BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00022018
         (1245 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   327   8e-87
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   321   5e-85
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   312   2e-82
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   304   6e-80
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           304   6e-80
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   303   7e-80
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       298   4e-78
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   290   9e-76
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   288   2e-75
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   279   2e-72
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             278   4e-72
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   277   6e-72
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               276   1e-71
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   275   2e-71
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                270   9e-70
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               268   3e-69
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   268   5e-69
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   267   8e-69
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   266   1e-68
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   261   3e-67

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  327 bits (837), Expect = 8e-87
 Identities = 153/353 (43%), Positives = 222/353 (62%), Gaps = 5/353 (1%)
 Frame = +1

Query: 4    FVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPPT 183
            F+ GR I +NI LA E++++Y RK VSPR MLK+DL KA+DSV+W FL+ V+  + FP  
Sbjct: 358  FIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVMEGLGFPDL 417

Query: 184  FASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTSD 363
            F   +M+CV T +++I +NG     F   KGLRQGDP+SP LF I +EYLSRLLK    D
Sbjct: 418  FTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKED 477

Query: 364  PDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCLY 543
              F +HPK   L +TH           RGD++SI  L KC  +F + SGL AN  KS +Y
Sbjct: 478  KSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIY 537

Query: 544  TAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASKT 723
              G+  E  + +     ++I  LPFKYLG+PL+++KL  + + P ++K+ + I++W +K 
Sbjct: 538  CGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKK 597

Query: 724  LSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLWH-----SRQPAVAWKE 888
            LSYAGRA+L+K+VL GV+  W  +  IPA I + I  +CR++LW      +++  +AW +
Sbjct: 598  LSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDK 657

Query: 889  CCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIW 1047
             C PK EGGLG  +++ WN + + K  WD+  K+D LW+KWI+  Y+     W
Sbjct: 658  VCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIKGQREW 710


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  321 bits (822), Expect = 5e-85
 Identities = 162/418 (38%), Positives = 239/418 (57%), Gaps = 5/418 (1%)
 Frame = +1

Query: 4    FVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPPT 183
            F+ GR I +NI LA E++R Y RK +SPR ++KVD+RKA+DSV+WSFL+ +L    FP  
Sbjct: 550  FIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSR 609

Query: 184  FASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTSD 363
            F   IMECV+T S+S+ +NG     F+  KGLRQGDP+SP LF +C+EYLSR L+     
Sbjct: 610  FVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGS 669

Query: 364  PDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCLY 543
            PDFN HPKC  L ITH           R D SS+  +    Q F   SGL A+  KS +Y
Sbjct: 670  PDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIY 729

Query: 544  TAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASKT 723
              G+  E    + D     +G LPF+YLG+PL ++KL     +P V+ I +    W +K 
Sbjct: 730  FCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKL 789

Query: 724  LSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWKE 888
            LSYAGR +LIKS+L  ++ +W  I P+   + + + ++CR FLW      +++  VAW  
Sbjct: 790  LSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWAT 849

Query: 889  CCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKRD 1068
               PK+ GG    +++ WN A ++K LW I  K+D LWV+WI++ Y+   DI +      
Sbjct: 850  IQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQ 909

Query: 1069 DSPLIKRLLQVRDQIVLRSNTQNTPEAILAGCNGGTDGGSRKSYDLFRPCKDKVRWCR 1242
             + +++++++ RD +   SN  +  E  +     G     +K+Y       ++VRW R
Sbjct: 910  TTWILRKIVKARDHL---SNIGDWDEICI-----GDKFSMKKAYKKISENGERVRWRR 959


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  312 bits (800), Expect = 2e-82
 Identities = 163/418 (38%), Positives = 237/418 (56%), Gaps = 5/418 (1%)
 Frame = +1

Query: 4    FVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPPT 183
            F+  R I +NI LA E++R YNR+ VSPR ++KVD+RKA+DSV+W FL+++L  + FP  
Sbjct: 553  FIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSM 612

