BLASTX nr result
ID: Atropa21_contig00021680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021680
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006357192.1| PREDICTED: SWI/SNF complex component SNF12 h... 113 3e-23
ref|XP_004233296.1| PREDICTED: SWI/SNF complex component SNF12 h... 110 3e-22
ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 h... 105 6e-21
gb|ESW23522.1| hypothetical protein PHAVU_004G054400g [Phaseolus... 104 1e-20
ref|XP_004489606.1| PREDICTED: SWI/SNF complex component SNF12 h... 104 1e-20
ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h... 104 1e-20
ref|XP_002328887.1| chromatin remodeling complex subunit [Populu... 102 7e-20
ref|XP_004975382.1| PREDICTED: SWI/SNF complex component SNF12 h... 101 1e-19
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h... 101 1e-19
ref|NP_196921.1| chromodomain remodeling complex protein CHC1 [A... 100 2e-19
ref|XP_006399928.1| hypothetical protein EUTSA_v10013213mg [Eutr... 100 2e-19
ref|XP_006287459.1| hypothetical protein CARUB_v10000669mg [Caps... 100 2e-19
ref|XP_002873653.1| SWIB complex BAF60b domain-containing protei... 100 2e-19
ref|XP_004233295.1| PREDICTED: SWI/SNF complex component SNF12 h... 100 2e-19
emb|CBI21359.3| unnamed protein product [Vitis vinifera] 100 2e-19
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h... 100 2e-19
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera] 100 2e-19
ref|XP_002298619.1| SWIB complex BAF60b domain-containing family... 100 3e-19
ref|XP_006447079.1| hypothetical protein CICLE_v10014820mg [Citr... 100 3e-19
ref|XP_004953521.1| PREDICTED: SWI/SNF complex component SNF12 h... 99 4e-19
>ref|XP_006357192.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Solanum
tuberosum]
Length = 550
Score = 113 bits (282), Expect = 3e-23
Identities = 56/63 (88%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKP-ASDTP 281
SP+EFINALLESQSKDLKVV+GEPS N EKERRSQFYSQPWVEDAVIRY+NRKP ASD P
Sbjct: 488 SPVEFINALLESQSKDLKVVSGEPSRNVEKERRSQFYSQPWVEDAVIRYLNRKPAASDAP 547
Query: 280 GSG 272
GSG
Sbjct: 548 GSG 550
>ref|XP_004233296.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform 2
[Solanum lycopersicum]
Length = 544
Score = 110 bits (274), Expect = 3e-22
Identities = 54/63 (85%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKP-ASDTP 281
SP+EFI+ALLESQSKDLKVV+GEPS N EKERRSQFYSQPWVEDAVIRY+NRKP A+D P
Sbjct: 482 SPVEFIDALLESQSKDLKVVSGEPSRNVEKERRSQFYSQPWVEDAVIRYLNRKPAAADAP 541
Query: 280 GSG 272
GSG
Sbjct: 542 GSG 544
>ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1
[Glycine max] gi|571555115|ref|XP_006604071.1|
PREDICTED: SWI/SNF complex component SNF12 homolog
isoform X2 [Glycine max]
Length = 543
Score = 105 bits (262), Expect = 6e-21
Identities = 51/63 (80%), Positives = 58/63 (92%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EFINAL+ESQSKDLK+V+GEPS NAEKERRS F++QPWVEDAVIRY+NRKPA SD
Sbjct: 480 SPVEFINALIESQSKDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDA 539
Query: 283 PGS 275
PGS
Sbjct: 540 PGS 542
>gb|ESW23522.1| hypothetical protein PHAVU_004G054400g [Phaseolus vulgaris]
gi|561024838|gb|ESW23523.1| hypothetical protein
PHAVU_004G054400g [Phaseolus vulgaris]
Length = 547
Score = 104 bits (259), Expect = 1e-20
Identities = 50/63 (79%), Positives = 58/63 (92%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EFINAL+ESQS+DLK+V+GEPS NAEKERRS F++QPWVEDAVIRY+NRKPA SD
Sbjct: 484 SPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDA 543
Query: 283 PGS 275
PGS
Sbjct: 544 PGS 546
>ref|XP_004489606.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1
[Cicer arietinum] gi|502091676|ref|XP_004489607.1|
PREDICTED: SWI/SNF complex component SNF12 homolog
isoform X2 [Cicer arietinum]
gi|502091680|ref|XP_004489608.1| PREDICTED: SWI/SNF
complex component SNF12 homolog isoform X3 [Cicer
arietinum]
Length = 550
Score = 104 bits (259), Expect = 1e-20
