BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00022216
         (2417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55238.1| integrase [Beta vulgaris]                              207   e-109
gb|ABH08430.1| putative integrase [Beta vulgaris]                     207   e-109
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   152   4e-91
emb|CAN60489.1| hypothetical protein VITISV_030840 [Vitis vinifera]   178   2e-90
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]     167   3e-90
gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]     164   1e-89
gb|ABF97883.1| retrotransposon protein, putative, unclassified [...   162   1e-89
emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]                 159   2e-89
gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subc...   161   5e-89
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...   152   6e-89
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...   161   3e-88
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]     161   3e-88
gb|AAS98452.2| putative polyprotein [Oryza sativa Japonica Group]     158   3e-88
emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]          165   4e-88
gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]     164   5e-88
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]         160   7e-88
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...   160   7e-88
gb|ABF93543.1| retrotransposon protein, putative, unclassified [...   160   7e-88
gb|ABF94836.1| retrotransposon protein, putative, unclassified [...   160   7e-88
gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]     156   2e-87

>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score =  207 bits (528), Expect(4) = e-109
 Identities = 109/186 (58%), Positives = 135/186 (72%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+SHL  VK ILR LK   D GL+Y R   F L GYA  +YA  LV+RKSTS MA FLG 
Sbjct: 1330 KESHLTAVKRILRYLKGTDDLGLYYPRSDTFELKGYADADYAGDLVNRKSTSGMAQFLGH 1389

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +TKKQN+VALS A+AEY+  A+CC+QMLWIKQQL D+ +N   + I+ DNTS+I+
Sbjct: 1390 SLVSWSTKKQNTVALSTAEAEYVAAAACCSQMLWIKQQLSDYGINFECVPIYCDNTSAIS 1449

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            I+K+P+HH+  K+I IRHH LR+NVEK LI +  C TD QIA+I  K L RD +EK  LE
Sbjct: 1450 ISKDPVHHSRVKHIHIRHHFLRENVEKGLIKLEFCQTDYQIADILTKPLQRDRYEKLRLE 1509

Query: 1122 LGMIKI 1105
            L +IKI
Sbjct: 1510 LCLIKI 1515



 Score =  157 bits (397), Expect(4) = e-109
 Identities = 75/132 (56%), Positives = 96/132 (72%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE    P+H+YK+DK LYGLKQ PR WYERLSKFLL N   RG +D  LFLK+K  ++L
Sbjct: 1139 GFENNNLPNHVYKLDKALYGLKQAPRSWYERLSKFLLENNFKRGKVDKTLFLKSKGTDIL 1198

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFGAT+E+L KE +             ELNFFLG+QIKQT  G I+HQQKY
Sbjct: 1199 LVQIYVDDIIFGATNETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQTEKGIIVHQQKY 1258

Query: 1891 VKELHKRFKMED 1856
            +KEL K++ +E+
Sbjct: 1259 IKELLKKYGLEN 1270



 Score = 64.7 bits (156), Expect(4) = e-109
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF*L 1668
            +E+ K   T + T+T+LD D  G+ ++   Y+GMIG LLYLTAS P+I FSVGLCARF  
Sbjct: 1268 LENSKINHTPMGTSTRLDEDSIGTSVDQTKYRGMIGLLLYLTASRPDIAFSVGLCARFQA 1327

Query: 1667 NKK 1659
            N K
Sbjct: 1328 NPK 1330



 Score = 38.1 bits (87), Expect(4) = e-109
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -3

Query: 2370 ARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            AR E IR+ IAF+ Y+ F LYQMDVK +F
Sbjct: 1095 ARLEAIRILIAFAAYMGFKLYQMDVKCAF 1123


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score =  207 bits (528), Expect(4) = e-109
 Identities = 109/186 (58%), Positives = 135/186 (72%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+SHL  VK ILR LK   D GL+Y R   F L GYA  +YA  LV+RKSTS MA FLG 
Sbjct: 1330 KESHLTAVKRILRYLKGTDDLGLYYPRSDTFELKGYADADYAGDLVNRKSTSGMAQFLGH 1389

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +TKKQN+VALS A+AEY+  A+CC+QMLWIKQQL D+ +N   + I+ DNTS+I+
Sbjct: 1390 SLVSWSTKKQNTVALSTAEAEYVAAAACCSQMLWIKQQLSDYGINFECVPIYCDNTSAIS 1449

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            I+K+P+HH+  K+I IRHH LR+NVEK LI +  C TD QIA+I  K L RD +EK  LE
Sbjct: 1450 ISKDPVHHSRVKHIHIRHHFLRENVEKGLIKLEFCQTDYQIADILTKPLQRDRYEKLRLE 1509

Query: 1122 LGMIKI 1105
            L +IKI
Sbjct: 1510 LCLIKI 1515



 Score =  157 bits (397), Expect(4) = e-109
 Identities = 75/132 (56%), Positives = 96/132 (72%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE    P+H+YK+DK LYGLKQ PR WYERLSKFLL N   RG +D  LFLK+K  ++L
Sbjct: 1139 GFENNNLPNHVYKLDKALYGLKQAPRSWYERLSKFLLENNFKRGKVDKTLFLKSKGTDIL 1198

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFGAT+E+L KE +             ELNFFLG+QIKQT  G I+HQQKY
Sbjct: 1199 LVQIYVDDIIFGATNETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQTEKGIIVHQQKY 1258

