BLASTX nr result
ID: Atropa21_contig00021565
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021565
(799 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 94 7e-17
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 94 7e-17
ref|XP_006341306.1| PREDICTED: uncharacterized protein LOC102594... 93 1e-16
gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida] 92 2e-16
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] 83 1e-13
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 80 6e-13
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum] 80 8e-13
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 79 2e-12
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 78 4e-12
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 76 1e-11
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772... 76 1e-11
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 76 2e-11
ref|XP_006383492.1| hypothetical protein POPTR_0005s16705g [Popu... 76 2e-11
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752... 76 2e-11
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 76 2e-11
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 76 2e-11
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 76 2e-11
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 76 2e-11
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 75 2e-11
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 75 2e-11
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 93.6 bits (231), Expect = 7e-17
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
+I F +G Y D++LCDVVPMQA H+LLGRPWQ+D+ T H GR NRYSL+ +G KY L +
Sbjct: 484 MISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKYTLAPL 543
Query: 618 THLQDSEIYRRMKEVREMSKGKNK 547
+ Q E +R++E KG+ K
Sbjct: 544 SPSQVFEDQKRLRETMGKQKGEVK 567
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 93.6 bits (231), Expect = 7e-17
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
+I F +G Y D++LCDVVPMQA H+LLGRPWQ+D+ T H GR NRYSL+ +G KY L +
Sbjct: 484 MISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKYTLAPL 543
Query: 618 THLQDSEIYRRMKEVREMSKGKNK 547
+ Q E +R++E KG+ K
Sbjct: 544 SPSQVFEDQKRLRETMGKQKGEVK 567
>ref|XP_006341306.1| PREDICTED: uncharacterized protein LOC102594621 [Solanum tuberosum]
Length = 631
Score = 92.8 bits (229), Expect = 1e-16
Identities = 45/90 (50%), Positives = 61/90 (67%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I+F +G Y+++++CDVVPM A H+LLGRPWQ + H GRSN+Y+ V +G KYVL +T
Sbjct: 509 IQFSVGKYNEELVCDVVPMLAYHLLLGRPWQFGRDIMHQGRSNKYTFVIEGKKYVLAPLT 568
Query: 615 HLQDSEIYRRMKEVREMSKGKNKCSDQEES 526
Q SE YR MKE+RE K + + E S
Sbjct: 569 PYQVSEDYRAMKELRERVKTEEAKGEGESS 598
>gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida]
Length = 803
Score = 92.4 bits (228), Expect = 2e-16
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
+IKFK+G Y D+ L DVVPMQA H+L GRPWQ D+ H+GR N Y+L +G K+VL +
Sbjct: 529 MIKFKMGSYVDEHLFDVVPMQACHLLFGRPWQFDRQVVHNGRVNNYTLQHEGRKFVLKPL 588
Query: 618 THLQDSEIYRRMKEVREMSKGKN 550
T Q S+ Y RMKE+RE +K K+
Sbjct: 589 TPKQVSDDYNRMKELREAAKAKS 611
>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
Length = 818
Score = 83.2 bits (204), Expect = 1e-13
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
L+ F IG Y D+VLCD+VPM A HILLGRPWQ D+ HDG NRYS +++ L +
Sbjct: 477 LVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFIKNNKTITLVPL 536
Query: 618 THLQDSEIYRRMKEVREMSKGKNKCSDQEESN 523
T Q E + +++ GKN+ +++ +
Sbjct: 537 TPRQKKESENXKESEKKIESGKNERKTKKQGS 568
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 80.5 bits (197), Expect = 6e-13
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
LI IG Y D VLCDV+PM A HILLGRPWQ+D+ T H G++N+Y++ + G KY L
Sbjct: 466 LISISIGKYQDDVLCDVIPMHACHILLGRPWQYDRDTLHHGKTNKYTIHKGGKKYTL--- 522
Query: 618 THLQDSEIYR---RMKEVREMSKGKNKCSDQEESN 523
T L E+Y + K++RE K K + +E ++
Sbjct: 523 TPLAPKEVYNLQVQSKKLREELAQKAKEAMKETTS 557
>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 572
Score = 80.1 bits (196), Expect = 8e-13
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I FKIG Y D VLCDVVPM+A H+LLGRPWQ D+ HDG SN+YS + K L +
Sbjct: 428 ICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLN 487
Query: 615 HLQDSEIYRRMKEV-----REMSKGKNKCSDQEE 529
+ E R+M+E +E K K K ++E+
Sbjct: 488 PSEVREDQRKMREKYDQERKEKEKEKEKEKEKEK 521
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 79.0 bits (193), Expect = 2e-12
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I FKIG Y D VLCDVVPM+A H+LLGRPWQ D+ HDG SN+YS + K L +
Sbjct: 428 ICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLN 487
