BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00021639
         (979 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   499   e-139
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   489   e-136
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-101
gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p...   374   e-101
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   368   2e-99
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   365   1e-98
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   363   4e-98
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   363   7e-98
gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus pe...   355   1e-95
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   352   2e-94
gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus...   335   1e-89
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   332   1e-88
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   327   3e-87
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   327   3e-87
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   316   1e-83
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   315   1e-83
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   308   3e-81
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr...   304   3e-80
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   304   3e-80
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   302   1e-79

>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  499 bits (1286), Expect = e-139
 Identities = 249/281 (88%), Positives = 262/281 (93%), Gaps = 1/281 (0%)
 Frame = -2

Query: 840 MPPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           M   VCSS    TSISKFISDQPYLHMLETKC+TMTDLKKIHA LIK+GLIKDKIASSRV
Sbjct: 1   MSSSVCSS----TSISKFISDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRV 56

Query: 660 LAFSAKSP-IGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEI 484
           LAFSAKSP IGDINYANLVF+HIENPNLFTWN IIRGFSESSTP YAIHLFIEMLN S++
Sbjct: 57  LAFSAKSPPIGDINYANLVFTHIENPNLFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQV 116

Query: 483 QPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARK 304
           QPHLLTYPSVFKAYAR GL K+GAQLHGRIIKLGLE DTFIRNTML+MYA CGFLVEARK
Sbjct: 117 QPHLLTYPSVFKAYARGGLVKNGAQLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARK 176

Query: 303 LFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEA 124
           LFDEDE+EDVV+WNSMIMGLAKS EIDDSWRLFSKM TRNDVSWNSMISGFVRNGKW+EA
Sbjct: 177 LFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEA 236

Query: 123 LDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           L+LFSTMQ+E IKPSEFTLVSLLNACGHLGALE+GNWIYKY
Sbjct: 237 LELFSTMQEENIKPSEFTLVSLLNACGHLGALEQGNWIYKY 277



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 55/223 (24%), Positives = 98/223 (43%)
 Frame = -2

Query: 690 IKDKIASSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLF 511
           I+D ++ + ++   AKS  G+I+ +  +FS +   N  +WN +I GF  +     A+ LF
Sbjct: 183 IEDVVSWNSMIMGLAKS--GEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELF 240

Query: 510 IEMLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAG 331
             M     I+P   T  S+  A    G  + G  ++  + K  +EL+  +   ++ MY  
Sbjct: 241 STM-QEENIKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCK 299

Query: 330 CGFLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGF 151
           CG                                ++ +W +F  +  +   SWNSMI G 
Sbjct: 300 CG-------------------------------NVEMAWHVFISISNKGLSSWNSMILGL 328

Query: 150 VRNGKWSEALDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEE 22
             NG   +A+ LF+ +Q   +KP   + + +L AC H G +++
Sbjct: 329 ATNGFEDDAIKLFARLQCSILKPDSVSFIGVLTACNHSGLVDK 371


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  489 bits (1260), Expect = e-136
 Identities = 242/281 (86%), Positives = 261/281 (92%), Gaps = 1/281 (0%)
 Frame = -2

Query: 840 MPPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           M   VCSS    TSISKFI DQPYLHMLETKC+TMTDLKKIHA LIK+GLIKDKIA+SRV
Sbjct: 1   MSSSVCSS----TSISKFILDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRV 56

Query: 660 LAFSAKSP-IGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEI 484
           LAFSAKSP IGDINYANLVF+HIENPN FTWN IIRGFSESSTP YAIHLFIEMLN S++
Sbjct: 57  LAFSAKSPPIGDINYANLVFTHIENPNPFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQV 116

Query: 483 QPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARK 304
           QPHLLTYPSVFKAYAR G+AK+GAQLHGRI+KLGLE DTFIRNT+L+MYA CGFLVEARK
Sbjct: 117 QPHLLTYPSVFKAYARGGIAKNGAQLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARK 176

Query: 303 LFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEA 124
           LFDEDE+EDVV+WNSMI+GLAKS EIDDSWRLFSKM TRNDVSWNSMISGFVRNGKW+EA
Sbjct: 177 LFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEA 236

Query: 123 LDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           L+LFSTMQ+E +KPSEFTLVSLLNACGHLGALE+GNWIYKY
Sbjct: 237 LELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKY 277



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 54/223 (24%), Positives = 96/223 (43%)
 Frame = -2

Query: 690 IKDKIASSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLF 511
           I+D ++ + ++   AKS  G+I+ +  +FS +   N  +WN +I GF  +     A+ LF
Sbjct: 183 IEDVVSWNSMIIGLAKS--GEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELF 240

Query: 510 IEMLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAG 331
             M     ++P   T  S+  A    G  + G  ++  + K  +EL+  +   ++ MY  
Sbjct: 241 STM-QEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCK 299

Query: 330 CGFLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGF 151
           C                                 ++ +W +F     +   SWNSMI G 
Sbjct: 300 CA-------------------------------NVEMAWHVFVSSSNKGLSSWNSMILGL 328

Query: 150 VRNGKWSEALDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEE 22
             NG   +A+ LF+ +Q   +KP   + + +L AC H G +E+
Sbjct: 329 ATNGFEDDAIKLFARLQCSILKPDSVSFIGVLTACNHSGLVEK 371


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  375 bits (964), Expect = e-101
 Identities = 188/280 (67%), Positives = 220/280 (78%)
 Frame = -2

Query: 840 MPPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           M PC CS    STSISKFISD+P+L MLE +C+ M DL+KIHA LIKTGL  D +A+SRV
Sbjct: 1   MTPCCCSFTS-STSISKFISDKPHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRV 59

