BLASTX nr result
ID: Atropa21_contig00020191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020191
(600 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 204 2e-50
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 202 4e-50
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana... 202 4e-50
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana] 200 3e-49
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu... 199 4e-49
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 197 1e-48
gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum de... 196 4e-48
gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solan... 196 4e-48
gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solan... 196 4e-48
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 196 5e-48
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de... 192 6e-47
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan... 192 8e-47
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 190 2e-46
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu... 190 2e-46
gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Sola... 190 2e-46
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 189 4e-46
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 186 3e-45
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 184 1e-44
gb|ABZ79701.1| RNA-dependent RNA polymerase [Solanum lycopersicum] 169 5e-40
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro... 144 2e-32
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 204 bits (518), Expect = 2e-50
Identities = 102/126 (80%), Positives = 114/126 (90%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFPYL+SAEAVK FLE +TGNGTVYALEVKQSKGG RAFA VQFAN++SA+
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
II+LAS+ LY+G SYLKAWEMKTDIVQPRTYV+ MDG+TLNFGCQISD KFAVLG S+ V
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTDIVQPRTYVEHMDGVTLNFGCQISDKKFAVLG-SKDV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 202 bits (515), Expect = 4e-50
Identities = 103/126 (81%), Positives = 115/126 (91%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFPYL+SAEAVK+FLE +TGNGTVYALEVKQSKGG RAFA VQFAN++SA+I
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEI 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
II+LAS+ LY+G SYLKAWEMKT IVQPRTYVQ MDG+TLNFGCQISD KFAVLG S+ V
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTYIVQPRTYVQHMDGVTLNFGCQISDKKFAVLG-SKVV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
Length = 1044
Score = 202 bits (515), Expect = 4e-50
Identities = 101/126 (80%), Positives = 115/126 (91%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFPYL+SAEAVK+FLE +TGNGTVYALEVKQSKGG RAFA VQFAN++SA++
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEL 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
I++LAS LY+G SYL+AWEMKTDIVQPRTYVQ MDG+TLNFGCQISD KFAVLG S+ V
Sbjct: 61 IMDLASEGLYYGPSYLQAWEMKTDIVQPRTYVQHMDGVTLNFGCQISDKKFAVLG-SKDV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
Length = 479
Score = 200 bits (508), Expect = 3e-49
Identities = 100/126 (79%), Positives = 114/126 (90%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFPYL+SAEAVK+FLE +TGNGTVYALEVKQSKGG R+FA VQFA+++SA++
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRSFARVQFASNKSAEL 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
II+LAS LY+G SYLKAWEM TDIVQPRTYVQ MDG+TLNFGCQISD KFAVLG S+ V
Sbjct: 61 IIDLASMGLYYGPSYLKAWEMNTDIVQPRTYVQHMDGVTLNFGCQISDKKFAVLG-SKDV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 841
Score = 199 bits (507), Expect = 4e-49
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQVYGFPYL+SAE VKSFLEK+TG GTV ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVYGFPYLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWEMKTDIVQ R YV MDGITLNFGCQISDDKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAWEMKTDIVQLRAYVDHMDGITLNFGCQISDDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 197 bits (502), Expect = 1e-48
Identities = 103/126 (81%), Positives = 112/126 (88%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFPYL+SAE VKSFLEKYTG GTV ALEVKQSKGG RAFA VQFA++ SAD
