BLASTX nr result
ID: Atropa21_contig00019904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00019904
(1129 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244040.1| PREDICTED: poly(A)-specific ribonuclease PAR... 665 0.0
ref|XP_006346129.1| PREDICTED: poly(A)-specific ribonuclease PAR... 660 0.0
emb|CBI39748.3| unnamed protein product [Vitis vinifera] 487 e-135
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR... 487 e-135
gb|EMJ08336.1| hypothetical protein PRUPE_ppa002362mg [Prunus pe... 483 e-134
ref|XP_004296331.1| PREDICTED: poly(A)-specific ribonuclease PAR... 470 e-130
ref|XP_006474883.1| PREDICTED: poly(A)-specific ribonuclease PAR... 470 e-130
ref|XP_006452603.1| hypothetical protein CICLE_v10007611mg [Citr... 469 e-130
ref|XP_006452602.1| hypothetical protein CICLE_v10007611mg [Citr... 469 e-130
emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera] 468 e-129
gb|EOY12009.1| Poly(A)-specific ribonuclease PARN isoform 1 [The... 456 e-126
ref|XP_002522771.1| conserved hypothetical protein [Ricinus comm... 453 e-125
ref|XP_004516095.1| PREDICTED: poly(A)-specific ribonuclease PAR... 451 e-124
ref|XP_002300380.2| CAF1 family ribonuclease family protein [Pop... 446 e-122
gb|EXB36053.1| Poly(A)-specific ribonuclease PARN [Morus notabilis] 439 e-121
gb|ESW18644.1| hypothetical protein PHAVU_006G058000g [Phaseolus... 432 e-118
ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PAR... 431 e-118
ref|XP_006602124.1| PREDICTED: poly(A)-specific ribonuclease PAR... 430 e-118
ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PAR... 430 e-118
ref|NP_001077725.4| poly(A)-specific ribonuclease PARN [Arabidop... 418 e-114
>ref|XP_004244040.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Solanum
lycopersicum]
Length = 711
Score = 665 bits (1716), Expect = 0.0
Identities = 332/377 (88%), Positives = 359/377 (95%), Gaps = 1/377 (0%)
Frame = +1
Query: 1 SSSETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEA 180
SSSE KQISTDP+QRFQMVFFKTRP +ALS FTSRQLRVIKAVT+KHFKDLAYIRVAGE+
Sbjct: 236 SSSEIKQISTDPSQRFQMVFFKTRPGIALSDFTSRQLRVIKAVTKKHFKDLAYIRVAGES 295
Query: 181 TSPQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNC 360
TSPQQLIVYTDSNDDRDL MKEVKDGL KEAE+KV+SAVGFRHVIDLLSSE+KLI+GHNC
Sbjct: 296 TSPQQLIVYTDSNDDRDLLMKEVKDGLRKEAEMKVESAVGFRHVIDLLSSEQKLIIGHNC 355
Query: 361 FLDMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRA 540
FLD+AH+YSKFIGPLPSTAED VSS+QK FP I+DTKILLNA+GVF++ +NKS+TSLSRA
Sbjct: 356 FLDVAHMYSKFIGPLPSTAEDYVSSLQKLFPTIVDTKILLNANGVFRQTLNKSNTSLSRA 415
Query: 541 FVSICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQAC 720
FVSICP IALG+KTS LADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQAC
Sbjct: 416 FVSICPHIALGIKTSSLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQAC 475
Query: 721 NHLGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTD-TASRNLKSRY 897
NHLGIDFTLHVL GDLAK+TKLQNYINRLYLSWVSG++IDLS+GKCT D +AS NLKSRY
Sbjct: 476 NHLGIDFTLHVLGGDLAKDTKLQNYINRLYLSWVSGNVIDLSSGKCTPDSSASSNLKSRY 535
Query: 898 QEISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKF 1077
Q+ISFPSIILLWGFPSKLKAREI+ACI QAFGP VSSVYHLDESAVF+QFSKPELVSKF
Sbjct: 536 QDISFPSIILLWGFPSKLKAREIKACITQAFGPNPVSSVYHLDESAVFIQFSKPELVSKF 595
Query: 1078 LEMKETLSRSSDPISVL 1128
LEMKETLSR+SDPISVL
Sbjct: 596 LEMKETLSRNSDPISVL 612
>ref|XP_006346129.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Solanum
tuberosum]
Length = 715
Score = 660 bits (1704), Expect = 0.0
Identities = 334/376 (88%), Positives = 356/376 (94%), Gaps = 1/376 (0%)
Frame = +1
Query: 4 SSETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEAT 183
SSE KQISTDP+QRFQMVFFKTRP LALS FTSRQLRVIKAVT+KHFKDLAYIRVAGEAT
Sbjct: 237 SSEIKQISTDPSQRFQMVFFKTRPGLALSDFTSRQLRVIKAVTKKHFKDLAYIRVAGEAT 296
Query: 184 SPQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCF 363
SPQQLIVYTDSN DRDL MKEVKDGL KEAE+KV+SAVGFRHVIDLLSSERKLIVGHNCF
Sbjct: 297 SPQQLIVYTDSNYDRDLLMKEVKDGLRKEAEMKVESAVGFRHVIDLLSSERKLIVGHNCF 356
Query: 364 LDMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAF 543
LD+AH+YSKFIGPLPSTAED VSS+QK FP I+DTKILLNA+GVF++ +NKS+TSLSRAF