Query: 184  FASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTSD 363
            F   IM CV T S+SI +NG     F   KGLRQGDPLSP LF + +EYLSR +     D
Sbjct: 613  FIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKD 672

Query: 364  PDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCLY 543
            P+FN HPKC  + +TH           R D SSI  +M     F + SGL A+  KSC+Y
Sbjct: 673  PEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIY 732

Query: 544  TAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASKT 723
              G+  EE E + D     IG+LPF+YLG+PLA++KL     +P +DKI +    W +  
Sbjct: 733  FGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHL 792

Query: 724  LSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWKE 888
            LSYAGR +L+K++L  ++ +W  I P+P  + + +   CR FLW      S +  VAW  
Sbjct: 793  LSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDF 852

Query: 889  CCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKRD 1068
               PK+ GGL   ++  WN A ++K LW I  K+D LWV+W+N  Y+   +I +     +
Sbjct: 853  LQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSN 912

Query: 1069 DSPLIKRLLQVRDQIVLRSNTQNTPEAILAGCNGGTDGGSRKSYDLFRPCKDKVRWCR 1242
             S +++++ + R+ +          EA+    N       +K+Y L +   + V W R
Sbjct: 913  TSWILRKIFESRELLTRTGGW----EAVSNHMNFSI----KKTYKLLQEDYENVVWKR 962


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  304 bits (778), Expect = 6e-80
 Identities = 153/373 (41%), Positives = 216/373 (57%), Gaps = 5/373 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AF+ GR + EN+ LA EM+  YNR  +SPR MLKVDL+KAFDSV W F+ A L ++  P 
Sbjct: 418  AFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPE 477

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             + + I +C+TT SF+IS+NG+  G F+  KGLRQGDPLSP LFV+ +E  S+LL  R  
Sbjct: 478  RYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYD 537

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
                ++HPK G L I+H            G  SS+  + + L DF + SGL  N  KS L
Sbjct: 538  SGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQL 597

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            + AG+   E         F  G  P +YLG+PL   KL++  Y P ++K+++ + +W SK
Sbjct: 598  FQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSK 656

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLWHS-----RQPAVAWK 885
             LS+AGR +LI SV+ G+  FW+S   +P    ++I  +C  FLW       +   V+W 
Sbjct: 657  ALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWV 716

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
            +CCLPK+EGGLGFR    WN  LL++ +W +  +  +LW +W  +  L H   W   A +
Sbjct: 717  DCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQ 776

Query: 1066 DDSPLIKRLLQVR 1104
             D    K LL +R
Sbjct: 777  TDPWTWKMLLNLR 789


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  304 bits (778), Expect = 6e-80
 Identities = 153/373 (41%), Positives = 216/373 (57%), Gaps = 5/373 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AF+ GR + EN+ LA EM+  YNR  +SPR MLKVDL+KAFDSV W F+ A L ++  P 
Sbjct: 418  AFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPE 477

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             + + I +C+TT SF+IS+NG+  G F+  KGLRQGDPLSP LFV+ +E  S+LL  R  
Sbjct: 478  RYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYD 537

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
                ++HPK G L I+H            G  SS+  + + L DF + SGL  N  KS L
Sbjct: 538  SGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQL 597

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            + AG+   E         F  G  P +YLG+PL   KL++  Y P ++K+++ + +W SK
Sbjct: 598  FQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSK 656

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLWHS-----RQPAVAWK 885
             LS+AGR +LI SV+ G+  FW+S   +P    ++I  +C  FLW       +   V+W 
Sbjct: 657  ALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWV 716

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
            +CCLPK+EGGLGFR    WN  LL++ +W +  +  +LW +W  +  L H   W   A +
Sbjct: 717  DCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQ 776

Query: 1066 DDSPLIKRLLQVR 1104
             D    K LL +R
Sbjct: 777  TDPWTWKMLLNLR 789


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  303 bits (777), Expect = 7e-80
 Identities = 156/373 (41%), Positives = 223/373 (59%), Gaps = 5/373 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV+GR +TEN+ LA E+++ + +  +S R +LKVDLRKAFDSV W F+   L + N PP
Sbjct: 557  AFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPP 616