Query: 660 LAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQ 481
           LAF A SP GDINYA +VF HI NPNLF WN IIRGFS SS P  AI LFI+ML TS +Q
Sbjct: 60  LAFCA-SPAGDINYAYMVFRHIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQ 118

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           P  LTYPSVFKAYA+ GLA  GAQLHGR++KLGLE D F+RNT++HMY+ CG L EAR++
Sbjct: 119 PQRLTYPSVFKAYAQLGLAHDGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRV 178

Query: 300 FDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEAL 121
           FDED   D+VAWNSMIMGL+K  E+ +S RLF KM  RN +SWNSMI G VRNG ++EAL
Sbjct: 179 FDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEAL 238

Query: 120 DLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           DLF  MQK+KIKPSEFT+VSLLNA   LGA+ +G WI++Y
Sbjct: 239 DLFGEMQKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEY 278



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
 Frame = -2

Query: 642 SPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTY 463
           S  G++  +  +F  +   N  +WN +I G   +     A+ LF EM    +I+P   T 
Sbjct: 198 SKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALDLFGEM-QKQKIKPSEFTM 256

Query: 462 PSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEV 283
            S+  A A+ G  + G  +H  I K  ++L+  +   +++MY+ CG + +A  +F+    
Sbjct: 257 VSLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPR 316

Query: 282 EDVVAWNSMIMGLAKSEEIDDSWRLFSKMETR----NDVSWNSMISGFVRNGKWSEALDL 115
             +  WNS+IMGLA +   +++  LFS++++     +DVS+  +++    +G   +A   
Sbjct: 317 TGLSCWNSIIMGLATNGCEEEAIELFSRLKSSSFVPDDVSFLGVLTACSHSGMVEKARKY 376

Query: 114 FSTMQKE-KIKPSEFTLVSLLNACGHLGALEE 22
           FS M++  +I PS      +++  G  G LEE
Sbjct: 377 FSVMRETYRIAPSIKHYSCMVDVLGRAGLLEE 408


>gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 538

 Score =  374 bits (959), Expect = e-101
 Identities = 187/281 (66%), Positives = 225/281 (80%), Gaps = 1/281 (0%)
 Frame = -2

Query: 840 MPPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           M  C CS  P   SI+KFISDQPYL +LE  C++M DLKK+HAQLIKTGL+ D IA+SRV
Sbjct: 1   MVQCFCSLTPSPASITKFISDQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRV 60

Query: 660 LAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQ 481
           LAF   SP GD+NYA LVF+ I+NPNLFTWN IIRGFS+SS P  AI LFI+ML  S IQ
Sbjct: 61  LAFCV-SPAGDMNYAYLVFTQIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQ 119

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           P  LTYPSVFKAYA+ GLA  G QLHGR+IKLGL+ D FIRNT+++MYA CG L EA ++
Sbjct: 120 PERLTYPSVFKAYAQLGLACDGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGLLSEAWRM 179

Query: 300 FDEDEVE-DVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEA 124
           FDE+ +E D+VAWNSMI+GLAK  E+D+S RLF+KM +RN VSWNSMISG+VRNG++ EA
Sbjct: 180 FDEEHMELDIVAWNSMIIGLAKCGEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEA 239

Query: 123 LDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           L+LF  MQ+E I+PSEFT+VSLLNAC  LGA+ +G WI+ Y
Sbjct: 240 LELFQEMQEEHIRPSEFTMVSLLNACACLGAITQGKWIHDY 280



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G+++ +  +F+ + + N  +WN +I G+  +   L A+ LF EM     I+P   T  S+
Sbjct: 203 GEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEALELFQEM-QEEHIRPSEFTMVSL 261

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A  G    G  +H  I+K   EL+  +   ++ MY  CG   +A ++F     E +
Sbjct: 262 LNACACLGAITQGKWIHDYILKQNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKEGL 321

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMET----RNDVSWNSMISGFVRNGKWSEALDLFST 106
             WNSMI+GLA +   +++ +LFSK+E+     + V++  ++      G   +A   FS 
Sbjct: 322 SCWNSMILGLATNGCENEARQLFSKLESLSLKPDHVTFIGVLMACNSAGMVDKAKYYFSL 381

Query: 105 M-QKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           M +K KIKP+      +++  G+ G LEE   + +
Sbjct: 382 MTEKYKIKPTIKHYSCMVDVLGNAGLLEEAEQLIR 416


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  368 bits (944), Expect = 2e-99
 Identities = 185/277 (66%), Positives = 219/277 (79%)
 Frame = -2

Query: 831 CVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAF 652
           C  +S  PSTSISKFISD P+L +LE  C+TM DL+KIHA L+KTGL K  +A S VLAF
Sbjct: 6   CSLTSPSPSTSISKFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAF 65

Query: 651 SAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHL 472
            A SP GDINYA LVF+ I +PNLF+WN IIRGFS+SSTP +AI LFI+ML  S +QPH 
Sbjct: 66  CATSPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHR 125

Query: 471 LTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDE 292
           LTYPSVFKAYA+ GLA +GAQLHGR+IKLGL+ D FIRNT+++MYA CGFL E  K F E
Sbjct: 126 LTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYE 185

Query: 291 DEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLF 112
               D+VAWNSMIMGLAK  E+D+S +LF +M  RN VSWNSMISG+VRNG+  EALDLF
Sbjct: 186 RMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLF 245

Query: 111 STMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
             MQ+E+IKPSEFT+VSLLNA   LGAL++G WI+ Y
Sbjct: 246 GQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDY 282



 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 62/209 (29%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G+++ +  +F  +   N  +WN +I G+  +     A+ LF +M     I+P   T  S+
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQM-QEERIKPSEFTMVSL 263

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A AR G  K G  +H  I K   EL+  +  +++ MY  CG + EA ++F+   ++ +
Sbjct: 264 LNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGL 323