Sbjct: 357 LDVAHMYSKFIGPLPSTAEDYVSSLQKLFPTIVDTKILLNANGVFRQTLNKSNTSLSRAF 416
Query: 544 VSICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACN 723
VSICP IALG+KTS LADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACN
Sbjct: 417 VSICPHIALGIKTSSLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACN 476
Query: 724 HLGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTD-TASRNLKSRYQ 900
HLGIDFTLHVL GDLAKETKLQNYINRLYLSWVSG++IDLS+GKCT D +AS NLKSRYQ
Sbjct: 477 HLGIDFTLHVLGGDLAKETKLQNYINRLYLSWVSGNVIDLSSGKCTPDSSASSNLKSRYQ 536
Query: 901 EISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFL 1080
+ISFPSIILLWG PSKLKAREIRA I QAFGP SVSSVYHLDESAVF+QFSKPELVSKFL
Sbjct: 537 DISFPSIILLWGLPSKLKAREIRAYIAQAFGPNSVSSVYHLDESAVFIQFSKPELVSKFL 596
Query: 1081 EMKETLSRSSDPISVL 1128
E+KETLSR+SDPISVL
Sbjct: 597 ELKETLSRNSDPISVL 612
>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
Length = 715
Score = 487 bits (1254), Expect = e-135
Identities = 241/375 (64%), Positives = 299/375 (79%), Gaps = 1/375 (0%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
S+ + S D Q+FQ +FFK RPAL L+GFT+ QLR+I+ V +KHFKDL YIR +G+ S
Sbjct: 239 SQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQLRLIQLVIKKHFKDLVYIRSSGDG-S 297
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
+LIVY DS++D++L MKEVKDGL +EAE+K+K+AVGFRHVIDLLSSE+KLIVGHNC L
Sbjct: 298 YSELIVYIDSDNDKNLLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLL 357
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIY+KF GPLP TAED VSSI KYFP++IDTKILLN + V + ++ STSLS+AF
Sbjct: 358 DIAHIYNKFFGPLPLTAEDFVSSIHKYFPYMIDTKILLNTNNVLKHLMKNGSTSLSKAFA 417
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
S+CPQIA K SGLA +P VEVEVQVD+ RSSNWNSGAKHEAGYDAFMTGC+FAQAC++
Sbjct: 418 SLCPQIASSSKNSGLAFQPWVEVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSN 477
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTG-KCTTDTASRNLKSRYQE 903
LGIDF H + +LA LQ ++N LY SWV+GDIIDL TG + T NLK RY +
Sbjct: 478 LGIDFKKHSSSANLAHNKNLQKHVNHLYFSWVNGDIIDLGTGNRIAATTVCYNLKRRYPK 537
Query: 904 ISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLE 1083
I F +I+++WGFPS+L +++IR CI +AFGP SV+++YHLDE+AVFVQFSKPELV+ FL
Sbjct: 538 ILFSNIVIVWGFPSQLSSKKIRECISKAFGPISVTTIYHLDETAVFVQFSKPELVADFLV 597
Query: 1084 MKETLSRSSDPISVL 1128
+KETL DPISVL
Sbjct: 598 LKETLETIQDPISVL 612
>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
Length = 734
Score = 487 bits (1254), Expect = e-135
Identities = 241/375 (64%), Positives = 299/375 (79%), Gaps = 1/375 (0%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
S+ + S D Q+FQ +FFK RPAL L+GFT+ QLR+I+ V +KHFKDL YIR +G+ S
Sbjct: 239 SQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQLRLIQLVIKKHFKDLVYIRSSGDG-S 297
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
+LIVY DS++D++L MKEVKDGL +EAE+K+K+AVGFRHVIDLLSSE+KLIVGHNC L
Sbjct: 298 YSELIVYIDSDNDKNLLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLL 357
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIY+KF GPLP TAED VSSI KYFP++IDTKILLN + V + ++ STSLS+AF
Sbjct: 358 DIAHIYNKFFGPLPLTAEDFVSSIHKYFPYMIDTKILLNTNNVLKHLMKNGSTSLSKAFA 417
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
S+CPQIA K SGLA +P VEVEVQVD+ RSSNWNSGAKHEAGYDAFMTGC+FAQAC++
Sbjct: 418 SLCPQIASSSKNSGLAFQPWVEVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSN 477
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTG-KCTTDTASRNLKSRYQE 903
LGIDF H + +LA LQ ++N LY SWV+GDIIDL TG + T NLK RY +
Sbjct: 478 LGIDFKKHSSSANLAHNKNLQKHVNHLYFSWVNGDIIDLGTGNRIAATTVCYNLKRRYPK 537
Query: 904 ISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLE 1083
I F +I+++WGFPS+L +++IR CI +AFGP SV+++YHLDE+AVFVQFSKPELV+ FL
Sbjct: 538 ILFSNIVIVWGFPSQLSSKKIRECISKAFGPISVTTIYHLDETAVFVQFSKPELVADFLV 597
Query: 1084 MKETLSRSSDPISVL 1128
+KETL DPISVL
Sbjct: 598 LKETLETIQDPISVL 612
>gb|EMJ08336.1| hypothetical protein PRUPE_ppa002362mg [Prunus persica]
Length = 682
Score = 483 bits (1242), Expect = e-134
Identities = 239/369 (64%), Positives = 296/369 (80%), Gaps = 1/369 (0%)
Frame = +1
Query: 25 STDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIV 204
S D Q+ +++FFK RPAL+LSGFTS QLR+I V R+HF+DLAY+++ GE T Q+L+V
