BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00019260
         (647 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578...   225   1e-56
ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669...   213   4e-53
ref|XP_006584407.1| PREDICTED: uncharacterized protein LOC102670...   194   2e-47
ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261...   191   1e-46
ref|XP_004514168.1| PREDICTED: uncharacterized protein LOC101515...   181   1e-43
ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670...   175   9e-42
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   174   2e-41
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...   147   2e-33
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]              147   2e-33
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...   145   1e-32
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773...   139   9e-31
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777...   136   6e-30
ref|XP_004231642.1| PREDICTED: uncharacterized protein LOC101267...   135   1e-29
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   135   1e-29
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]     131   1e-28
ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group] g...   129   1e-27
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...   127   2e-27
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              127   3e-27
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...   127   3e-27
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777...   127   4e-27

>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
          Length = 614

 Score =  225 bits (573), Expect = 1e-56
 Identities = 117/194 (60%), Positives = 136/194 (70%)
 Frame = +3

Query: 66  PGILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMSHNAPDNNWYMDSGATSHMTSSQGNL 245
           P ILG RPQQAY    AP+    PTDI+  +HT+    PD NWYMD+GATSHMTS+QGNL
Sbjct: 344 PHILGTRPQQAYTT--APT----PTDIEVAMHTLGITPPDANWYMDTGATSHMTSAQGNL 397

Query: 246 SSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVRRFT 425
           +SYFN SN    I VG+GQ IPI+GYGH  LS P PP  L NVLHAPHL+KNLVS+R+FT
Sbjct: 398 TSYFNISN-KCGIMVGNGQPIPIHGYGHTKLSFPCPPLQLNNVLHAPHLVKNLVSIRKFT 456

Query: 426 TDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXXFAAVSSSLWH 605
           TDN VS+EFDPFGF VKD  TG  +MRC+S G LY               FAA++ SLWH
Sbjct: 457 TDNSVSVEFDPFGFPVKDFQTGRPVMRCESRGKLY----PITNPRAFPSTFAALAPSLWH 512

Query: 606 NRLGHPGDSILRSL 647
           +RLGHPG  +L SL
Sbjct: 513 DRLGHPGAPVLNSL 526


>ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669234 [Glycine max]
          Length = 922

 Score =  213 bits (542), Expect = 4e-53
 Identities = 118/211 (55%), Positives = 139/211 (65%), Gaps = 10/211 (4%)
 Frame = +3

Query: 21  VSPAPRGSIP-ARP-------VQPGILGARPQQAYAEHIAPSSTYAPT--DIKTVLHTMS 170
           + P P  + P ARP        QP ILG+RPQQAY        T APT  DI+  +HT+ 
Sbjct: 246 IPPCPYPTAPWARPNYQQPPHQQPSILGSRPQQAYI-------TTAPTLTDIEAAMHTLG 298

Query: 171 HNAPDNNWYMDSGATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPN 350
             +P  NWYMD+GATSHMTS+ GNL+SYFN SN +R I VG+GQ IPI+GY    L  P+
Sbjct: 299 ITSPYPNWYMDTGATSHMTSTSGNLTSYFNMSN-HRGIIVGNGQSIPIHGYSQTNLPSPH 357

Query: 351 PPFALKNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLY 530
           PP ALKNVLHAP LIKNLVSVR+FTTDN V++EFDPFGF VKD  TG  LMRC+S G LY
Sbjct: 358 PPLALKNVLHAPKLIKNLVSVRKFTTDNSVTVEFDPFGFFVKDFQTGMPLMRCESQGALY 417

Query: 531 XXXXXXXXXXXXXXXFAAVSSSLWHNRLGHP 623
                          FAA++ SLWH +LGHP
Sbjct: 418 -PITESTTPATSSSTFAALAPSLWHKQLGHP 447


>ref|XP_006584407.1| PREDICTED: uncharacterized protein LOC102670170 [Glycine max]
          Length = 466

 Score =  194 bits (493), Expect = 2e-47
 Identities = 101/189 (53%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
 Frame = +3

Query: 63  QPGILGARPQQ-AYAEHIAPSSTYAPTDIKTVLHTMSHNAPDNNWYMDSGATSHMTSSQG 239
           +P      PQQ AY      ++T  PTDI+  + T++  +PD NWYMD+GATSHM S+ G
Sbjct: 10  EPDTYNVEPQQQAYT-----ATTPTPTDIEAAMDTLNITSPDPNWYMDTGATSHMMSTSG 64

