BLASTX nr result
ID: Atropa21_contig00021846
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00021846 (743 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 78 2e-24 gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao] 78 2e-24 gb|ABC94893.1| polyprotein [Oryza australiensis] 74 6e-23 gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 112 1e-22 gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] 74 2e-22 gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 111 2e-22 emb|CAD39356.2| OSJNBa0059H15.7 [Oryza sativa Japonica Group] 74 3e-22 gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 72 8e-22 gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 72 8e-22 gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group... 70 1e-21 gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 70 1e-21 gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Jap... 68 3e-21 ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586... 86 5e-21 gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom... 107 5e-21 gb|EMJ25340.1| hypothetical protein PRUPE_ppa016115mg [Prunus pe... 67 2e-20 gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 104 3e-20 gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 104 4e-20 ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605... 103 5e-20 ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer... 99 1e-18 gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 99 1e-18 >gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] Length = 1447 Score = 78.2 bits (191), Expect(2) = 2e-24 Identities = 63/180 (35%), Positives = 85/180 (47%), Gaps = 11/180 (6%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 L+IR DIPKT FRT Y +Y+ M FGL N PA F++LMNRV K YL Sbjct: 644 LRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDIL 703 Query: 403 IYSCNREENE*YLRIVL*FYKRXXXXXXXXXXLA*FSGI--LGSHCVQ*RLSQEG*SNLE 230 IYS +REE+E +L+IVL + + LG H V + +E Sbjct: 704 IYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLG-HVVSKEGIRVDTKKIE 762 Query: 229 LVQTY------YAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQK 68 V+ + L Y FV+ FS I + L++LT K +F W + CE F+K Sbjct: 763 AVEKWPRPTSVSEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEK 822 Score = 61.2 bits (147), Expect(2) = 2e-24 Identities = 32/59 (54%), Positives = 40/59 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL 565 FVKKKDGS+R+ Q N V +KNKY IDDLFD+LQG SKI +RS Y++ R+ Sbjct: 588 FVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRI 646 Score = 75.5 bits (184), Expect = 2e-11 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 10/120 (8%) Frame = -3 Query: 333 YAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI*SWSKPTMPTEI*SFL-------Q 184 YAKFSKC FWL+SV FLGH+VS EG KK+E + W +PT +EI SF+ + Sbjct: 729 YAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVSEIRSFVGLAGYYRR 788 Query: 183 FVIVVLWRCXXXXXXXXXXXPRRVYNLDGLRSVRSAFKKLKIALTTEPIFVLPAGLRSYT 4 FV + R+ + + ++F+KLK LTT P+ LP G YT Sbjct: 789 FV-----KDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYT 843 >gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao] Length = 1052 Score = 78.2 bits (191), Expect(2) = 2e-24 Identities = 63/180 (35%), Positives = 85/180 (47%), Gaps = 11/180 (6%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 L+IR DIPKT FRT Y +Y+ M FGL N PA F++LMNRV K YL Sbjct: 602 LRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDIL 661 Query: 403 IYSCNREENE*YLRIVL*FYKRXXXXXXXXXXLA*FSGI--LGSHCVQ*RLSQEG*SNLE 230 IYS +REE+E +L+IVL + + LG H V + +E Sbjct: 662 IYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLG-HVVSKEGIRVDTKKIE 720 Query: 229 LVQTY------YAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQK 68 V+ + L Y FV+ FS I + L++LT K +F W + CE F+K Sbjct: 721 AVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEK 780 Score = 61.2 bits (147), Expect(2) = 2e-24 Identities = 32/59 (54%), Positives = 40/59 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL 565 FVKKKDGS+R+ Q N V +KNKY IDDLFD+LQG SKI +RS Y++ R+ Sbjct: 546 FVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRI 604 Score = 77.0 bits (188), Expect = 6e-12 Identities = 47/120 (39%), Positives = 62/120 (51%), Gaps = 10/120 (8%) Frame = -3 Query: 333 YAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI*SWSKPTMPTEI*SFL-------Q 184 YAKFSKC FWL+SV FLGH+VS EG KK+E + W +PT TEI SF+ + Sbjct: 687 YAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRR 746 Query: 183 FVIVVLWRCXXXXXXXXXXXPRRVYNLDGLRSVRSAFKKLKIALTTEPIFVLPAGLRSYT 4 FV + R+ + + ++F+KLK LTT P+ LP G YT Sbjct: 747 FV-----KDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYT 801 >gb|ABC94893.1| polyprotein [Oryza australiensis] Length = 1469 Score = 74.3 bits (181), Expect(2) = 6e-23 Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 15/189 (7%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 LKIRA DIPKT F T Y Y+ M FGL N PA F+NLMN+V +YL Sbjct: 639 LKIRAGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDKFVVVFIDDIL 698 Query: 403 IYSCNREENE*YLRIVL------*FYKRXXXXXXXXXXLA*FSGILGSHCVQ*RLSQEG* 242 IYS N EE+ +LR+VL Y + +A F G H V Sbjct: 699 IYSKNDEEHAEHLRLVLEKLREHRLYAKFSKCEFWLKEVA-FLG----HVVSAGGVAVDP 753 Query: 241 SNLELVQTYYAY*DL----EFLTVC--YCSFVEMFSAIASLLSQLT*KGVQFRWFEECEK 80 + +E V + A + FL + Y F+E FS +A ++QL K +F W E+C+K Sbjct: 754 AKVEAVMEWKAPKSVTEVRSFLGLAGYYRRFIEGFSTVARPMTQLLKKEKKFEWNEKCQK 813 Query: 79 CFQKAQDRI 53 F + ++++ Sbjct: 814 AFDQLKEKL 822 Score = 60.1 bits (144), Expect(2) = 6e-23 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR 574 FVKKKDGSMR+ N V +KNKY IDDLFD+L+G V SKI +RS Y++ Sbjct: 583 FVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAQVFSKIDLRSGYHQ 638 >gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum] Length = 1602 Score = 112 bits (281), Expect = 1e-22 Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 14/255 (5%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL- 565 FV+KKDGS+RI Q N V +KNKY IDDLFD+LQG T SKI +RS Y++ R+ Sbjct: 706 FVRKKDGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVR 765 Query: 564 ERWISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLYILVIG 385 ER I R ++ + ++ ++ + + P+ II++ ++I Sbjct: 766 ERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAF--MDLMNRVFRPYLDMFVIIFIDDILIY 823 Query: 384 