Sbjct: 238 SNDSQQQLRIIFFKMRPALSLSGFTSHQLRLIHLVIRRHFQDLAYVQINGEKTCQQRLVV 297
Query: 205 YTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIY 384
TDS DDR+L MKEVKD ++AE+KV++AVGFRHVIDLLSSE+KLIVGHNCFLD+AHIY
Sbjct: 298 RTDSKDDRELLMKEVKDEHCRQAEVKVQAAVGFRHVIDLLSSEQKLIVGHNCFLDIAHIY 357
Query: 385 SKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQI 564
SKF+GPLPSTAE+ VSS+ K FP+++DTK+LLNA+ V Q+ + KS TSLS AF +CPQI
Sbjct: 358 SKFVGPLPSTAEEFVSSVNKCFPYVVDTKMLLNANNVLQQRMKKSQTSLSSAFAMLCPQI 417
Query: 565 ALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFT 744
ALG K++ LA + CV+VEVQVD+ RSSNWNSGAKHEAGYDAFMTGC+FAQ C+HLGIDF
Sbjct: 418 ALGKKSTDLAFQSCVKVEVQVDDLRSSNWNSGAKHEAGYDAFMTGCVFAQTCSHLGIDFQ 477
Query: 745 LHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTG-KCTTDTASRNLKSRYQEISFPSI 921
+ + LA KLQ +IN LYLSW + DIIDL++G K N K RY EI F +I
Sbjct: 478 SFLPSEHLAHNEKLQKHINLLYLSWSNRDIIDLTSGKKNAVSLGYTNHKKRYPEILFENI 537
Query: 922 ILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLS 1101
L+WGFPSKLKAR+IR CI + FGPTSV+S+YHLDE+AVFVQF+K + VS+FL +KETL
Sbjct: 538 ALIWGFPSKLKARDIRECISKVFGPTSVTSIYHLDETAVFVQFNKEKFVSEFLILKETLE 597
Query: 1102 RSSDPISVL 1128
RS P+SVL
Sbjct: 598 RSDGPVSVL 606
>ref|XP_004296331.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Fragaria vesca
subsp. vesca]
Length = 717
Score = 470 bits (1210), Expect = e-130
Identities = 232/374 (62%), Positives = 294/374 (78%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
S+ + IS D Q + +FFK PAL+L+GFTS QLR+I+ V R+HF+DL+Y++V GE +
Sbjct: 226 SKFQGISNDRQQHLETIFFKMCPALSLNGFTSHQLRLIQLVIRRHFQDLSYVQVNGENSC 285
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
Q L+V+TDS DDR+ MKEVKD ++AE KV++AVGFRHVIDLLSSE+KLIVGHNCFL
Sbjct: 286 QQHLVVHTDSEDDRESLMKEVKDEHLRQAESKVQAAVGFRHVIDLLSSEKKLIVGHNCFL 345
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIYSKF+GPLPSTAE+ VSS+ ++FP IIDTK+LLNA+ V Q+ + KS TSLS AF
Sbjct: 346 DIAHIYSKFVGPLPSTAEEFVSSVNEWFPHIIDTKLLLNANTVLQQRMKKSQTSLSSAFA 405
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
S+CPQ++LG K++ LA + CV+VEVQVD+ RSSNWNSGAKHEAGYDAFMTGC+FAQAC H
Sbjct: 406 SLCPQMSLGAKSTDLAFQLCVKVEVQVDDLRSSNWNSGAKHEAGYDAFMTGCVFAQACGH 465
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRNLKSRYQEI 906
LGIDF + + LA KL+ +IN L+LSW GD+IDL+TG + K RY EI
Sbjct: 466 LGIDFEACLPSEKLAHNEKLKQHINLLFLSWNKGDVIDLTTGNKNAMSVGSKKKQRYSEI 525
Query: 907 SFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEM 1086
SF I L+WGF SK+KA+EIR CI + FGP+SV S+YHLDESAVFVQF K +LVS FL +
Sbjct: 526 SFEKIALIWGFSSKVKAQEIRECISKVFGPSSVVSIYHLDESAVFVQFKKQKLVSDFLSL 585
Query: 1087 KETLSRSSDPISVL 1128
K+TL R++ P++VL
Sbjct: 586 KDTLERNNGPVAVL 599
>ref|XP_006474883.1| PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X1 [Citrus
sinensis]
Length = 711
Score = 470 bits (1209), Expect = e-130
Identities = 229/375 (61%), Positives = 300/375 (80%), Gaps = 1/375 (0%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
SE + D Q+F+ +FFK RPA++L+GFTS QLR+I+ V RKHFKDLAY+RV+GE +
Sbjct: 226 SEVQPSFNDSKQQFETIFFKMRPAISLNGFTSHQLRLIQLVVRKHFKDLAYLRVSGENSC 285
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
Q +IVY +S + + MKEVKD +AE+ +K+++GFRHVIDLLSSE+KLIVGHNCFL
Sbjct: 286 SQNVIVYIESESVKKMLMKEVKDEQKIDAEMSIKASIGFRHVIDLLSSEKKLIVGHNCFL 345
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIYSKF GPLP TAE+ +SS+ KYFP IIDTKILLN++ + Q+ + KSSTSLS+AF
Sbjct: 346 DIAHIYSKFFGPLPLTAEEFISSVNKYFPHIIDTKILLNSNSILQQRMKKSSTSLSKAFS 405
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
+CPQIALG K++ L+ +P V+VEV+VD+ RSSNWNSG KHEAGYDAFMTGC+FAQAC+H
Sbjct: 406 VLCPQIALGSKSTHLSLQPSVKVEVEVDDIRSSNWNSGVKHEAGYDAFMTGCVFAQACSH 465
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDT-ASRNLKSRYQE 903
LGIDF + +LA KL+ ++N LYLSW +G+II+LSTG T+++ AS K+ Y +
Sbjct: 466 LGIDFKQQSSSENLAHNEKLREHVNLLYLSWTNGEIINLSTGNRTSESLASNKRKNHYPK 525
Query: 904 ISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLE 1083
I F I+++WGFPS LKA +IR CI + +GPTSV SVYH+DE+AVFVQFS+ E+VSKFL+
Sbjct: 526 ILFECIVIVWGFPSHLKAWDIRECISKVYGPTSVISVYHVDETAVFVQFSRAEMVSKFLD 585
Query: 1084 MKETLSRSSDPISVL 1128
+KE+L R++DPISVL
Sbjct: 586 LKESLDRNNDPISVL 600