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F + I +C+T++SFSI+++GS+ G+FKG KGLRQGDPLSP+LFVI +E LSRLL+ + S
Sbjct: 617  RFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFS 676

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
            D    +HPK   + I+             G  SS+  +   L+ F   SGL  N  KS +
Sbjct: 677  DGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAV 736

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            YTAG+   + E+      F  G  PF+YLG+PL   KL+   Y   +DKIA+  + WA+K
Sbjct: 737  YTAGLEDTDKEDTLAF-GFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATK 795

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
            TLS+AGR +LI SV+     FWLS   +P    + I ++C  FLW           V+W+
Sbjct: 796  TLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQ 855

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
              CLPK EGGLG R+   WN  L ++ +W +  ++D+LWV W +   L H + W+ +A  
Sbjct: 856  NSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAAS 915

Query: 1066 DDSPLIKRLLQVR 1104
              S + K +L +R
Sbjct: 916  HHSWIWKAILGLR 928


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  298 bits (762), Expect = 4e-78
 Identities = 154/373 (41%), Positives = 217/373 (58%), Gaps = 5/373 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AF+ GR + EN+ LA +++  YN   +SPR MLKVDL+KAFDSV W F+ A L ++  P 
Sbjct: 558  AFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPE 617

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F + I +C++T +F++SING   G FK  KGLRQGDPLSP LFV+ +E  S LL  R  
Sbjct: 618  KFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYE 677

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
                ++HPK  +L I+H            G   S+  + + L DF   SGL  N  KS L
Sbjct: 678  SGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHL 737

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG+++ E  N      F IG LP +YLG+PL   KL++  YEP ++KI +   +W +K
Sbjct: 738  YLAGLNQLE-SNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNK 796

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LS+AGR +LI SV+ G   FW+S   +P    +RI  +C  FLW      ++   V+W 
Sbjct: 797  CLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWA 856

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
              CLPK+EGGLG R +  WN  L ++ +W +   KD+LW  W +  +L+ G  W+ +  +
Sbjct: 857  ALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQ 916

Query: 1066 DDSPLIKRLLQVR 1104
             DS   KRLL +R
Sbjct: 917  SDSWTWKRLLSLR 929


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  290 bits (742), Expect = 9e-76
 Identities = 137/373 (36%), Positives = 220/373 (58%), Gaps = 5/373 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV G+ + +++ LA E+LR Y RK  +P+ ML++D++KA+D+V W  L+ +L  + FP 
Sbjct: 377  AFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILRELGFPD 436

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   IM  V + ++  +ING      +  +G+RQGDP+SP LF++ +EYL+R+L     
Sbjct: 437  QFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQLDK 496

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
             P+FN+H KC  + IT+           RGD+ S+ I++     F    GL+ N  K  +
Sbjct: 497  IPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNI 556

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y   +     E +  ++ F  G +PF+YLGIPL+++KL + HY+  +DKI   I+ W++ 
Sbjct: 557  YCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAG 616

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LSYAGR +LI+SV+     FW+  LP+P  +  RI  ICR+FLW      SR+  +AW+
Sbjct: 617  LLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWE 676

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
            + C PK  GGL   ++  WN   ++K LW++  K D LW+KW++  Y+    IWS   K+
Sbjct: 677  KVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKK 736

Query: 1066 DDSPLIKRLLQVR 1104
              S ++  ++++R
Sbjct: 737  SHSWIMSSMMKLR 749


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  288 bits (738), Expect = 2e-75
 Identities = 154/391 (39%), Positives = 224/391 (57%), Gaps = 8/391 (2%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AF+ GR   EN+ LA E++  YN+K ++P +MLKVDLRKAFDSV W F+ + L ++N P 
Sbjct: 455  AFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPE 514

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   I+EC++T+SFS+ +NG   GHF   KGLRQGDP+SP LFV+ +E  S LL+ R +
Sbjct: 515  KFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYT 574