KRMSNI*GLCSNSI------REFYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI* 232 R ++ +E YAKFSKC FWL SV FLGHIVS +G +K+E + Sbjct: 824 SRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQ 883 Query: 231 SWSKPTMPTEI*SFLQFVIVVLWRCXXXXXXXXXXXPRRVYNLDG----LRSVRSAFKKL 64 +W +PT PTEI SFL + +R ++ G + +F++L Sbjct: 884 NWPRPTSPTEIRSFLG--LAGYYRRFVEGFSSIASPLTKLTQKTGKFQWSEACEKSFQEL 941 Query: 63 KIALTTEPIFVLPAG 19 K L T P+ LP G Sbjct: 942 KKRLITAPVLTLPEG 956 >gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] Length = 1263 Score = 74.3 bits (181), Expect(2) = 2e-22 Identities = 63/180 (35%), Positives = 84/180 (46%), Gaps = 11/180 (6%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 L+IR DIPKT FRT Y +Y+ M FGL N PA F++LMNRV K YL Sbjct: 453 LRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFMVVFIDDIL 512 Query: 403 IYSCNREENE*YLRIVL*FYKRXXXXXXXXXXLA*FSGI--LGSHCVQ*RLSQEG*SNLE 230 IYS +R+E+E +L+IVL K + LG H V Q +E Sbjct: 513 IYSKSRKEHEQHLKIVLQILKEHQLYAKFSKCEFWLESVAFLG-HVVSKDGIQVDSKKIE 571 Query: 229 LVQTY------YAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQK 68 V+ + L Y FV+ FS I + L++LT K +F W + E F+K Sbjct: 572 AVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTCKDAKFEWSDAYENSFEK 631 Score = 58.2 bits (139), Expect(2) = 2e-22 Identities = 31/59 (52%), Positives = 39/59 (66%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL 565 FVKKKDGS+R+ Q N V +KNKY IDDLFD+LQ SKI +RS Y++ R+ Sbjct: 397 FVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQRAQCFSKIDLRSGYHQLRI 455 Score = 73.6 bits (179), Expect = 7e-11 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 7/118 (5%) Frame = -3 Query: 339 EFYAKFSKCNFWLDSVVFLGHIVSSEG*---AKKVEVI*SWSKPTMPTEI*SFLQFVIVV 169 + YAKFSKC FWL+SV FLGH+VS +G +KK+E + W +PT TEI SF+ + Sbjct: 536 QLYAKFSKCEFWLESVAFLGHVVSKDGIQVDSKKIEAVEKWPRPTSVTEIRSFVG--LAG 593 Query: 168 LWRCXXXXXXXXXXXPRRVYNLDGL----RSVRSAFKKLKIALTTEPIFVLPAGLRSY 7 +R ++ D + ++F+KLK LT P+ LP G R Y Sbjct: 594 YYRRFVKDFSKIVAPLTKLTCKDAKFEWSDAYENSFEKLKACLTIAPVLSLPQGTRGY 651 >gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1515 Score = 111 bits (278), Expect = 2e-22 Identities = 85/255 (33%), Positives = 126/255 (49%), Gaps = 14/255 (5%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL- 565 FV+KKDGS+R+ Q N V +KNKY IDDLFD+LQG T SKI +RS Y++ R+ Sbjct: 700 FVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVR 759 Query: 564 ERWISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLYILVIG 385 ER I R ++ + ++ ++ + + P+ II++ ++I Sbjct: 760 ERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAF--MDLMNRVFRPYLDMFVIIFIDDILIY 817 Query: 384 KRMSNI*GLCSNSI------REFYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI* 232 R ++ +E YAKFSKC FWL SV FLGHIVS +G +K+E + Sbjct: 818 SRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQ 877 Query: 231 SWSKPTMPTEI*SFLQFVIVVLWRCXXXXXXXXXXXPRRVYNLDG----LRSVRSAFKKL 64 +W +PT PTEI SFL + +R ++ G + +F++L Sbjct: 878 NWPRPTSPTEIRSFLG--LAGYYRRFVEGFSSIASPLTKLTQKTGKFQWSEACEKSFQEL 935 Query: 63 KIALTTEPIFVLPAG 19 K L T P+ LP G Sbjct: 936 KKRLITAPVLTLPEG 950 >emb|CAD39356.2| OSJNBa0059H15.7 [Oryza sativa Japonica Group] Length = 920 Score = 74.3 bits (181), Expect(2) = 3e-22 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 10/184 (5%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 LKIR DIPKT F T Y Y+ M FGL N PA F+NLMN+V YL Sbjct: 221 LKIRTGDIPKTAFSTRYGLYEFIVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDIL 280 Query: 403 IYSCNREENE*YLRIVL------*FYKRXXXXXXXXXXLA*FSGILGSHCVQ-*RLSQEG 245 IYS + EE+ +LR+VL Y + +A ++ + V + E Sbjct: 281 IYSKDEEEHAEHLRLVLEKLQKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPVKVEA 340 Query: 244 *SNLELVQTYYAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQKA 65 + + ++ LT Y F+E FS IA L++QL K +F W E+C++ F++ Sbjct: 341 VTEWKAPKSVTEIRSFLGLTGYYRRFIEGFSKIARLMTQLLKKEKKFVWSEQCQESFEQL 400 Query: 64 QDRI 53 ++++ Sbjct: 401 KEKL 404 Score = 57.8 bits (138), Expect(2) = 3e-22 Identities = 30/56 (53%), Positives = 37/56 (66%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR 574 FVKKKDGSMR+ N V +KNKY IDDLF+ L+G V SKI +RS Y++ Sbjct: 165 FVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFNHLKGAKVFSKIDLRSGYHQ 220 >gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica] Length = 1194 Score = 71.6 bits (174), Expect(2) = 8e-22 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 L++R D+PKT FRT Y +Y+ M FGL N PA F++LMNRV ++YL Sbjct: 363 LRVREEDMPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFIDDIL 422 Query: 403 IYSCNREENE*YLRIVL*FYKRXXXXXXXXXXLA*FSGI--LGSHCVQ*RLSQEG*SNLE 230 +YS +++ + +L +VL +R + LG H + +E Sbjct: 423 VYSKSQKAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLG-HVISAEGIYVDPQKIE 481 Query: 229 LVQTYYAY*DL----EFLTVC--YCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQK 68 V + + FL + Y FVE FS IA+ L+ LT KGV+F W ++CE+ F + Sbjct: 482 AVVNWLRPTSVTEIRSFLGLAGYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEESFIE 541 Query: 67 AQDRI 53 + R+ Sbjct: 542 LKTRL 546 Score = 58.9 bits (141), Expect(2) = 8e-22 Identities = 29/59 (49%), Positives = 41/59 (69%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL 565 FVKKKDG+MR+ Q N + ++N+Y IDDLFD+L+G V SKI +RS Y++ R+ Sbjct: 307 FVKKKDGTMRLCVDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRV 365 Score = 66.6 bits (161), Expect = 8e-09 Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 10/116 (8%) Frame = -3 Query: 342 REFYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI*SWSKPTMPTEI*SFL----- 187 R+ YAKFSKC FWLD V FLGH++S+EG +K+E + +W +PT TEI SFL Sbjct: 445 RQLYAKFSKCQFWLDRVSFLGHVISAEGIYVDPQKIEAVVNWLRPTSVTEIRSFLGLAGY 504 Query: 186 --QFVIVVLWRCXXXXXXXXXXXPRRVYNLDGLRSVRSAFKKLKIALTTEPIFVLP 25 +FV R+ +F +LK LTT P+ LP Sbjct: 505 YRRFV-----EGFSTIAAPLTYLTRKGVKFVWSDKCEESFIELKTRLTTAPVLALP 555 >gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis] Length = 1053 Score = 72.0 bits (175), Expect(2) = 8e-22 Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 10/184 (5%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 LKIR DIPKT F T Y Y+ M FGL N PA F+N+MN+V ++L Sbjct: 222 LKIRPEDIPKTAFTTRYGLYEFTVMSFGLTNAPAYFMNMMNKVFMEFLDKFVVVFIDDIL 281 Query: 403 IYSCNREENE*YLRIVL------*FYKRXXXXXXXXXXLA*FSGILGSHCVQ*RLSQ-EG 245 IYS N +E+E +LRI+L Y + +A I+ + V ++ E Sbjct: 282 IYSKNEDEHEDHLRIILGKLRENQLYAKFNKCEFWLSQVAFLGHIVSAGGVAVDPAKVEA 