Query: 1891 VKELHKRFKMED 1856
            +KEL K++ +E+
Sbjct: 1259 IKELLKKYGLEN 1270



 Score = 64.7 bits (156), Expect(4) = e-109
 Identities = 34/63 (53%), Positives = 44/63 (69%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF*L 1668
            +E+ K   T + T+T+LD D  G+ ++   Y+GMIG LLYLTAS P+I FSVGLCARF  
Sbjct: 1268 LENSKINHTPMGTSTRLDEDSIGTSVDQTKYRGMIGLLLYLTASRPDIAFSVGLCARFQA 1327

Query: 1667 NKK 1659
            N K
Sbjct: 1328 NPK 1330



 Score = 38.1 bits (87), Expect(4) = e-109
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -3

Query: 2370 ARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            AR E IR+ IAF+ Y+ F LYQMDVK +F
Sbjct: 1095 ARLEAIRILIAFAAYMGFKLYQMDVKCAF 1123


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  152 bits (383), Expect(4) = 4e-91
 Identities = 76/175 (43%), Positives = 118/175 (67%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            ++SHL  VK I R LK  ++ GL Y +  ++ L+G+   +YA   ++RKSTS    FLG 
Sbjct: 1528 RESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGE 1587

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             L+S A+K+Q ++A+S A+AEYI+ ASCC Q+LW+K QL+D+ +N   I I+ DNT+ I 
Sbjct: 1588 NLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAVIC 1647

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFE 1138
            ++KNP+ H+  K+I+I+HH +RD V+K ++ I    T+ Q A+IF K L  + F+
Sbjct: 1648 LSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFD 1702



 Score =  144 bits (364), Expect(4) = 4e-91
 Identities = 67/132 (50%), Positives = 90/132 (68%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE +++PDH+YK+ K LYGLKQ PR WY+RLS FL+ N   RG +D  LF +   K++L
Sbjct: 1337 GFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDIL 1396

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG+T+ SL KE +             EL FFLG+QI Q+  G  +HQ KY
Sbjct: 1397 IVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKY 1456

Query: 1891 VKELHKRFKMED 1856
             KEL K+FK+ED
Sbjct: 1457 TKELLKKFKLED 1468



 Score = 65.9 bits (159), Expect(4) = 4e-91
 Identities = 32/59 (54%), Positives = 46/59 (77%)
 Frame = -1

Query: 1850 QMEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            ++ED K ++T +  T  L  ++ G++++ KLY+GMIGSLLYLTAS P+I+FSV LCARF
Sbjct: 1465 KLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARF 1523



 Score = 44.7 bits (104), Expect(4) = 4e-91
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            Y ETF PVAR E IRL ++++     ILYQMDVKS+F
Sbjct: 1285 YTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAF 1321


>emb|CAN60489.1| hypothetical protein VITISV_030840 [Vitis vinifera]
          Length = 738

 Score =  178 bits (451), Expect(4) = 2e-90
 Identities = 93/195 (47%), Positives = 128/195 (65%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+SHL  VK ILR LK   + GLWYL+  NF L+G++  ++A   V+RKSTS   HFLG 
Sbjct: 239  KESHLSAVKRILRYLKGTMNIGLWYLKGDNFELIGFSNADFAGCRVERKSTSGTCHFLGH 298

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS  +KKQNSVALS A+ EYI    CCAQ+LW+KQ L DF ++  ++ I  DNTS+IN
Sbjct: 299  SLVSWHSKKQNSVALSTAEVEYIAAGLCCAQILWMKQTLSDFNLSFEHVPIKCDNTSAIN 358

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            I+KNP+ H+ TK+I+IRHH LRD+  K  I++   +T  Q+A+IF K L  + F     +
Sbjct: 359  ISKNPVQHSRTKHIEIRHHFLRDHAPKGDITLEFVSTKDQLADIFTKPLSEEQFSDIRRQ 418

Query: 1122 LGMIKIT*VSPNDWV 1078
            LG  ++  +    W+
Sbjct: 419  LGFSELISIFFGFWM 433



 Score =  105 bits (261), Expect(4) = 2e-90
 Identities = 53/132 (40%), Positives = 75/132 (56%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GF+   +P++++K+ K LYGLKQ PR WYERLSKFLL  G     ID  LF+K K K++L
Sbjct: 78   GFQSFNFPNYVFKLKKALYGLKQAPRAWYERLSKFLLKKGFKMRKIDTTLFIKTKEKDML 137

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFGAT++SL ++ +                                   KY
Sbjct: 138  LVQIYVDDIIFGATNDSLCEDFSKCM------------------------------HTKY 167

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF ME+
Sbjct: 168  IKDLLKRFNMEE 179



 Score = 68.9 bits (167), Expect(4) = 2e-90
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            ME+ K + T +S++ KLD+DE G  I+  +Y+GMIGSLLYLTAS P+I++SV LCARF
Sbjct: 177  MEEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARF 234



 Score = 53.1 bits (126), Expect(4) = 2e-90
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            Y+ETF PVAR E IR+ +AF+ + +FILYQMDVKS+F
Sbjct: 26   YEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAF 62


>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1411

 Score =  167 bits (424), Expect(4) = 3e-90
 Identities = 93/184 (50%), Positives = 121/184 (65%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK  S+ GLWY + + F L+GY+Y +YA   VDRKSTS     LG 
Sbjct: 1222 KECHLVAVKRILRYLKHSSNIGLWYPKGAKFKLVGYSYSDYASCKVDRKSTSGSCQMLGR 1281

