BLASTX nr result
ID: Atropa21_contig00020021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020021
(717 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275449.1| plasminogen activator inhibitor 1 RNA-bindin... 233 5e-59
ref|XP_006362474.1| PREDICTED: plasminogen activator inhibitor 1... 232 1e-58
ref|XP_006362473.1| PREDICTED: plasminogen activator inhibitor 1... 231 1e-58
ref|XP_006362472.1| PREDICTED: plasminogen activator inhibitor 1... 230 3e-58
gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ... 198 2e-48
ref|XP_004244706.1| PREDICTED: uncharacterized protein LOC101256... 197 3e-48
ref|XP_004253373.1| PREDICTED: uncharacterized protein LOC101260... 193 5e-47
ref|XP_002531778.1| Plasminogen activator inhibitor 1 RNA-bindin... 139 7e-31
ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259... 136 8e-30
emb|CBI16673.3| unnamed protein product [Vitis vinifera] 136 8e-30
ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265... 131 2e-28
emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera] 129 1e-27
ref|XP_002303373.2| nuclear RNA-binding family protein [Populus ... 128 2e-27
gb|EMJ10488.1| hypothetical protein PRUPE_ppa007665mg [Prunus pe... 127 3e-27
ref|XP_006440205.1| hypothetical protein CICLE_v10020747mg [Citr... 127 4e-27
ref|XP_006477112.1| PREDICTED: plasminogen activator inhibitor 1... 127 5e-27
gb|EXC02062.1| hypothetical protein L484_024026 [Morus notabilis] 126 8e-27
gb|ABK94426.1| unknown [Populus trichocarpa] 122 1e-25
ref|XP_002326470.1| predicted protein [Populus trichocarpa] gi|5... 120 3e-25
gb|EOY24223.1| Hyaluronan / mRNA binding family [Theobroma cacao] 120 4e-25
>ref|NP_001275449.1| plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum
tuberosum] gi|77416977|gb|ABA81884.1| nuclear RNA
binding protein-like [Solanum tuberosum]
Length = 363
Score = 233 bits (594), Expect = 5e-59
Identities = 142/239 (59%), Positives = 150/239 (62%), Gaps = 1/239 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDDAEDPSL +A QQLK APVA A KKGPVQ P+QAVREA
Sbjct: 11 DDDAEDPSLLVAAQQLK---APVASAPAKKGPVQ----PTKPAAKLPSKPVPPSQAVREA 63
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG-FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEX 359
RSD FNQ+FA DENAFGSNNG SGRY APEDGESGKVSE
Sbjct: 64 RSDGQRGGRGGPRGGARGRGRGRGFNQDFAADENAFGSNNGSSGRYSAPEDGESGKVSER 123
Query: 358 XXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNW 179
GFNNGD+A RPR VFD+RSGTGRGNEFIKREGSGR NW
Sbjct: 124 RGGYGGSRGGFHGGRRGGFNNGDSAEGEGE-RPRRVFDRRSGTGRGNEFIKREGSGRGNW 182
Query: 178 GTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
GT AD+IAPETE PV DGEKIVEAEKQAGQEDAGDTNK+STAA E+TLEE
Sbjct: 183 GTTADDIAPETEVPVIDGEKIVEAEKQAGQEDAGDTNKESTAAEPEEKEPEEKEITLEE 241
>ref|XP_006362474.1| PREDICTED: plasminogen activator inhibitor 1 RNA-binding
protein-like isoform X2 [Solanum tuberosum]
Length = 364
Score = 232 bits (591), Expect = 1e-58
Identities = 143/240 (59%), Positives = 149/240 (62%), Gaps = 2/240 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDDAEDPSL IA QQLK APVA A KKGPVQ P+QAVREA