Query: 240 NLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVRR 419
           NL+SYFN +N +R IT+G+GQ IPI GYG + L  P+PP ALKN LHA  LIKNLVSVR+
Sbjct: 65  NLTSYFNMNN-HRGITIGNGQSIPIRGYGQINLPSPHPPLALKNSLHASKLIKNLVSVRK 123

Query: 420 FTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXXFAAVSSSL 599
           FTTDN V++EFD FGF VKD  TG  LMRC+S  D+                FAA++ SL
Sbjct: 124 FTTDNSVTVEFDSFGFFVKDFQTGMPLMRCESR-DVLNPIIESTTPATSSSTFAALAPSL 182

Query: 600 WHNRLGHPG 626
           WH +LGHPG
Sbjct: 183 WHEQLGHPG 191


>ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261089 [Solanum
           lycopersicum]
          Length = 1140

 Score =  191 bits (486), Expect = 1e-46
 Identities = 105/166 (63%), Positives = 124/166 (74%), Gaps = 6/166 (3%)
 Frame = +3

Query: 51  ARPVQP---GILGARPQQAYAEHIAPSST--YAPTDIKTVLHTMSHNAPDNNWYMDSGAT 215
           ARP QP   GILG+RP QAY    APSS   Y PT+I+  +HTMS   P  N+YMD+GAT
Sbjct: 295 ARPYQPPSRGILGSRPNQAYFSS-APSSYPGYVPTNIEQAMHTMSLTDP--NYYMDTGAT 351

Query: 216 SHMTSSQGNLSSYFNTSN-LNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHL 392
           SHMT+SQGNLS YFN SN +N  ITVG+G  IPI GYGH  L+       LKNVLH P +
Sbjct: 352 SHMTNSQGNLSPYFNLSNHVNNAITVGNGSKIPIKGYGHECLNQNT--LQLKNVLHVPKI 409

Query: 393 IKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLY 530
           IKNL+SVR+FTTDN VS+EFDPFGFSVKDL TG+ ++RC+S+GDLY
Sbjct: 410 IKNLISVRKFTTDNHVSVEFDPFGFSVKDLQTGSKIVRCNSSGDLY 455


>ref|XP_004514168.1| PREDICTED: uncharacterized protein LOC101515410 [Cicer arietinum]
          Length = 909

 Score =  181 bits (460), Expect = 1e-43
 Identities = 92/141 (65%), Positives = 104/141 (73%)
 Frame = +3

Query: 57   PVQPGILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMSHNAPDNNWYMDSGATSHMTSSQ 236
            P Q G+LG  PQ AYA   A + + APT+I+  +HTMS N PD  WYMD GATSHMT+SQ
Sbjct: 772  PKQQGLLGPHPQ-AYA---ASTPSLAPTNIEAAMHTMSLNPPDGQWYMDIGATSHMTASQ 827

Query: 237  GNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVR 416
            GNLSSY N SN N+ I VGSGQ IPI GYGH TLS P  P  L+NVLHAP +IKNL+ VR
Sbjct: 828  GNLSSYSNMSNSNQHIIVGSGQQIPIRGYGHSTLSTPTKPLKLQNVLHAPQIIKNLIYVR 887

Query: 417  RFTTDNKVSLEFDPFGFSVKD 479
            R TTDN VS+ FDPFGFSV D
Sbjct: 888  RLTTDNNVSIAFDPFGFSVND 908



 Score =  180 bits (457), Expect = 3e-43
 Identities = 92/148 (62%), Positives = 107/148 (72%)
 Frame = +3

Query: 57  PVQPGILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMSHNAPDNNWYMDSGATSHMTSSQ 236
           P Q G+LG  PQ AYA   A + + APT+I+  +HTMS N PD  WYMD GATSHMT+SQ
Sbjct: 325 PKQQGLLGPHPQ-AYA---ASTPSLAPTNIEAAMHTMSLNPPDGQWYMDIGATSHMTASQ 380

Query: 237 GNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVR 416
           GNLSSY N SN N+ I VGSGQ IPI GYGH TLS P  P  L+NVLHAP +IKNL+ VR
Sbjct: 381 GNLSSYSNMSNSNQHIIVGSGQQIPIRGYGHSTLSTPTKPLKLQNVLHAPQIIKNLIYVR 440

Query: 417 RFTTDNKVSLEFDPFGFSVKDLVTGTHL 500
           R TTDN VS+ FDPFGFS    +T T++
Sbjct: 441 RLTTDNNVSIAFDPFGFSCHPALTVTNI 468


>ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670172 [Glycine max]
          Length = 363

 Score =  175 bits (444), Expect = 9e-42
 Identities = 93/155 (60%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
 Frame = +3