>ref|XP_006452603.1| hypothetical protein CICLE_v10007611mg [Citrus clementina]
gi|557555829|gb|ESR65843.1| hypothetical protein
CICLE_v10007611mg [Citrus clementina]
Length = 505
Score = 469 bits (1207), Expect = e-130
Identities = 229/375 (61%), Positives = 299/375 (79%), Gaps = 1/375 (0%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
SE + D Q+F+ +FFK RPA++L+GFTS QL +I+ V RKHFKDLAY+RV+GE +
Sbjct: 20 SEVQPSFNDSKQQFETIFFKMRPAISLNGFTSHQLLLIQLVVRKHFKDLAYLRVSGENSC 79
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
Q +IVY +S D+ + MKEVKD +AE+ +K+++GFRHVIDLLSSE+KLIVGHNCFL
Sbjct: 80 SQNVIVYIESESDKKMLMKEVKDEQKIDAEMSIKASIGFRHVIDLLSSEKKLIVGHNCFL 139
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIYSKF GPLP TAE+ +SS+ KYFP IIDTKILLN++ + Q+ + KSSTSLS+AF
Sbjct: 140 DIAHIYSKFFGPLPLTAEEFISSVNKYFPHIIDTKILLNSNSILQQRMKKSSTSLSKAFS 199
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
+CPQIALG K++ LA +P V+VEV+VD+ RSSNWNSG KHEAGYDAFMTGC+FAQAC+H
Sbjct: 200 VLCPQIALGSKSTHLALQPSVKVEVEVDDIRSSNWNSGVKHEAGYDAFMTGCVFAQACSH 259
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDT-ASRNLKSRYQE 903
LGIDF + +LA KL+ ++N LYLSW +G+II+LSTG T+++ AS K+ Y +
Sbjct: 260 LGIDFKQQSSSENLAHNEKLREHVNLLYLSWTNGEIINLSTGNRTSESLASNKRKNHYPK 319
Query: 904 ISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLE 1083
I F I+++WGFPS LKA +IR CI + +GPTSV SVYH+DE+AVFVQFS+ E+VSKFL+
Sbjct: 320 ILFECIVIVWGFPSHLKAWDIRECISKVYGPTSVISVYHVDETAVFVQFSRAEMVSKFLD 379
Query: 1084 MKETLSRSSDPISVL 1128
+K +L R++DPISVL
Sbjct: 380 LKGSLDRNNDPISVL 394
>ref|XP_006452602.1| hypothetical protein CICLE_v10007611mg [Citrus clementina]
gi|557555828|gb|ESR65842.1| hypothetical protein
CICLE_v10007611mg [Citrus clementina]
Length = 711
Score = 469 bits (1207), Expect = e-130
Identities = 229/375 (61%), Positives = 299/375 (79%), Gaps = 1/375 (0%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
SE + D Q+F+ +FFK RPA++L+GFTS QL +I+ V RKHFKDLAY+RV+GE +
Sbjct: 226 SEVQPSFNDSKQQFETIFFKMRPAISLNGFTSHQLLLIQLVVRKHFKDLAYLRVSGENSC 285
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
Q +IVY +S D+ + MKEVKD +AE+ +K+++GFRHVIDLLSSE+KLIVGHNCFL
Sbjct: 286 SQNVIVYIESESDKKMLMKEVKDEQKIDAEMSIKASIGFRHVIDLLSSEKKLIVGHNCFL 345
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIYSKF GPLP TAE+ +SS+ KYFP IIDTKILLN++ + Q+ + KSSTSLS+AF
Sbjct: 346 DIAHIYSKFFGPLPLTAEEFISSVNKYFPHIIDTKILLNSNSILQQRMKKSSTSLSKAFS 405
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
+CPQIALG K++ LA +P V+VEV+VD+ RSSNWNSG KHEAGYDAFMTGC+FAQAC+H
Sbjct: 406 VLCPQIALGSKSTHLALQPSVKVEVEVDDIRSSNWNSGVKHEAGYDAFMTGCVFAQACSH 465
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDT-ASRNLKSRYQE 903
LGIDF + +LA KL+ ++N LYLSW +G+II+LSTG T+++ AS K+ Y +
Sbjct: 466 LGIDFKQQSSSENLAHNEKLREHVNLLYLSWTNGEIINLSTGNRTSESLASNKRKNHYPK 525
Query: 904 ISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLE 1083
I F I+++WGFPS LKA +IR CI + +GPTSV SVYH+DE+AVFVQFS+ E+VSKFL+
Sbjct: 526 ILFECIVIVWGFPSHLKAWDIRECISKVYGPTSVISVYHVDETAVFVQFSRAEMVSKFLD 585
Query: 1084 MKETLSRSSDPISVL 1128
+K +L R++DPISVL
Sbjct: 586 LKGSLDRNNDPISVL 600
>emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]
Length = 720
Score = 468 bits (1204), Expect = e-129
Identities = 232/359 (64%), Positives = 287/359 (79%), Gaps = 1/359 (0%)
Frame = +1
Query: 7 SETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATS 186
S+ + S D Q+FQ +FFK RPAL L+GFT+ QLR+I+ V +KHFKDL YIR +G+ S
Sbjct: 239 SQFLETSNDMKQQFQTIFFKMRPALILNGFTAHQLRLIQLVIKKHFKDLVYIRSSGDG-S 297
Query: 187 PQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFL 366
+LIVY DS++D++L MKEVKDGL +EAE+K+K+AVGFRHVIDLLSSE+KLIVGHNC L
Sbjct: 298 YSELIVYIDSDNDKNLLMKEVKDGLRREAEMKIKTAVGFRHVIDLLSSEQKLIVGHNCLL 357
Query: 367 DMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFV 546
D+AHIY+KF GPLP TAED VSSI KYFP++IDTKILLN + V + ++ STSLS+AF
Sbjct: 358 DIAHIYNKFFGPLPLTAEDFVSSIHKYFPYMIDTKILLNTNNVLKHLMKNGSTSLSKAFS 417
Query: 547 SICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNH 726
S+CPQIA K SGLA +P VEVEVQVD+ RSSNWNSGAKHEAGYDAFMTGC+FAQAC++
Sbjct: 418 SLCPQIASSSKNSGLAFKPWVEVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSN 477