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
                 +HPK   L I+H            G  SS+  +++ L+DF   SGL  N  K+ L
Sbjct: 575  SGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQL 634

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG+S+ E ++M     F +G+LP +YLG+PL + KL +  Y P ++KI +  ++W  +
Sbjct: 635  YHAGLSQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVR 693

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLWHSR-----QPAVAWK 885
             LS+AGR +L+ SV+ G+  FW+S   +P    ++I  +C  FLW SR        VAW 
Sbjct: 694  LLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWS 753

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHG-DIWSWQAK 1062
            + CLPK EGG+G R     N  L ++ +W +     +LWV W     L      W+   K
Sbjct: 754  QVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEK 813

Query: 1063 RDDSPLIKRLLQVR--DQIVLRSNTQNTPEA 1149
              DS   K LL++R   +  +R N  N  +A
Sbjct: 814  PHDSWNWKCLLRLRVVAERFIRCNVGNGRDA 844


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score =  279 bits (713), Expect = 2e-72
 Identities = 140/374 (37%), Positives = 214/374 (57%), Gaps = 5/374 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AF++ R + EN+ LA E+++ Y++  VS R  +K+D+ KAFDSV WSFL+ VL +++FP 
Sbjct: 82   AFIKDRLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQ 141

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   IM CVTT+SFS+ +N  + G+F   +GLRQG  L+P LFVI ++ LS+ L     
Sbjct: 142  EFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAG 201

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
               F +HPKC +LG+TH            G + S+  +++    F + SGL  +  K+ +
Sbjct: 202  LRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTI 261

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AGIS+   +  +D   F++G LP +YL +PL  ++     Y P +++I   I  W ++
Sbjct: 262  YFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTAR 321

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LSYAGR  L+ SVL  +  FWLS   +P      I ++C  FLW      + +  +AW+
Sbjct: 322  FLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWE 381

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
              C PK EGGLG + I+  N    +K +W I  + D+LWV+WI    L     WS+++  
Sbjct: 382  TVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSAS 441

Query: 1066 DDSPLIKRLLQVRD 1107
              S + K+LL+ RD
Sbjct: 442  QGSWMWKKLLKYRD 455


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  278 bits (710), Expect = 4e-72
 Identities = 138/357 (38%), Positives = 204/357 (57%), Gaps = 5/357 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV+ R + EN+ LA E+++ Y+++ VS R  +K+D+ KAF+SV WSF++ +L SM+FP 
Sbjct: 91   AFVKDRLLIENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPM 150

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   IM C++T+SFS+ +NG + G F+  +GLRQG  LSP LFV+ ++ LS+LL    S
Sbjct: 151  EFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAAS 210

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
               F +H +C  L +TH            G V SI  +++    F + SGL  +  KS +
Sbjct: 211  AKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTI 270

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG++ +    +Q+   F +G LP +YLG+PL  ++L    Y P ++ I   I  W ++
Sbjct: 271  YLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTR 330

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LSYAGR  LI SVL  +  FWL+   +P      I +IC  FLW     + R+  V W 
Sbjct: 331  YLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWG 390

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQ 1056
            + C PK EGGLG R ++  N    +K +W I    ++LWV+WI    L H   WS Q
Sbjct: 391  DVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQ 447


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  277 bits (709), Expect = 6e-72
 Identities = 140/375 (37%), Positives = 212/375 (56%), Gaps = 6/375 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV+ R + EN+ LA E+++ Y++  +S R  +K+D+ KAFDSV W FL  V T + FP 
Sbjct: 564  AFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPR 623

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   I  C+TT+SFS+ +NG + G+F+  +GLRQG  LSP LFVIC++ LS++L    +
Sbjct: 624  EFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAA 683

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
               F +HPKC ++G+TH            G + SI  ++K   +F + SGL  +  KS +
Sbjct: 684  ARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTV 743

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG+S      + D   FS G LP +YLG+PL  ++L      P ++++   I +W S+
Sbjct: 744  YLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSR 803