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETRN----DVSWNSMISGFVRNGKWSEALDLFST 106
            +WN+MI+GLA +   +++ +LFS++E  N    DV++  +++    +G   +A + FS 
Sbjct: 324 SSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSL 383

Query: 105 MQKE-KIKPSEFTLVSLLNACGHLGALEE 22
           M K  KI+PS      +++  G  G LEE
Sbjct: 384 MSKTYKIEPSIKHYSCMVDTLGRAGLLEE 412


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  365 bits (938), Expect = 1e-98
 Identities = 188/284 (66%), Positives = 221/284 (77%), Gaps = 4/284 (1%)
 Frame = -2

Query: 840 MPPCVCSS----NPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIA 673
           M P  CS     +P  TSI+KFISDQP+L MLE +C+TM+DL+KIHA LIKTGLI   IA
Sbjct: 1   MTPFCCSQTFTPSPSPTSIAKFISDQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIA 60

Query: 672 SSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNT 493
           SSR+LAF A SP G+INYA +VFS I+NPNLF WN IIRGFS SSTP  AI LFI+ML  
Sbjct: 61  SSRLLAFCA-SPAGNINYALMVFSQIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVG 119

Query: 492 SEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVE 313
           S ++P  LTYPSVFKAYA+ GLA  GAQLHGR+IKLGL+ D F+RNT++HMY  CGFL E
Sbjct: 120 SPLEPQRLTYPSVFKAYAQLGLACFGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSE 179

Query: 312 ARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKW 133
           AR+LFDE    D+VAWNSMIMGL+K  E+ +S RLF +M  RN VSWNSMISG+VRNGK 
Sbjct: 180 ARQLFDESSELDLVAWNSMIMGLSKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKC 239

Query: 132 SEALDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
            EAL+LF  MQ E IK SEFT+VSLLNA G LGA+ +G WI++Y
Sbjct: 240 VEALELFGKMQGEGIKASEFTMVSLLNASGRLGAIRQGEWIHEY 283



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
 Frame = -2

Query: 642 SPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTY 463
           S  G++  +  +F  +   N  +WN +I G+  +   + A+ LF +M     I+    T 
Sbjct: 203 SKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQGEG-IKASEFTM 261

Query: 462 PSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEV 283
            S+  A  R G  + G  +H  I K G+EL+  +   ++ MY  CG + +A  +F     
Sbjct: 262 VSLLNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPK 321

Query: 282 EDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRND-----VSWNSMISGFVRNGKWSEALD 118
             +  WNSM+MGLA +   +++  LFS++E+  D     VS+ ++++    +G   +A D
Sbjct: 322 LGLSCWNSMVMGLAMNGCEEEALELFSRLESSIDLRPDGVSFLAVLTACNHSGMVDKARD 381

Query: 117 LFSTMQ-KEKIKPSEFTLVSLLNACGHLGALEE 22
            FS M+ K  I+PS      +++  G  G LEE
Sbjct: 382 YFSLMRGKYNIEPSTRHYSCMVDVLGKAGHLEE 414


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  363 bits (933), Expect = 4e-98
 Identities = 186/277 (67%), Positives = 221/277 (79%), Gaps = 1/277 (0%)
 Frame = -2

Query: 828 VCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAFS 649
           V S  P  TS+SKFISDQP L +L+ +C++M DLKKIHA LIKTGL KD IA+SR+LAF 
Sbjct: 3   VWSQIPSPTSMSKFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFC 62

Query: 648 AKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLL 469
             SP GDINYA LVF+ I+ PNLF WN IIRGFS+SSTP  AI LFI+ML TS IQP  L
Sbjct: 63  T-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 121

Query: 468 TYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDED 289
           TYPS+FKAYA+ GLA+ GAQLHGR++K GLE D FI NT+++MYA CGFL EAR +FDE 
Sbjct: 122 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEV 181

Query: 288 EVE-DVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLF 112
           + E DVVAWNSMI+GLAK  EID+S RLF KM +RN VSWNSMISG+VRN K+ EAL+LF
Sbjct: 182 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 241

Query: 111 STMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
             MQ++ IKPSEFT+VSLLNAC  LGA+ +G WI+ +
Sbjct: 242 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 278



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G+I+ +  +F  + + N  +WN +I G+  +     A+ LF EM     I+P   T  S+
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSL 259

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A+ G  + G  +H  ++    EL+T +   ++ MY  CG    A ++F+    + +
Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 319

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETRN----DVSWNSMISGFVRNGKWSEALDLFST 106
             WNSM+ GLA +   +++ +LFS +++ N     +S+ ++++    +GK ++A D F+ 
Sbjct: 320 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 379

Query: 105 M-QKEKIKPSEFTLVSLLNACGHLGALEE 22
           M +  KIKPS      +++A G  G LEE
Sbjct: 380 MTETYKIKPSIKHYSCMVDALGRAGLLEE 408


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  363 bits (931), Expect = 7e-98
 Identities = 185/277 (66%), Positives = 220/277 (79%), Gaps = 1/277 (0%)
 Frame = -2

Query: 828 VCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAFS 649
           V S  P  TS+SKFISDQP L +L+ +C++M DLKKIHA LIKTGL KD IA+SR+L F 
Sbjct: 3   VWSQIPSPTSMSKFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFC 62

Query: 648 AKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLL 469
             SP GDINYA LVF+ I+ PNLF WN IIRGFS+SSTP  AI LFI+ML TS IQP  L
Sbjct: 63  T-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 121

Query: 468 TYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDED 289
           TYPS+FKAYA+ GLA+ GAQLHGR++K GLE D FI NT+++MYA CGFL EAR +FDE 
Sbjct: 122 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 181