Query: 18  PVSPAPRGSIPARP-VQPGILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMSHNAPDNNW 194
           P +P  R +    P  QPGILG+RPQQAY    AP+ T    DI+  +HT+   +P+ NW
Sbjct: 214 PAAPWVRPNYQQPPRQQPGILGSRPQQAYTA-TAPTRT----DIEAAMHTLGITSPNPNW 268

Query: 195 YMDSGATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNV 374
           YMD+ ATSHMTS+  NL+SYFN SN +R ITVG+GQ IPI+GYG   L  P+P  ALKNV
Sbjct: 269 YMDTSATSHMTSTSNNLTSYFNMSN-HRGITVGNGQSIPIHGYGQTNLPSPHPSLALKNV 327

Query: 375 LHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKD 479
           LHAP LIKNLV VR+FTTDN V++EFD FGFSVKD
Sbjct: 328 LHAPKLIKNLVLVRKFTTDNSVTVEFDSFGFSVKD 362


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  174 bits (442), Expect = 2e-41
 Identities = 97/210 (46%), Positives = 123/210 (58%), Gaps = 10/210 (4%)
 Frame = +3

Query: 48  PARPVQPGILGARPQQ-AYAEHIA-------PSSTYA--PTDIKTVLHTMSHNAPDNNWY 197
           P     PGILG  P Q  +A H+A       PS+  +  P  +    +TM+   PD NWY
Sbjct: 304 PTNAAHPGILGPHPSQPTHAAHMANVYPYPTPSAPMSQLPPGLIHAFNTMTLQEPDPNWY 363

Query: 198 MDSGATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVL 377
           MDS ATSH+TS+ GNL S FNTS +   +TVG+G   P+   GH TLS P+  F+L+NVL
Sbjct: 364 MDSAATSHITSNIGNLQSTFNTSTMPL-VTVGNGSLAPVETIGHGTLSYPSRSFSLRNVL 422

Query: 378 HAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXX 557
             P ++KNLVSVR+F TDN  ++EFDPFGFSVKDL T   L+RCDS+G LY         
Sbjct: 423 VCPAIVKNLVSVRKFVTDNWCTIEFDPFGFSVKDLKTRNKLLRCDSSGPLYSVTPSSYPS 482

Query: 558 XXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
                      S +WH RLGHP  ++L  L
Sbjct: 483 SHHALAATTSDSFIWHRRLGHPSSTLLSHL 512


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score =  147 bits (372), Expect = 2e-33
 Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
 Frame = +3

Query: 69  GILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMS-HNAPDNNWYMDSGATSHMTSSQGNL 245
           G+L     Q    H       +  D+    +T S  + PD+ WYMDSGAT+++TS  GN 
Sbjct: 240 GLLPPYHSQQSNAHFRTPKPESTADLAEAFNTFSLQDPPDSQWYMDSGATAYLTSGAGNN 299

Query: 246 SSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVRRFT 425
                  ++ + +  G+G  IP+   G + ++    P  L NVL  P +IKNLVSVRRFT
Sbjct: 300 LQLSLYPSIGKSVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFT 359

Query: 426 TDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXXFAAVSSSLWH 605
            DNK S+EFDPFGFS+KDL T   L+R DS+GDLY               F A SS +WH
Sbjct: 360 KDNKCSIEFDPFGFSIKDLRTKRTLLRNDSSGDLYPVFPAFNKTSAPASTFLAQSSDIWH 419

Query: 606 NRLGHPGDSILRSL 647
            RL HP + +L++L
Sbjct: 420 RRLPHPSNDVLKTL 433


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score =  147 bits (372), Expect = 2e-33
 Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
 Frame = +3

Query: 69  GILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMS-HNAPDNNWYMDSGATSHMTSSQGNL 245
           G+L     Q    H       +  D+    +T S  + PD+ WYMDSGAT+++TS  GN 
Sbjct: 236 GLLPPYHSQQSNAHFRTPKPESTADLAEAFNTFSLQDPPDSQWYMDSGATAYLTSGAGNN 295

Query: 246 SSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVRRFT 425
                  ++ + +  G+G  IP+   G + ++    P  L NVL  P +IKNLVSVRRFT
Sbjct: 296 LQLSLYPSIGKSVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFT 355

Query: 426 TDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXXFAAVSSSLWH 605
            DNK S+EFDPFGFS+KDL T   L+R DS+GDLY               F A SS +WH
Sbjct: 356 KDNKCSIEFDPFGFSIKDLRTKRTLLRNDSSGDLYPVFPAFNKTSAPASTFLAQSSDIWH 415