Sbjct: 11 DDDAEDPSLLIAAQQLK---APVASAPAKKGPVQ----PTKPAAKLPSKPVPPSQAVREA 63
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG--FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSE 362
RSD G FNQ+FA DENAFGSNNGFSGRY APE+GE GKVSE
Sbjct: 64 RSDGQRGGGRGGPRGGARGRGRGRGFNQDFAADENAFGSNNGFSGRYSAPENGEPGKVSE 123
Query: 361 XXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRN 182
GFNNGD A RPR VFD+RSGTGRGNE+IKREGSGR N
Sbjct: 124 RRGGYGGSRGGFYGGRRGGFNNGDTAEGEVE-RPRKVFDRRSGTGRGNEYIKREGSGRGN 182
Query: 181 WGTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
WGT AD+IAPETE PV DGEKIVEAEKQAGQEDAGD NKDSTAA EMTLEE
Sbjct: 183 WGTTADDIAPETEVPVIDGEKIVEAEKQAGQEDAGDNNKDSTAAEPEEKEPEEKEMTLEE 242
>ref|XP_006362473.1| PREDICTED: plasminogen activator inhibitor 1 RNA-binding
protein-like isoform X1 [Solanum tuberosum]
Length = 364
Score = 231 bits (590), Expect = 1e-58
Identities = 142/240 (59%), Positives = 149/240 (62%), Gaps = 2/240 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDDAEDPSL +A QQLK APVA A KKGPVQ P+QAVREA
Sbjct: 11 DDDAEDPSLLVAAQQLK---APVASAPAKKGPVQ----PTKPAAKLPSKPVPPSQAVREA 63
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG--FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSE 362
RSD G FNQ+FA DENAFGSNNGFSGRY APE+GE GKVSE
Sbjct: 64 RSDGQRGGGRGGPRGGARGRGRGRGFNQDFAADENAFGSNNGFSGRYSAPENGEPGKVSE 123
Query: 361 XXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRN 182
GFNNGD A RPR VFD+RSGTGRGNE+IKREGSGR N
Sbjct: 124 RRGGYGGSRGGFYGGRRGGFNNGDTAEGEVE-RPRKVFDRRSGTGRGNEYIKREGSGRGN 182
Query: 181 WGTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
WGT AD+IAPETE PV DGEKIVEAEKQAGQEDAGD NKDSTAA EMTLEE
Sbjct: 183 WGTTADDIAPETEVPVIDGEKIVEAEKQAGQEDAGDNNKDSTAAEPEEKEPEEKEMTLEE 242
>ref|XP_006362472.1| PREDICTED: plasminogen activator inhibitor 1 RNA-binding
protein-like [Solanum tuberosum]
Length = 366
Score = 230 bits (587), Expect = 3e-58
Identities = 142/240 (59%), Positives = 149/240 (62%), Gaps = 2/240 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDDAEDPSL IA QQLK VA PVA A KK Q P+QAVREA
Sbjct: 11 DDDAEDPSLLIAAQQLKHVA-PVASAPAKKAQAQ----PTKPAAKLPSKPVPPSQAVREA 65
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG--FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSE 362
R+D G FNQEF DD NAFGSNNGFSGRY APEDGESGKVSE
Sbjct: 66 RTDGQRGGGRGGPRGGARGRGRGHGFNQEFTDDGNAFGSNNGFSGRYSAPEDGESGKVSE 125
Query: 361 XXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRN 182
GFNNGDAA RPR VFD+RSGTGRGNEFIKREGSGR N
Sbjct: 126 RRGGYGGSRGGFHGGRRGGFNNGDAAEGEGE-RPRRVFDRRSGTGRGNEFIKREGSGRGN 184
Query: 181 WGTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
WGT AD+IAP TEE VNDGEKIV+AEKQ+GQEDAGDTNKDS+AA EMTLEE
Sbjct: 185 WGTTADDIAPVTEESVNDGEKIVDAEKQSGQEDAGDTNKDSSAAEPEEKEPEEKEMTLEE 244
>gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum]
Length = 299
Score = 198 bits (503), Expect = 2e-48
Identities = 107/155 (69%), Positives = 113/155 (72%)
Frame = -3
Query: 466 FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXXXXXXXXXXXXXXXXXXGFNNGDA 287
