BLASTX nr result
ID: Atropa21_contig00019964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00019964
(517 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353661.1| PREDICTED: CHD3-type chromatin-remodeling fa... 280 2e-73
ref|XP_004241797.1| PREDICTED: CHD3-type chromatin-remodeling fa... 216 3e-54
ref|XP_004244891.1| PREDICTED: CHD3-type chromatin-remodeling fa... 171 1e-40
ref|XP_006343513.1| PREDICTED: CHD3-type chromatin-remodeling fa... 170 2e-40
ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa... 97 3e-18
emb|CBI21082.3| unnamed protein product [Vitis vinifera] 95 9e-18
emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera] 95 9e-18
ref|XP_002324903.2| GYMNOS family protein [Populus trichocarpa] ... 87 2e-15
ref|XP_006483455.1| PREDICTED: CHD3-type chromatin-remodeling fa... 82 6e-14
ref|XP_006450306.1| hypothetical protein CICLE_v10010331mg [Citr... 82 6e-14
ref|XP_002309665.2| GYMNOS family protein [Populus trichocarpa] ... 78 1e-12
ref|XP_002515445.1| chromodomain helicase DNA binding protein, p... 74 3e-11
ref|XP_003603311.1| Chromatin remodeling complex subunit [Medica... 67 2e-09
ref|XP_006405113.1| hypothetical protein EUTSA_v10000014mg [Eutr... 67 2e-09
ref|XP_002878829.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata] ... 64 2e-08
ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type ch... 64 2e-08
ref|XP_004501371.1| PREDICTED: CHD3-type chromatin-remodeling fa... 61 1e-07
ref|XP_004501370.1| PREDICTED: CHD3-type chromatin-remodeling fa... 61 1e-07
ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling fa... 61 1e-07
ref|NP_565587.1| CHD3-type chromatin-remodeling factor PICKLE [A... 60 3e-07
>ref|XP_006353661.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
tuberosum]
Length = 1473
Score = 280 bits (715), Expect = 2e-73
Identities = 136/170 (80%), Positives = 148/170 (87%)
Frame = +2
Query: 5 HELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVAQ 184
HELPGKEMECDTKIVDEPSR VEAAGTE+ DNFPKLI ISPQGISE+ACDGEVDRLSVAQ
Sbjct: 1251 HELPGKEMECDTKIVDEPSRSVEAAGTEMVDNFPKLIAISPQGISEIACDGEVDRLSVAQ 1310
Query: 185 LYNTMCKVLSDNDQDSFNAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFPRR 364
LYN MCKVLSD +DSFNAVA+QPA LA+K+ LLPLEAFFQ+MKR+LSSAHQNP + PR
Sbjct: 1311 LYNKMCKVLSDYGEDSFNAVASQPASLALKRNLLPLEAFFQEMKRVLSSAHQNPGNVPRS 1370
Query: 365 ELQEDWKVEGGKPSPEASFLVDSRLHRADEEHDNFPTGTESGSASTSNLT 514
ELQEDWK EGGKPSP SFL D LH A+E+HDNFPTGTE S TSNL+
Sbjct: 1371 ELQEDWKPEGGKPSPVPSFLRDGNLHSAEEKHDNFPTGTEFVSEGTSNLS 1420
>ref|XP_004241797.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
lycopersicum]
Length = 1442
Score = 216 bits (550), Expect = 3e-54
Identities = 106/130 (81%), Positives = 116/130 (89%)
Frame = +2
Query: 5 HELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVAQ 184
HELPGKEME DTKIVDE SR VEAAGTE+ DNFPKLI ISPQGISE+ACDGEVDRLSVAQ
Sbjct: 1248 HELPGKEMERDTKIVDELSRSVEAAGTEMVDNFPKLIAISPQGISEIACDGEVDRLSVAQ 1307
Query: 185 LYNTMCKVLSDNDQDSFNAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFPRR 364
LYN MCKVLSD+ +DSFNAVA+QPA LA+K+ LLPLEAFFQ+MKR+LSSAHQNP + P