Query: 288 EVE-DVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLF 112
           + E DVVAWNSMI+GLAK  EID+S RLF KM +RN VSWNSMISG+VRN K+ EAL+LF
Sbjct: 182 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 241

Query: 111 STMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
             MQ++ IKPSEFT+VSLLNAC  LGA+ +G WI+ +
Sbjct: 242 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 278



 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G+I+ +  +F  + + N  +WN +I G+  +     A+ LF EM     I+P   T  S+
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSL 259

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A+ G  + G  +H  ++    EL+T +   ++ MY  CG    A ++F+    + +
Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 319

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETRN----DVSWNSMISGFVRNGKWSEALDLFST 106
             WNSM+ GLA +   +++ +LFS +++ N      S+ ++++    +GK ++A D F+ 
Sbjct: 320 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLTPDYTSFIAVLTACNHSGKVNQAKDYFTL 379

Query: 105 M-QKEKIKPSEFTLVSLLNACGHLGALEE 22
           M +  KIKPS      +++A G  G LEE
Sbjct: 380 MTETYKIKPSIKHYSCMVDALGRAGLLEE 408


>gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica]
          Length = 297

 Score =  355 bits (911), Expect = 1e-95
 Identities = 178/259 (68%), Positives = 213/259 (82%)
 Frame = -2

Query: 840 MPPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           M PC CS    STSISKFIS++P+L MLE +C+ M DL+KIHA LIKTGL+ D +A+SRV
Sbjct: 1   MTPCCCSFTS-STSISKFISERPHLSMLEKQCTNMKDLQKIHAHLIKTGLVSDTVAASRV 59

Query: 660 LAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQ 481
           LAF A SP G+INYA +VF +I+NPNLF WN IIRGFSES +P  AI LFI+ML TS I+
Sbjct: 60  LAFCA-SPAGNINYAYMVFRNIQNPNLFIWNTIIRGFSESPSPEIAISLFIDMLVTSAIE 118

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           PH LTYPSVFKAYA+ GLA+ GAQLHGRI+KLGLE D FIRNT++HMYA CGFL+EAR++
Sbjct: 119 PHRLTYPSVFKAYAQLGLAQDGAQLHGRILKLGLESDQFIRNTIIHMYANCGFLIEARRM 178

Query: 300 FDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEAL 121
           FDED   D VAWNSMIMGL+K  E+ ++ RLF K   RN VSWNSMISGFVRNGK++EAL
Sbjct: 179 FDEDLECDTVAWNSMIMGLSKWGEVSEAKRLFDKFSLRNSVSWNSMISGFVRNGKYTEAL 238

Query: 120 DLFSTMQKEKIKPSEFTLV 64
           +LFS MQ+E++KPSEFT+V
Sbjct: 239 ELFSEMQEERVKPSEFTMV 257


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  352 bits (902), Expect = 2e-94
 Identities = 178/280 (63%), Positives = 213/280 (76%)
 Frame = -2

Query: 840 MPPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           M P  C   P   +ISK ISDQ YL ML+  C+TM DLKKIH+QLIKTGL KD  A+SR+
Sbjct: 1   MVPFCCLLPPSPATISKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRI 60

Query: 660 LAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQ 481
           LAF A SP GDINYA LVF  I+NPN+F WN IIRGFS SS P  +I L+I+ML TS +Q
Sbjct: 61  LAFCA-SPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQ 119

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           P  LTYPSVFKA+A+  LA  GAQLHG++IKLGLE D+FIRNT+L MY  CGF  EARK+
Sbjct: 120 PQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKV 179

Query: 300 FDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEAL 121
           FD     D+VAWN+MIMG+AK   +D+S RLF KM  RN VSWNSMISG+VRNG++ +AL
Sbjct: 180 FDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDAL 239

Query: 120 DLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           +LF  MQ E+I+PSEFT+VSLLNAC  LGA+ +G WI+ Y
Sbjct: 240 ELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDY 279



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
 Frame = -2

Query: 747 CSTMTDLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWN 568
           C   ++ +K+  +    G+  D +A + ++   AK   G ++ +  +F  +   N  +WN
Sbjct: 170 CGFTSEARKVFDR----GMDFDIVAWNTMIMGVAKC--GLVDESRRLFDKMSLRNAVSWN 223

Query: 567 IIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIK 388
            +I G+  +     A+ LF +M     I+P   T  S+  A A  G  + G  +H  ++K
Sbjct: 224 SMISGYVRNGRFFDALELFQKM-QVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVK 282

Query: 387 LGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRL 208
              EL+  +   ++ MY+ CG + +A ++F       +  WNSMI+GLA + + +++ +L
Sbjct: 283 KKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQL 342

Query: 207 FSKMETR----NDVSWNSMISGFVRNGKWSEALDLFSTMQ-KEKIKPSEFTLVSLLNACG 43
           FS +++     +DVS+ ++++     G   +A D F  M+ K KIKP       +++  G
Sbjct: 343 FSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLG 402

Query: 42  HLGALEE 22
             G LEE
Sbjct: 403 RAGLLEE 409


>gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  335 bits (860), Expect = 1e-89
 Identities = 173/280 (61%), Positives = 211/280 (75%), Gaps = 2/280 (0%)
 Frame = -2

Query: 834 PCVCSSNPPSTS--ISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           P +CS+ PPS+S  I+ FISD P L ML+ +C+ M DL+KIH  +IKTGL  D IA+SRV
Sbjct: 2   PILCSALPPSSSPSIANFISDHPCLTMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRV 61

Query: 660 LAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQ 481
           L F A S  GDINYA LVF+ I NPNL+ WN IIRGFS SSTP +AI LF++ML  S ++
Sbjct: 62  LTFCASSS-GDINYAYLVFTGIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLY-SAVE 119