341 Query: 244 *SNLELVQTYYAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQKA 65 + ++ L Y F+E FS IA ++QL K +F W E CEK Q+ Sbjct: 342 VMGWKQPKSVTEVRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEKKFEWTEACEKSLQEL 401 Query: 64 QDRI 53 + R+ Sbjct: 402 KKRL 405 Score = 58.5 bits (140), Expect(2) = 8e-22 Identities = 30/56 (53%), Positives = 38/56 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR 574 FVKKKD SMR+ N V +KNKY IDDLFD+L+G +V SKI +RS Y++ Sbjct: 166 FVKKKDNSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQ 221 >gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group] gi|108711716|gb|ABF99511.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1312 Score = 70.1 bits (170), Expect(2) = 1e-21 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 10/184 (5%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 LKIR DIPKT F T Y Y+ M FGL N PA F+NLMN+V YL Sbjct: 555 LKIRIADIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFVDYLDKFVVVFIDDIL 614 Query: 403 IYSCNREENE*YLRIVL------*FYKRXXXXXXXXXXLA*FSGILGSHCVQ*RLSQ-EG 245 IYS + EE+ +LR+VL Y + +A ++ + V ++ E Sbjct: 615 IYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 674 Query: 244 *SNLELVQTYYAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQKA 65 + + ++ L Y F+E FS IA ++QL K +F W E+C++ F++ Sbjct: 675 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEKKFVWSEQCQESFEQL 734 Query: 64 QDRI 53 ++++ Sbjct: 735 KEKL 738 Score = 60.1 bits (144), Expect(2) = 1e-21 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR 574 FVKKKDGSMR+ N V +KNKY IDDLFD+L+G V SKI +RS Y++ Sbjct: 499 FVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQ 554 >gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1470 Score = 69.7 bits (169), Expect(2) = 1e-21 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 10/184 (5%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 LKIR DIPKT F T Y Y+ M FGL N PA F+NLMN+V YL Sbjct: 640 LKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDIL 699 Query: 403 IYSCNREENE*YLRIVL------*FYKRXXXXXXXXXXLA*FSGILGSHCVQ*RLSQ-EG 245 IYS + EE+ +LR+VL Y + +A ++ + V ++ E Sbjct: 700 IYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEA 759 Query: 244 *SNLELVQTYYAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQKA 65 + + ++ L Y F+E FS IA ++QL K +F W E+C+ F++ Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEKKFAWSEQCQGSFEQL 819 Query: 64 QDRI 53 ++++ Sbjct: 820 KEKL 823 Score = 60.1 bits (144), Expect(2) = 1e-21 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR 574 FVKKKDGSMR+ N V +KNKY IDDLFD+L+G V SKI +RS Y++ Sbjct: 584 FVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQ 639 >gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Japonica Group] gi|22725924|gb|AAN04934.1| Putative polyprotein [Oryza sativa Japonica Group] gi|31430228|gb|AAP52174.