FNQE ADDENAFGSNNGFSGRYR EDGESGK+SE GFNNGDA
Sbjct: 23 FNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYGGPRGGFHGGRRGGFNNGDA 82
Query: 286 AXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWGTPADEIAPETEEPVNDGEKIVEA 107
A RPR VFD+RSGTGRGNE+IKREGSGR NWGTPAD+IA ETE PVNDGEKIVEA
Sbjct: 83 AEGEGE-RPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIVEA 141
Query: 106 EKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
EK+AGQE+A DTNKDSTAA EMTLEE
Sbjct: 142 EKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEE 176
>ref|XP_004244706.1| PREDICTED: uncharacterized protein LOC101256310, partial [Solanum
lycopersicum]
Length = 310
Score = 197 bits (501), Expect = 3e-48
Identities = 107/155 (69%), Positives = 112/155 (72%)
Frame = -3
Query: 466 FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXXXXXXXXXXXXXXXXXXGFNNGDA 287
FNQ+FA DENAFGSNNGFSGRY APE+GESGKVSE GFNNGDA
Sbjct: 35 FNQDFAADENAFGSNNGFSGRYSAPENGESGKVSERRGGYGGSRGGFYGGRRGGFNNGDA 94
Query: 286 AXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWGTPADEIAPETEEPVNDGEKIVEA 107
A RPR VFD+RSGTGRGNE+IKREGSGR NWGT AD+IAPETE PV DGEKIVEA
Sbjct: 95 ADGEIE-RPRKVFDRRSGTGRGNEYIKREGSGRGNWGTTADDIAPETEVPVVDGEKIVEA 153
Query: 106 EKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
EKQ GQEDAGD NKDSTAA EMTLEE
Sbjct: 154 EKQTGQEDAGDNNKDSTAAEPEEKEPEEKEMTLEE 188
>ref|XP_004253373.1| PREDICTED: uncharacterized protein LOC101260416, partial [Solanum
lycopersicum]
Length = 314
Score = 193 bits (490), Expect = 5e-47
Identities = 106/155 (68%), Positives = 111/155 (71%)
Frame = -3
Query: 466 FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXXXXXXXXXXXXXXXXXXGFNNGDA 287
FNQ+FA DENAFGSNNGFSGRY APE+GESGKVSE GFNNGDA
Sbjct: 31 FNQDFAADENAFGSNNGFSGRYSAPENGESGKVSERRGGYGGSRGGFYGGRRGGFNNGDA 90
Query: 286 AXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWGTPADEIAPETEEPVNDGEKIVEA 107
A RPR VFD+RSGTGRGNE+IKREGSGR NWGT AD+IA ETE PV DGEKIVEA
Sbjct: 91 ADGEIE-RPRRVFDRRSGTGRGNEYIKREGSGRGNWGTTADDIALETEVPVVDGEKIVEA 149
Query: 106 EKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
EKQ GQEDAGD NKDSTAA EMTLEE
Sbjct: 150 EKQTGQEDAGDDNKDSTAAELEEKEPEEKEMTLEE 184
>ref|XP_002531778.1| Plasminogen activator inhibitor 1 RNA-binding protein, putative
[Ricinus communis] gi|223528571|gb|EEF30592.1|
Plasminogen activator inhibitor 1 RNA-binding protein,
putative [Ricinus communis]
Length = 364
Score = 139 bits (351), Expect = 7e-31
Identities = 95/240 (39%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDD EDP+ IA LK V P + + Q P QAVRE
Sbjct: 12 DDDYEDPTQLIAAAHLKVVEKPKKPSAPAQAQAQ-----PVKPAKLPTKPPPPAQAVREG 66
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG--FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSE 362
+S+ G F++E ++E FG NNGFSG ++ E+GE GK SE
Sbjct: 67 KSEGGRGGGRGGGRGTGRGRGGGRGFDRELNNNETTFGGNNGFSGGHKPSEEGEGGKPSE 126
Query: 361 XXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRN 182
F+NG+A RPR ++D+RSGTGRGNEF KREG+GR N
Sbjct: 127 RRSYGGPRGGFRGGRRGG-FSNGEAGEGE---RPRRLYDRRSGTGRGNEF-KREGAGRGN 181
Query: 181 WGTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
