BLASTX nr result
ID: Atropa21_contig00020003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020003
(1005 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360680.1| PREDICTED: pentatricopeptide repeat-containi... 130 8e-28
ref|XP_004240287.1| PREDICTED: pentatricopeptide repeat-containi... 125 3e-26
gb|EMJ09377.1| hypothetical protein PRUPE_ppa017277mg, partial [... 94 8e-17
ref|XP_004289369.1| PREDICTED: pentatricopeptide repeat-containi... 93 1e-16
emb|CBI41046.3| unnamed protein product [Vitis vinifera] 92 2e-16
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera] 92 2e-16
ref|XP_006466421.1| PREDICTED: pentatricopeptide repeat-containi... 91 9e-16
ref|XP_006426143.1| hypothetical protein CICLE_v10025041mg [Citr... 91 9e-16
gb|EXC12608.1| hypothetical protein L484_012985 [Morus notabilis] 86 3e-14
gb|EOX91771.1| Tetratricopeptide repeat (TPR)-like superfamily p... 85 4e-14
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi... 82 3e-13
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-11
gb|ADE76509.1| unknown [Picea sitchensis] 71 6e-10
ref|XP_004513641.1| PREDICTED: pentatricopeptide repeat-containi... 71 8e-10
gb|EXB40230.1| hypothetical protein L484_003942 [Morus notabilis] 70 1e-09
ref|XP_006292792.1| hypothetical protein CARUB_v10019043mg [Caps... 70 1e-09
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ... 70 2e-09
ref|XP_004966624.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-09
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
>ref|XP_006360680.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Solanum tuberosum]
Length = 723
Score = 130 bits (327), Expect = 8e-28
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQ GSS
Sbjct: 660 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQPGSS 719
Query: 181 WIGS 192
WIGS
Sbjct: 720 WIGS 723
>ref|XP_004240287.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Solanum lycopersicum]
Length = 720
Score = 125 bits (313), Expect = 3e-26
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
YGNV+LGRIAAGFLLETEKNNP+VYVLLSNIYASAENWE SANVRKLMNKCGVLKQ GSS
Sbjct: 657 YGNVKLGRIAAGFLLETEKNNPSVYVLLSNIYASAENWEGSANVRKLMNKCGVLKQPGSS 716
Query: 181 WIGS 192
WIGS
Sbjct: 717 WIGS 720
>gb|EMJ09377.1| hypothetical protein PRUPE_ppa017277mg, partial [Prunus persica]
Length = 634
Score = 94.0 bits (232), Expect = 8e-17
Identities = 43/62 (69%), Positives = 53/62 (85%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGR AGFLLETE+NNPTVYVLL++IYA+A WE++ANVR+LMN+ GV K G S
Sbjct: 573 HGNLRLGRTVAGFLLETEQNNPTVYVLLASIYAAAGQWEEAANVRELMNRTGVAKTRGCS 632
Query: 181 WI 186
WI
Sbjct: 633 WI 634
>ref|XP_004289369.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Fragaria vesca subsp. vesca]
Length = 733
Score = 93.2 bits (230), Expect = 1e-16
Identities = 42/64 (65%), Positives = 55/64 (85%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI AG+LLETE+NNP+VYVLL++IYA+A WE++ANVR+LMN+ G +K G S
Sbjct: 670 HGNLRLGRIVAGYLLETEQNNPSVYVLLASIYAAAGQWEEAANVRELMNRTGEVKTPGCS 729
Query: 181 WIGS 192
WI S
Sbjct: 730 WINS 733
>emb|CBI41046.3| unnamed protein product [Vitis vinifera]
Length = 243
Score = 92.4 bits (228), Expect = 2e-16
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI AGFLLE E+N+P VYVLLSNIYA+A WE++AN R LM K V KQ G S
Sbjct: 180 HGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCS 239
Query: 181 WIGS 192
WIGS
Sbjct: 240 WIGS 243
>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 92.4 bits (228), Expect = 2e-16
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI AGFLLE E+N+P VYVLLSNIYA+A WE++AN R LM K V KQ G S
Sbjct: 666 HGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCS 725
Query: 181 WIGS 192
WIGS
Sbjct: 726 WIGS 729
>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 92.4 bits (228), Expect = 2e-16
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI AGFLLE E+N+P VYVLLSNIYA+A WE++AN R LM K V KQ G S
Sbjct: 627 HGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCS 686
Query: 181 WIGS 192
WIGS
Sbjct: 687 WIGS 690
>ref|XP_006466421.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Citrus sinensis]
gi|568848690|ref|XP_006478131.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g49740-like [Citrus sinensis]
Length = 733
Score = 90.5 bits (223), Expect = 9e-16
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI AG LLE E++ P+VYVLLSNIYA+A WE++AN+R+L+ + GV+KQ G S
Sbjct: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
Query: 181 WIGS 192
WIGS
Sbjct: 730 WIGS 733
>ref|XP_006426143.1| hypothetical protein CICLE_v10025041mg [Citrus clementina]
gi|557528133|gb|ESR39383.1| hypothetical protein
CICLE_v10025041mg [Citrus clementina]
Length = 696
Score = 90.5 bits (223), Expect = 9e-16