Sbjct: 1308 LYNKMCKVLSDSGEDSFNAVASQPASLALKRNLLPLEAFFQEMKRVLSSAHQNPGNAPGS 1367
Query: 365 ELQEDWKVEG 394
ELQEDWK EG
Sbjct: 1368 ELQEDWKPEG 1377
>ref|XP_004244891.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
lycopersicum]
Length = 1463
Score = 171 bits (432), Expect = 1e-40
Identities = 95/172 (55%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
SHELP + M CDTK+VDEP+R VE A TE+ D+ P+L+ ISPQGIS+VACD + DRLSVA
Sbjct: 1255 SHELPNEGMACDTKVVDEPNRNVEEANTEMTDHSPRLVAISPQGISQVACDSKPDRLSVA 1314
Query: 182 QLYNTMCKVLSDNDQDSFNAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFPR 361
+LYN MC VLS N QDSFN + P+ MKK +LPLEA Q M +ILSS QN +F R
Sbjct: 1315 ELYNKMCLVLSGNVQDSFN--ESHPSS-GMKKNILPLEAICQQMNQILSSPQQNTPNFGR 1371
Query: 362 RELQEDWKVEGGKPS-PEASFLVDSRLHRADEEHDNFPTGTESGSASTSNLT 514
+ +QED E K S P S VD R+ A++EHD+ ESGS S S+ T
Sbjct: 1372 KLVQEDRNSEASKSSYPVPSSQVDDRVLNAEKEHDSVLKKPESGSKSASSCT 1423
>ref|XP_006343513.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
tuberosum]
Length = 1466
Score = 170 bits (431), Expect = 2e-40
Identities = 93/172 (54%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
SHELP + M CDTK+VDEP+R VE A TE+ D+ P+L+ ISPQGIS+VACDG+ DRLSVA
Sbjct: 1259 SHELPNEGMVCDTKVVDEPNRNVEEANTEMTDHSPRLVAISPQGISQVACDGKPDRLSVA 1318
Query: 182 QLYNTMCKVLSDNDQDSFNAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFPR 361
+LYN MC VLS N QDSFN M+K ++PLEA Q M +ILSS QN +F R
Sbjct: 1319 ELYNKMCLVLSGNVQDSFN---ESHPSTGMRKNIVPLEAICQQMNQILSSPQQNTPNFER 1375
Query: 362 RELQEDWKVEGGKPS-PEASFLVDSRLHRADEEHDNFPTGTESGSASTSNLT 514
+ +QED E K S P S VD R+ A++EHD+ ESGS S S+ T
Sbjct: 1376 KLVQEDRNSEASKSSYPVPSSQVDDRVLNAEKEHDSVLKKPESGSKSASSCT 1427
>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
vinifera]
Length = 1472
Score = 96.7 bits (239), Expect = 3e-18
Identities = 58/170 (34%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S+E+ ++ E + K++D S +I D P++ I+ + IS ACD + +R +A
Sbjct: 1226 SNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMA 1285
Query: 182 QLYNTMCKVLSDNDQDSFNA-VANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFP 358
+LYN MCKVL++N +S + +ANQPA L ++KKLLPLEA +D+ RILS QNP++
Sbjct: 1286 RLYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSE 1345
Query: 359 RRELQEDWKVEGGKPSPEASFLVDSRLHRADEEHDNFPTGTESGSASTSN 508
+ L + + P+ A S + + D++ + TE A T +
Sbjct: 1346 QTLLGSNQQSLAEAPTSVAGSSSPS-IQQQDDQRPSAEQDTEMRDALTKS 1394
>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 95.1 bits (235), Expect = 9e-18
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S+E+ ++ E + K++D S +I D P++ I+ + IS ACD + +R +A
Sbjct: 1226 SNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMA 1285
Query: 182 QLYNTMCKVLSDNDQDSFNA-VANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSS 352
+LYN MCKVL++N +S + +ANQPA L ++KKLLPLEA +D+ RILS QNP++
Sbjct: 1286 RLYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPAT 1343
>emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]
Length = 755
Score = 95.1 bits (235), Expect = 9e-18
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S+E+ ++ E + K++D S +I D P++ I+ + IS ACD + +R +A
Sbjct: 509 SNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMA 568