Query: 727 LGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTA-SRNLKSRYQE 903
LGIDF H + +LA LQ ++N LY SWV+GDIIDLSTG TA NLK RY +
Sbjct: 478 LGIDFKKHSSSANLAHNKNLQKHVNHLYFSWVNGDIIDLSTGNRIAATAVCYNLKRRYPK 537
Query: 904 ISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFL 1080
I F +I+++WGFPS+L +++IR CI + FGP SV+ +YHLDE+AVFVQFSKPELV+ FL
Sbjct: 538 ILFSNIVIVWGFPSQLSSKKIRECISKVFGPISVTMIYHLDETAVFVQFSKPELVADFL 596
>gb|EOY12009.1| Poly(A)-specific ribonuclease PARN isoform 1 [Theobroma cacao]
gi|508720113|gb|EOY12010.1| Poly(A)-specific ribonuclease
PARN isoform 1 [Theobroma cacao]
Length = 726
Score = 456 bits (1173), Expect = e-126
Identities = 225/369 (60%), Positives = 287/369 (77%), Gaps = 1/369 (0%)
Frame = +1
Query: 25 STDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIV 204
S D NQ+FQ VFFK RPAL+L+GFTS QL +I+ VTRKHFKDL Y+R GE++S Q+L+V
Sbjct: 243 SNDLNQQFQTVFFKMRPALSLNGFTSHQLSLIRMVTRKHFKDLVYVRFNGESSS-QELVV 301
Query: 205 YTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIY 384
+TDS D+D ++EVK+ ++ AE+++ +AVGFRHVIDLLSSE KLIVGHNC LD+AHI+
Sbjct: 302 FTDSESDKDRLVEEVKNEHYRRAEMRIHAAVGFRHVIDLLSSENKLIVGHNCILDIAHIH 361
Query: 385 SKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQI 564
SKF+GPLP TAE+ VS + KYFP IIDTKILLNA + Q+ + KSSTSLS AF +CP++
Sbjct: 362 SKFLGPLPLTAEEFVSCVNKYFPNIIDTKILLNADNILQQRMKKSSTSLSSAFSLLCPEL 421
Query: 565 ALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFT 744
A G K+ + +PCV+VEV VDE RS +WNSGAKHEAGYDAFMTGC+FAQ C+HLGIDF
Sbjct: 422 AHGFKSKVQSSQPCVKVEVHVDEMRSPDWNSGAKHEAGYDAFMTGCVFAQVCSHLGIDFQ 481
Query: 745 LHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRN-LKSRYQEISFPSI 921
L+ + +L + KLQ ++N LYLSW++GD+IDL TG T + N L+ R+ I + +I
Sbjct: 482 LYSTSENLVQNEKLQKHMNLLYLSWINGDVIDLRTGSRTAEFLGSNILRKRFPRILYENI 541
Query: 922 ILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLS 1101
+L+WGFPSKLK IR CI + GPTSV S+Y +D++AVFVQFSK ELVS FL +KE+L
Sbjct: 542 VLIWGFPSKLKPSVIRECICKTLGPTSVISIYRMDQTAVFVQFSKAELVSDFLILKESLE 601
Query: 1102 RSSDPISVL 1128
RS D ISVL
Sbjct: 602 RSDDAISVL 610
>ref|XP_002522771.1| conserved hypothetical protein [Ricinus communis]
gi|223538009|gb|EEF39622.1| conserved hypothetical
protein [Ricinus communis]
Length = 699
Score = 453 bits (1165), Expect = e-125
Identities = 228/366 (62%), Positives = 287/366 (78%), Gaps = 2/366 (0%)
Frame = +1
Query: 37 NQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYTDS 216
+ +FQ +F+K RPAL LSGFTS QL++I+ VTRKHF++LAY+ G+++S Q+L+VY DS
Sbjct: 218 DSQFQTIFYKMRPALCLSGFTSHQLKLIQLVTRKHFENLAYVG-CGQSSSLQELVVYIDS 276
Query: 217 NDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSKFI 396
+D+DL MKEVKD K AE+K+K+A+GFRHVIDLLSS +KLIVGHNCFLD+AHI+SKF+
Sbjct: 277 ENDKDLLMKEVKDEYRKGAEMKIKNAIGFRHVIDLLSSAQKLIVGHNCFLDIAHIHSKFL 336
Query: 397 GPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIALGV 576
GPLP TAE+ VS++ KYFP IIDTKILLNA+ V + + KS TSLS AF +CPQ+A
Sbjct: 337 GPLPPTAEEFVSAVNKYFPHIIDTKILLNANNVLLQRMKKSGTSLSAAFSLLCPQLATSS 396
Query: 577 -KTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHV 753
K A RPCV VEVQVD+ RSSNW+SG KHEAGYDAFMTGC+FAQACNHLG+DF L
Sbjct: 397 NKGINWASRPCVNVEVQVDDTRSSNWSSGVKHEAGYDAFMTGCVFAQACNHLGVDFKLKS 456
Query: 754 LAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRN-LKSRYQEISFPSIILL 930
+ +LA KLQ IN LY+SW++ DIIDL TG ++ N L+ + I F +I+L+
Sbjct: 457 SSENLAHNEKLQKLINLLYISWINWDIIDLRTGNRVAESLGFNYLRKQRPNILFKNIVLI 516
Query: 931 WGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSRSS 1110
W FPS+LKA EIR CI +AFG SV+S+YH+DE+AVFVQFSK ELVS+FL +KE+L RS+
Sbjct: 517 WRFPSRLKAGEIRECICKAFGLNSVTSIYHVDETAVFVQFSKAELVSEFLVLKESLDRSN 576
Query: 1111 DPISVL 1128
DPISVL
Sbjct: 577 DPISVL 582
>ref|XP_004516095.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cicer arietinum]
Length = 721
Score = 451 bits (1160), Expect = e-124
Identities = 224/367 (61%), Positives = 278/367 (75%), Gaps = 1/367 (0%)
Frame = +1
Query: 31 DPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYT 210
D Q+FQ++FFKT PAL L GFTSRQL++I+ V +KHFKDL+YI V EA+ QQ++VYT
Sbjct: 243 DSKQQFQVIFFKTHPALKLDGFTSRQLKLIQLVIKKHFKDLSYINVNREASGLQQIVVYT 302
