BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00022138
         (1282 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595...   155   3e-35
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...   149   2e-33
ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578...   126   2e-26
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    89   3e-25
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    89   1e-24
gb|ABI34321.1| RNase H family protein [Solanum demissum]               85   9e-22
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    90   2e-21
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    79   4e-21
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    85   1e-20
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    97   1e-20
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    91   1e-19
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    89   3e-19
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...    68   4e-19
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...   100   1e-18
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...   100   1e-18
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    80   3e-18
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    90   3e-18
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...    83   9e-18
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...    84   9e-18
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A...    95   5e-17

>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
          Length = 1079

 Score =  155 bits (393), Expect = 3e-35
 Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 4/185 (2%)
 Frame = +1

Query: 592  SNW*RMKWLKPPPLFIKLNSDGSCVDGRCGGEG----SDGCFIMAYSLTLDESTSNSAEA 759
            +N+ ++KWLKP   F+K+NSDGSC DG CGG G      G  + AYSL L + TSN AEA
Sbjct: 895  TNFIQVKWLKPSISFVKINSDGSCKDGYCGGGGVIRDHSGSLVFAYSLNLGQGTSNWAEA 954

Query: 760  SALLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHDIRTR 939
             ALLYG++WCI++    I+ E+DS +L + ++    TPWRI + V E+K           
Sbjct: 955  KALLYGVQWCISSGHEFILAESDSRLLVDCVNNSSVTPWRILEEVNELKNHMETTGFILN 1014

Query: 940  HCYREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTL 1119
            HCYREA + AD LA+ S +     +Y  F  LP +++G++  DR  + SFR ++KK   L
Sbjct: 1015 HCYREANQAADALASTSFSSPGNILYEYFEELPAKVKGLMTMDRWGVTSFRTRQKKKQDL 1074

Query: 1120 TYEPP 1134
             ++PP
Sbjct: 1075 IWDPP 1079


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score =  149 bits (377), Expect = 2e-33
 Identities = 72/167 (43%), Positives = 110/167 (65%), Gaps = 4/167 (2%)
 Frame = +1

Query: 604  RMKWLKPPPLFIKLNSDGSCVDGRCGGEG----SDGCFIMAYSLTLDESTSNSAEASALL 771
            R+ W+KPP +F KLN+DGSCV+GRCGG G    + G  IMA+++ L E TS+ AEA ++L
Sbjct: 989  RVNWIKPPTMFAKLNTDGSCVNGRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSML 1048

Query: 772  YGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHDIRTRHCYR 951
            +G++ CI    N+II ETDS++L  +I+  W  PWR+   V++I+     H     HC R
Sbjct: 1049 HGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLR 1108

Query: 952  EAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFR 1092
            EA + ADKLA++S + +   ++ ++  LP  ++G++N DR  LP+FR
Sbjct: 1109 EANQPADKLASISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


>ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578253 [Solanum tuberosum]
          Length = 277

 Score =  126 bits (317), Expect = 2e-26
 Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 4/131 (3%)
 Frame = +1

Query: 613 WLKPPPLFIKLNSDGSCVDGRCGGEG----SDGCFIMAYSLTLDESTSNSAEASALLYGL 780
           W+KPP L +KLNSDGS  +G+ G  G     +G FI AYS+ L   TSN+ EA ALLYGL
Sbjct: 143 WIKPPSLRVKLNSDGSFSNGQSGSGGIIRDQEGDFIFAYSIPLGNGTSNTVEAEALLYGL 202

Query: 781 KWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHDIRTRHCYREAY 960
           +WC +    + I ETDSL+L  +I  EW +PW+IS+ V+EI+     H     HC++EA 
Sbjct: 203 QWCASKGMEMAIGETDSLLLSKTIKREWKSPWKISNQVQEIQKMIEDHKFSIVHCFKEAN 262

Query: 961 RVADKLATLSN 993
           + AD LA L++
Sbjct: 263 KPADALARLTS 273


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 389

 Score = 88.6 bits (218), Expect(3) = 3e-25
 Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCVD--GRCGGEG----SDGCFIMAYSLTLDESTSNSAEASAL 768
            + W +PP    KLN+DGS     G+ GG G      G  I A+++ L   T+N AE  A 
Sbjct: 210  VNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAA 269