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LSYAGR  LI SVL  +  FWL+   +P      + ++C  FLW     +S +  ++W 
Sbjct: 804  FLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWH 863

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWS-WQAK 1062
              C PK EGGLG R ++  N    +K +W I    ++LWVKW++   L +   W   Q  
Sbjct: 864  MVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTV 923

Query: 1063 RDDSPLIKRLLQVRD 1107
               S + K+LL+ R+
Sbjct: 924  SQGSWIWKKLLKYRE 938


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  276 bits (706), Expect = 1e-71
 Identities = 142/375 (37%), Positives = 213/375 (56%), Gaps = 6/375 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV+ R + EN+ LA E+++ Y++  +S R  +K+D+ KAFDSV WSFL   L +MNF P
Sbjct: 211  AFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSP 270

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
            TF   I  C+TT+SFS+ +NG + G+F+  +GLRQG  LSP LFVIC++ LS++L     
Sbjct: 271  TFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAG 330

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
               F  HPKC  LG+TH            G   SI  +++   +F + SGL  +  KS L
Sbjct: 331  VRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTL 390

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG+S    + +     F +G LP +YLG+PL  ++L    Y P +++I   I+ W  +
Sbjct: 391  YMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFR 450

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
              S+AGR  LIKSVL  +  FWL+   +P      I ++C +FLW      S +  ++W 
Sbjct: 451  FFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWD 510

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSW-QAK 1062
              C PK EGGLG R+++  N    +K +W I    ++LW KW+    +    IWS  Q+ 
Sbjct: 511  IVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQST 570

Query: 1063 RDDSPLIKRLLQVRD 1107
               S + +++L++RD
Sbjct: 571  SMGSWIWRKILKIRD 585


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  275 bits (704), Expect = 2e-71
 Identities = 139/355 (39%), Positives = 200/355 (56%), Gaps = 5/355 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV+ R + EN+ LA E+++ Y++  +S R  +K+D+ KAFDS+ WSFL  VL +MNFP 
Sbjct: 285  AFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPG 344

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   I  C++T+SFSI +NG + G+F+  +GLRQG  LSP LFVI ++ LSR+L     
Sbjct: 345  EFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAG 404

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
              +F +HP+C +LG+TH            G + S+  ++K L  F    GL     K+ L
Sbjct: 405  AREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTL 464

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG+S    + M    SF +G LP +YLG+PL  ++L    Y P +D+I   I  W S+
Sbjct: 465  YLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSR 524

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LS+AGR  LI SVL  +  FW++   +P      I RI    LW     + ++  V+W 
Sbjct: 525  YLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWD 584

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWS 1050
            E C PK EGGLG + +R  N    +K +W +   +D+LWVKW     L     WS
Sbjct: 585  EICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWS 639


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  270 bits (690), Expect = 9e-70
 Identities = 135/375 (36%), Positives = 209/375 (55%), Gaps = 6/375 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV  R + EN+ LA E+++ Y++  +SPR  +K+D+ KAFDSV W FL   L ++NFP 
Sbjct: 137  AFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPE 196

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   I  C++T++FS+ +NG + G F   +GLRQG  LSP LFVIC+  LS ++ +   
Sbjct: 197  NFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAV 256

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
              +  +HPKC  L +TH            G   S+  ++   ++F   SGL+ +  KS L
Sbjct: 257  HRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTL 316

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            Y AG+S     N+     F+ G LP +YLG+PL  +++    Y P +DK+ S IS+W ++
Sbjct: 317  YLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTAR 376

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
            +LSYAGR  LI SV+  +  FW+S   +PA   + I ++C  FLW     + ++  + W 
Sbjct: 377  SLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWT 436

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
              C  K EGGLG + +   N    +K +W +  ++ +LWV W+    +  G  WS   + 
Sbjct: 437  SLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRS 496