Query: 211 DSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSK 390
DS D+ +L +KEVK+ H+ E+K+++A+GFRHVID+LSSE+KLIVGHNCFLDMAH+YSK
Sbjct: 303 DSADELNLLLKEVKEENHRAKEMKIQAAIGFRHVIDVLSSEQKLIVGHNCFLDMAHVYSK 362
Query: 391 FIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIAL 570
FIGPLP T E+ V+S+ K FP IIDTKILLN + + Q+ + KS SL+ AF CP IA
Sbjct: 363 FIGPLPGTPEEFVASVNKCFPHIIDTKILLNTNYMLQERMKKSRKSLASAFSMFCPLIAA 422
Query: 571 GVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLH 750
G ++GL V+V ++VD+ RSS+WN G KHEAGYDAFMTGCIFAQ C+ LG+DF LH
Sbjct: 423 GSNSTGLISASLVKVNIEVDDSRSSSWNPGGKHEAGYDAFMTGCIFAQLCSDLGVDFKLH 482
Query: 751 VLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTG-KCTTDTASRNLKSRYQEISFPSIIL 927
+ LA KLQNYIN LYLSW+ GDIIDL+TG K S NLK RY I F +I++
Sbjct: 483 ESSKQLASNEKLQNYINHLYLSWLHGDIIDLNTGDKVANTLPSYNLKKRYPNILFENIVI 542
Query: 928 LWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSRS 1107
+WGFP+KLKA E+R CI + FG TSV SVYHLD +AVFVQFSK ELVS FL +KE L S
Sbjct: 543 IWGFPTKLKANEVRECISKVFGLTSVVSVYHLDATAVFVQFSKTELVSDFLLLKEKLETS 602
Query: 1108 SDPISVL 1128
+ PI VL
Sbjct: 603 NGPILVL 609
>ref|XP_002300380.2| CAF1 family ribonuclease family protein [Populus trichocarpa]
gi|550349121|gb|EEE85185.2| CAF1 family ribonuclease
family protein [Populus trichocarpa]
Length = 674
Score = 446 bits (1146), Expect = e-122
Identities = 227/368 (61%), Positives = 286/368 (77%), Gaps = 2/368 (0%)
Frame = +1
Query: 31 DPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYT 210
D NQ+FQ +F+K RPAL+L+GFTSRQLR+I++VT+KHFKDLA +RV GE++ QQL+VYT
Sbjct: 229 DSNQQFQNIFYKMRPALSLNGFTSRQLRLIQSVTKKHFKDLASVRVEGESSCSQQLVVYT 288
Query: 211 DSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSK 390
DS DRDL KEV D ++AE+K+K+A+GFRHVIDLLSSE+KLIVGHNCFLD+AHI+SK
Sbjct: 289 DSESDRDLLKKEVMDDYRRQAEMKIKAAIGFRHVIDLLSSEKKLIVGHNCFLDLAHIHSK 348
Query: 391 FIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIAL 570
F+GPLP AE+ V S+ K FP+IIDTKILLN + + ++ + KS TSLS AF+S+CPQIA
Sbjct: 349 FLGPLPLEAEEFVYSVNKCFPYIIDTKILLNTNNILKQRMKKSKTSLSSAFLSLCPQIAF 408
Query: 571 GVKTS-GLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTL 747
S L V+VEVQVD+ RSS+W SG KHEAGYDAFMTGC+FAQACN LGIDF L
Sbjct: 409 ASNESCNLTFSSSVKVEVQVDDTRSSSWISGVKHEAGYDAFMTGCVFAQACNLLGIDFKL 468
Query: 748 HVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDT-ASRNLKSRYQEISFPSII 924
+ + +LA +LQ + N LYLSW++GDIIDLSTG T ++ R+LK I F +I+
Sbjct: 469 YSPSENLACNERLQKHANLLYLSWINGDIIDLSTGHRTAESLRCRDLKKSQTGILFENIV 528
Query: 925 LLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSR 1104
L+WGFPSKLK I+ I + FGPTSV+S+ LDE+AVFVQFSK +LV+ FL +KETL R
Sbjct: 529 LIWGFPSKLKTAVIKDRISKVFGPTSVTSICRLDETAVFVQFSKLKLVADFLVVKETLER 588
Query: 1105 SSDPISVL 1128
S+D SVL
Sbjct: 589 SNDAFSVL 596
>gb|EXB36053.1| Poly(A)-specific ribonuclease PARN [Morus notabilis]
Length = 754
Score = 439 bits (1130), Expect = e-121
Identities = 221/368 (60%), Positives = 275/368 (74%)
Frame = +1
Query: 25 STDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIV 204
S D Q+FQ +FF PA+ L GFTS QLR+I+ V RK+FKDL Y+ V G+ Q L+V
Sbjct: 259 SNDSKQKFQTLFFMMWPAVNLIGFTSHQLRLIQLVVRKNFKDLTYVHVKGDNVFSQHLVV 318
Query: 205 YTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIY 384
YTDS DDRDL +KEV + K AE K+++AVGFRHV+DLLSSERKLIVGHNCFLD+AH+Y
Sbjct: 319 YTDSKDDRDLLIKEVNNEHRKRAEKKIQAAVGFRHVVDLLSSERKLIVGHNCFLDIAHVY 378
Query: 385 SKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQI 564
+KFIGPLPSTAE+ VSS+ KYFP IIDTKILLN V ++ + KS TSLS AF +CP I
Sbjct: 379 NKFIGPLPSTAEEFVSSVSKYFPHIIDTKILLNTHQVLRQRMKKSKTSLSSAFTLLCPHI 438
Query: 565 ALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFT 744
+L S A V+VEV+VD+ RSS+WNSGAKH+AGYDAFMTGCIFAQAC ++GIDF
Sbjct: 439 SL----SFAALESYVKVEVEVDDLRSSSWNSGAKHDAGYDAFMTGCIFAQACGYIGIDFK 494
Query: 745 LHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRNLKSRYQEISFPSII 924
LH + LA+ KLQ +IN LYLSW + DIIDL+ G T + + K RY + F +++
Sbjct: 495 LHSPSESLAENEKLQKHINLLYLSWTNADIIDLTNGNKVTASVEYSQKKRYSNVVFENVV 554
Query: 925 LLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSR 1104
L+WGFPS+LKAR IR C + FG TSV+ VY +D +AVFVQFSK +LVS FL + ETL +