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           P  LTYPSVFKAYA+ G    GAQLHGR++KLGLE D FI NT+L+MYA  G + EAR++
Sbjct: 120 PQRLTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRV 179

Query: 300 FDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEAL 121
           FDE    DVVA NSMIMGLAK  E+D S RLF  M TR  VSWNSMISG+VRNG+ +E L
Sbjct: 180 FDEPLELDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGL 239

Query: 120 DLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           +LF  MQ+E ++PSEFT+VSLL+AC HLGAL+ G W++ Y
Sbjct: 240 ELFRKMQEEGVEPSEFTMVSLLSACAHLGALQHGEWVHDY 279



 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
 Frame = -2

Query: 732 DLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPI--------------------------- 634
           D  ++H +++K GL KD+  S+ +L   A S +                           
Sbjct: 140 DGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLA 199

Query: 633 --GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYP 460
             G+++ +  +F ++      +WN +I G+  +      + LF +M     ++P   T  
Sbjct: 200 KCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFRKMQEEG-VEPSEFTMV 258

Query: 459 SVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVE 280
           S+  A A  G  +HG  +H  I +   +L+  +   ++ MY  CG + +A ++F      
Sbjct: 259 SLLSACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAASPTR 318

Query: 279 DVVAWNSMIMGLAKSEEIDDSWRLFSKMETRN----DVSWNSMISGFVRNGKWSEALDLF 112
            +  WNS+I+GLA +    ++   FSK+E+ N     VS+  +++     G   EA D F
Sbjct: 319 GLPCWNSIIIGLALNGHEREAIEYFSKLESSNIKPDCVSFIGVLTACKYLGAVREARDYF 378

Query: 111 S-TMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           +  M K +I+PS      L+   GH   LEE   + K
Sbjct: 379 ALMMDKYEIEPSIKHYTCLVEVLGHAALLEEAEEVIK 415


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856190|gb|EEE93737.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 509

 Score =  332 bits (852), Expect = 1e-88
 Identities = 173/255 (67%), Positives = 201/255 (78%), Gaps = 1/255 (0%)
 Frame = -2

Query: 762 MLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPIGDINYANLVFSHIENPN 583
           ML+  C++M DL+KIHAQLIKTGL KD IA+SRVLAF   SP GDINYA LVF+ I NPN
Sbjct: 1   MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCT-SPAGDINYAYLVFTQIRNPN 59

Query: 582 LFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEI-QPHLLTYPSVFKAYARRGLAKHGAQL 406
           LF WN IIRGFS+SSTP  AI LFI+M+ TS   QP  LTYPSVFKAYA+ GLA  GAQL
Sbjct: 60  LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119

Query: 405 HGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEI 226
           HGR+IKLGLE D FI+NT+L+MY  CGFL EA+++FD     DVV WN+MI+GLAK  EI
Sbjct: 120 HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179

Query: 225 DDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLFSTMQKEKIKPSEFTLVSLLNAC 46
           D S RLF KM  RN VSWNSMISG+VR G++ EA++LFS MQ+E IKPSEFT+VSLLNAC
Sbjct: 180 DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239

Query: 45  GHLGALEEGNWIYKY 1
             LGAL +G WI+ Y
Sbjct: 240 ACLGALRQGEWIHDY 254



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G+I+ +  +F  +   N  +WN +I G+        A+ LF  M     I+P   T  S+
Sbjct: 177 GEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEG-IKPSEFTMVSL 235

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A  G  + G  +H  I+K    L++ +   ++ MY+ CG + +A ++F     + +
Sbjct: 236 LNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGL 295

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETRN----DVSWNSMISGFVRNGKWSEALDLFST 106
             WNS+I+GLA S   +++ RLFSK+E+ N     VS+  +++     G    A D F  
Sbjct: 296 SCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLL 355

Query: 105 MQKE-KIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           M +  KI+PS      +++  G  G LEE   + K
Sbjct: 356 MSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIK 390


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  327 bits (839), Expect = 3e-87
 Identities = 160/277 (57%), Positives = 215/277 (77%)
 Frame = -2

Query: 831 CVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAF 652
           C   S  P ++    IS+QPYL M++  C+TM DL++ HA LIK+G   +  A+SR+LAF
Sbjct: 6   CGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAF 65

Query: 651 SAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHL 472
            A SP+G+++YA LVF  ++NPNLF+WN +IRGFS+SS P  A++LFI+ML +S+++P  
Sbjct: 66  CA-SPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQR 124

Query: 471 LTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDE 292
           LTYPS+FKAY++ GLA  GAQLHGRIIKLGL+ D FIRNT+L+MYA  GFL EAR++F++
Sbjct: 125 LTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQ 184

Query: 291 DEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLF 112
           +   DVV+WNSMI+GLAK  EID+S +LF KM  +N +SWNSMI G+VRNG + EAL LF
Sbjct: 185 EMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLF 244

Query: 111 STMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
             MQ+E+I+PSEFT+VSLLNA   +GAL +G WI++Y
Sbjct: 245 IKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEY 281



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 54/205 (26%), Positives = 92/205 (44%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G+I+ +  +F  +   N  +WN +I G+  +     A+ LFI+M     IQP   T  S+
Sbjct: 204 GEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKM-QEERIQPSEFTMVSL 262

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A+ G  + G  +H  I K  L+L+  +   ++ MY  CG +  A ++F++     +
Sbjct: 263 LNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSL 322

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLFSTMQKE 94
            +WNSMI GLA                                NG   EA+ +F  ++  
Sbjct: 323 SSWNSMIFGLAV-------------------------------NGCEKEAILVFKMLESS 351

Query: 93  KIKPSEFTLVSLLNACGHLGALEEG 19
            +KP   + +++L AC H   ++EG
Sbjct: 352 SLKPDCISFMAVLTACNHGAMVDEG 376


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  327 bits (839), Expect = 3e-87
 Identities = 171/280 (61%), Positives = 211/280 (75%), Gaps = 4/280 (1%)
 Frame = -2

