BLASTX nr result

ID: Atropa21_contig00021107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00021107
         (756 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342757.1| PREDICTED: zinc finger CCCH domain-containin...    64   5e-08
ref|XP_004229205.1| PREDICTED: zinc finger CCCH domain-containin...    60   8e-07

>ref|XP_006342757.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Solanum tuberosum]
          Length = 492

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 34/53 (64%), Positives = 37/53 (69%)
 Frame = -2

Query: 755 PYPVGSSVGMLAPLSSSSDLRPELISESGRDAFSTQIXXXXXXXXXXXXMFSK 597
           PYPVGS+VG LAP SSSSDLRPE+IS SGRD FSTQ+            MFSK
Sbjct: 404 PYPVGSAVGTLAPSSSSSDLRPEVISGSGRDGFSTQVSSMNTSSGSVGSMFSK 456


>ref|XP_004229205.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Solanum lycopersicum]
          Length = 496

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = -2

Query: 755 PYPVGSSVGMLAPLSSSSDLRPELISESGRDAFSTQIXXXXXXXXXXXXMFSK 597
           PYPVGS+VG LAP SSSSDLRPE+ + SGRD FSTQ+            MFSK
Sbjct: 408 PYPVGSAVGTLAPSSSSSDLRPEVNAGSGRDGFSTQVSSMNTSSGSVGSMFSK 460


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