Query: 615 HLQDSEIYRRMKE---------VREMSKGKNKCSDQEE 529
+ E R+M E +E K + K +D+ E
Sbjct: 488 PSEVREDQRKMSEKYDQERKEKEKEKEKNEKKKNDKRE 525
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 77.8 bits (190), Expect = 4e-12
Identities = 36/67 (53%), Positives = 43/67 (64%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
L+ F IG Y D+VLCD+VPM A HILLGRPWQ D+ HDG NRYS +D L +
Sbjct: 455 LVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFXKDNKTITLVPL 514
Query: 618 THLQDSE 598
T Q+ E
Sbjct: 515 TPRQEYE 521
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 76.3 bits (186), Expect = 1e-11
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = -2
Query: 798 LIKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLM 619
L+ F IG Y D VLCDVVPM A HILLGRPWQ+D+ HDG NRYS V + K L +
Sbjct: 294 LVSFSIGRYKDDVLCDVVPMHAGHILLGRPWQYDRRVTHDGYLNRYSFVINKRKITLVPL 353
Query: 618 THLQDSEIYRRMKEVRE 568
T Q E + E +E
Sbjct: 354 TPRQVYEDQINIVERKE 370
>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
Length = 1246
Score = 76.3 bits (186), Expect = 1e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
+ F IGDYH +V CD+VPMQA H+LLGRPWQ D + H GRSN+Y+ + + K VL ++
Sbjct: 473 LSFSIGDYHGEVDCDIVPMQACHLLLGRPWQFDVDSVHFGRSNKYTFIANDKKVVLVPLS 532
Query: 615 ----HLQD-SEIYRRMKEVREMSKGKN 550
H D + + R E R++S+ N
Sbjct: 533 PEEIHASDVARMKREESEKRKLSEAPN 559
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 75.9 bits (185), Expect = 2e-11
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
+ F IG YHD + CDVVPMQA +LLGRPWQ D+ + H G+SN+YS V +G K VL
Sbjct: 553 VHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVL---- 608
Query: 615 HLQDSEIYRRMKEVREMSKGKNK 547
H E+ + E+ SK KN+
Sbjct: 609 HPMSPEVILK-DELARASKQKNQ 630
>ref|XP_006383492.1| hypothetical protein POPTR_0005s16705g [Populus trichocarpa]
gi|550339140|gb|ERP61289.1| hypothetical protein
POPTR_0005s16705g [Populus trichocarpa]
Length = 397
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
++F IG Y+DKVLCDVVPM H+LLGR WQ D+ +HDG N+Y L +DG Y L ++
Sbjct: 241 VRFLIGKYNDKVLCDVVPMYVTHLLLGRLWQFDRKAKHDGFKNKYFLEKDGRVYTLAPLS 300
Query: 615 HLQDSEIYRRMKE 577
Q E R+K+
Sbjct: 301 PKQVYEEQMRLKK 313
>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
Length = 1295
Score = 75.9 bits (185), Expect = 2e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
+ F IGDYH +V CD+VPMQA H+LLGRPWQ D + H GRSN+Y+ + + K VL ++
Sbjct: 606 LTFSIGDYHGEVDCDIVPMQACHLLLGRPWQFDVDSVHFGRSNKYTFIANDKKVVLVPLS 665
Query: 615 ----HLQD-SEIYRRMKEVREMSKGKN 550
H D + + R E R++S+ N
Sbjct: 666 PEEIHASDVARMKREESEKRKLSEAPN 692
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 75.9 bits (185), Expect = 2e-11
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I F IG+YHD V CDVVPMQA +ILLGRPWQ D+ + H GRSN+YS + K VL+ M+
Sbjct: 900 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 959
Query: 615 HLQDSEIYRRMKEVREMSKGKNKCSDQEESN 523
+I R +V + +K K + + +S+
Sbjct: 960 ---SEDILR--DDVAKAAKSKCESDKKAQSD 985
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I F IG+YHD V CDVVPMQA +ILLGRPWQ D+ + H GRSN+YS + K VL+ M+
Sbjct: 542 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHSMS 601
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 75.9 bits (185), Expect = 2e-11
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I F IG+YHD V CDVVPMQA +ILLGRPWQ D+ + H GRSN+YS + K VL+ M+
Sbjct: 909 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 968
Query: 615 HLQDSEIYRRMKEVREMSKGKNKCSDQEESN 523
+I R +V + +K K + + +S+
Sbjct: 969 ---SEDILR--DDVAKAAKSKCESDKKAQSD 994
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 75.9 bits (185), Expect = 2e-11
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
+ F IG YHD + CDVVPMQA +LLGRPWQ D+ + H G+SN+YS V +G K VL
Sbjct: 553 VHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVL---- 608
Query: 615 HLQDSEIYRRMKEVREMSKGKNK 547
H E+ + E+ SK KN+
Sbjct: 609 HPMSPEVILK-DELARASKQKNQ 630
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 75.5 bits (184), Expect = 2e-11
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
I F IG+YHD V CDVVPMQA +ILLGRPWQ D+ + H GRSN+YS + K VL+ M+
Sbjct: 483 INFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 542
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 75.5 bits (184), Expect = 2e-11
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = -2
Query: 795 IKFKIGDYHDKVLCDVVPMQARHILLGRPWQHDQATRHDGRSNRYSLVQDGCKYVLYLMT 616
+ F IG YHD + CDVVPMQA I LGRPWQ D+ + H G+SN+YS V +G K VL
Sbjct: 553 VHFAIGSYHDSINCDVVPMQACSIFLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVL---- 608
Query: 615 HLQDSEIYRRMKEVREMSKGKNK 547
H E+ + E+ SK KN+
Sbjct: 609 HPMSPEVILK-DELARASKQKNQ 630