Query: 828 VCSSNPPSTS----ISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRV 661
           +CS+ PPS+S    I+KFISDQP L ML+T+C+ M DL+KIHA +IKTGL    +A+SRV
Sbjct: 4   LCSALPPSSSSSPSIAKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRV 63

Query: 660 LAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQ 481
           L F A S  GDINYA L+F+ I +PNL+ WN IIRGFS SSTP  AI LF++ML  S + 
Sbjct: 64  LTFCASSS-GDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDML-CSSVL 121

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           P  LTYPSVFKAYA+ G    GAQLHGR++KLGLE D FI+NT+++MYA  G L EAR++
Sbjct: 122 PQRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRV 181

Query: 300 FDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEAL 121
           FDE    DVVA NSMIMGLAK  E+D S RLF  M TR  V+WNSMISG+VRN +  EAL
Sbjct: 182 FDELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEAL 241

Query: 120 DLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           +LF  MQ E+++PSEFT+VSLL+AC HLGAL+ G W++ Y
Sbjct: 242 ELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHDY 281



 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
 Frame = -2

Query: 732 DLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPI--------------------------- 634
           D  ++H +++K GL KD+   + ++   A S +                           
Sbjct: 142 DGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLA 201

Query: 633 --GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYP 460
             G+++ +  +F ++      TWN +I G+  +   + A+ LF +M     ++P   T  
Sbjct: 202 KCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQG-ERVEPSEFTMV 260

Query: 459 SVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVE 280
           S+  A A  G  KHG  +H  + +   EL+  +   ++ MY  CG +V+A ++F+     
Sbjct: 261 SLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTR 320

Query: 279 DVVAWNSMIMGLAKSEEIDDSWRLFSKMETR----NDVSWNSMISGFVRNGKWSEALDLF 112
            +  WNS+I+GLA +     +   FSK+E      + VS+  +++     G   +A D F
Sbjct: 321 GLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYF 380

Query: 111 S-TMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           S  M K +I+PS      ++   G    LEE   + K
Sbjct: 381 SLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIK 417


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  316 bits (809), Expect = 1e-83
 Identities = 164/284 (57%), Positives = 211/284 (74%), Gaps = 4/284 (1%)
 Frame = -2

Query: 840 MPPC--VCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASS 667
           + PC     S PP  SISKFISDQP L ML+  C+T+     I+  +IKTGL  + IAS+
Sbjct: 2   LTPCSLFSQSPPPPPSISKFISDQPCLTMLQNHCTTLKHFHMIYPHIIKTGLTHNPIAST 61

Query: 666 RVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSE 487
           RVL F A SP G+INYA  +F+ + NPNL++WN IIR FS SSTP +AI LF++ML  S+
Sbjct: 62  RVLTFCA-SPSGNINYAYKLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLY-SQ 119

Query: 486 IQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEAR 307
           IQP  LTYPSVFKAYA+     +G+QLHG ++KLGL+ D FI NT+++MYA  G L EA+
Sbjct: 120 IQPQHLTYPSVFKAYAQLSAGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAK 179

Query: 306 KLFDED-EVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWS 130
           ++FDE  E+ DVVA+NSMIMG AK  EID++ +LF +M TR  V+WNSMISG+VRNGK  
Sbjct: 180 RVFDEKLELGDVVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTWNSMISGYVRNGKLM 239

Query: 129 EALDLFSTMQ-KEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           EAL+LF  MQ +E+++PSEFT+VSLLNAC HLGAL+ G W++ Y
Sbjct: 240 EALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWVHDY 283



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 61/239 (25%), Positives = 108/239 (45%)
 Frame = -2

Query: 738 MTDLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIII 559
           +++ K++  + ++ G   D +A + ++   AK   G+I+ A  +F  +      TWN +I
Sbjct: 175 LSEAKRVFDEKLELG---DVVAFNSMIMGFAKC--GEIDEARKLFDEMFTRTSVTWNSMI 229

Query: 558 RGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGL 379
            G+  +   + A+ LF +M     ++P   T  S+  A A  G  +HG  +H  I +   
Sbjct: 230 SGYVRNGKLMEALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWVHDYIKRNDF 289

Query: 378 ELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSK 199
           EL+  +   ++ MY  CG +  A ++FD      +  WNS+I+GLA              
Sbjct: 290 ELNVIVLTAIIDMYCKCGSVENAIQVFDTYPGRGLSCWNSIIIGLA-------------- 335

Query: 198 METRNDVSWNSMISGFVRNGKWSEALDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEE 22
                             NG   EA + FS ++  K KP   + + +L AC HLGA+++
Sbjct: 336 -----------------MNGHEREAFEFFSELELSKFKPDSVSFIGVLTACKHLGAVDK 377


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325851|gb|EFH56271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 542

 Score =  315 bits (808), Expect = 1e-83
 Identities = 165/278 (59%), Positives = 201/278 (72%), Gaps = 1/278 (0%)
 Frame = -2

Query: 831 CVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAF 652
           C      P+   S F+S    L +++T+CSTM +LK+IHA LIKTGLI D +A+SRVLAF
Sbjct: 7   CFSGVTVPAIPSSGFVSGNTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAF 66

Query: 651 SAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTS-EIQPH 475
              SP  D NYA LVF+ I + N F WN IIRGFS SS P  AI +FI+ML +S  ++P 
Sbjct: 67  CCASP-SDRNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQ 125

Query: 474 LLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFD 295
            LTYPSVFKAYA  GLA+ G QLHGR+IK GLE D+FIRNTMLHMY  CG LVEA +LF 
Sbjct: 126 RLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFV 185