WGTPADEIAPE EEP+ + EK + EK +G+E A D NKD+ EMTLEE
Sbjct: 182 WGTPADEIAPEIEEPLIENEKNIGIEKPSGEEGAADANKDNPMNELEEKEPEDKEMTLEE 241
>ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259885 [Vitis vinifera]
Length = 370
Score = 136 bits (342), Expect = 8e-30
Identities = 97/246 (39%), Positives = 123/246 (50%), Gaps = 8/246 (3%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKP--------VAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXX 560
DDD+EDPS IA Q++ P AAP A K P +
Sbjct: 12 DDDSEDPSQLIAAQKIVPKKALAPTQAAAPAQQAKPAKLPSK---------------PVP 56
Query: 559 PTQAVREARSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGE 380
P QAVRE +++ GFN+++A++EN+F SN G +G APEDGE
Sbjct: 57 PAQAVREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSF-SNMGVAGGQGAPEDGE 115
Query: 379 SGKVSEXXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKRE 200
GK SE F+NG+A RPR F++RSGTGRGNE +KRE
Sbjct: 116 GGKPSERRNYGGPRPPFRGRRGG--FSNGEAGDGD---RPRRAFERRSGTGRGNE-LKRE 169
Query: 199 GSGRRNWGTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXX 20
GSGR NWGT DE++ TEE VN+GEK + AEK G+ED D NK++
Sbjct: 170 GSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEK 229
Query: 19 EMTLEE 2
EMTLEE
Sbjct: 230 EMTLEE 235
>emb|CBI16673.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 136 bits (342), Expect = 8e-30
Identities = 97/246 (39%), Positives = 123/246 (50%), Gaps = 8/246 (3%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKP--------VAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXX 560
DDD+EDPS IA Q++ P AAP A K P +
Sbjct: 12 DDDSEDPSQLIAAQKIVPKKALAPTQAAAPAQQAKPAKLPSK---------------PVP 56
Query: 559 PTQAVREARSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGE 380
P QAVRE +++ GFN+++A++EN+F SN G +G APEDGE
Sbjct: 57 PAQAVREGKNESGRGGGRGGRGYGRGRGGGGFNRDYANNENSF-SNMGVAGGQGAPEDGE 115
Query: 379 SGKVSEXXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKRE 200
GK SE F+NG+A RPR F++RSGTGRGNE +KRE
Sbjct: 116 GGKPSERRNYGGPRPPFRGRRGG--FSNGEAGDGD---RPRRAFERRSGTGRGNE-LKRE 169
Query: 199 GSGRRNWGTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXX 20
GSGR NWGT DE++ TEE VN+GEK + AEK G+ED D NK++
Sbjct: 170 GSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEKEPEEK 229
Query: 19 EMTLEE 2
EMTLEE
Sbjct: 230 EMTLEE 235
>ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265608 [Vitis vinifera]
gi|296085734|emb|CBI29539.3| unnamed protein product
[Vitis vinifera]
Length = 363
Score = 131 bits (329), Expect = 2e-28
Identities = 90/239 (37%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDD +DPS +A LK A + A P Q P QAVRE
Sbjct: 12 DDDNDDPSQ-LASHLLKLAPAKKSSAP----PPQAAPAQQAKPAKLPSKPLPPAQAVRET 66
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG-FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEX 359
+++ N++ ++E+ +N+GFSG YR E+G++GK SE
Sbjct: 67 KNEVGRGGGRGGGRGYGRGRGGAGLNRDSFNNESTLNNNDGFSGGYRPSEEGDTGKSSER 126
Query: 358 XXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNW 179
GF+NG+ RPR +++RSGTGRGNE IKR+G+GR NW
Sbjct: 127 RGSGGPRSPYRGGGRRGGFSNGEVGEGE---RPRRAYERRSGTGRGNE-IKRDGAGRGNW 182