Query: 1066 D-DSPLIKRLLQVRD 1107
               S + K+LL+ RD
Sbjct: 497  SLGSWMWKKLLKYRD 511


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  268 bits (686), Expect = 3e-69
 Identities = 131/354 (37%), Positives = 202/354 (57%), Gaps = 5/354 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            +FV+ R + EN+ LA ++++ Y++  +S R  +K+D+ KA DSV WSFL   LT+M+FP 
Sbjct: 117  SFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPE 176

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   I  C+TT SFS+ +NG + G F+  +GLRQG  LSP LFVIC++ LS+LL     
Sbjct: 177  MFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVG 236

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
                 +HP C  +G+TH            G   SI  +++    F + SGL  +  KS +
Sbjct: 237  IGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTI 296

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            ++AG+S      +     F +G LP +YLG+PL  ++L  V Y P +++I   I +W+S+
Sbjct: 297  FSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSR 356

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LS+AGR  LI S++     FWLS   +P    + I ++C +FLW     +S++  ++W 
Sbjct: 357  FLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWN 416

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIW 1047
            + C PK+EGGLG R ++  N    +K +W I    D+LWVKW+ +  L     W
Sbjct: 417  QVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFW 470


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  268 bits (684), Expect = 5e-69
 Identities = 127/350 (36%), Positives = 205/350 (58%), Gaps = 5/350 (1%)
 Frame = +1

Query: 79   VSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPPTFASLIMECVTTSSFSISINGSIHGH 258
            +S  A+L V+  + +D VDW  L+ VLT    P  F   +M+ +TT ++  +ING +   
Sbjct: 66   ISDHALLCVE--ETYDMVDWGALEGVLTEFGLPKKFIGWVMKVITTVNYRFNINGELSNV 123

Query: 259  FKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTSDPDFNHHPKCGSLGITHXXXXXXXXX 438
             +   G+ QGDP+SP LFV+ +EY +R++     +P FNHH +C  LGITH         
Sbjct: 124  LETKIGIWQGDPISPLLFVLMMEYFNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFL 183

Query: 439  XXRGDVSSIGILMKCLQDFGECSGLNANALKSCLYTAGISREELENMQDLTSFSIGALPF 618
              RGD  SI +++K    F + +GL  N  K  ++  G++ + ++ +  +T F  G LP 
Sbjct: 184  LCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPV 243

Query: 619  KYLGIPLAAEKLKVVHYEPFVDKIASYISAWASKTLSYAGRAELIKSVLQGVECFWLSIL 798
            +YLG+PL+ +KL V HY P V+KI   I  W+SK LS AGR +L++S++  +  +W+S+ 
Sbjct: 244  RYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVF 303

Query: 799  PIPATICERIIRICRNFLWH-----SRQPAVAWKECCLPKTEGGLGFRDIRAWNSALLVK 963
            P+P  + ++I  ICR+F+W       R+  VAWK+ C P   GGL   ++  WN   ++K
Sbjct: 304  PMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLK 363

Query: 964  CLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKRDDSPLIKRLLQVRDQI 1113
            CLW+I  K+D LWVKWI+  +L   ++ S   K + + ++K +++ R Q+
Sbjct: 364  CLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRPQV 413


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  267 bits (682), Expect = 8e-69
 Identities = 135/374 (36%), Positives = 207/374 (55%), Gaps = 6/374 (1%)
 Frame = +1

Query: 4    FVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPPT 183
            F+ GR I +NI LAQE++  Y++    PR    VD+ KA D+V+W F+ A L + N P T
Sbjct: 386  FIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPST 445

Query: 184  FASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS- 360
                I  C++++ FS+ +NG + G F   +GLRQGDPLSP LFVI +E LS  ++ R + 
Sbjct: 446  LIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINC 505

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
             P F +H +C  L ++H            GD +S+  L     +F   S L AN  +S +
Sbjct: 506  SPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKI 565

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            + AG+     +++  +T+FS+G  P +YLGIPL   KL++    P +D+I + I +W +K
Sbjct: 566  FLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENK 625

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLWHSR-----QPAVAWK 885
             LS+AGR +LI+SVL  ++ +W S L +P  + + I +  R FLW           VAW 
Sbjct: 626  VLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWS 685