Query: 182 QLYNTMCKVLSDNDQDSFNA-VANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSS 352
+LYN MCKVL++N +S + +ANQPA L ++KKLLPLEA +D+ RILS QNP++
Sbjct: 569 RLYNEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPAT 626
>ref|XP_002324903.2| GYMNOS family protein [Populus trichocarpa]
gi|550317867|gb|EEF03468.2| GYMNOS family protein
[Populus trichocarpa]
Length = 1442
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
++E+ +E +C+T D S G ++ D P++ I+ + IS ACD DRL++
Sbjct: 1212 ANEITSEEADCETMAADRSSLGSIEISAQMIDQLPRMESIALEEISAAACDDNPDRLALP 1271
Query: 182 QLYNTMCKVLSDNDQDSFN-AVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFP 358
QLYN MC VL N +S ++ NQPA L +++ L PLE ++ + + LS + Q S+
Sbjct: 1272 QLYNKMCTVLEQNIHESIQISLTNQPASLKLRQDLQPLETVYEQINQFLSPSQQKSSTSE 1331
Query: 359 RRELQEDWKVEGGKPSPEASF 421
+ L V+ S +A F
Sbjct: 1332 QATLGSSKHVQAESQSSQADF 1352
>ref|XP_006483455.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X1 [Citrus sinensis] gi|568859871|ref|XP_006483456.1|
PREDICTED: CHD3-type chromatin-remodeling factor
PICKLE-like isoform X2 [Citrus sinensis]
Length = 1462
Score = 82.4 bits (202), Expect = 6e-14
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S+E+P +E E + K + PS +++ D PKL I+ + IS ACD + DRL +A
Sbjct: 1226 SNEIPSEEPESERKTTERPSPTSMEIDSQMVDQLPKLEAITSEEISAAACDSDADRLGLA 1285
Query: 182 QLYNTMCKVLSDNDQDSF-NAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFP 358
Q YN MCKVL +N + ++ +QPA ++ L LE +D+ +ILS+ P P
Sbjct: 1286 QHYNEMCKVLEENVHEVVKTSLTSQPASAQLRTNLQLLETLCEDVNQILSTQTSPPLEQP 1345
Query: 359 R----RELQEDWKVEGGKPS 406
+ELQ + + +PS
Sbjct: 1346 MPNEDKELQPEIQSTSAEPS 1365
>ref|XP_006450306.1| hypothetical protein CICLE_v10010331mg [Citrus clementina]
gi|557553532|gb|ESR63546.1| hypothetical protein
CICLE_v10010331mg [Citrus clementina]
Length = 1448
Score = 82.4 bits (202), Expect = 6e-14
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S+E+P +E E + K + PS +++ D PKL I+ + IS ACD + DRL +A
Sbjct: 1212 SNEIPSEEPESERKTTERPSPTSMEIDSQMVDQLPKLEAITSEEISAAACDSDADRLGLA 1271
Query: 182 QLYNTMCKVLSDNDQDSF-NAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFP 358
Q YN MCKVL +N + ++ +QPA ++ L LE +D+ +ILS+ P P
Sbjct: 1272 QHYNEMCKVLEENVHEVVKTSLTSQPASAQLRTNLQLLETLCEDVNQILSTQTSPPLEQP 1331
Query: 359 R----RELQEDWKVEGGKPS 406
+ELQ + + +PS
Sbjct: 1332 MPNEDKELQPEIQSTSAEPS 1351
>ref|XP_002309665.2| GYMNOS family protein [Populus trichocarpa]
gi|550337223|gb|EEE93188.2| GYMNOS family protein
[Populus trichocarpa]
Length = 1471
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +2
Query: 5 HELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVAQ 184
+E+ +E + +TK D S G ++ D P++ I + IS ACD DRL++A+
Sbjct: 1233 NEITSEEADGETKAADSSSLGSIEINAQMIDQLPQMEPIGSEEISAAACDDNPDRLALAE 1292
Query: 185 LYNTMCKVLSDNDQDSFN-AVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSS 352
YN MC VL N ++ ++ N PA L +++ L PLE F+ M +ILS Q +S
Sbjct: 1293 HYNKMCTVLEQNVHETIQISLTNHPASLKLRQGLQPLEMIFEQMNQILSPLQQKSTS 1349
>ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis] gi|223545389|gb|EEF46894.1| chromodomain