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHDI-RTRHC 945
            L+GL+WC  + F  II E DS +L   I  +   PWR    +++I+  SN+ ++ + +H 
Sbjct: 270  LHGLQWCQQHGFEKIILEVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCKHI 329

Query: 946  YREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
            YREA   AD LA  S++ + +  + T   L   I+G    ++  +  FR +K K
Sbjct: 330  YREANGTADLLAKWSHSMDIIQQFYTSQQLEGVIKGSYILEKMGMQLFRRRKLK 383



 Score = 45.1 bits (105), Expect(3) = 3e-25
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
 Frame = +3

Query: 390 NYMHKL----MPPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKITIE 557
           N +HKL    +P II W LW++R ++++  +   + R +  I  +I QIIK+ +  I  +
Sbjct: 129 NEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQIIKAVYPNIPWQ 188

Query: 558 DNWEDVCNLYE 590
            +WE + NL E
Sbjct: 189 SSWERLFNLVE 199



 Score = 30.0 bits (66), Expect(3) = 3e-25
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 236 QGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELLTAGNKKGKSHGKLH 397
           +G ++  H+   G +A+ + K    RLGI   N NLR  L +  ++  S+ ++H
Sbjct: 80  KGKDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSW-RRLTSYNEVH 132


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score = 89.4 bits (220), Expect(3) = 1e-24
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCVD--GRCGGEGS----DGCFIMAYSLTLDESTSNSAEASAL 768
            + W KP     KLN+DGS +   G+ GG G+     G  + A+S+     T+N AE  A 
Sbjct: 1154 VSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAA 1213

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNR-HDIRTRHC 945
            LYG++WC  + +  +  E +S +L N I      PWR  D V++I+  S +       H 
Sbjct: 1214 LYGMEWCEQHGYKKVELEVNSELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFHCHHI 1273

Query: 946  YREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
            YREA   AD L+  SNN E +  + T   L   I+G    ++  + +FR +K K
Sbjct: 1274 YREANNTADLLSKWSNNCEIVQHFYTTRQLEGAIKGSYILEKMGVQNFRRRKLK 1327



 Score = 45.8 bits (107), Expect(3) = 1e-24
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
 Frame = +3

Query: 372  RENPMANYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHF 539
            R   + N +HKL+    P II W LW++R   ++  ++  + R K  I   + Q+IK  F
Sbjct: 1067 RNQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEVMQVIKLVF 1126

Query: 540  KKITIEDNWEDVCNLYE 590
              I  + NW ++ N+ E
Sbjct: 1127 PSIPWQSNWNNLVNIIE 1143



 Score = 26.6 bits (57), Expect(3) = 1e-24
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 236  QGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELL 355
            +G ++ +H+  NG +A+ + K     LGI   N  LR  L
Sbjct: 1024 KGKDDINHILINGNFAKYIWKIHAATLGIIPVNTTLRAQL 1063


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 85.1 bits (209), Expect(3) = 9e-22
 Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
 Frame = +1

Query: 598  W*RMKWLKPPPLFIKLNSDGSCVDGRCG----GEGSDGCFIMAYSLTLDESTSNSAEASA 765
            W  + W  P    +K+N+DGS   G  G            IMA+S+    S++N AEA A
Sbjct: 742  WKIVHWNTPNINCVKINTDGSFSSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALA 801

Query: 766  LLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHDIRTRHC 945
              +G+ WC+   F+    E DS ++ + +     T  +I   VE+I     + +    HC
Sbjct: 802  ARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNHC 861

Query: 946  YREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTLTY 1125
            YREA +VAD LA  +    E  +Y+ +  +P+   G    D+ Q+PS R++  K++   Y
Sbjct: 862  YREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIRYDKSNFFKY 921



 Score = 39.3 bits (90), Expect(3) = 9e-22
 Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 378 NPMANYMHKLMPPIIIWELWRSRRNSRF-DMEKLLLQRSKDMITFNITQIIKSHFKKITI 554
           N + N +   +P +I WE+W+ R   ++ D +K+  +  ++ + +N+   ++  F    I
Sbjct: 663 NSIHNVIIHTLPILIFWEIWKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEI 722

