BLASTX nr result

ID: Atropa21_contig00021692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00021692
         (603 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237986.1| PREDICTED: uncharacterized protein LOC101252...   254   1e-65
ref|XP_006338134.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   249   5e-64

>ref|XP_004237986.1| PREDICTED: uncharacterized protein LOC101252175 [Solanum
           lycopersicum]
          Length = 1158

 Score =  254 bits (650), Expect = 1e-65
 Identities = 133/205 (64%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
 Frame = +3

Query: 3   FWEGAVPYTRSSIGSLDSTANSPSRNACDIKISDSQSTS-----YARPLIAGVGEQGSNS 167
           FWEG VPYTRS IGSLD  A+ PS++ACDIKISDSQSTS     +A PL+   GEQGSNS
Sbjct: 355 FWEGPVPYTRSRIGSLDGIADPPSKDACDIKISDSQSTSCHPPEFAIPLLPKAGEQGSNS 414

Query: 168 KKNLENPNQIIVEVPKPVNRAESRFEVKDXXXXXXXXXXXXXXXNQVDVHDSRDKCTLPS 347
           KKNLENP  IIVEVPKPVNR ESR E+KD               +Q+DVH SRDKCTL S
Sbjct: 415 KKNLENPTPIIVEVPKPVNRVESRIEIKDQKESSRSSASRSVTLDQLDVHGSRDKCTLTS 474

Query: 348 EQGIFSSSSASGNIKNHDGLKVXXXXXXXPNKSHRGVEGSSSFLQMPKDRQKESSPVRIS 527
           E+G +SSS AS NIK HDGLKV       PN+S+RGVEGS+S LQ+PK+RQK SSP +I+
Sbjct: 475 EEGRYSSSRASANIKKHDGLKVSSLRSSSPNESYRGVEGSASALQLPKERQKGSSPAKIA 534

Query: 528 GNISSTNGRHDIQNLKSAKIDSTQV 602
            NISS N RHDIQN+KS KID TQV
Sbjct: 535 DNISSNNVRHDIQNVKSPKIDGTQV 559


>ref|XP_006338134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Solanum
           tuberosum]
          Length = 1165

 Score =  249 bits (635), Expect = 5e-64
 Identities = 135/205 (65%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
 Frame = +3

Query: 3   FWEGAVPYTRSSIGSLDSTANSPSRNACDIKISDSQSTS-----YARPLIAGVGEQGSNS 167
           FWEG VPYTRS IGSLDS A+ PS+NACDIKISDSQSTS      ARPLI   GEQG NS
Sbjct: 349 FWEGPVPYTRSRIGSLDSIADPPSKNACDIKISDSQSTSCRPPEIARPLIPEAGEQGPNS 408

Query: 168 KKNLENPNQIIVEVPKPVNRAESRFEVKDXXXXXXXXXXXXXXXNQVDVHDSRDKCTLPS 347
           K NLENP  I+VEV KPVNRAESRFE+KD               +Q+DVH SRDKCTL S
Sbjct: 409 KTNLENPTPIMVEVLKPVNRAESRFEIKDQKESTRSSASRSVTSDQLDVHGSRDKCTLIS 468

Query: 348 EQGIFSSSSASGNIKNHDGLKVXXXXXXXPNKSHRGVEGSSSFLQMPKDRQKESSPVRIS 527
           E+G +SSSSAS N+K HDGLKV       P+KS+RGVEGS+S LQ+ KDRQK S P +IS
Sbjct: 469 EEGRYSSSSASANLKKHDGLKVSSLRSSSPSKSYRGVEGSTSALQLSKDRQKGSFPAKIS 528

Query: 528 GNISSTNGRHDIQNLKSAKIDSTQV 602
            NISS N RHDIQN+KSAKI+ TQV
Sbjct: 529 DNISS-NNRHDIQNVKSAKINGTQV 552


Top