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSVALS A+A+Y++  SCCAQ+LW+KQ L D+ ++     +  DN S+I 
Sbjct: 1282 SLVSWSSKKQNSVALSTAEAKYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDSAIK 1341

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IA NP+ H+ TK+IDIRHH LRD+V K  I I    T+ Q+A+IF K L    F K   E
Sbjct: 1342 IANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETCFYKLRNE 1401

Query: 1122 LGMI 1111
            L +I
Sbjct: 1402 LNVI 1405



 Score =  125 bits (313), Expect(4) = 3e-90
 Identities = 62/132 (46%), Positives = 80/132 (60%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  + P+H+YK+ K LYGLKQ PR WYERL  FLL      G +D  LF K    +  
Sbjct: 1031 GFEDPKNPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFF 1090

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VD +IFG+T+E   KE  +            EL+FFLG+QIKQ   GT + Q KY
Sbjct: 1091 VCQIYVDGIIFGSTNEVFCKEFGDMMSREFDMSMIGELSFFLGLQIKQLKDGTFVSQTKY 1150

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 1151 IKDLLKRFGLED 1162



 Score = 68.9 bits (167), Expect(4) = 3e-90
 Identities = 35/58 (60%), Positives = 44/58 (75%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T   LDLDE G  ++ KLY+ MIGSLLYLTAS P+I+FSV +CARF
Sbjct: 1160 LEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARF 1217



 Score = 42.7 bits (99), Expect(4) = 3e-90
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PVAR E IR+ +AF++  +  L+QMDVKS F
Sbjct: 979  FGETFAPVARLEAIRILLAFASCFDIKLFQMDVKSVF 1015


>gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1584

 Score =  164 bits (414), Expect(4) = 1e-89
 Identities = 93/190 (48%), Positives = 121/190 (63%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK  S  GLWY + + F L+GY+  +YA   VDRKSTS     LG 
Sbjct: 1395 KECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYASCKVDRKSTSGSCQMLGR 1454

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSVALS A+AEY++  SCCAQ+LW+KQ L D+ ++     +  DN  +I 
Sbjct: 1455 SLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDRAIK 1514

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IA NP+ H+ TK+IDIRHH LRD+V K  I I    T+ Q+A+IF K L    F K   E
Sbjct: 1515 IANNPVQHSRTKHIDIRHHFLRDHVTKCDIVISHIRTEDQLADIFTKPLNETRFCKLRNE 1574

Query: 1122 LGMIKIT*VS 1093
            L +I  + V+
Sbjct: 1575 LNVIDFSNVA 1584



 Score =  127 bits (319), Expect(4) = 1e-89
 Identities = 63/132 (47%), Positives = 81/132 (61%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  + P+H+YK+ K LYGLKQ PR WYERL  FLL      G ++  LF K    +  
Sbjct: 1204 GFEDPKNPNHVYKLSKALYGLKQAPRAWYERLRYFLLSKDFKIGKVNTTLFTKIIGDDFF 1263

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VDD+IFG+T+E   KE  +            ELNFFLG+QIKQ   GT + Q KY
Sbjct: 1264 VCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKY 1323

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 1324 IKDLLKRFGLED 1335



 Score = 67.4 bits (163), Expect(4) = 1e-89
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T   LDLD+ G  ++ KLY+ MIGSLLYLTAS P+I+FSV +CARF
Sbjct: 1333 LEDAKPIKTPMATNGHLDLDKGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARF 1390



 Score = 43.9 bits (102), Expect(4) = 1e-89
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PVAR E IR+ +AF++  +  L+QMDVKS+F
Sbjct: 1152 FGETFAPVARLEAIRILLAFASCFDIKLFQMDVKSAF 1188


>gb|ABF97883.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1441

 Score =  162 bits (410), Expect(4) = 1e-89
 Identities = 93/190 (48%), Positives = 121/190 (63%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK I R LK  S  GLWY + + F L+GY   +YA   VDRKSTS     LG 
Sbjct: 1252 KECHLVAVKRIPRYLKHSSTIGLWYPKCAKFKLVGYFDSDYAGCKVDRKSTSDSCQMLGR 1311

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSVALS A+AEY++  SCCAQ+LW+KQ L D+ ++     +  DN S+I 
Sbjct: 1312 SLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDSAIK 1371

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IA NP+ H+ TK+IDIRHH LRD+V+K  I I    T+ Q+A+IF K L    F K   E
Sbjct: 1372 IANNPVQHSRTKHIDIRHHFLRDHVDKCDIVISHIRTENQLADIFTKPLDETRFCKLRNE 1431

Query: 1122 LGMIKIT*VS 1093
            L +I  + V+
Sbjct: 1432 LNVIDFSNVA 1441



 Score =  130 bits (326), Expect(4) = 1e-89
 Identities = 63/132 (47%), Positives = 81/132 (61%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  +YP+H+YK+ K  YGLKQ PR WYERL  FLL      G +D  LF K    +  
Sbjct: 1061 GFEDPKYPNHVYKLSKAFYGLKQAPRAWYERLKDFLLSKDFKIGKVDTTLFTKIIGDDFF 1120