Query: 555 EDNWEDVCNLYE 590
            ++W D+ N  E
Sbjct: 723 GNSWRDLLNKVE 734



 Score = 27.3 bits (59), Expect(3) = 9e-22
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 194 IDSKCSYCTDISMIQGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELL 355
           IDS C  C ++      E  +H+F N   A  + K F G LGI+ +  +   LL
Sbjct: 604 IDSNCVCCKNMKT----ETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLL 653


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 89.7 bits (221), Expect(2) = 2e-21
 Identities = 62/174 (35%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCVD--GRCGGEG----SDGCFIMAYSLTLDESTSNSAEASAL 768
            +KW KP     KLN+DGS +   G+ GG G    + G  I A+SL     T+N AE  A 
Sbjct: 1275 VKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAA 1334

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHD-IRTRHC 945
            L+GL WC  + +  I  E DS +L N I+   + PWR  + +++I     + D  +  H 
Sbjct: 1335 LHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHI 1394

Query: 946  YREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
            YREA   AD L+  S+N E L  + T   L   IRG    ++  + +FR +K K
Sbjct: 1395 YREANCTADLLSKWSHNLEILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRRKLK 1448



 Score = 41.2 bits (95), Expect(2) = 2e-21
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = +3

Query: 357  LLETKRENPMANYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQI 524
            LL   R     N +HKL+    P  I W LW++R   ++ ++   + R +  I  NI Q+
Sbjct: 1183 LLLQWRNQQYTNEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNIMQV 1242

Query: 525  IKSHFKKITIEDNWEDVCNLYE 590
            I   F  I  + +W ++ N+ E
Sbjct: 1243 ITIVFPSIPWQTSWNNLINIVE 1264


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 79.3 bits (194), Expect(3) = 4e-21
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCVD--GRCGGEG----SDGCFIMAYSLTLDESTSNSAEASAL 768
            + W KP     KLN+DGS +   G+ GG G      G  + A+SL     T+N AE  A 
Sbjct: 1082 VSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAA 1141

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNR-HDIRTRHC 945
            LYGL+WC  + +  +  E DS +L N I  + + PW   D +++IK  + +    +  H 
Sbjct: 1142 LYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIEQFQCHHI 1201

Query: 946  YREAYRVADKLATLSNNHE 1002
            YREA   AD L+  S++ E
Sbjct: 1202 YREANITADLLSKWSHSLE 1220



 Score = 40.4 bits (93), Expect(3) = 4e-21
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +3

Query: 372  RENPMANYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHF 539
            R   + N +HKL+    P +I W LW++R   ++  +   + R +  I  ++ Q+IK  F
Sbjct: 995  RNQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKIVF 1054

Query: 540  KKITIEDNWEDVCNLYE 590
              I  + +W  + N+ E
Sbjct: 1055 PSIPWQSSWNKLINIVE 1071



 Score = 29.6 bits (65), Expect(3) = 4e-21
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 200  SKCSYCTDISMIQGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELL 355
            SKC  C      +G ++ +H+  NG +A+ + K     LG+   N  LR+ L
Sbjct: 944  SKCYCCYS----KGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQL 991


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score = 84.7 bits (208), Expect(3) = 1e-20
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
 Frame = +1

Query: 604  RMKWLKPPPLFIKLNSDGSCVDG--RCGGEG----SDGCFIMAYSLTLDESTSNSAEASA 765
            ++ W KP     KLN+DGS +    + GG G     +G  I A+++     T+N AE  A
Sbjct: 830  KVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKA 889

Query: 766  LLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHD-IRTRH 942
             LYGL WC  + +  II E DS +L   I    + PWR   T+ +I+   N+ +  + +H
Sbjct: 890  ALYGLSWCEQHGYKRIILEVDSELLSKWIDNSINIPWRCQPTIYQIQDIVNKMEYFQCQH 949

Query: 943  CYREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
             +REA   AD LA  S+  + +  + T   L   IRG    ++  + SFR +K K
Sbjct: 950  IFREANGTADLLAKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKMGVQSFRRRKLK 1004



 Score = 33.9 bits (76), Expect(3) = 1e-20
 Identities = 17/71 (23%), Positives = 36/71 (50%)
 Frame = +3