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1569 Score = 68.2 bits (165), Expect(2) = 3e-21 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 10/184 (5%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 LKIR DIPKT F T Y Y+ M FGL N PA F+NLMN+V YL Sbjct: 739 LKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFVVVFIDDIL 798 Query: 403 IYSCNREENE*YLRIVL------*FYKRXXXXXXXXXXLA*FSGILGSHCVQ*RLSQ-EG 245 IYS + +E+ +LR+VL Y + +A ++ + V ++ E Sbjct: 799 IYSKDEDEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVAMDPAKVEA 858 Query: 244 *SNLELVQTYYAY*DLEFLTVCYCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQKA 65 + + + L Y F+E FS IA ++QL K +F W E+C++ F++ Sbjct: 859 VTEWKAPKFVTEIRSFIGLAGYYRRFIEGFSKIARPMTQLLKKEKKFVWLEQCQESFEQL 918 Query: 64 QDRI 53 ++++ Sbjct: 919 KEKL 922 Score = 60.5 bits (145), Expect(2) = 3e-21 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR 574 FVKKKDGSMR+ N V +KNKY IDDLFD+L+G V SKI +RS Y++ Sbjct: 683 FVKKKDGSMRMCVDYRSLNEVTIKNKYPLPWIDDLFDQLKGAKVFSKIDLRSGYHQ 738 >ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586067 [Solanum tuberosum] Length = 881 Score = 85.5 bits (210), Expect(2) = 5e-21 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 9/194 (4%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RLE 562 FVKKKDGS+R+ Q N V +KN+Y IDDLFD+L G + SKI +RS Y++ ++ Sbjct: 561 FVKKKDGSLRMCIDYRQLNRVTVKNRYPLPRIDDLFDQLHGASHFSKIDLRSGYHQVKV- 619 Query: 561 RWISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYL-YILVIG 385 R + + R + ++ ++ + + P+ ++++ IL+ Sbjct: 620 RECDIPKTAFRTRYGHYEFVVMSFGLTNAPALFMDLMNRVFKPYLDSFVVVFIDDILIYS 679 Query: 384 KRMSNI*G---LCSNSIRE--FYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI*S 229 + G + +RE YAK+ KC FWL V FLGH+VS +G KK +VI + Sbjct: 680 RGEEEHKGHLRVVLQRLREEKLYAKYEKCEFWLKEVAFLGHVVSGDGIKVDPKKTDVIRN 739 Query: 228 WSKPTMPTEI*SFL 187 W +P P++I SFL Sbjct: 740 WPRPLTPSDIRSFL 753 Score = 42.4 bits (98), Expect(2) = 5e-21 Identities = 19/42 (45%), Positives = 30/42 (71%) Frame = -2 Query: 178 YCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCFQKAQDRI 53 Y FVE FS++AS +++LT K +F W +ECE+ FQ ++R+ Sbjct: 759 YRRFVEGFSSLASPMTKLTQKKAKFVWSDECEESFQTLKERL 800 >gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] Length = 1502 Score = 107 bits (266), Expect = 5e-21 Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 20/265 (7%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RLE 562 FVKKKDGS+R+ Q N V +KNKY IDDLFD+LQG SKI +RS Y++ R+ Sbjct: 680 FVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIR 739 Query: 561 RW----ISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLYIL 394 I+ + G ++ G ++ ++ + + P+ ++++ + Sbjct: 740 NEDIPKIAFQTRYGH-YEFLVMSFG----LTNAPAAFMDLMNRVFKPYLDKFVVVFIDDI 794 Query: 393 VIGKRM----SNI*GLCSNSIRE--FYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVE 241 +I + + +RE YAKFSKC FWL+SV FLGH+VS EG KK+E Sbjct: 795 LIYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIQVDTKKIE 854 Query: 240 VI*SWSKPTMPTEI*SFL-------QFVIVVLWRCXXXXXXXXXXXPRRVYNLDGLRSVR 82 + W +PT TEI SF+ +FV + R+ + + Sbjct: 855 AVEKWPRPTSVTEIRSFVGLAGYYRRFV-----KDFSKIVAPLTKLTRKDTKFEWSDACE 909 Query: 81 SAFKKLKIALTTEPIFVLPAGLRSY 7 ++F+KLK LTT P+ LP G Y Sbjct: 910 NSFEKLKACLTTAPVLSLPQGTGGY 934 >gb|EMJ25340.1| hypothetical protein PRUPE_ppa016115mg [Prunus persica] Length = 1269 Score = 67.4 bits (163), Expect(2) = 2e-20 Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 11/178 (6%) Frame = -2 Query: 574 LKIRAVDIPKTTFRTCYENYD---MYFGLINTPATFINLMNRVIKQYLYSXXXXXXXXXX 404 L++R D+ KT FRT Y +Y+ M FGL N PA F++LMNRV ++YL Sbjct: 473 LRVREEDVTKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFVDDIL 532 Query: 403 IYSCNREENE*YLRIVL*FYKRXXXXXXXXXXLA*FS--GILGSHCVQ*RLSQEG*SNLE 230 +YS +++ + +L +VL +R LG H + +E Sbjct: 533 VYSKSQKAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDIVSFLG-HVISAEGIYVDPQKIE 591 Query: 229 LVQTYYAY*DL----EFLTVC--YCSFVEMFSAIASLLSQLT*KGVQFRWFEECEKCF 74 V + + FL + Y FVE FS IA+ L+ LT KGV+F W ++CE+ F Sbjct: 592 AVVNWLRPTSVTEIRSFLGLARYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEETF 649 Score = 58.5 bits (140), Expect(2) = 2e-20 Identities = 29/59 (49%), Positives = 41/59 (69%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL 565 FVKKKDG+MR+ Q N + ++N+Y IDDLFD+L+G V SKI +RS Y++ R+ Sbjct: 417 FVKKKDGTMRLCIDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRV 475 >gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] Length = 1515 Score = 104 bits (260), Expect = 3e-20 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 15/260 (5%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RL- 565 FVKKKDG++R+ C Q N + +KNKY IDDLFD+LQG TV SK+ +RS Y++ R+ Sbjct: 619 FVKKKDGTLRLCIDCRQLNRMTIKNKYPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIK 678 Query: 564 ERWISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLYILVIG 385 E+ + R ++ + ++ ++ + + P+ I+++ +++ Sbjct: 679 EQDVPKTAFRTRYGHYEFLVMPFGLTNAPAAF--MDLMNRVFHPYLDKFVIVFIDDILVY 736 Query: 384 KRMSNI*G------LCSNSIREFYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI* 232 R ++ L + R+ YAKFSKC FWL VVFLGHIVS G KKVE I Sbjct: 737 SRDNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVFLGHIVSRTGIYVDPKKVEAIL 796 Query: 231 SWSKPTMPTEI*SFLQFVIVVLWRCXXXXXXXXXXXPRRVYNLDGLRSV-----RSAFKK 67 W +P TEI SFL + +R R+ G++ V + F++ Sbjct: 797 QWEQPKTVTEIRSFLG--LAGYYRRFVQGFSLVAAPLTRL-TRKGVKFVWDDVCENRFQE 853 Query: 66 LKIALTTEPIFVLPAGLRSY 7 LK LT+ P+ LP + + Sbjct: 854 LKNRLTSAPVLTLPVNGKGF 873 >gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] Length = 1475 Score = 104 bits (259), Expect = 4e-20 Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 13/259 (5%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RLE 562 FVKKKDG+MR+ Q N V +KN+Y IDDLFD+LQG +V SKI +R Y++ R+ Sbjct: 718 FVKKKDGTMRMCIDYRQLNKVTVKNRYPLPRIDDLFDQLQGASVFSKIDLRFDYHQLRI- 776 Query: 561 RWISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLYILVIGK 382 R + + R +L ++ ++ + + P+ I+++ ++I Sbjct: 777 RAADIPKTAFRTRYGHYELLVMSFGLTNAPAAFMDLMTRVFRPYLDSFVIVFIDDILIYS 836 Query: 381 RM----SNI*GLCSNSIRE--FYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI*S 229 R + ++R+ YAKFSKC FWLDSV FLGH+VS EG K+E I Sbjct: 837 RSRGDHEQHLRVVLQTLRDQRLYAKFSKCQFWLDSVAFLGHVVSKEGIMVDPAKIEAIRD 896 Query: 228 WSKPTMPTEI*SFLQFVIVVLWRCXXXXXXXXXXXPRRVYNLD----GLRSVRSAFKKLK 61 W++PT TEI SF+ + +R R+ +D ++F +LK Sbjct: 897 WARPTSVTEIRSFVG--LAGYYRRFVESFSTLATPLTRLTRVDVPFVWSEECEASFLRLK 954 Query: 60 IALTTEPIFVLPAGLRSYT 4 LTT PI LP +T Sbjct: 955 ELLTTAPILTLPVEGEGFT 973 >ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605741 [Solanum