Sbjct: 1 MGKTIQVFGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
II LA+ +LYFGSSYLKAWEMKTDIVQ R YV QMDGITLNFGCQISDDKFAVLGS+ +V
Sbjct: 61 IITLANNRLYFGSSYLKAWEMKTDIVQLRAYVDQMDGITLNFGCQISDDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SI+FGI
Sbjct: 120 SIQFGI 125
>gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 241
Score = 196 bits (498), Expect = 4e-48
Identities = 104/133 (78%), Positives = 115/133 (86%)
Frame = +1
Query: 202 LRVKFGYMAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFA 381
L ++FGYM KTIQVYGFP L+ AE VKSFLEK+TG GTV AL+VKQSKGG RAFA VQF
Sbjct: 59 LHLEFGYMGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFV 118
Query: 382 NSRSADIIINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAV 561
++ SAD IINLAS++LYFGSSYLKAWEMKTDIVQ YV MDGITLNFGCQISDDKFAV
Sbjct: 119 DNISADKIINLASKRLYFGSSYLKAWEMKTDIVQV-AYVDHMDGITLNFGCQISDDKFAV 177
Query: 562 LGSSRQVSIKFGI 600
LGS+ +VSIKFGI
Sbjct: 178 LGST-EVSIKFGI 189
>gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solanum tuberosum]
Length = 274
Score = 196 bits (498), Expect = 4e-48
Identities = 104/133 (78%), Positives = 115/133 (86%)
Frame = +1
Query: 202 LRVKFGYMAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFA 381
L ++FGYM KTIQVYGFP L+ AE VKSFLEK+TG GTV AL+VKQSKGG RAFA VQF
Sbjct: 79 LHLEFGYMGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFV 138
Query: 382 NSRSADIIINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAV 561
++ SAD IINLAS++LYFGSSYLKAWEMKTDIVQ YV MDGITLNFGCQISDDKFAV
Sbjct: 139 DNISADKIINLASKRLYFGSSYLKAWEMKTDIVQV-AYVDHMDGITLNFGCQISDDKFAV 197
Query: 562 LGSSRQVSIKFGI 600
LGS+ +VSIKFGI
Sbjct: 198 LGST-EVSIKFGI 209
>gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solanum demissum]
Length = 215
Score = 196 bits (498), Expect = 4e-48
Identities = 104/133 (78%), Positives = 115/133 (86%)
Frame = +1
Query: 202 LRVKFGYMAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFA 381
L ++FGYM KTIQVYGFP L+ AE VKSFLEK+TG GTV AL+VKQSKGG RAFA VQF
Sbjct: 20 LHLEFGYMGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFV 79
Query: 382 NSRSADIIINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAV 561
++ SAD IINLAS++LYFGSSYLKAWEMKTDIVQ YV MDGITLNFGCQISDDKFAV
Sbjct: 80 DNISADKIINLASKRLYFGSSYLKAWEMKTDIVQV-AYVDHMDGITLNFGCQISDDKFAV 138
Query: 562 LGSSRQVSIKFGI 600
LGS+ +VSIKFGI
Sbjct: 139 LGST-EVSIKFGI 150
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 196 bits (497), Expect = 5e-48
Identities = 103/126 (81%), Positives = 111/126 (88%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQVYGFP L+SAE VKSFLEK+TG GTV ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWEMKTDIVQ R YV MDGITLNFGCQISDDKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAWEMKTDIVQLRAYVDHMDGITLNFGCQISDDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1139
Score = 192 bits (488), Expect = 6e-47
Identities = 99/127 (77%), Positives = 108/127 (85%)
Frame = +1
Query: 202 LRVKFGYMAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFA 381
L ++FGYM KTIQVYGFP L+SAE VKSFLEK+TG GTV ALEVKQSK G RAFA VQF
Sbjct: 20 LHLEFGYMGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKRGSRAFAKVQFV 79
Query: 382 NSRSADIIINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAV 561
++ SAD IINLAS++LYFGSSYLKAWEMK DIVQ R YV MDGITLNFGCQISDDKFAV
Sbjct: 80 DNISADKIINLASKRLYFGSSYLKAWEMKADIVQLRAYVDHMDGITLNFGCQISDDKFAV 139
Query: 562 LGSSRQV 582
LGS+ V
Sbjct: 140 LGSTEVV 146
>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
Length = 1137
Score = 192 bits (487), Expect = 8e-47
Identities = 98/127 (77%), Positives = 109/127 (85%)
Frame = +1
Query: 202 LRVKFGYMAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFA 381
L ++FGYM KTIQVYGFP L+SAE VKSFLEK+TG GTV ALEVKQSKGG RAFA VQF
Sbjct: 64 LHLEFGYMGKTIQVYGFPRLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFV 123
Query: 382 NSRSADIIINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAV 561
++ SAD IINLAS++LYFGSSYLKAWE++TDIVQ YV MDGITLNFGCQISDDKFAV
Sbjct: 124 DNISADKIINLASKRLYFGSSYLKAWELETDIVQLWAYVDHMDGITLNFGCQISDDKFAV 183