Query: 294 EDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDL 115
                DVVAWNS+IMGLAK   ID + +LF +M  RN VSWNSMISGFVRNG++ +AL++
Sbjct: 186 GMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEM 245

Query: 114 FSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           F  MQ+  +KP  FT+VSLLNAC +LGA E+G WI+KY
Sbjct: 246 FREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKY 283



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
 Frame = -2

Query: 684 DKIASSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIE 505
           D +A + ++   AK   G I+ A  +F  +   N  +WN +I GF  +     A+ +F E
Sbjct: 191 DVVAWNSIIMGLAKC--GLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFRE 248

Query: 504 MLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCG 325
           M    +++P   T  S+  A A  G ++ G  +H  I++   EL++ +   ++ MY  CG
Sbjct: 249 M-QERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCG 307

Query: 324 FLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETR----NDVSWNSMIS 157
              E  K+F+    + +  WNSMI+GLA +   + +  LF ++E      + VS+  +++
Sbjct: 308 CFEEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLT 367

Query: 156 GFVRNGKWSEALDLFSTM-QKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
               +G+  +A + F  M +K  I+PS      ++N  G  G L+E   + K
Sbjct: 368 ACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIK 419


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  308 bits (788), Expect = 3e-81
 Identities = 159/271 (58%), Positives = 197/271 (72%), Gaps = 1/271 (0%)
 Frame = -2

Query: 810 PSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPIG 631
           P+   S  +S   YL +++T+CSTM +LK+IHA LIKTGLI D + +SRVLAF   SP  
Sbjct: 14  PAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASP-S 72

Query: 630 DINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTS-EIQPHLLTYPSV 454
           D+NYA LVF+ I + N F WN IIRGFS SS P  AI +FI+ML +S  ++P  LTYPSV
Sbjct: 73  DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
           FKAY R G A+ G QLHG +IK GLE D+FIRNTMLHMY  CG L+EA ++F      DV
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLFSTMQKE 94
           VAWNSMIMG AK   ID +  LF +M  RN VSWNSMISGFVRNG++ +ALD+F  MQ++
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252

Query: 93  KIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
            +KP  FT+VSLLNAC +LGA E+G WI++Y
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
 Frame = -2

Query: 768 LHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAFSAKSPIGDINYANLVFSHIEN 589
           LHM  T C  + +  +I   +I   ++     +S ++ F+     G I+ A  +F  +  
Sbjct: 168 LHMYVT-CGCLIEAWRIFLGMIGFDVVA---WNSMIMGFAK---CGLIDQAQNLFDEMPQ 220

Query: 588 PNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQ 409
            N  +WN +I GF  +     A+ +F EM    +++P   T  S+  A A  G ++ G  
Sbjct: 221 RNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMVSLLNACAYLGASEQGRW 279

Query: 408 LHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDVVAWNSMIMGLAKSEE 229
           +H  I++   EL++ +   ++ MY  CG + E   +F+    + +  WNSMI+GLA +  
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF 339

Query: 228 IDDSWRLFSKMETR----NDVSWNSMISGFVRNGKWSEALDLFSTM-QKEKIKPSEFTLV 64
            + +  LFS++E      + VS+  +++    +G+   A + F  M +K  I+PS     
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399

Query: 63  SLLNACGHLGALEEGNWIYK 4
            ++N  G  G LEE   + K
Sbjct: 400 LMVNVLGGAGLLEEAEALIK 419


>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
           gi|557112734|gb|ESQ53018.1| hypothetical protein
           EUTSA_v10017572mg [Eutrema salsugineum]
          Length = 546

 Score =  304 bits (779), Expect = 3e-80
 Identities = 151/277 (54%), Positives = 202/277 (72%)
 Frame = -2

Query: 831 CVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAF 652
           C      P+ S +  +S   ++ +++T+CSTM +LK+IHA LIKTGLI D IA+SRVLAF
Sbjct: 7   CYSGMTMPTFSSTISVSGNSHIRLIDTQCSTMRELKQIHANLIKTGLISDTIAASRVLAF 66

Query: 651 SAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHL 472
              SP  D++YA L+F+ I + N F WN IIRGFS SS P  +I +FI+M +++  +P  
Sbjct: 67  CCTSP-SDMSYAYLLFTRINHKNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQR 125

Query: 471 LTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDE 292
           LTYPSVFKAYA  G A+ G QLHG +IK GLE D+FIRNTMLHMYA CG  VEA ++F  
Sbjct: 126 LTYPSVFKAYASLGKARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMA 185

Query: 291 DEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEALDLF 112
            +  DVVAWNSM+MGLA+   I+ + +LF +M  RN++SWNSMISGFV+NG++ +AL++F
Sbjct: 186 MKHFDVVAWNSMMMGLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMF 245

Query: 111 STMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
             MQ+  +KP  FT+VSLLNAC +LGA E+G WI++Y
Sbjct: 246 RKMQERNVKPDGFTMVSLLNACAYLGASEQGRWIHEY 282



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G I  A  +F  +   N  +WN +I GF ++     A+ +F +M   + ++P   T  S+
Sbjct: 205 GLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFRKMQERN-VKPDGFTMVSL 263

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A  G ++ G  +H  I+K   EL++ +   ++ MY  CG + E  ++F+    + +
Sbjct: 264 LNACAYLGASEQGRWIHEYIVKNRFELNSIVITALIDMYCKCGCIEEGLRVFESAPNKQL 323

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKMETR----NDVSWNSMISGFVRNGKWSEALDLFST 106
             WNSM++GLA +   + +  LFS++E+     + VS+  +++    +GK  EA + F  
Sbjct: 324 SCWNSMVLGLANNGYEERAMDLFSELESSDLEPDSVSFIGVLTACAYSGKVDEAGEFFRL 383