Sbjct: 555 LIWGFPSELKARHIRECFSKTFGVTSVTFVYQMDPTAVFVQFSKTKLVSDFLSLMETLEK 614
Query: 1105 SSDPISVL 1128
++DPISVL
Sbjct: 615 NNDPISVL 622
>gb|ESW18644.1| hypothetical protein PHAVU_006G058000g [Phaseolus vulgaris]
Length = 712
Score = 432 bits (1111), Expect = e-118
Identities = 215/365 (58%), Positives = 277/365 (75%), Gaps = 1/365 (0%)
Frame = +1
Query: 37 NQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYTDS 216
+ +FQ +FF+ PAL L+GFTS QL++I+ V RKHFKDL+Y+ V EA++ QQL+VYTDS
Sbjct: 238 DSKFQEMFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSEASNLQQLVVYTDS 297
Query: 217 NDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSKFI 396
D+ + +K+VK+ H ++K+++AVG RHVIDLLSSE+KLIVGHNCFLD+AH+YSKFI
Sbjct: 298 KDELNSLLKKVKEENHGAEKMKIQAAVGLRHVIDLLSSEQKLIVGHNCFLDLAHVYSKFI 357
Query: 397 GPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIALGV 576
GPLP T E+ V+S+ K FP I+DTKILLN + + + + +S SL+ AF S CPQIA G
Sbjct: 358 GPLPDTPEEFVTSVNKCFPHIVDTKILLNTNFMLHEKMKRSRKSLAAAFTSFCPQIAAGS 417
Query: 577 KTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVL 756
+S V+VEV+VD+ RSS+WN G KHEAGYDAFMTGCIFAQ C+ LGID+ LH
Sbjct: 418 TSSYPGSLSHVKVEVEVDDVRSSSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDYKLHDS 477
Query: 757 AGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTA-SRNLKSRYQEISFPSIILLW 933
+ LA + KLQNY+NRLYLSW+ GDIIDLSTG D++ S +L+ RY +I F +I+++W
Sbjct: 478 SKQLALDEKLQNYVNRLYLSWMHGDIIDLSTGNKVGDSSPSYSLRKRYPKILFENIVIIW 537
Query: 934 GFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSRSSD 1113
GFPSKLKA E+R CI + FGPTSV SV+HLD +AVFVQFSK ELVS FL +K TL S
Sbjct: 538 GFPSKLKANEVRECISKVFGPTSVVSVFHLDATAVFVQFSKTELVSDFLSLKNTLEGSDG 597
Query: 1114 PISVL 1128
+ VL
Sbjct: 598 ALLVL 602
>ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X1
[Glycine max]
Length = 718
Score = 431 bits (1109), Expect = e-118
Identities = 213/365 (58%), Positives = 276/365 (75%), Gaps = 1/365 (0%)
Frame = +1
Query: 37 NQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYTDS 216
+ +FQ+ FF+ PAL L+GFTS QL++I+ V RKHFKDL+Y+ V E + QQL+VYTDS
Sbjct: 241 DSKFQVTFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSETSGSQQLVVYTDS 300
Query: 217 NDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSKFI 396
D+ +L +K+VK+ H+ E K+++AVGFRHVIDLLSSE+KLIVG+NCFLD+AH+YSKFI
Sbjct: 301 KDELNLLLKKVKEENHRAEEKKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFI 360
Query: 397 GPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIALGV 576
GPLP + ++ V+S+ K FP I+DT ILLN + +FQ+ + +S SL+ AF CPQIA G
Sbjct: 361 GPLPGSPDEFVASVNKCFPHIVDTIILLNTNLMFQEKMKRSRKSLASAFTLFCPQIAAGS 420
Query: 577 KTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVL 756
+++ L V+V+V+VD RS +WN G KHEAGYDAFMTGCIFAQ C+ LGIDF L
Sbjct: 421 RSTDLGSLSHVKVDVEVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDS 480
Query: 757 AGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTA-SRNLKSRYQEISFPSIILLW 933
+ LA KLQ Y+NRLYLSW+ GDIIDL+TG D++ S +LK RY I F +I+++W
Sbjct: 481 SNQLALNEKLQKYVNRLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIW 540
Query: 934 GFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSRSSD 1113
GFPSKLKA E+R CI +AFGPTSV SV+HLD +A FVQFSK ELVS FL +K++L RS
Sbjct: 541 GFPSKLKANEVRECISKAFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDG 600
Query: 1114 PISVL 1128
ISVL
Sbjct: 601 AISVL 605
>ref|XP_006602124.1| PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X4
[Glycine max]
Length = 502
Score = 430 bits (1105), Expect = e-118
Identities = 211/364 (57%), Positives = 276/364 (75%)
Frame = +1
Query: 37 NQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYTDS 216
+ +FQ+ FF+ PAL L+ FTS QL++I+ + RKHFKDL+Y+ V EA+ QQL+VYTD
Sbjct: 28 DSKFQVTFFEMHPALRLNRFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYTDL 87
Query: 217 NDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSKFI 396
D+ +L +K+VK+ H+ E+K+++AVGFRHVIDLLSSE+KLIVG+NCFLD+AH+YSKFI
Sbjct: 88 KDELNLLLKKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFI 147
Query: 397 GPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIALGV 576
GPLP T E+ V+S+ K FP I+DTKILL+ + +FQ+ + +S SL+ AF S CPQIA G