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI AG LLE E++ P+VYVLLSNIYA+A WE++AN+R+L+ + GV+KQ G S
Sbjct: 633 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVMKQPGCS 692
Query: 181 WIGS 192
WIGS
Sbjct: 693 WIGS 696
>gb|EXC12608.1| hypothetical protein L484_012985 [Morus notabilis]
Length = 737
Score = 85.5 bits (210), Expect = 3e-14
Identities = 38/64 (59%), Positives = 52/64 (81%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGRI A LLE E+NNP+VYVLL+NIYA+A+ W+++A +R+LM + G +KQ G S
Sbjct: 670 HGNLRLGRIVARSLLEAEENNPSVYVLLANIYAAADQWQEAATIRELMRRKGTMKQPGCS 729
Query: 181 WIGS 192
WI S
Sbjct: 730 WITS 733
>gb|EOX91771.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508699876|gb|EOX91772.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 738
Score = 85.1 bits (209), Expect = 4e-14
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = +1
Query: 7 NVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSSWI 186
N+RL R AG LLETE+NNP+VYVLLSNIYA+A WE++A VR+ M GV+KQ GSSWI
Sbjct: 677 NLRLARTIAGILLETEQNNPSVYVLLSNIYAAAGQWEEAARVRESMKNVGVMKQPGSSWI 736
>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 82.4 bits (202), Expect = 3e-13
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +1
Query: 7 NVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSSWI 186
N+RLGRI A LLE E++NP+VYV+LSNIYASA WE++ANVR+L+ K G +KQ G SWI
Sbjct: 675 NLRLGRIVARILLEKERDNPSVYVVLSNIYASAGCWEEAANVRELIKKTGSMKQPGCSWI 734
>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like isoform X1 [Glycine max]
Length = 722
Score = 75.9 bits (185), Expect = 2e-11
Identities = 34/62 (54%), Positives = 47/62 (75%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+ LGR A +LE + NNP+VYVLLSNI A+A WE++AN+R++M + G +KQ G S
Sbjct: 659 HGNLGLGRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCS 718
Query: 181 WI 186
WI
Sbjct: 719 WI 720
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 71.2 bits (173), Expect = 6e-10
Identities = 51/140 (36%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
YGN+ LG+ AA L + E +N YVLLSNIYA+A W+D A VRK+M GV KQ G S
Sbjct: 56 YGNIDLGKHAAECLFQLEPHNAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCS 115
Query: 181 WIGS*N---SFSXXXXXXXXXXXXFN-LTSQNRSFRLAMEMRN*NFLIHACRSKGKR*SL 348
WI N +F ++ L R A + + NF++H + K SL
Sbjct: 116 WIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNFVLHDVEMEQKEHSL 175
Query: 349 SYISH--------FSSLPGI 384
+ S S+LPG+
Sbjct: 176 YHHSEKLAIAFGLISTLPGL 195
>ref|XP_004513641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cicer arietinum]
Length = 735
Score = 70.9 bits (172), Expect = 8e-10
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN+RLGR A LLE E NN +VYVLLSNI A+A WE++A +R M + G KQ G S
Sbjct: 672 HGNLRLGRKVARVLLEREHNNASVYVLLSNICAAAGQWEEAAKLRDTMKQFGTTKQPGCS 731
Query: 181 WI 186
WI
Sbjct: 732 WI 733
>gb|EXB40230.1| hypothetical protein L484_003942 [Morus notabilis]
Length = 810
Score = 70.5 bits (171), Expect = 1e-09
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GNV LG AA LLE E +N YVLLSN+Y++A WED+A +R+LM G+ K+ G S
Sbjct: 620 HGNVELGERAAKNLLELEPSNAVPYVLLSNMYSAAGRWEDAARIRRLMKSVGISKEPGCS 679
Query: 181 WI 186
WI
Sbjct: 680 WI 681
>ref|XP_006292792.1| hypothetical protein CARUB_v10019043mg [Capsella rubella]
gi|482561499|gb|EOA25690.1| hypothetical protein
CARUB_v10019043mg [Capsella rubella]
Length = 737
Score = 70.1 bits (170), Expect = 1e-09
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+G+++LG++ A L+E EKN+P+VYV LSNIYA A W+++ R+ MN G +KQ G S
Sbjct: 674 HGDLKLGKMVAKLLIEKEKNDPSVYVQLSNIYAGAGLWKEAEETREAMNSIGAMKQRGCS 733
Query: 181 WI 186
W+
Sbjct: 734 WM 735
>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321831|gb|EFH52252.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 731
Score = 69.7 bits (169), Expect = 2e-09
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+G+++LG++ A L+E EKN+P+VYV LSNIYA A W+++ RK +N G +KQ G S
Sbjct: 668 HGDLKLGKMVARLLMEKEKNDPSVYVQLSNIYAGAGLWKEAEETRKAINMIGAMKQRGCS 727
Query: 181 WI 186
W+
Sbjct: 728 WM 729
>ref|XP_004966624.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Setaria italica]
Length = 618
Score = 69.3 bits (168), Expect = 2e-09
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GNV +G +AA LLE E +N Y LLSNIYASA W+++A +R MN G+ KQ G S
Sbjct: 506 HGNVSIGNLAARSLLEAEPDNAGTYTLLSNIYASAGKWKEAAQIRSEMNNRGLKKQPGCS 565
Query: 181 WI 186
WI
Sbjct: 566 WI 567
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = +1
Query: 1 YGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQSGSS 180
+GN++LG+ A+ +LE E N+P +VLLSN+YAS WE+ A +RK M + ++K++G S
Sbjct: 659 HGNLQLGKYASEMILEQEPNDPAAHVLLSNLYASRRQWEEVAKIRKDMKEKRLVKEAGCS 718
Query: 181 WIGS*NS 201
WI + NS
Sbjct: 719 WIEAENS 725