Query: 178 GTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
GTPADEIAPE EEP+N+ EK AEKQ G+E A D NK++ EMTLEE
Sbjct: 183 GTPADEIAPENEEPINETEKNTSAEKQLGEEIAADANKENPVNESEEKEPEDKEMTLEE 241
>emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]
Length = 363
Score = 129 bits (323), Expect = 1e-27
Identities = 89/239 (37%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDD +DPS +A LK A + A P Q P QAVRE
Sbjct: 12 DDDNDDPSQ-LASHLLKLAPAKKSSAP----PPQAAPAQQAKPAKLPSKPLPPAQAVRET 66
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG-FNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEX 359
+++ N++ ++E+ +N+GFSG YR E+G++GK E
Sbjct: 67 KNEVGRGGGRGSGRGYGRGRGGAGLNRDSFNNESTLNNNDGFSGGYRPSEEGDTGKSFER 126
Query: 358 XXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNW 179
GF+NG+ RPR +++RSGTGRGNE IKR+G+GR NW
Sbjct: 127 RGSGGPRSPYRGGGRRGGFSNGEVGEGE---RPRRAYERRSGTGRGNE-IKRDGAGRGNW 182
Query: 178 GTPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
GTPADEIAPE EEP+N+ EK AEKQ G+E A D NK++ EMTLEE
Sbjct: 183 GTPADEIAPENEEPINETEKNTSAEKQLGEEIAADANKENPVNESEEKEPEDKEMTLEE 241
>ref|XP_002303373.2| nuclear RNA-binding family protein [Populus trichocarpa]
gi|550342671|gb|EEE78352.2| nuclear RNA-binding family
protein [Populus trichocarpa]
Length = 361
Score = 128 bits (321), Expect = 2e-27
Identities = 95/238 (39%), Positives = 118/238 (49%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DD+ ED S +A QLK A K V+ P QAVREA
Sbjct: 13 DDNNEDLSQLVAAAQLK--------AAEKPKKVEKPAAPTSQPAKLPSRPAPPAQAVREA 64
Query: 535 RSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXX 356
+++ GFN++ ++E +F + NGFSGR R EDGE+ +
Sbjct: 65 KNEGGRGEGRGYGRGRGRGGSGGFNRDSNNNETSF-TGNGFSGRSRPSEDGEAAE----R 119
Query: 355 XXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWG 176
G++NG+ RPR ++++ SGTGRGNE IKREGSGR NWG
Sbjct: 120 RGYGAPRGGFRGSRRGGYSNGEDGEGE---RPRRMYERHSGTGRGNE-IKREGSGRGNWG 175
Query: 175 TPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
TP DEIAPETE+PV D EK V EKQ G+EDA D NKD TA EMTLEE
Sbjct: 176 TPTDEIAPETEDPVVDNEKNVITEKQQGEEDAADANKD-TAEKPEEKEPEEKEMTLEE 232
>gb|EMJ10488.1| hypothetical protein PRUPE_ppa007665mg [Prunus persica]
Length = 360
Score = 127 bits (320), Expect = 3e-27
Identities = 95/238 (39%), Positives = 115/238 (48%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DDD EDPS +A Q+ K + P + P Q PTQAVRE
Sbjct: 12 DDDNEDPSQLLAAQRQK-LPPPQPKKPQQAQPAQ--------PAKLPSKPLPPTQAVREG 62
Query: 535 RSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXX 356
+ + G F D + S NG G YRAPE+G++GK SE
Sbjct: 63 KYETGRGGGRGGGRGFGRGRGGG-GGGFPRDPISNESANGVYGGYRAPEEGDTGKPSERR 121
Query: 355 XXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWG 176
GFNNGD A RPR VFD+RSGTG G+EF KR+G+GR NWG
Sbjct: 122 GGYGGPRGSFRGGRRSGFNNGDDAEGE---RPRRVFDRRSGTGHGSEF-KRDGAGRGNWG 177
Query: 175 TPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
TP D+IA ETEEP + EK V AEKQ G+ +A D NK++T EMTLEE
Sbjct: 178 TPTDDIAQETEEPGTEIEKNVGAEKQLGENEAADANKENTVNESEEKEPEEKEMTLEE 235
>ref|XP_006440205.1| hypothetical protein CICLE_v10020747mg [Citrus clementina]