helicase DNA binding protein, putative [Ricinus communis]
Length = 1470
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S+E+ +E E D K D + G ++ D P+ I+ + I A D + DRL +
Sbjct: 1225 SNEIATEEPEGDIKAADGFNLGSTETDAQMIDQLPQTELITTEEILTAAYDDDPDRLELP 1284
Query: 182 QLYNTMCKVLSDNDQDSF-NAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQ 340
QLYN MC +L N Q+S ++ NQPA L +++ LLPLE Q + +ILS Q
Sbjct: 1285 QLYNKMCNILEQNVQESVQTSITNQPASLKLREGLLPLETISQQINQILSHPQQ 1338
>ref|XP_003603311.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355492359|gb|AES73562.1| Chromatin remodeling complex
subunit [Medicago truncatula]
Length = 1483
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = +2
Query: 8 ELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVAQL 187
E+ +E++ + K PS T++ D P++ I+P+ +S V CD + +RL + +L
Sbjct: 1298 EVTNEELKSEPKSTTIPSFISVDTDTQMIDQLPQVEIIAPEDVS-VVCDSDSNRLELVRL 1356
Query: 188 YNTMCKVLSDNDQDSF-NAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNP 346
YN MCKV+ +N D ++ A +PA + KK PLE +D+ RIL+ + P
Sbjct: 1357 YNEMCKVVEENPMDLVQSSSAREPAEVNAVKKCPPLETICEDINRILTPTAEQP 1410
>ref|XP_006405113.1| hypothetical protein EUTSA_v10000014mg [Eutrema salsugineum]
gi|567192116|ref|XP_006405114.1| hypothetical protein
EUTSA_v10000014mg [Eutrema salsugineum]
gi|557106241|gb|ESQ46566.1| hypothetical protein
EUTSA_v10000014mg [Eutrema salsugineum]
gi|557106242|gb|ESQ46567.1| hypothetical protein
EUTSA_v10000014mg [Eutrema salsugineum]
Length = 1386
Score = 67.0 bits (162), Expect = 2e-09
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S +P +E E + K+ D E+ D PK I+ + + + A D +R+ +A
Sbjct: 1207 SSSMPSEEPEAEAKVTDSVRANFVEVDDEMLDGLPKTEPITSEEMMDAAVDNNQERVEIA 1266
Query: 182 QLYNTMCKVLSDNDQDSFNA-VANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQ------ 340
QLYN MCK L +N ++S A V NQP+ + + E+ ++ RILS++
Sbjct: 1267 QLYNKMCKDLDENARESVQAYVNNQPSNAKLNESFRSFESINGNISRILSASSDQCKSHE 1326
Query: 341 ----NPSSFPRRELQEDWK----------VEGGKPSPEASFLVDSRLHRADEE 457
N ++ ++ E+ K +EG + EAS D ++ A EE
Sbjct: 1327 DTKPNLNNVEMKDSVEERKPLRGSVDLNVLEGEENIAEASGSADVKMEEAKEE 1379
>ref|XP_002878829.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata]
gi|297324668|gb|EFH55088.1| PKL/SSL2 [Arabidopsis lyrata
subsp. lyrata]
Length = 1399
Score = 64.3 bits (155), Expect = 2e-08
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S +P +E E + K+ D E+ D PK I+ + I A D R+ +A
Sbjct: 1216 SSSIPAEEPEAEPKVTDTVGVSFIEVDDEMLDGLPKTDPITSEEIMVAAVDNNQARVEIA 1275
Query: 182 QLYNTMCKVLSDNDQDSFNA-VANQPAGLAMKKKLLPLEAFFQDMKRILSS------AHQ 340
Q YN MCKV ++N ++S A V NQP + + LE+ +++ ILS+ +H+
Sbjct: 1276 QHYNQMCKVFNENARESLQAYVNNQPPSTKVNESFCALESINGNIRTILSTPLDQSKSHE 1335
Query: 341 NP-----SSFPRRELQEDWK-----------VEGGKPSPEASFLVDSRLHRADEE 457
N ++ ++ E+ K +EG + EAS VD ++ A EE
Sbjct: 1336 NDTKPNLNNVDMKDTAEETKPLRGGVVDLNVMEGEENIGEASGSVDVKMEEAKEE 1390
>ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling factor
PICKLE-like [Cucumis sativus]
Length = 1474
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 HELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVAQ 184
+++ +++E ++K+ + P T+ AD P++ IS + S ACD DRL +++