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VDD+IFG+T+E   KE  +            EL+FFLG+QIKQ   GT + Q KY
Sbjct: 1121 VCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKDGTFVSQTKY 1180

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 1181 IKDLLKRFGLED 1192



 Score = 65.5 bits (158), Expect(4) = 1e-89
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K   T ++T   LDLDE G  ++ KLY  MIGSLLYLTAS P+I+FSV +CARF
Sbjct: 1190 LEDAKPTKTPMATNRHLDLDEGGKPVDLKLYCSMIGSLLYLTASRPDIMFSVYMCARF 1247



 Score = 44.7 bits (104), Expect(4) = 1e-89
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PV R E IR+F+AF++  +  L+QMDVKS+F
Sbjct: 1009 FGETFAPVTRLEAIRIFLAFASCFDIKLFQMDVKSAF 1045


>emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]
          Length = 2029

 Score =  159 bits (403), Expect(4) = 2e-89
 Identities = 84/182 (46%), Positives = 118/182 (64%)
 Frame = -3

Query: 1656 SHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGSCL 1477
            SH + VK I R L+   D G+WY   S  +L  ++  ++A   +DRKSTS    FLG+ L
Sbjct: 1794 SHRQAVKRIFRYLRATIDYGIWYSSSSCLSLRAFSDADFAGCRIDRKSTSGTCQFLGTSL 1853

Query: 1476 VS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSINIA 1297
            VS +++KQ+ VA S A+AEY+  ASCC+Q+LW+   L+DF + I  + +F DNTS+INIA
Sbjct: 1854 VSWSSRKQSGVAQSTAEAEYVAAASCCSQVLWMTSTLRDFGLVIDSVPLFCDNTSAINIA 1913

Query: 1296 KNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLELG 1117
            KNP+ H+ TK+IDIR H LRD+VEK  I +    +D Q+A+IF K L    F     ELG
Sbjct: 1914 KNPVQHSRTKHIDIRFHFLRDHVEKGDIVLQFVESDHQLADIFTKPLDSSRFSALRGELG 1973

Query: 1116 MI 1111
            ++
Sbjct: 1974 VV 1975



 Score =  135 bits (339), Expect(4) = 2e-89
 Identities = 62/132 (46%), Positives = 86/132 (65%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  +YP+H++K+ K LYGLKQ PR WYERL  +LL +G   G +D  LF++    + L
Sbjct: 1601 GFENPKYPNHVFKLSKALYGLKQAPRAWYERLKSYLLSHGFEMGKVDKTLFIRRHGSDFL 1660

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  + ++            EL+FFLG QIKQT  GT +HQ KY
Sbjct: 1661 LVQIYVDDIIFGGSSHTLVSQFSDVMSSEFEMSMMGELSFFLGFQIKQTREGTFLHQGKY 1720

Query: 1891 VKELHKRFKMED 1856
             ++L KRF M D
Sbjct: 1721 TRDLLKRFDMSD 1732



 Score = 61.2 bits (147), Expect(4) = 2e-89
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K + T +++T  LD DE G  ++ K ++ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1730 MSDGKPVSTPMASTAYLDPDEDGEPVDQKEFRSMIGSLLYLTASRPDIHFSVCLCARF 1787



 Score = 45.8 bits (107), Expect(4) = 2e-89
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F LYQMDVKS+F
Sbjct: 1549 FEETFAPVARLEAIRILLAFAASKGFKLYQMDVKSAF 1585


>gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2112

 Score =  161 bits (408), Expect(4) = 5e-89
 Identities = 89/176 (50%), Positives = 114/176 (64%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK  S  GLWY + + F L+GY+  +YA   VDRKSTS     LG 
Sbjct: 1395 KECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYASCKVDRKSTSGSCQMLGR 1454

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSVALS A+AEY++  SCCAQ+LW+KQ L D+ ++     +  DN  +I 
Sbjct: 1455 SLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDRAIK 1514

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEK 1135
            IA NP+ H+ TK+IDIRHH LRD+V K  I I    T+ Q+A+IF K L    F K
Sbjct: 1515 IANNPVQHSRTKHIDIRHHFLRDHVTKCDIVISHIRTEDQLADIFTKPLNETRFCK 1570



 Score =  127 bits (319), Expect(4) = 5e-89
 Identities = 63/132 (47%), Positives = 81/132 (61%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  + P+H+YK+ K LYGLKQ PR WYERL  FLL      G ++  LF K    +  
Sbjct: 1204 GFEDPKNPNHVYKLSKALYGLKQAPRAWYERLRYFLLSKDFKIGKVNTTLFTKIIGDDFF 1263

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VDD+IFG+T+E   KE  +            ELNFFLG+QIKQ   GT + Q KY
Sbjct: 1264 VCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKY 1323

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 1324 IKDLLKRFGLED 1335



 Score = 67.4 bits (163), Expect(4) = 5e-89
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T   LDLD+ G  ++ KLY+ MIGSLLYLTAS P+I+FSV +CARF
Sbjct: 1333 LEDAKPIKTPMATNGHLDLDKGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARF 1390



 Score = 43.9 bits (102), Expect(4) = 5e-89
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PVAR E IR+ +AF++  +  L+QMDVKS+F
Sbjct: 1152 FGETFAPVARLEAIRILLAFASCFDIKLFQMDVKSAF 1188