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
            E CLPK EGGLG +D+  WN AL++  +W++       W  W+    L     W+     
Sbjct: 686  EICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPS 745

Query: 1066 DDSPLIKRLLQVRD 1107
              S   ++LL++R+
Sbjct: 746  ICSWNWRKLLKIRE 759


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  266 bits (680), Expect = 1e-68
 Identities = 136/377 (36%), Positives = 213/377 (56%), Gaps = 8/377 (2%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AFV+ R + EN+ LA E+++ Y+++ V+PR  +K+D+ KAFDSV W FL   L ++NFP 
Sbjct: 861  AFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPE 920

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
            TF   I  C++T++FS+ +NG + G F   +GLRQG  LSP LFVIC+  LS ++     
Sbjct: 921  TFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAV 980

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
              +  +HPKC  +G+TH            G   SI  ++   ++F   SGL  +  KS +
Sbjct: 981  HRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTI 1040

Query: 541  YTAGISREELENMQDLTSFSI--GALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWA 714
            Y AG+S    + +Q L+SF    G LP +YLG+PL  +++    Y P ++ + + IS+W 
Sbjct: 1041 YLAGVSAS--DRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWT 1098

Query: 715  SKTLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVA 879
            +++LSYAGR  L+ SV+  +  FW+S   +PA     I ++C  FLW     + ++  +A
Sbjct: 1099 ARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIA 1158

Query: 880  WKECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQA 1059
            W   C PK EGGLG + +   N    +K +W +   + +LWV WI    +  G  WS   
Sbjct: 1159 WSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANE 1218

Query: 1060 KRD-DSPLIKRLLQVRD 1107
            +    S + K+LL+ R+
Sbjct: 1219 RSSLGSWMWKKLLKYRE 1235


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  261 bits (668), Expect = 3e-67
 Identities = 134/376 (35%), Positives = 214/376 (56%), Gaps = 6/376 (1%)
 Frame = +1

Query: 1    AFVEGRCITENIHLAQEMLRSYNRKRVSPRAMLKVDLRKAFDSVDWSFLKAVLTSMNFPP 180
            AF++ R + EN+ LA E+++ Y+++ +S R+ LK+D+ KAFD V W FL  VL +++ P 
Sbjct: 711  AFIKDRLMMENLLLASELVKDYHKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPE 770

Query: 181  TFASLIMECVTTSSFSISINGSIHGHFKGGKGLRQGDPLSPTLFVICLEYLSRLLKMRTS 360
             F   I  C+ T+SFS+ +NG + G F+  +GLRQG  LSP L+VIC+  LS +L     
Sbjct: 771  MFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAV 830

Query: 361  DPDFNHHPKCGSLGITHXXXXXXXXXXXRGDVSSIGILMKCLQDFGECSGLNANALKSCL 540
            +   ++HP+C ++ +TH            G   SI   +   + F   S L  +  KS +
Sbjct: 831  EKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTI 890

Query: 541  YTAGISREELENMQDLTSFSIGALPFKYLGIPLAAEKLKVVHYEPFVDKIASYISAWASK 720
            + AGIS     ++     F +G LP KYLG+PL  +++    Y P V+KI + I++W ++
Sbjct: 891  FMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNR 950

Query: 721  TLSYAGRAELIKSVLQGVECFWLSILPIPATICERIIRICRNFLW-----HSRQPAVAWK 885
             LS+AGR +LIKSVL  +  FWLS+  +P    + I ++   FLW     ++++  +AW 
Sbjct: 951  FLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWS 1010

Query: 886  ECCLPKTEGGLGFRDIRAWNSALLVKCLWDIHRKKDTLWVKWINNKYLAHGDIWSWQAKR 1065
            E C  K EGGLG + ++  N   L+K +W I   +D+LWVKW+N   +     WS +   
Sbjct: 1011 EVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENT 1070

Query: 1066 D-DSPLIKRLLQVRDQ 1110
               S L +++L+ RD+
Sbjct: 1071 GLGSWLWRKILKQRDK 1086