Sbjct: 1229 NDITSEDIENESKVSNLPGASTVETDTQKADQLPQVDPISSRETS-AACDDNPDRLELSR 1287
Query: 185 LYNTMCKVLSDNDQDSFN-AVANQPAGLAMKKKLLPLEAFFQDMKRILS 328
LYN MCKV+ +N ++ + A + + +K LLPLE +D+ RILS
Sbjct: 1288 LYNEMCKVVDENCRELVHAATGSYHSSSDVKVNLLPLEKIIEDVDRILS 1336
>ref|XP_004501371.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X2 [Cicer arietinum]
Length = 1401
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
++E+ E++ PS T++ D P++ I+P+ S VACD + +RL +
Sbjct: 1223 ANEVTNDELKTVPNATTNPSYKSGDTDTQMIDQLPQVETIAPEDAS-VACDSDPNRLKLV 1281
Query: 182 QLYNTMCKVLSDNDQDSFNAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFPR 361
+LYN MCKV+ +N +A +P + KKL E QD+ RIL+ ++
Sbjct: 1282 ELYNEMCKVVEENP-----TLAREPEEVNAVKKLPSFEIICQDINRILTPTVEHGEVLGS 1336
Query: 362 REL---QEDWKVEGGKPSPEASFLVDS 433
+ L Q D K++ + DS
Sbjct: 1337 KSLPTHQNDCKLDSSAEDGTKDMVTDS 1363
>ref|XP_004501370.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X1 [Cicer arietinum]
Length = 1402
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
++E+ E++ PS T++ D P++ I+P+ S VACD + +RL +
Sbjct: 1224 ANEVTNDELKTVPNATTNPSYKSGDTDTQMIDQLPQVETIAPEDAS-VACDSDPNRLKLV 1282
Query: 182 QLYNTMCKVLSDNDQDSFNAVANQPAGLAMKKKLLPLEAFFQDMKRILSSAHQNPSSFPR 361
+LYN MCKV+ +N +A +P + KKL E QD+ RIL+ ++
Sbjct: 1283 ELYNEMCKVVEENP-----TLAREPEEVNAVKKLPSFEIICQDINRILTPTVEHGEVLGS 1337
Query: 362 REL---QEDWKVEGGKPSPEASFLVDS 433
+ L Q D K++ + DS
Sbjct: 1338 KSLPTHQNDCKLDSSAEDGTKDMVTDS 1364
>ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Cucumis
sativus]
Length = 1474
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 HELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVAQ 184
+++ +++E ++K+ + P T+ AD P++ IS + S ACD DRL +++
Sbjct: 1229 NDITSEDIENESKVSNLPGASTVETDTQKADQLPQVDPISSRETS-AACDDNPDRLELSR 1287
Query: 185 LYNTMCKVLSDNDQDSFN-AVANQPAGLAMKKKLLPLEAFFQDMKRILS 328
LYN MCKV+ +N ++ + A + + +K LLPL +D+ RILS
Sbjct: 1288 LYNEMCKVVDENCRELVHAATGSYHSSSDVKVNLLPLGKIIEDVDRILS 1336
>ref|NP_565587.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
gi|75193642|sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type
chromatin-remodeling factor PICKLE; AltName: Full=Protein
GYMNOS gi|6318930|gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE
[Arabidopsis thaliana]
gi|6478518|gb|AAF13875.1|AF185577_1 chromatin remodeling
factor CHD3 [Arabidopsis thaliana]
gi|330252572|gb|AEC07666.1| CHD3-type
chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
Length = 1384
Score = 60.1 bits (144), Expect = 3e-07
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Frame = +2
Query: 2 SHELPGKEMECDTKIVDEPSRGVEAAGTEIADNFPKLIEISPQGISEVACDGEVDRLSVA 181
S +P +E E + KI D E+ D PK I+ + I A D R+ +A
Sbjct: 1201 SSSIPTEEPEAEPKIADTVGVSFIEVDDEMLDGLPKTDPITSEEIMGAAVDNNQARVEIA 1260
Query: 182 QLYNTMCKVLSDNDQDSFNA-VANQPAGLAMKKKLLPLEAFFQDMKRIL------SSAHQ 340
Q YN MCK+L +N ++S A V NQP + + L++ ++ IL S +H+
Sbjct: 1261 QHYNQMCKLLDENARESVQAYVNNQPPSTKVNESFRALKSINGNINTILSITSDQSKSHE 1320
Query: 341 NP-----SSFPRRELQEDWK-----------VEGGKPSPEASFLVDSRLHRADEE 457
+ ++ ++ E+ K VEG + EAS VD ++ A EE
Sbjct: 1321 DDTKPDLNNVEMKDTAEETKPLRGGVVDLNVVEGEENIAEASGSVDVKMEEAKEE 1375