tuberosum] Length = 823 Score = 103 bits (258), Expect = 5e-20 Identities = 83/257 (32%), Positives = 125/257 (48%), Gaps = 18/257 (7%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RLE 562 FVKKKDGSMR+ Q N V ++NKY IDDLFD+LQG ++ SKI +RS Y++ + Sbjct: 161 FVKKKDGSMRMCIDYRQLNKVTIRNKYPIPRIDDLFDQLQGASIFSKIDLRSGYHQLK-- 218 Query: 561 RWISLKQLLGRAMRIMICILG*LIPQ---QHSST**IE*SSNTYIPFSLFS*IIYLYILV 391 + ++ + A R L+ ++ ++ + + P+ I+++ ++ Sbjct: 219 --VRVEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNGVFRPYLDSFVIVFIDDIL 276 Query: 390 IGKRMSN--------I*GLCSNSIREFYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKV 244 I R + G+ ++ YAKFSKC FWL SV FLGH+VS EG KK+ Sbjct: 277 IYSRSKEKHEHHLRIVLGILKE--KKLYAKFSKCEFWLSSVAFLGHVVSKEGIMVDPKKI 334 Query: 243 EVI*SWSKPTMPTEI*SFLQFVIVVLWRCXXXXXXXXXXXPRRVYNLDGL----RSVRSA 76 E + W +P TEI SFL + +R R+ + + + Sbjct: 335 EAVRDWVRPASVTEIRSFLG--LAGYYRRFVEGFSSIASPLTRLTQKEVVFQWSDECEVS 392 Query: 75 FKKLKIALTTEPIFVLP 25 F+KLK LTT PI LP Sbjct: 393 FQKLKTLLTTAPILTLP 409 >ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum] Length = 690 Score = 99.4 bits (246), Expect = 1e-18 Identities = 86/259 (33%), Positives = 124/259 (47%), Gaps = 14/259 (5%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RLE 562 FVKKK GSMR+ Q N V +KNKY ID+LFD+LQG S I +RS Y+ +++ Sbjct: 152 FVKKKYGSMRLCVDYRQLNKVTVKNKYPLPRIDELFDQLQGAQCFSMIDLRSGYHLLKIK 211 Query: 561 RW-ISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLY-ILVI 388 R I+ R ++ + ++ ++ + + PF I+++ ILV Sbjct: 212 RDDITKTAFRTRYGHYEFLVMSFGLTNAPAAF--MDLMNRVFKPFLDQFVIVFIDDILVY 269 Query: 387 GKRMSN-----I*GLCSNSIREFYAKFSKCNFWLDSVVFLGHIVSSEG*A---KKVEVI* 232 K + L + ++ YAKFSKC FWLDSV FLGH+VS G + KVE + Sbjct: 270 SKSKEEHERHLMLVLQTLRDKQLYAKFSKCQFWLDSVAFLGHVVSKNGISVDPSKVEAVH 329 Query: 231 SWSKPTMPTEI*SFLQFVIVVLWRCXXXXXXXXXXXPRRV----YNLDGLRSVRSAFKKL 64 +W +PT EI SFL + +R R+ + +F+KL Sbjct: 330 NWPRPTTVKEIQSFLG--LAGYYRHFVKDFSKVASSLTRLTQKKVKFRWTNACAESFQKL 387 Query: 63 KIALTTEPIFVLPAGLRSY 7 K LT+ PI LP G SY Sbjct: 388 KEYLTSAPILALPIGGESY 406 >gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] Length = 1554 Score = 99.4 bits (246), Expect = 1e-18 Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 16/261 (6%) Frame = -3 Query: 741 FVKKKDGSMRIRTQCCQFNNVILKNKYLFLCIDDLFDRLQGVTVLSKIVVRSRYYR*RLE 562 FV+KKDGS+R+ Q N V +KNKY IDDLF++LQG T SKI +RS Y++ R+ Sbjct: 785 FVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFNQLQGATCFSKIDLRSGYHQLRV- 843 Query: 561 RWISLKQLLGRAMRIMICILG*LIPQQHSST**IE*SSNTYIPFSLFS*IIYLYILVIGK 382 R + + R L ++ ++ + + P+ I+++ +++ Sbjct: 844 RECDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDTFVIVFIDDILVYS 903 Query: 381 RMSNI*GLCSNSI------REFYAKFSKCNFWLDSVVFLGHIVSSEG---*AKKVEVI*S 229 R ++ + YAKFSKC FWL SV FLGHIVS +G K+E + + Sbjct: 904 RNEEDHASHLRTVLQTLKDNKLYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTGKIEAMQN 963 Query: 228 WSKPTMPTEI*SFL-------QFVIVVLWRCXXXXXXXXXXXPRRVYNLDGLRSVRSAFK 70 W +PT PTEI SFL +FV ++ + +F+ Sbjct: 964 WPRPTSPTEIRSFLGLAGYYRRFV-----EGFSSIASPLTKLTQKTVKFRWSEACEKSFQ 1018 Query: 69 KLKIALTTEPIFVLPAGLRSY 7 + K L T P+ LP G + + Sbjct: 1019 EFKKRLITAPVLTLPEGTQGF 1039