Query: 378 NPMANYMHKLMPPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKITIE 557
           N +   +++++P  I W LW++R   +   ++   QR +  I  +  Q +   F  I+ +
Sbjct: 750 NQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRVQYAIFKDTMQAVMVAFPNISRQ 809

Query: 558 DNWEDVCNLYE 590
           +N + + NL E
Sbjct: 810 NNLDMLINLAE 820



 Score = 29.3 bits (64), Expect(3) = 1e-20
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +2

Query: 194 IDSKCSYCTDISMIQGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELL 355
           +D +  YC      +G ++  H+   G +A+ + K    RLG+   + NLR LL
Sbjct: 690 MDEQECYCC---FRKGKDDILHILITGNFAKYIWKIHATRLGVHQDHANLRSLL 740


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 316

 Score = 96.7 bits (239), Expect(3) = 1e-20
 Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
 Frame = +1

Query: 604  RMKWLKPPPLFIKLNSDGSCVD--GRCGGEG----SDGCFIMAYSLTLDESTSNSAEASA 765
            ++ W +PP  +IK+N+DGS ++  G+ G  G    ++G  ++A++ +L E ++N AE  A
Sbjct: 136  KVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEA 195

Query: 766  LLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNR-HDIRTRH 942
              +GL W I+ D+  II E DS I+   I+ +    W +S+ +E+I+    R H  +  H
Sbjct: 196  AQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKCEH 255

Query: 943  CYREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTLT 1122
             +REA   AD L+  S+      +Y     +P++ +     D   +PSFR +K K     
Sbjct: 256  IFREANWTADSLSKHSHGTTGPQLYFNNNQMPKEAQAYYRMDLMNMPSFRRKKTKK---I 312

Query: 1123 YEPP 1134
            +EPP
Sbjct: 313  FEPP 316



 Score = 28.1 bits (61), Expect(3) = 1e-20
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +3

Query: 390 NYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKITIE 557
           N  H+L+    P  + W LW++R   ++  +   + R K  I  +  +++++ F  I   
Sbjct: 56  NAGHQLLLQATPTFVCWNLWKNRCACKYGGKATNISRVKYAIYKDTFKMLQNTFPHIKWP 115

Query: 558 DNW 566
            NW
Sbjct: 116 SNW 118



 Score = 23.1 bits (48), Expect(3) = 1e-20
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 239 GPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELL 355
           G ++ +H F +G++A  V  FF    G++ +  +L+  L
Sbjct: 8   GLDSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARL 46


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 90.9 bits (224), Expect(2) = 1e-19
 Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
 Frame = +1

Query: 604  RMKWLKPPPLFIKLNSDGSCVD-------GRCGGEGSDGCFIMAYSLTLDESTSNSAEAS 762
            R+ W  P   ++K N+DG+C         G C  +   G  I A +  +  +T+  AE  
Sbjct: 697  RVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDK-GDLIYAKAKGIGIATNMEAETV 755

Query: 763  ALLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHDIRTRH 942
            A+L  L+ C N     +I ETDSL L+  I   W  PW+I++ VEEI+    +   +  H
Sbjct: 756  AILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITH 815

Query: 943  CYREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKK 1104
             +RE   +AD LA ++   +    Y+ F  LP + R +LN D+ Q+P+ R++ +
Sbjct: 816  IFREGNSLADSLANIAIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRIRTR 869



 Score = 33.5 bits (75), Expect(2) = 1e-19
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = +3

Query: 381 PMANYMHKLMPPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHF 539
           P    ++K +P II+W LW+ RRN+      +  +R  +M+   + +++KS F
Sbjct: 618 PKLQGIYKAIPAIIMWTLWK-RRNALKHDSSISWERMVEMVIEVVRKMVKSQF 669


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score = 89.4 bits (220), Expect(2) = 3e-19
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
 Frame = +1

Query: 613  WLKPPPLFIKLNSDGSCV--DGRCGGEG----SDGCFIMAYSLTLDESTSNSAEASALLY 774
            W +PP  +IK+N+DGS +   G CG  G     +G  ++A++  L + T+N AEA A L+
Sbjct: 494  WNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAALF 553

