 1329


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  230 bits (586), Expect(3) = e-128
 Identities = 117/237 (49%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
 Frame = -3

Query: 1480 TPIATATRLDMDEPRSPVNETMYRGIIGSLLYLTVSRPDIVFSIGLCARFQSSPKESHLK 1301
            TP  T  +L  DE  + V++++YR +IGSLLYLT SRPDI +++G CAR+Q++PK SHL 
Sbjct: 1308 TPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGGCARYQANPKISHLN 1367

Query: 1300 ATKRILRYLKGTPDLVLFYHSRDNFDLVGYAD---AGYLVDMKITFGMTHFLGSCLIS*G 1130
              KRIL+Y+ GT D  + Y    +  LVGY D   AG + D K TFG   +LG+  IS  
Sbjct: 1368 QVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTFGGCFYLGTNFISWF 1427

Query: 1129 TKKRNYVALSTAEAEYVAAASCCAQLLWIKQ-LEDFSVLTDGVPLLCDNTSALNMAKNSV 953
            +KK+N V+LSTAEAEY+AA S C+QL+W+KQ L++++V  D + L CDN SA+N++KN V
Sbjct: 1428 SKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPV 1487

Query: 952  QHKRTKHIDVKHHFLRDNIEKGLIFMKFCKTEDQVVDIFTKAMSREHFERNCLELGL 782
            QH RTKHID++HH++RD ++  +I ++   TE+Q+ DIFTKA+    FE+   +LG+
Sbjct: 1488 QHSRTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKALDANQFEKLRGKLGI 1544



 Score =  194 bits (494), Expect(3) = e-128
 Identities = 98/194 (50%), Positives = 134/194 (69%)
 Frame = -1

Query: 2343 GIQTRSKARNMFSFTTFLSQIKPKYIKKALKDAD*IVSM*EELHQFEINQACHLVPRPLD 2164
            G+ TRS+   + S + F+S+I+PK +K+AL D   I +M EEL QF+ N+   LVPRP  
Sbjct: 1020 GVTTRSREIEIISNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEG 1079

Query: 2163 IIVIVTRWVFCNKLYEFEKTIRNKARLVVQGYIKEEGIDYDETFAPVARMEAIRILIAFA 1984
              VI T+W+F NK  E     RNKARLV QGY + EG+D+DETFAP AR+E+IR+L+  A
Sbjct: 1080 TNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVA 1139

Query: 1983 SHVEFKLFQMNVKSAFLNGYLKEAVFIKQPPNFESHKHHEHVFKFDKAPYDLKQGPWAWY 1804
              ++FKL+QM+VKSAFLNGYL E  +++QP  F    H +HV++  KA Y LKQ P AWY
Sbjct: 1140 CILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWY 1199

Query: 1803 ERLSKFFLENGFTR 1762
            ERL++F  + G+ +
Sbjct: 1200 ERLTEFLTQQGYRK 1213



 Score = 86.3 bits (212), Expect(3) = e-128
 Identities = 41/98 (41%), Positives = 63/98 (64%)
 Frame = -2

Query: 1787 FFLKMALQERKIKNTLFLKKRGKNLLIVQVYVEDIIFGATNDFLCEEFAKLMGSEFDMSI 1608
            F  +   ++  I  TLF+K+  +NL+I Q+YV+DI+FG  ++ +   F + M SEF+MS+
Sbjct: 1205 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1264

Query: 1607 MGELNFFLRLHVKPTTKDTMISQ*KYIKELLKRFEMEN 1494
            +GEL +FL L VK       +SQ KY K ++K+F MEN
Sbjct: 1265 VGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMEN 1302