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score =  152 bits (383), Expect(4) = 6e-89
 Identities = 75/175 (42%), Positives = 119/175 (68%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            ++SHL  VK I R LK  ++ GL Y +  ++ L+G+   +YA   ++RKSTS    FLG 
Sbjct: 1467 RESHLTAVKIIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGE 1526

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             L+S A+K+Q ++A+S A+AEYI+ ASCC Q+LW+K QL+D+ +N   I I+ DNT++I 
Sbjct: 1527 NLISWASKRQVTIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAIC 1586

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFE 1138
            ++KNP+ H+  K+I+I+HH +RD V+K ++ +    T+ Q A+IF K L  + F+
Sbjct: 1587 LSKNPILHSRAKHIEIKHHFIRDYVQKGILDLQFIDTEHQWADIFTKPLSVERFD 1641



 Score =  141 bits (355), Expect(4) = 6e-89
 Identities = 66/132 (50%), Positives = 89/132 (67%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE +++PDH+YK+ K LYGLKQ PR WY+RLS FL+ N   RG +D  LF +   K++L
Sbjct: 1276 GFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDIL 1335

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG+T+ SL KE +             EL FFL +QI Q+  G  +HQ KY
Sbjct: 1336 IVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLVIQINQSKEGVYVHQTKY 1395

Query: 1891 VKELHKRFKMED 1856
             KEL K+FK+ED
Sbjct: 1396 TKELLKKFKLED 1407



 Score = 64.3 bits (155), Expect(4) = 6e-89
 Identities = 32/59 (54%), Positives = 45/59 (76%)
 Frame = -1

Query: 1850 QMEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            ++ED K + T +  T  L  ++ G++++ KLY+GMIGSLLYLTAS P+I+FSV LCARF
Sbjct: 1404 KLEDCKVMYTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARF 1462



 Score = 42.4 bits (98), Expect(4) = 6e-89
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSS 2287
            Y ETF PVAR E IRL ++++     ILYQMDVKS+
Sbjct: 1224 YTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSA 1259


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score =  161 bits (408), Expect(4) = 3e-88
 Identities = 83/186 (44%), Positives = 123/186 (66%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            + SH + VK I R +K   + G+WY   S  ++  ++  ++A   +DRKSTS   HFLG+
Sbjct: 1606 RTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGT 1665

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +++KQ+SVA S A+AEY+  AS C+Q+LW+   LKD+ ++   + +  DNTS+IN
Sbjct: 1666 SLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAIN 1725

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IAKNP+ H+ TK+I+IR+H LRDNVEK  I +    ++ Q+A+IF K L R  FE    E
Sbjct: 1726 IAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSE 1785

Query: 1122 LGMIKI 1105
            LG+I +
Sbjct: 1786 LGVIGV 1791



 Score =  130 bits (327), Expect(4) = 3e-88
 Identities = 63/132 (47%), Positives = 84/132 (63%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  ++P+H++K++K LYGLKQ PR WYERL  FLL NG   G +D  LF      + L
Sbjct: 1415 GFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFL 1474

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  + ++            EL FFLG+QIKQT  G  +HQ KY
Sbjct: 1475 LVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKY 1534

Query: 1891 VKELHKRFKMED 1856
             KEL K+F M D
Sbjct: 1535 SKELLKKFDMAD 1546



 Score = 61.2 bits (147), Expect(4) = 3e-88
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K I T ++TT+ L  DE G  ++ + Y+ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1544 MADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARF 1601



 Score = 44.3 bits (103), Expect(4) = 3e-88
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F L+QMDVKS+F
Sbjct: 1363 FEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAF 1399


>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score =  161 bits (407), Expect(4) = 3e-88
 Identities = 83/184 (45%), Positives = 122/184 (66%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            + SH + VK I R +K   + G+WY   S  ++  ++  ++A   +DRKSTS   HFLG+
Sbjct: 1610 RTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGT 1669

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +++KQ+SVA S A+AEY+  AS C+Q+LW+   LKD+ ++   + +  DNTS+IN
Sbjct: 1670 SLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAIN 1729

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IAKNP+ H+ TK+I+IR+H LRDNVEK  I +    ++ Q+A+IF K L R  FE    E
Sbjct: 1730 IAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSE 1789

Query: 1122 LGMI 1111
            LG+I
Sbjct: 1790 LGVI 1793



 Score =  130 bits (328), Expect(4) = 3e-88
 Identities = 64/132 (48%), Positives = 83/132 (62%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  ++P+H++K+DK LYGLKQ PR WYERL  FLL NG   G +D  LF      + L
Sbjct: 1419 GFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFL 1478

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  +  +            EL FFLG+QIKQT  G  +HQ KY
Sbjct: 1479 LVQIYVDDIIFGGSSHALVAQFFDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKY 1538

Query: 1891 VKELHKRFKMED 1856
             KEL K+F M D
Sbjct: 1539 SKELLKKFDMAD 1550



 Score = 61.2 bits (147), Expect(4) = 3e-88
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K I T ++TT+ L  DE G  ++ + Y+ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1548 MADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARF 1605



 Score = 44.3 bits (103), Expect(4) = 3e-88
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F L+QMDVKS+F
Sbjct: 1367 FEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAF 1403


>gb|AAS98452.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1005

 Score =  158 bits (400), Expect(4) = 3e-88
 Identities = 91/190 (47%), Positives = 120/190 (63%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK     GLWY + + F L+GY+  +YA   VDRKSTS     LG 
Sbjct: 816  KECHLVAVKRILRYLKHSCTIGLWYPKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLGR 875