gi|557542467|gb|ESR53445.1| hypothetical protein
CICLE_v10020747mg [Citrus clementina]
Length = 364
Score = 127 bits (319), Expect = 4e-27
Identities = 90/238 (37%), Positives = 115/238 (48%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
D+D EDPS + K P A + P P QAVREA
Sbjct: 12 DNDFEDPSQLVVAGVAKLAEKPKKSAPAQAQPAS----KPAPAAKFPNKPPPPAQAVREA 67
Query: 535 RSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXX 356
R++ GF+++ + + N FG NNG SG YR E+GE G +SE
Sbjct: 68 RNEGGRGGGRGGGRGFGRGGGRGFDRD-SGNNNTFGGNNGLSGGYRPSEEGEGGNLSERR 126
Query: 355 XXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWG 176
FN+G++ RPR VF++RSGTGRGNE IKR+G+GR NWG
Sbjct: 127 GYGAPRGSFRGGRRGG-FNDGESKEGE---RPRRVFERRSGTGRGNE-IKRDGAGRGNWG 181
Query: 175 TPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
TP DEIA ETEEPV + E AEK +G+E+A D NK++ EMTLEE
Sbjct: 182 TPTDEIAQETEEPVAETEN-TNAEKPSGEENAADANKENPVDEQEEKEPEEKEMTLEE 238
>ref|XP_006477112.1| PREDICTED: plasminogen activator inhibitor 1 RNA-binding
protein-like isoform X1 [Citrus sinensis]
Length = 364
Score = 127 bits (318), Expect = 5e-27
Identities = 90/238 (37%), Positives = 115/238 (48%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
D+D EDPS + K P A + P P QAVREA
Sbjct: 12 DNDFEDPSQLVVAGVAKLAEKPKKSAPAQAQPAS----KPAPAAKFPTKPPPPAQAVREA 67
Query: 535 RSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXX 356
R++ GF+++ + + N FG NNG SG YR E+GE G +SE
Sbjct: 68 RNEGGRGGGRGGGRGFGRGGGRGFDRD-SGNTNTFGGNNGLSGGYRPSEEGEGGNLSERR 126
Query: 355 XXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWG 176
FN+G++ RPR VF++RSGTGRGNE IKR+G+GR NWG
Sbjct: 127 GYGAPRGSFRGGRRGG-FNDGESKEGE---RPRRVFERRSGTGRGNE-IKRDGAGRGNWG 181
Query: 175 TPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
TP DEIA ETEEPV + E AEK +G+E+A D NK++ EMTLEE
Sbjct: 182 TPTDEIAQETEEPVAETEN-TNAEKPSGEENAADANKENPVDEQEEKEPEEKEMTLEE 238
>gb|EXC02062.1| hypothetical protein L484_024026 [Morus notabilis]
Length = 463
Score = 126 bits (316), Expect = 8e-27
Identities = 99/268 (36%), Positives = 123/268 (45%), Gaps = 30/268 (11%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLK-PVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVRE 539
DDD EDPSL IA Q K P A P K P P QAV+E
Sbjct: 12 DDDNEDPSLLIAAAQQKLPPAQP-------KKPQAPAAAQPAKPAKLPSKPLPPAQAVKE 64
Query: 538 ARSDXXXXXXXXXXXXXXXXXXXG---FNQEFADDENAFGSNNGFSGRYRAPEDGESGKV 368
A+++ G FN++ + +N+FG+NNGFSG YR E+G+SGK
Sbjct: 65 AKNETSRGGGRGGGRGGYGGRGRGGGGFNRDSNNSDNSFGNNNGFSGGYRPSEEGDSGKP 124
Query: 367 SEXXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRG----------- 221
+E F+NG+A RPR ++++RSGTGRG
Sbjct: 125 TERRGYGSPRGSFRGGRRGG-FSNGEAVEGE---RPRRIYERRSGTGRGASPRGVPHCKA 180
Query: 220 ---------------NEFIKREGSGRRNWGTPADEIAPETEEPVNDGEKIVEAEKQAGQE 86
NE +KREGSGR NWGTP DEIAPE EEPV + EK V+AEK G E
Sbjct: 181 IKIHGMGGEAYTSSINE-LKREGSGRGNWGTPTDEIAPEVEEPVVENEKNVDAEK-LGDE 238
Query: 85 DAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
+A D NK+ EMTLEE
Sbjct: 239 EASDANKEKPEKEAEEKEPEDKEMTLEE 266
>gb|ABK94426.1| unknown [Populus trichocarpa]