Query: 775  GLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEI-KYFSNRHDIRTRHCYR 951
            GL W +      I+ E DS ++   IS +    W + + +E I +      + +  H +R
Sbjct: 554  GLSWALELGHRNILIELDSQLVVQWISKKEPPHWNVINQIERIQQLIMQTQNFKCNHIFR 613

Query: 952  EAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
            EA  VAD L+  S+      +Y +   LPR+ +     D   +P+FR +K K
Sbjct: 614  EANWVADALSKHSHTIATPQVYFSNSQLPREAQAYYQMDLQNMPNFRRKKTK 665



 Score = 33.9 bits (76), Expect(2) = 3e-19
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +3

Query: 384 MANYMHKL----MPPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKIT 551
           + N  H+L    MP  I+W LW++R   ++  +   + R K  I  +  +++KS F  I 
Sbjct: 409 LRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCIN 468

Query: 552 IEDNW 566
              NW
Sbjct: 469 WPGNW 473


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 655

 Score = 67.8 bits (164), Expect(3) = 4e-19
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
 Frame = +1

Query: 607 MKWLKPPPLFIKLNSDGSCVD--GRCGGEGS----DGCFIMAYSLTLDESTSNSAEASAL 768
           + W KP     KLN+DGS +   G+ GG G      G  + A+S+     T+N AE  A 
Sbjct: 536 VSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAA 595

Query: 769 LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFS 915
           LYG++WC  + +  +  E DS +L N I      PWR  D V++I+  S
Sbjct: 596 LYGMQWCEQHGYKKVELEVDSELLFNWIKNTTKIPWRYEDLVQQIQQIS 644



 Score = 43.9 bits (102), Expect(3) = 4e-19
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
 Frame = +3

Query: 372 RENPMANYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHF 539
           R   + N +HKL+    P +I W LW++R   ++  ++  + R K  I   + QIIK  F
Sbjct: 449 RNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKEVMQIIKLVF 508

Query: 540 KKITIEDNWEDVCNLYE 590
             I  + NW ++ N+ E
Sbjct: 509 PSIPWQANWNNLVNIIE 525



 Score = 31.2 bits (69), Expect(3) = 4e-19
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 200 SKCSYCTDISMIQGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLR-ELLTAGNKK 373
           S CS C      +G ++ +H+  NG +A+ + K     LGI   N NLR +LL   N+K
Sbjct: 398 SDCSCCYR----KGKDDINHILINGNFAKYIWKIHAATLGIIPVNTNLRAQLLHWRNQK 452


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 468

 Score =  100 bits (250), Expect = 1e-18
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
 Frame = +1

Query: 604  RMKWLKPPPLFIKLNSDGSCV--DGRCGGEG----SDGCFIMAYSLTLDESTSNSAEASA 765
            ++ W KPP  +IK+N+DGS +  +G+ G  G     +G  IMA+S  L E ++N AE  A
Sbjct: 288  KVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEA 347

Query: 766  LLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEI-KYFSNRHDIRTRH 942
             L+GL W     F  I+ E DS ++   IS +   PW +++ +E + +      + R  H
Sbjct: 348  ALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRCCH 407

Query: 943  CYREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTLT 1122
             +REA  VAD L+  S+N+    +Y     LP++       D   +PSFR +K K   + 
Sbjct: 408  IFREANWVADALSKHSHNNTAPHVYVHSNQLPKEAHAYYQMDLMDMPSFRRKKTK---MI 464

Query: 1123 YEPP 1134
            +EPP
Sbjct: 465  FEPP 468


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 213

 Score =  100 bits (249), Expect = 1e-18
 Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
 Frame = +1

Query: 604  RMKWLKPPPLFIKLNSDGSCV--DGRCGGEG----SDGCFIMAYSLTLDESTSNSAEASA 765
            ++ W KPP  +IK+N+DGS +  +G+ G  G     +G  IMA+S  L E ++N AE  A
Sbjct: 33   KVAWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEA 92

Query: 766  LLYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEI-KYFSNRHDIRTRH 942
             L+GL W     F  I+ E DS ++   IS +   PW +++ +E + +      + R  H
Sbjct: 93   ALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRCSH 152