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSV LS A+AEY++  S CAQ+LW+KQ L D+ ++    ++  DN S+I 
Sbjct: 876  SLVSWSSKKQNSVDLSTAEAEYVSAGSYCAQLLWMKQTLLDYGISFTKTTLLCDNDSAIK 935

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IA NP+ H+ TK+IDIRHH LR +V K  I I    T+ Q+A+IF K L   HF K   E
Sbjct: 936  IANNPVQHSRTKHIDIRHHFLRHHVAKCDIVISHIRTEDQLADIFTKPLDETHFCKLRNE 995

Query: 1122 LGMIKIT*VS 1093
            L +I  + V+
Sbjct: 996  LNVIDFSNVA 1005



 Score =  127 bits (320), Expect(4) = 3e-88
 Identities = 62/132 (46%), Positives = 81/132 (61%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  + P+H+YK+ K LYGLKQ PR WYERL  FLL      G +D  +F K    +  
Sbjct: 625  GFEDPKNPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTIFTKIIGDDFF 684

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VDD+IFG+T+E   KE  +            EL+FFLG+QIKQ   GT + Q KY
Sbjct: 685  VCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIRELSFFLGLQIKQLKDGTFVSQTKY 744

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 745  IKDLLKRFSLED 756



 Score = 67.4 bits (163), Expect(4) = 3e-88
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T    DLDE G  ++ KLY+ MIGSLLYLTAS P+I+FSV +CARF
Sbjct: 754  LEDAKPIKTPMATNGHFDLDEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARF 811



 Score = 43.9 bits (102), Expect(4) = 3e-88
 Identities = 19/37 (51%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PVAR EDIR+ + F++  +  L+Q+DVKS+F
Sbjct: 573  FGETFAPVARLEDIRILLTFASCFDIKLFQIDVKSAF 609


>emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]
          Length = 711

 Score =  165 bits (417), Expect(4) = 4e-88
 Identities = 93/184 (50%), Positives = 119/184 (64%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK  S  GLWY + + F L+GY+  +YA   VDRKSTS     LG 
Sbjct: 522  KECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLGR 581

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSVALS A+AEY++  SCCAQ+LW+KQ L D+ ++     +  DN S+I 
Sbjct: 582  SLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTLLLCDNDSAIK 641

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IA NP+ H+ TK+IDIRHH LRD+V K  I I    T+ Q+A+IF K L    F K   E
Sbjct: 642  IANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNE 701

Query: 1122 LGMI 1111
            L +I
Sbjct: 702  LNVI 705



 Score =  121 bits (304), Expect(4) = 4e-88
 Identities = 61/132 (46%), Positives = 79/132 (59%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  +  +H+YK+ K LYGLKQ PR WYERL  FLL      G +D  LF K    +  
Sbjct: 331  GFEDPKNSNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFF 390

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VDD+IFG+T+E   KE  +            EL+FFLG+QIKQ   G  + Q KY
Sbjct: 391  VCQIYVDDIIFGSTNEVFCKEFDDMMFREFEMSMIEELSFFLGLQIKQLKDGMFVSQTKY 450

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 451  IKDLLKRFGLED 462



 Score = 68.6 bits (166), Expect(4) = 4e-88
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T   LDLDE G L++ KLY+ MIGSLLY T S P+I+FSV +CARF
Sbjct: 460  LEDAKPIKTPMATNGHLDLDEGGKLVDLKLYRSMIGSLLYFTVSRPDIMFSVCMCARF 517



 Score = 42.0 bits (97), Expect(4) = 4e-88
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF P+ R E IR+ +AF++  +  L+QMDVKS+F
Sbjct: 279  FGETFAPIVRLEAIRILLAFASCFDIKLFQMDVKSAF 315


>gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1577

 Score =  164 bits (415), Expect(4) = 5e-88
 Identities = 93/190 (48%), Positives = 121/190 (63%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK  S  GLWY + + F L+GY+  +YA   VDRKSTSS    LG 
Sbjct: 1388 KECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDYAGCKVDRKSTSSSCQMLGR 1447

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS ++KKQNSVALS A+ EY++  SCCAQ+LW+KQ L D+ ++     +  DN  +I 
Sbjct: 1448 SLVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDGAIK 1507

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IA NP+ H+ TK+IDIRHH LRD+V K  I I    T+ Q+A+IF K L    F K   E
Sbjct: 1508 IANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNE 1567

Query: 1122 LGMIKIT*VS 1093
            L +I  + V+
Sbjct: 1568 LNIIDFSNVA 1577



 Score =  124 bits (311), Expect(4) = 5e-88
 Identities = 60/127 (47%), Positives = 79/127 (62%)
 Frame = -2

Query: 2236 EYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLLVVQVF 2057
            +YP+H+YK+ K LYGL+Q PR WYERL  FLL      G +D  LF K    +  V Q++
Sbjct: 1202 KYPNHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFTKIIGDDFFVYQIY 1261

Query: 2056 VDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKYVKELH 1877
            VDD+IFG+T+E   KE  +            EL+FFLG+QIKQ   GT + Q KY+K+L 
Sbjct: 1262 VDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNGTFVSQTKYIKDLL 1321

Query: 1876 KRFKMED 1856
            KRF +ED
Sbjct: 1322 KRFGLED 1328



 Score = 67.4 bits (163), Expect(4) = 5e-88
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T   LDLDE G  ++ KLY+ MIGSLLYLT S P+I+FSV +CARF
Sbjct: 1326 LEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTVSRPDIMFSVCMCARF 1383



 Score = 40.8 bits (94), Expect(4) = 5e-88
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PVAR E I + +AF++  +  L+QMDVKS+F
Sbjct: 1161 FGETFAPVARLEAICILLAFASCFDIKLFQMDVKSAF 1197


>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
          Length = 2256

 Score =  160 bits (405), Expect(4) = 7e-88
 Identities = 82/186 (44%), Positives = 123/186 (66%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            + SH + VK + R +K   + G+WY   S  ++  ++  ++A   +DRKSTS   HFLG+
Sbjct: 1585 RTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGT 1644

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +++KQ+SVA S A+AEY+  AS C+Q+LW+   LKD+ ++   + +  DNTS+IN
Sbjct: 1645 SLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAIN 1704

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IAKNP+ H+ TK+I+IR+H LRDNVEK  I +    ++ Q+A+IF K L R  FE    E
Sbjct: 1705 IAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSE 1764

Query: 1122 LGMIKI 1105
            LG+I +
Sbjct: 1765 LGVIGV 1770



 Score =  130 bits (327), Expect(4) = 7e-88
 Identities = 63/132 (47%), Positives = 84/132 (63%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  ++P+H++K++K LYGLKQ PR WYERL  FLL NG   G +D  LF      + L
Sbjct: 1394 GFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFL 1453

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  + ++            EL FFLG+QIKQT  G  +HQ KY
Sbjct: 1454 LVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKY 1513

Query: 1891 VKELHKRFKMED 1856
             KEL K+F M D
Sbjct: 1514 SKELLKKFDMAD 1525



 Score = 61.2 bits (147), Expect(4) = 7e-88
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K I T ++TT+ L  DE G  ++ + Y+ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1523 MADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARF 1580



 Score = 44.3 bits (103), Expect(4) = 7e-88
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F L+QMDVKS+F
Sbjct: 1342 FEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAF 1378


>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group]
          Length = 2145

 Score =  160 bits (405), Expect(4) = 7e-88
 Identities = 82/186 (44%), Positives = 123/186 (66%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            + SH + VK + R +K   + G+WY   S  ++  ++  ++A   +DRKSTS   HFLG+
Sbjct: 1606 RTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGT 1665

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +++KQ+SVA S A+AEY+  AS C+Q+LW+   LKD+ ++   + +  DNTS+IN
Sbjct: 1666 SLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAIN 1725

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IAKNP+ H+ TK+I+IR+H LRDNVEK  I +    ++ Q+A+IF K L R  FE    E
Sbjct: 1726 IAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSE 1785

Query: 1122 LGMIKI 1105
            LG+I +
Sbjct: 1786 LGVIGV 1791



 Score =  130 bits (327), Expect(4) = 7e-88
 Identities = 63/132 (47%), Positives = 84/132 (63%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  ++P+H++K++K LYGLKQ PR WYERL  FLL NG   G +D  LF      + L
Sbjct: 1415 GFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFL 1474

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  + ++            EL FFLG+QIKQT  G  +HQ KY
Sbjct: 1475 LVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKY 1534

Query: 1891 VKELHKRFKMED 1856
             KEL K+F M D
Sbjct: 1535 SKELLKKFDMAD 1546



 Score = 61.2 bits (147), Expect(4) = 7e-88
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K I T ++TT+ L  DE G  ++ + Y+ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1544 MADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARF 1601



 Score = 44.3 bits (103), Expect(4) = 7e-88
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F L+QMDVKS+F
Sbjct: 1363 FEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAF 1399


>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2124

 Score =  160 bits (405), Expect(4) = 7e-88
 Identities = 82/186 (44%), Positives = 123/186 (66%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            + SH + VK + R +K   + G+WY   S  ++  ++  ++A   +DRKSTS   HFLG+
Sbjct: 1585 RTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGT 1644

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +++KQ+SVA S A+AEY+  AS C+Q+LW+   LKD+ ++   + +  DNTS+IN
Sbjct: 1645 SLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAIN 1704

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IAKNP+ H+ TK+I+IR+H LRDNVEK  I +    ++ Q+A+IF K L R  FE    E
Sbjct: 1705 IAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSE 1764

Query: 1122 LGMIKI 1105
            LG+I +
Sbjct: 1765 LGVIGV 1770



 Score =  130 bits (327), Expect(4) = 7e-88
 Identities = 63/132 (47%), Positives = 84/132 (63%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  ++P+H++K++K LYGLKQ PR WYERL  FLL NG   G +D  LF      + L
Sbjct: 1394 GFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFL 1453

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  + ++            EL FFLG+QIKQT  G  +HQ KY
Sbjct: 1454 LVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKY 1513

Query: 1891 VKELHKRFKMED 1856
             KEL K+F M D
Sbjct: 1514 SKELLKKFDMAD 1525



 Score = 61.2 bits (147), Expect(4) = 7e-88
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K I T ++TT+ L  DE G  ++ + Y+ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1523 MADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARF 1580



 Score = 44.3 bits (103), Expect(4) = 7e-88
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F L+QMDVKS+F
Sbjct: 1342 FEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAF 1378