Identities = 51/63 (80%), Positives = 57/63 (90%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EFINAL+ESQSKDLKV AGEPS NAEKER S+F++QPWVEDAVIRY+NRKPA SD
Sbjct: 487 SPVEFINALIESQSKDLKVAAGEPSRNAEKERGSEFFNQPWVEDAVIRYLNRKPAAGSDA 546
Query: 283 PGS 275
PGS
Sbjct: 547 PGS 549
>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 543
Score = 104 bits (259), Expect = 1e-20
Identities = 50/63 (79%), Positives = 58/63 (92%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EFINAL+ESQS+DLK+V+GEPS NAEKERRS F++QPWVEDAVIRY+NRKPA SD
Sbjct: 480 SPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDA 539
Query: 283 PGS 275
PGS
Sbjct: 540 PGS 542
>ref|XP_002328887.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|566212489|ref|XP_006373227.1| SWIB complex BAF60b
domain-containing family protein [Populus trichocarpa]
gi|550319933|gb|ERP51024.1| SWIB complex BAF60b
domain-containing family protein [Populus trichocarpa]
Length = 408
Score = 102 bits (253), Expect = 7e-20
Identities = 49/63 (77%), Positives = 57/63 (90%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EF+NAL+ESQSKDL++VAGE S NAEKERRS F++QPWVEDAVIRY+NRKPA SD
Sbjct: 345 SPVEFVNALIESQSKDLRLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDA 404
Query: 283 PGS 275
PGS
Sbjct: 405 PGS 407
>ref|XP_004975382.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Setaria
italica]
Length = 534
Score = 101 bits (251), Expect = 1e-19
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPASDTPG 278
SP+EFINAL+ SQSKDLK+VAGE + N E+ERR+ FY+QPWVEDAVIRY+NRKPAS+ PG
Sbjct: 469 SPVEFINALIASQSKDLKLVAGEANRNVERERRADFYNQPWVEDAVIRYLNRKPASEGPG 528
Query: 277 SG 272
G
Sbjct: 529 GG 530
>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus] gi|449515744|ref|XP_004164908.1| PREDICTED:
SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
Length = 547
Score = 101 bits (251), Expect = 1e-19
Identities = 50/63 (79%), Positives = 57/63 (90%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EFI+AL+ESQSKDLK++AGE S NAEKERRS F++QPWVEDAVIRYINRKPA SD
Sbjct: 484 SPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATGSDA 543
Query: 283 PGS 275
PGS
Sbjct: 544 PGS 546
>ref|NP_196921.1| chromodomain remodeling complex protein CHC1 [Arabidopsis thaliana]
gi|73622093|sp|Q9FMT4.1|SNF12_ARATH RecName:
Full=SWI/SNF complex component SNF12 homolog
gi|9757798|dbj|BAB08296.1| unnamed protein product
[Arabidopsis thaliana] gi|17473640|gb|AAL38282.1|
unknown protein [Arabidopsis thaliana]
gi|31711950|gb|AAP68331.1| At5g14170 [Arabidopsis
thaliana] gi|332004612|gb|AED91995.1| chromodomain
remodeling complex protein CHC1 [Arabidopsis thaliana]
Length = 534
Score = 100 bits (250), Expect = 2e-19
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPASDTPG 278
SP+EFINAL+ESQSKDLKVVAGE S NAE+ERRS F++QPWVEDAVIRY+NR+PA+ G
Sbjct: 471 SPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDG 530
Query: 277 SG 272
G
Sbjct: 531 PG 532
>ref|XP_006399928.1| hypothetical protein EUTSA_v10013213mg [Eutrema salsugineum]
gi|557101018|gb|ESQ41381.1| hypothetical protein
EUTSA_v10013213mg [Eutrema salsugineum]
Length = 534
Score = 100 bits (250), Expect = 2e-19
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPASDTPG 278
SP+EFINAL+ESQSKDLKVVAGE S NAE+ERRS F++QPWVEDAVIRY+NR+PA+ G
Sbjct: 471 SPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNEG 530
Query: 277 SG 272
G
Sbjct: 531 PG 532
>ref|XP_006287459.1| hypothetical protein CARUB_v10000669mg [Capsella rubella]
gi|565458922|ref|XP_006287460.1| hypothetical protein
CARUB_v10000669mg [Capsella rubella]
gi|565458924|ref|XP_006287461.1| hypothetical protein
CARUB_v10000669mg [Capsella rubella]
gi|482556165|gb|EOA20357.1| hypothetical protein
CARUB_v10000669mg [Capsella rubella]
gi|482556166|gb|EOA20358.1| hypothetical protein
CARUB_v10000669mg [Capsella rubella]
gi|482556167|gb|EOA20359.1| hypothetical protein
CARUB_v10000669mg [Capsella rubella]
Length = 536
Score = 100 bits (250), Expect = 2e-19