Query: 562 LGSSRQV 582
LGS+ V
Sbjct: 184 LGSTEVV 190
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 190 bits (483), Expect = 2e-46
Identities = 99/126 (78%), Positives = 110/126 (87%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFP L+SAE VK FLEK+TG GT+ ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWEMKTDIVQ R YV MDGITLNFGCQIS+DKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAWEMKTDIVQLRAYVDHMDGITLNFGCQISEDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 935
Score = 190 bits (483), Expect = 2e-46
Identities = 100/126 (79%), Positives = 110/126 (87%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQVYGFP L+SAE VKSFLEK+TG GTV ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVYGFPRLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWE++TDIVQ YV MDGITLNFGCQISDDKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAWELETDIVQLWAYVDHMDGITLNFGCQISDDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Solanum demissum]
Length = 190
Score = 190 bits (483), Expect = 2e-46
Identities = 99/126 (78%), Positives = 110/126 (87%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV+GFP L+SAE VK FLEK+TG GT+ ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWEMKTDIVQ R YV MDGITLNFGCQIS+DKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAWEMKTDIVQLRAYVDHMDGITLNFGCQISEDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1180
Score = 189 bits (481), Expect = 4e-46
Identities = 97/120 (80%), Positives = 104/120 (86%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQVYGFPYL+SAE VKSFLEK+TG GTV ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVYGFPYLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWEMKTDIV R YV MDGITLNFGCQISDDKFAVLGS+ V
Sbjct: 61 IINLASKRLYFGSSYLKAWEMKTDIVHLRAYVDHMDGITLNFGCQISDDKFAVLGSTEVV 120
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 186 bits (473), Expect = 3e-45
Identities = 100/126 (79%), Positives = 109/126 (86%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQVYGFP L+ AE VKSFLEK+TG GTV AL+VKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKAWEMKTDIVQ YV MDGITLNFGCQISDDKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAWEMKTDIVQV-AYVDHMDGITLNFGCQISDDKFAVLGST-EV 118
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 119 SIKFGI 124
>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
tuberosum]
Length = 1115
Score = 184 bits (468), Expect = 1e-44
Identities = 99/126 (78%), Positives = 109/126 (86%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQVYGFP L+SAE VKSFLEK+TG GTV ALEVKQSKGG RAFA VQF ++ SAD
Sbjct: 1 MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQV 582
IINLAS++LYFGSSYLKA EM+TD+VQ YV MDGITLNFGCQISDDKFAVLGS+ +V
Sbjct: 61 IINLASKRLYFGSSYLKAREMETDLVQLWEYVDHMDGITLNFGCQISDDKFAVLGST-EV 119
Query: 583 SIKFGI 600
SIKFGI
Sbjct: 120 SIKFGI 125
>gb|ABZ79701.1| RNA-dependent RNA polymerase [Solanum lycopersicum]
Length = 163
Score = 169 bits (428), Expect = 5e-40
Identities = 90/113 (79%), Positives = 98/113 (86%)
Frame = +1
Query: 262 VSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADIIINLASRKLYFGS 441
+SAE V SFLEKYTG GT ALEVKQSKGG RAFA VQFA++ SAD II LA+ +LYFGS
Sbjct: 1 LSAEVVLSFLEKYTGYGTSCALEVKQSKGGSRAFAKVQFADNISADKIITLANNRLYFGS 60
Query: 442 SYLKAWEMKTDIVQPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQVSIKFGI 600
SYLKAWEMKTDIVQ R YV QMDGITLNFGCQISDDKFAVLGS+ +VSI+FGI
Sbjct: 61 SYLKAWEMKTDIVQLRAYVDQMDGITLNFGCQISDDKFAVLGST-EVSIQFGI 112
>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 144 bits (362), Expect = 2e-32
Identities = 72/127 (56%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = +1
Query: 223 MAKTIQVYGFPYLVSAEAVKSFLEKYTGNGTVYALEVKQSKGGPRAFAIVQFANSRSADI 402
M KTIQV FP V AE VK+FLE YTG TVYAL+++Q K G RA+AIVQF S A++
Sbjct: 1 MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAEL 60
Query: 403 IINLASRKLYFGSSYLKAWEMKTDIV-QPRTYVQQMDGITLNFGCQISDDKFAVLGSSRQ 579
II L +++LY+GSSYLKA EM+ DIV +PRT++ M+G+TL+FGCQ+S++KF VL
Sbjct: 61 IIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVD 120
Query: 580 VSIKFGI 600
V++ FG+
Sbjct: 121 VTVNFGM 127