Query: 943  CYREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTLT 1122
             +REA  VAD L+  S+N+    +Y     LP++       D   +PSFR +K K   + 
Sbjct: 153  IFREANWVADALSKHSHNNTAPQVYVHSNQLPKEAHAYYQMDLMDMPSFRRKKTK---MI 209

Query: 1123 YEPP 1134
            ++PP
Sbjct: 210  FDPP 213


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 79.7 bits (195), Expect(3) = 3e-18
 Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCVDGRCGGEGSD------GCFIMAYSLTLDESTSNSAEASAL 768
            ++W KPP  ++KLN+DGS +         D      G  I+AYS  L   T+N AE  A 
Sbjct: 1068 VQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAA 1127

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHD-IRTRHC 945
            ++G+ WCI+  +N +I E DS +L +        PW IS  ++++   + + D  +  H 
Sbjct: 1128 IFGIAWCIHMKYNQVILEVDSQLLVDWFKNNKLIPWNISSQMQQLHQLATQLDHFKCIHT 1187

Query: 946  YREAYRVADKLATLSN 993
            +REA  VAD L+  S+
Sbjct: 1188 FREANFVADVLSKHSH 1203



 Score = 35.4 bits (80), Expect(3) = 3e-18
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +3

Query: 381  PMANYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKI 548
            P  N  HKL+    P  I W LW++R   ++  ++  + R K ++  +  +++ + F  I
Sbjct: 984  PHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFPYI 1043

Query: 549  TIEDNWEDVCNLYE 590
            +    W   CN+ E
Sbjct: 1044 SWPLRWNKFCNVIE 1057



 Score = 24.6 bits (52), Expect(3) = 3e-18
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 182  SNGYIDSKCSYCTDISMIQGPENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLRELL 355
            S G   S C  C       G +  +H   +G +A+ V K+F   LGI    + LR ++
Sbjct: 924  SFGIEPSDCHCCHS----PGIDTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMI 977


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 308

 Score = 90.1 bits (222), Expect(3) = 3e-18
 Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 7/181 (3%)
 Frame = +1

Query: 613  WLKPPPLFIKLNSDGSCVD--GRCGGEG----SDGCFIMAYSLTLDESTSNSAEASALLY 774
            W +PP  +IK+N+DGS +   G+ G  G     +G  ++A++  L E ++N AE +A L+
Sbjct: 131  WNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAETAAALF 190

Query: 775  GLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKY-FSNRHDIRTRHCYR 951
            GL W +   +  I+ E DS ++   IS +    W ++  +E I++      + +  H +R
Sbjct: 191  GLSWALELGYRNILIELDSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQNFKCTHIFR 250

Query: 952  EAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTLTYEP 1131
            EA  VAD L+  S+N     +Y +   LP++ +     D   +PSFR +K K     ++P
Sbjct: 251  EANWVADSLSKHSHNTTAPQVYFSSTQLPKEAQAYYQMDLLNMPSFRRKKTKK---IFDP 307

Query: 1132 P 1134
            P
Sbjct: 308  P 308



 Score = 26.6 bits (57), Expect(3) = 3e-18
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +3

Query: 390 NYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKITIE 557
           N  H+L+    P  I W LW++R   ++  +   + R K  +  +  +++K  F  I   
Sbjct: 48  NEGHQLLLQATPTFICWNLWKNRCACKYGAKATNISRVKYAVYKDTFKMLKIAFPHIKWP 107

Query: 558 DNW 566
            +W
Sbjct: 108 ASW 110



 Score = 23.1 bits (48), Expect(3) = 3e-18
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 245 ENTDHLFYNGRYAQ*VSKFFIGRLGIEYKNINLR 346
           ++ DH F +G +A  V  FF    G++  + +L+
Sbjct: 2   DSIDHTFNSGPFAARVWNFFAASAGLQADHSSLQ 35


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score = 83.2 bits (204), Expect(2) = 9e-18
 Identities = 60/174 (34%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCV--DGRCGGEGS----DGCFIMAYSLTLDESTSNSAEASAL 768
            + W KP     KLN+DGS +   G+ GG G      G    A+S+     T+N AE  A 
Sbjct: 776  VSWRKPQFGIYKLNTDGSALPESGKIGGGGILRDYTGKLHYAFSIPFGLGTNNIAEMEAA 835