Sbjct: 148 GPLPGTPEEFVASVSKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGS 207
Query: 577 KTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVL 756
+++ L V+V V+VD+ RS +W+ G KHEAGYDAFMTGCIFAQ C+ LGIDF LH
Sbjct: 208 RSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDS 267
Query: 757 AGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRNLKSRYQEISFPSIILLWG 936
+ LA KLQ Y+NRLYLSW+ DIIDL+TG D++ R+L RY +I F +I+++WG
Sbjct: 268 SKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLRSLTKRYPKIMFENIVIIWG 327
Query: 937 FPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSRSSDP 1116
F SKLKA EIR CI + FGPTSV SV+HLD +A FVQFSK ELVS FL +K++L RS
Sbjct: 328 FSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGA 387
Query: 1117 ISVL 1128
ISVL
Sbjct: 388 ISVL 391
>ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X1
[Glycine max]
Length = 714
Score = 430 bits (1105), Expect = e-118
Identities = 211/364 (57%), Positives = 276/364 (75%)
Frame = +1
Query: 37 NQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEATSPQQLIVYTDS 216
+ +FQ+ FF+ PAL L+ FTS QL++I+ + RKHFKDL+Y+ V EA+ QQL+VYTD
Sbjct: 240 DSKFQVTFFEMHPALRLNRFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYTDL 299
Query: 217 NDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNCFLDMAHIYSKFI 396
D+ +L +K+VK+ H+ E+K+++AVGFRHVIDLLSSE+KLIVG+NCFLD+AH+YSKFI
Sbjct: 300 KDELNLLLKKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFI 359
Query: 397 GPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRAFVSICPQIALGV 576
GPLP T E+ V+S+ K FP I+DTKILL+ + +FQ+ + +S SL+ AF S CPQIA G
Sbjct: 360 GPLPGTPEEFVASVSKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGS 419
Query: 577 KTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQACNHLGIDFTLHVL 756
+++ L V+V V+VD+ RS +W+ G KHEAGYDAFMTGCIFAQ C+ LGIDF LH
Sbjct: 420 RSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDS 479
Query: 757 AGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRNLKSRYQEISFPSIILLWG 936
+ LA KLQ Y+NRLYLSW+ DIIDL+TG D++ R+L RY +I F +I+++WG
Sbjct: 480 SKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLRSLTKRYPKIMFENIVIIWG 539
Query: 937 FPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFLEMKETLSRSSDP 1116
F SKLKA EIR CI + FGPTSV SV+HLD +A FVQFSK ELVS FL +K++L RS
Sbjct: 540 FSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGA 599
Query: 1117 ISVL 1128
ISVL
Sbjct: 600 ISVL 603
>ref|NP_001077725.4| poly(A)-specific ribonuclease PARN [Arabidopsis thaliana]
gi|78484002|dbj|BAE47490.1| polyA specific ribonuclease
[Arabidopsis thaliana] gi|332195191|gb|AEE33312.1|
poly(A)-specific ribonuclease PARN [Arabidopsis thaliana]
Length = 540
Score = 418 bits (1075), Expect = e-114
Identities = 210/376 (55%), Positives = 265/376 (70%)
Frame = +1
Query: 1 SSSETKQISTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKAVTRKHFKDLAYIRVAGEA 180
+SSE +IS NQ + VF RPAL+L GFTS QLRV+ +V RKHF DL YI ++
Sbjct: 83 ASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSNDKS 142
Query: 181 TSPQQLIVYTDSNDDRDLRMKEVKDGLHKEAEIKVKSAVGFRHVIDLLSSERKLIVGHNC 360
+S + ++VYTDS+ D++ MKE KD + AE K++SA+GFR VIDLL+SE+KLIVGHNC
Sbjct: 143 SSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNC 202
Query: 361 FLDMAHIYSKFIGPLPSTAEDCVSSIQKYFPFIIDTKILLNASGVFQKMVNKSSTSLSRA 540
FLD+AH+YSKF+GPLPSTAE V+SI +FP+I+DTKILLN + + + + KSSTSLS A
Sbjct: 203 FLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTSLSSA 262
Query: 541 FVSICPQIALGVKTSGLADRPCVEVEVQVDEKRSSNWNSGAKHEAGYDAFMTGCIFAQAC 720
F S+CPQI ++S + V ++V++D R SNWN+G KHEAGYDAFMTGCIFAQAC
Sbjct: 263 FSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIFAQAC 322
Query: 721 NHLGIDFTLHVLAGDLAKETKLQNYINRLYLSWVSGDIIDLSTGKCTTDTASRNLKSRYQ 900
NHLG DF H D A+ KL+ YINRLYLSW GDIIDL TG D R
Sbjct: 323 NHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGHSNAD------NWRVS 376
Query: 901 EISFPSIILLWGFPSKLKAREIRACILQAFGPTSVSSVYHLDESAVFVQFSKPELVSKFL 1080
+ + +I+L+W FP KLKAR I+ CI +AFG SV+SVYH+D+SAVFV F ELV FL
Sbjct: 377 KFKYENIVLIWNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFL 436
Query: 1081 EMKETLSRSSDPISVL 1128
+K L S P+SVL
Sbjct: 437 ALKRQLESSDGPVSVL 452