Query: 105 M-QKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           M +K  I+PS      ++N  G  G LEE   + K
Sbjct: 384 MREKYLIEPSIKHYTCMVNVLGGAGLLEEAEAMIK 418


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  304 bits (779), Expect = 3e-80
 Identities = 163/281 (58%), Positives = 204/281 (72%), Gaps = 7/281 (2%)
 Frame = -2

Query: 822 SSNPPST---SISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVLAF 652
           S +PP     SISKFIS+ P L ML+  C+T+    +I+  +IKTGL  + IAS+R L F
Sbjct: 10  SQSPPPQQPPSISKFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTF 69

Query: 651 SAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHL 472
            A SP G+INYA  +F  + NPNL++WN IIR FS SSTP +AI LF++ML  S+IQP  
Sbjct: 70  CA-SPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLY-SQIQPQY 127

Query: 471 LTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDE 292
           LTYPSVFKAYA+ G A +GAQLHGR++KLGL+ D FI NT+++MYA  G + EAR++FD 
Sbjct: 128 LTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDG 187

Query: 291 DEVE----DVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEA 124
            ++E    DVVA NSMIMG AK  EID+S  LF  M TR  VSWNSMISG+VRNGK  EA
Sbjct: 188 KKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEA 247

Query: 123 LDLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           L+LF+ MQ E  + SEFT+VSLLNAC HLGAL+ G W++ Y
Sbjct: 248 LELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDY 288



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 6/233 (2%)
 Frame = -2

Query: 684 DKIASSRVLAFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIE 505
           D +A + ++   AK   G+I+ +  +F  +      +WN +I G+  +   + A+ LF +
Sbjct: 196 DVVAINSMIMGYAKC--GEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNK 253

Query: 504 MLNTSEIQPHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCG 325
           M      +    T  S+  A A  G  +HG  +H  I +   EL+  +   ++ MY  CG
Sbjct: 254 M-QVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCG 312

Query: 324 FLVEARKLFDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETR-----NDVSWNSMI 160
            +  A ++F+      +  WNS+I+GLA +    +++  FSK+E+      + VS+  ++
Sbjct: 313 SVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVL 372

Query: 159 SGFVRNGKWSEALDLFS-TMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           +     G  ++A D F   M K +I+PS      +++  G  G LEE   + K
Sbjct: 373 TACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIK 425


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
           gi|565472276|ref|XP_006293940.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562647|gb|EOA26837.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562648|gb|EOA26838.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  302 bits (773), Expect = 1e-79
 Identities = 159/280 (56%), Positives = 201/280 (71%), Gaps = 1/280 (0%)
 Frame = -2

Query: 837 PPCVCSSNPPSTSISKFISDQPYLHMLETKCSTMTDLKKIHAQLIKTGLIKDKIASSRVL 658
           P  +C S     +++ F S   YL +++T+CSTM +LK+IH  LIKTGLI D +A+SRVL
Sbjct: 3   PTILCYSG---VTVAAFPSPASYLRLIDTQCSTMRELKQIHGNLIKTGLISDTVAASRVL 59

Query: 657 AFSAKSPIGDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTS-EIQ 481
           AF   SP  D+NYA LVF+ I + N F WN IIRGFS+SS P  AI +FI+ML +S  ++
Sbjct: 60  AFCCASP-SDMNYAYLVFTRINHKNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVK 118

Query: 480 PHLLTYPSVFKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKL 301
           P  LTYPSVFKAY R G A  G QLHGR++K GLE D+FIRNTML MY   G LVEA ++
Sbjct: 119 PQNLTYPSVFKAYGRLGQAIDGRQLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRI 178

Query: 300 FDEDEVEDVVAWNSMIMGLAKSEEIDDSWRLFSKMETRNDVSWNSMISGFVRNGKWSEAL 121
           F      DVVAWNSMIMGLAK   I  + +LF +M  RN+VSWNSMISGFVRNG++ +AL
Sbjct: 179 FVGMTDFDVVAWNSMIMGLAKCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDAL 238

Query: 120 DLFSTMQKEKIKPSEFTLVSLLNACGHLGALEEGNWIYKY 1
           ++F  MQ+  +KP  FT+VSLLNAC +LGA E+G WI++Y
Sbjct: 239 EMFREMQERNVKPDGFTMVSLLNACAYLGANEQGRWIHEY 278



 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
 Frame = -2

Query: 633 GDINYANLVFSHIENPNLFTWNIIIRGFSESSTPLYAIHLFIEMLNTSEIQPHLLTYPSV 454
           G I+ A  +F  + + N  +WN +I GF  +     A+ +F EM   + ++P   T  S+
Sbjct: 201 GLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREMQERN-VKPDGFTMVSL 259

Query: 453 FKAYARRGLAKHGAQLHGRIIKLGLELDTFIRNTMLHMYAGCGFLVEARKLFDEDEVEDV 274
             A A  G  + G  +H  I +   EL++ +   ++ MY  CG + E  K+F+    + +
Sbjct: 260 LNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCGCIEEGLKVFECAPKKQL 319

Query: 273 VAWNSMIMGLAKSEEIDDSWRLFSKME----TRNDVSWNSMISGFVRNGKWSEALDLFST 106
             WNSMI+GLA +   + +  LF ++E      + VS+  +++    +G+  +A   F  
Sbjct: 320 SCWNSMILGLANNGCEERAMDLFLELERFGLEPDSVSFIGVLTACAYSGEVHKAGGFFRL 379

Query: 105 M-QKEKIKPSEFTLVSLLNACGHLGALEEGNWIYK 4
           M +K  ++PS      ++N  G  G L+E   + K
Sbjct: 380 MREKYMVEPSIKHYTCMVNVLGGAGLLDEAESLIK 414