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNRHD-IRTRHC 945
             YGL WC  + +  I+ E DS ILQ  IS     PWR   T+E I+    + D    +H 
Sbjct: 836  RYGLDWCEQHGYKSILLEVDSEILQKWISNTIAIPWRYQQTIEHIQDIGRKMDHFECQHV 895

Query: 946  YREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
            YRE    AD L+  S+  + L  + T   L   IRG    D+    +FR +K +
Sbjct: 896  YREVNGTADLLSKWSHKLDILQHFYTSQQLIGSIRGSYILDKLGTQNFRRRKTR 949



 Score = 35.0 bits (79), Expect(2) = 9e-18
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = +3

Query: 381 PMANYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKI 548
           P +N ++KL+    P  I W LW++    ++  +   +QR +  I  ++ Q IK  F  I
Sbjct: 692 PSSNQVYKLLISILPNFICWHLWKNMCAVKYGNKISSIQRVQYGIFKDVMQTIKIVFPNI 751

Query: 549 TIEDNWEDVCNLYE 590
             + +W  + NL E
Sbjct: 752 PWQHSWYRLINLVE 765


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 601

 Score = 84.3 bits (207), Expect(2) = 9e-18
 Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
 Frame = +1

Query: 607  MKWLKPPPLFIKLNSDGSCVDGRCGGEGS------DGCFIMAYSLTLDESTSNSAEASAL 768
            ++W+KP     KLN+DGSC+      EG        G  I A++      T+N A+  A 
Sbjct: 422  VRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSIIFAFASPFAFGTNNIAKLKAA 481

Query: 769  LYGLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKYFSNR-HDIRTRHC 945
            LYGL+WC  + +  I+ E DS +L   IS     PWR    V+ I   + + H  + +H 
Sbjct: 482  LYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQIPWRCQQYVQHIHEITKKLHHFQCQHI 541

Query: 946  YREAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKK 1107
            YRE    AD LA  S+N E    + T       IRG    ++  + +FR +K K
Sbjct: 542  YREENSTADLLAKWSHNIEIPQDFYTTRQFKGTIRGSYILEKMGIQNFRRRKVK 595



 Score = 33.9 bits (76), Expect(2) = 9e-18
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +3

Query: 390 NYMHKLM----PPIIIWELWRSRRNSRFDMEKLLLQRSKDMITFNITQIIKSHFKKITIE 557
           N +HKL+    P II W LW +R   ++  ++  + R +  I  +  QIIK  +  I  +
Sbjct: 341 NEVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSIYRVQYGIFKDTMQIIKLEYSNIPWQ 400

Query: 558 DNWEDVCNLYE 590
            +W  + N  +
Sbjct: 401 YSWGHLINFID 411


>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 181

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
 Frame = +1

Query: 613  WLKPPPLFIKLNSDGSCV--DGRCGGEG----SDGCFIMAYSLTLDESTSNSAEASALLY 774
            W KPP  +IK+N+DGS +  +G+ G  G     +G  +MA+S  L E ++N AE  A L+
Sbjct: 4    WFKPPDQWIKINTDGSAIINEGKIGAGGIIRDKEGKLLMAFSTPLGEGSNNQAEIEATLF 63

Query: 775  GLKWCINNDFNLIIRETDSLILQNSIS*EWDTPWRISDTVEEIKY-FSNRHDIRTRHCYR 951
            G+ W +   F  I+ E DS ++   IS +    W  ++ +E + +      + +  H +R
Sbjct: 64   GMTWALELGFKNILLELDSQLVVQWISNKIAPQWSFTNQLERLHHIIMQTQNFKCSHIFR 123

Query: 952  EAYRVADKLATLSNNHEELCIYNTFGGLPRQIRGMLNTDR*QLPSFRVQKKKASTLTYEP 1131
            EA  VAD L+  S+N     +Y     LP++ +     D   +PSFR +K K   + ++P
Sbjct: 124  EANWVADALSKHSHNTTAPQVYFNSNQLPKEAQAYYQMDLLNMPSFRRKKTK---MIFDP 180

Query: 1132 P 1134
            P
Sbjct: 181  P 181