>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1948

 Score =  160 bits (405), Expect(4) = 7e-88
 Identities = 82/186 (44%), Positives = 123/186 (66%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            + SH + VK + R +K   + G+WY   S  ++  ++  ++A   +DRKSTS   HFLG+
Sbjct: 1585 RTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGT 1644

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNIYYISIFYDNTSSIN 1303
             LVS +++KQ+SVA S A+AEY+  AS C+Q+LW+   LKD+ ++   + +  DNTS+IN
Sbjct: 1645 SLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLCDNTSAIN 1704

Query: 1302 IAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNWLE 1123
            IAKNP+ H+ TK+I+IR+H LRDNVEK  I +    ++ Q+A+IF K L R  FE    E
Sbjct: 1705 IAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSRFEFLRSE 1764

Query: 1122 LGMIKI 1105
            LG+I +
Sbjct: 1765 LGVIGV 1770



 Score =  130 bits (327), Expect(4) = 7e-88
 Identities = 63/132 (47%), Positives = 84/132 (63%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GFE  ++P+H++K++K LYGLKQ PR WYERL  FLL NG   G +D  LF      + L
Sbjct: 1394 GFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFL 1453

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            +VQ++VDD+IFG +S +L  + ++            EL FFLG+QIKQT  G  +HQ KY
Sbjct: 1454 LVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKY 1513

Query: 1891 VKELHKRFKMED 1856
             KEL K+F M D
Sbjct: 1514 SKELLKKFDMAD 1525



 Score = 61.2 bits (147), Expect(4) = 7e-88
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            M D K I T ++TT+ L  DE G  ++ + Y+ MIGSLLYLTAS P+I FSV LCARF
Sbjct: 1523 MADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARF 1580



 Score = 44.3 bits (103), Expect(4) = 7e-88
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            ++ETF PVAR E IR+ +AF+    F L+QMDVKS+F
Sbjct: 1342 FEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAF 1378


>gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1128

 Score =  156 bits (395), Expect(4) = 2e-87
 Identities = 93/192 (48%), Positives = 120/192 (62%), Gaps = 2/192 (1%)
 Frame = -3

Query: 1662 KKSHLKTVKWILR*LKEISDQGLWYLRESNFNLMGYAYVNYAWYLVDRKSTSSMAHFLGS 1483
            K+ HL  VK ILR LK  S   LWY + + F L+GY+  +YA Y VDRKSTS     LG 
Sbjct: 937  KECHLVAVKRILRYLKHSSTISLWYPKGAKFKLVGYSDSDYAGYKVDRKSTSGSCQMLGR 996

Query: 1482 CLVS*ATKKQNSVALSIAKAEYITVASCCAQMLWIKQQLKDFCMNI--YYISIFYDNTSS 1309
             LVS ++KKQNSVALS A+AEYI+  SCCAQ+LW+KQ L D+ ++       +  +N S+
Sbjct: 997  SLVSWSSKKQNSVALSTAEAEYISAGSCCAQLLWMKQILLDYGISFTETQTPLLCNNDST 1056

Query: 1308 INIAKNPMHHNITKNIDIRHHILRDNVEKDLISIYLCATD*QIANIFIKALGRDHFEKNW 1129
            I IA NP+ H  TK+IDIRHH L D+V K  I I    T+ Q+A+IF K L    F K  
Sbjct: 1057 IKIANNPVQHFRTKHIDIRHHFLTDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLR 1116

Query: 1128 LELGMIKIT*VS 1093
             EL +I  + V+
Sbjct: 1117 NELNVINFSNVA 1128



 Score =  130 bits (326), Expect(4) = 2e-87
 Identities = 63/132 (47%), Positives = 82/132 (62%)
 Frame = -2

Query: 2251 GFEYVEYPDHIYKMDKVLYGLKQTPRVWYERLSKFLLGNGHTRGNIDNILFLKAKAKNLL 2072
            GF+  +YP+H+YK+ K LYGLKQ PR WYERL  FLL      G +D  LF K    +  
Sbjct: 746  GFDDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFF 805

Query: 2071 VVQVFVDDVIFGATSESLSKELANXXXXXXXXXXXXELNFFLGVQIKQTSIGTIIHQQKY 1892
            V Q++VDD+IFG+T+E   KE  +            EL+FFLG+QIKQ   GT + Q KY
Sbjct: 806  VCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIEELSFFLGLQIKQLKDGTFVSQTKY 865

Query: 1891 VKELHKRFKMED 1856
            +K+L KRF +ED
Sbjct: 866  IKDLLKRFGLED 877



 Score = 64.7 bits (156), Expect(4) = 2e-87
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = -1

Query: 1847 MEDFKSIDTLISTTTKLDLDEPGSLIE*KLYKGMIGSLLYLTASIPNIVFSVGLCARF 1674
            +ED K I T ++T   LDLDE G  ++ KLY+ MIGSLLYLTAS P+I+FSV + ARF
Sbjct: 875  LEDAKPIKTPMATNWHLDLDEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMYARF 932



 Score = 43.5 bits (101), Expect(4) = 2e-87
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = -3

Query: 2394 YDETFFPVARQEDIRLFIAFSTYIEFILYQMDVKSSF 2284
            + ETF PVAR E IR+ +AF++  +  L+QMDVKS+F
Sbjct: 694  FGETFGPVARLEAIRILLAFASCFDIKLFQMDVKSAF 730