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPASDTPG 278
SP+EFINAL+ESQSKDLKVVAGE S NAE+ERRS F++QPWVEDAVIRY+NR+PA+ G
Sbjct: 473 SPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNEG 532
Query: 277 SG 272
G
Sbjct: 533 PG 534
>ref|XP_002873653.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319490|gb|EFH49912.1| SWIB complex
BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 100 bits (250), Expect = 2e-19
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPASDTPG 278
SP+EFINAL+ESQSKDLKVVAGE S NAE+ERRS F++QPWVEDAVIRY+NR+PA+ G
Sbjct: 471 SPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDG 530
Query: 277 SG 272
G
Sbjct: 531 PG 532
>ref|XP_004233295.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform 1
[Solanum lycopersicum]
Length = 545
Score = 100 bits (249), Expect = 2e-19
Identities = 53/64 (82%), Positives = 58/64 (90%), Gaps = 2/64 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQP-WVEDAVIRYINRKP-ASDT 284
SP+EFI+ALLESQSKDLKVV+GEPS N EKERRSQFYSQP VEDAVIRY+NRKP A+D
Sbjct: 482 SPVEFIDALLESQSKDLKVVSGEPSRNVEKERRSQFYSQPCGVEDAVIRYLNRKPAAADA 541
Query: 283 PGSG 272
PGSG
Sbjct: 542 PGSG 545
>emb|CBI21359.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 100 bits (249), Expect = 2e-19
Identities = 49/63 (77%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKP--ASDT 284
SP+EFIN L+ESQSKDLK+VAGE S NAEKERRS F++QPWVEDAVIRY+NRKP SD
Sbjct: 414 SPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDA 473
Query: 283 PGS 275
PGS
Sbjct: 474 PGS 476
>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 548
Score = 100 bits (249), Expect = 2e-19
Identities = 49/63 (77%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKP--ASDT 284
SP+EFIN L+ESQSKDLK+VAGE S NAEKERRS F++QPWVEDAVIRY+NRKP SD
Sbjct: 485 SPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDA 544
Query: 283 PGS 275
PGS
Sbjct: 545 PGS 547
>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
Length = 548
Score = 100 bits (249), Expect = 2e-19
Identities = 49/63 (77%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKP--ASDT 284
SP+EFIN L+ESQSKDLK+VAGE S NAEKERRS F++QPWVEDAVIRY+NRKP SD
Sbjct: 485 SPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDA 544
Query: 283 PGS 275
PGS
Sbjct: 545 PGS 547
>ref|XP_002298619.1| SWIB complex BAF60b domain-containing family protein [Populus
trichocarpa] gi|222845877|gb|EEE83424.1| SWIB complex
BAF60b domain-containing family protein [Populus
trichocarpa]
Length = 555
Score = 100 bits (248), Expect = 3e-19
Identities = 49/63 (77%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EF+NAL+ESQSKDLK+VAGE S NAEKERRS F++QPWVEDAVIRY+NRKPA SD
Sbjct: 492 SPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDA 551
Query: 283 PGS 275
P S
Sbjct: 552 PRS 554
>ref|XP_006447079.1| hypothetical protein CICLE_v10014820mg [Citrus clementina]
gi|568831605|ref|XP_006470052.1| PREDICTED: SWI/SNF
complex component SNF12 homolog isoform X1 [Citrus
sinensis] gi|568831607|ref|XP_006470053.1| PREDICTED:
SWI/SNF complex component SNF12 homolog isoform X2
[Citrus sinensis] gi|557549690|gb|ESR60319.1|
hypothetical protein CICLE_v10014820mg [Citrus
clementina]
Length = 545
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/63 (77%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPA--SDT 284
SP+EFIN L+ESQSKDLK+VAGE S +AEKERRS F++QPWVEDAVIRY+NRKPA SD
Sbjct: 482 SPVEFINTLIESQSKDLKLVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDA 541
Query: 283 PGS 275
PGS
Sbjct: 542 PGS 544
>ref|XP_004953521.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Setaria
italica]
Length = 535
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/62 (72%), Positives = 54/62 (87%)
Frame = -2
Query: 457 SPIEFINALLESQSKDLKVVAGEPSWNAEKERRSQFYSQPWVEDAVIRYINRKPASDTPG 278
SP+EFIN L+ SQSKDLK+VAGE + N EKERR+ FY+QPWVEDAVIRY+NRKPA++ PG
Sbjct: 470 SPVEFINGLIASQSKDLKLVAGEANRNIEKERRADFYNQPWVEDAVIRYLNRKPANEGPG 529
Query: 277 SG 272
G
Sbjct: 530 GG 531