Length = 370
Score = 122 bits (306), Expect = 1e-25
Identities = 96/249 (38%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DD+ ED S IA QLK P + P P QAVREA
Sbjct: 13 DDNNEDLSQLIAAAQLKAAEKPKKADKSAAAPAS-------QPAKLPTKPAPPAQAVREA 65
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG----FNQEFADDENAFGSNNGFSGRYRAPEDGESGKV 368
+++ G FN+E ++E F NGFSG R EDGE+G+
Sbjct: 66 KNEGGRGGGRGDGRGYGRGRGGGGGGRFNRESNNNETPF-IGNGFSGGSRPSEDGEAGRT 124
Query: 367 SEXXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGR 188
SE ++NG+A RPR +D+ SGTGRGNE +KREGSGR
Sbjct: 125 SERRGYGAPRGGFRGGRRGG-YSNGEAGEGE---RPRRQYDRHSGTGRGNE-LKREGSGR 179
Query: 187 RNWGTPADEIAPETEEPVNDGEKIVEAEKQ-------AGQEDAGDTNKDSTAAXXXXXXX 29
NWGTPADEIAPETEEPV D EK V EKQ A +DA D +KD+
Sbjct: 180 GNWGTPADEIAPETEEPVVDNEKSVITEKQPEEEDAAAASKDAADASKDAAVNEPEEKEP 239
Query: 28 XXXEMTLEE 2
EMTLEE
Sbjct: 240 EDKEMTLEE 248
>ref|XP_002326470.1| predicted protein [Populus trichocarpa]
gi|566149116|ref|XP_006368965.1| nuclear RNA-binding
family protein [Populus trichocarpa]
gi|550347324|gb|ERP65534.1| nuclear RNA-binding family
protein [Populus trichocarpa]
Length = 374
Score = 120 bits (302), Expect = 3e-25
Identities = 96/253 (37%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Frame = -3
Query: 715 DDDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXPTQAVREA 536
DD+ ED S IA QLK P + P P QAVREA
Sbjct: 13 DDNNEDLSQLIAAAQLKAAEKPKKADKSAAAPAS-------QPAKLPTKPAPPAQAVREA 65
Query: 535 RSDXXXXXXXXXXXXXXXXXXXG--------FNQEFADDENAFGSNNGFSGRYRAPEDGE 380
+++ G FN+E ++E F NGFSG R EDGE
Sbjct: 66 KNEGGRGGGRGDGRGYGRGRGRGGGGGGGGRFNRESNNNETPF-IGNGFSGGSRPSEDGE 124
Query: 379 SGKVSEXXXXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKRE 200
+G+ SE ++NG+A RPR +D+ SGTGRGNE +KRE
Sbjct: 125 AGRTSERRGYGAPRGGFRGGRRGG-YSNGEAGEGE---RPRRQYDRHSGTGRGNE-LKRE 179
Query: 199 GSGRRNWGTPADEIAPETEEPVNDGEKIVEAEKQ-------AGQEDAGDTNKDSTAAXXX 41
GSGR NWGTPADEIAPETEEPV D EK V EKQ A +DA D +KD+
Sbjct: 180 GSGRGNWGTPADEIAPETEEPVVDNEKSVITEKQPEEEDAAAASKDAADASKDAAVNEPE 239
Query: 40 XXXXXXXEMTLEE 2
EMTLEE
Sbjct: 240 EKEPEDKEMTLEE 252
>gb|EOY24223.1| Hyaluronan / mRNA binding family [Theobroma cacao]
Length = 358
Score = 120 bits (301), Expect = 4e-25
Identities = 93/238 (39%), Positives = 114/238 (47%), Gaps = 1/238 (0%)
Frame = -3
Query: 712 DDAEDPSLFIAVQQLKPVAAPVAGATTKKGPVQGXXXXXXXXXXXXXXXXXP-TQAVREA 536
DD EDPSL IA Q + + P KK P P QAVREA
Sbjct: 12 DDIEDPSLLIAAAQQQKLEKP------KKAPASAPAQAQPAKPAKLPTKPTPPAQAVREA 65
Query: 535 RSDXXXXXXXXXXXXXXXXXXXGFNQEFADDENAFGSNNGFSGRYRAPEDGESGKVSEXX 356
+S+ G F D N ++NGFSG YR E+GE GK+SE
Sbjct: 66 KSEPGRGGGRGGGRGGGRGGGRG-GSGFNRDSNVGDNSNGFSGGYRPSEEGE-GKLSERR 123
Query: 355 XXXXXXXXXXXXXXXXGFNNGDAAXXXXXERPRIVFDQRSGTGRGNEFIKREGSGRRNWG 176
F+N ++ RPR +D+RSGTGRGNEF KR+G+GR NWG
Sbjct: 124 GYGGPRGSFRGGRRGG-FSNEESGEGE---RPRRQYDRRSGTGRGNEF-KRDGAGRGNWG 178
Query: 175 TPADEIAPETEEPVNDGEKIVEAEKQAGQEDAGDTNKDSTAAXXXXXXXXXXEMTLEE 2
T DEIAPETE V + EK V AEKQ+G+ED D +K++ A EMTLEE
Sbjct: 179 TSTDEIAPETEVNVPENEKNVGAEKQSGEEDVVDASKENAANEPEEKEPENKEMTLEE 236