Query: 606 NRLGHPGDSILRSL 647
            RL HP + +L++L
Sbjct: 416 RRLPHPSNDVLKTL 429


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score =  145 bits (365), Expect = 1e-32
 Identities = 86/211 (40%), Positives = 114/211 (54%), Gaps = 6/211 (2%)
 Frame = +3

Query: 33  PRGSIPARPVQPGILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMSHNAP-DNNWYMDSG 209
           P   + A     G+LG+ PQ A         T  P ++     T +   P D +WYMD+G
Sbjct: 247 PMAYLTATNPAAGLLGSSPQAAMVGS-TNQLTQIPANLAAAFGTTTMPDPTDASWYMDTG 305

Query: 210 ATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPH 389
           AT+H+T+  G L S FN+S+ +  + VG+G  +P    G+  L     P  L NVL  P 
Sbjct: 306 ATTHLTAQPGTLHSLFNSSS-SPSVVVGNGSSVPTKAIGYSFLPSKIRPLHLHNVLVCPS 364

Query: 390 LIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLY-----XXXXXXXX 554
           +IKNLVSVR+FT DN VS+EFDPFGFS+KD  T T+L+RC+S G LY             
Sbjct: 365 IIKNLVSVRQFTKDNYVSVEFDPFGFSIKDFNTWTNLLRCNSDGPLYSITSPPLSSSSSS 424

Query: 555 XXXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
                       SSLWH RLGH G++ L+SL
Sbjct: 425 SPPQVMVATVPDSSLWHRRLGHLGNTTLQSL 455


>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
          Length = 1950

 Score =  139 bits (349), Expect = 9e-31
 Identities = 89/214 (41%), Positives = 114/214 (53%), Gaps = 8/214 (3%)
 Frame = +3

Query: 30   APRGSIPARPVQPGILGARPQQ--AYAEHIAPS----STYAPTDIKTVLHTMSHNAPDNN 191
            AP G          ILG  PQ   A+A   A S    ++ +  D   ++  + H     N
Sbjct: 934  APGGPGAQAGRNQSILGPSPQAHTAFAPLQASSGGSNTSTSTWDAAGLIAALQHMQLQGN 993

Query: 192  --WYMDSGATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFAL 365
              W +DSGA++HMTSS G L+     S  +  ITVG+G  IP+   GH  L  P   FAL
Sbjct: 994  SPWVVDSGASTHMTSSDGMLTQRLPPSISS--ITVGNGTTIPVTSRGHSVLPTPTTNFAL 1051

Query: 366  KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXX 545
             N+L AP +++NL+SVR+FT DN  S EFD  GFSVKDL TG  ++RC+S GDLY     
Sbjct: 1052 NNILVAPSIVRNLLSVRQFTRDNSCSFEFDAHGFSVKDLRTGRVILRCNSDGDLY--TMP 1109

Query: 546  XXXXXXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
                      F A SS+LWH RLGHP  + L  L
Sbjct: 1110 AGTPVAPSHAFLAASSTLWHQRLGHPAPAALERL 1143


>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
          Length = 1188

 Score =  136 bits (342), Expect = 6e-30
 Identities = 74/164 (45%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
 Frame = +3

Query: 162 TMSHN--APDNNWYMDSGATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVT 335
           TMS N  +P N WY+DSGA SHM ++ G L+S + +S+    I VG+G   P+   G  +
Sbjct: 354 TMSLNVPSPSNEWYIDSGAGSHMANNAGILTSSYPSSSHPSSIIVGNGASFPVTSVGSSS 413

Query: 336 LSPPNPPFALKNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDS 515
              P     L NVL AP +IKNL+SVRRFT DN  S+EFDPFG S+KDL T + + RC+S
Sbjct: 414 FVTPRRSLVLSNVLVAPGIIKNLISVRRFTIDNNCSIEFDPFGLSMKDLQTRSVIARCNS 473

Query: 516 TGDLYXXXXXXXXXXXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
           +GDLY                 + +S+LWH RLGH G   L  L
Sbjct: 474 SGDLYPFFVAPATSTTALAATTS-TSALWHRRLGHLGSDALSKL 516


>ref|XP_004231642.1| PREDICTED: uncharacterized protein LOC101267661 [Solanum
           lycopersicum]
          Length = 693

 Score =  135 bits (340), Expect = 1e-29
 Identities = 83/173 (47%), Positives = 100/173 (57%), Gaps = 10/173 (5%)
 Frame = +3

Query: 18  PVSPAP---RG-SIPARPVQPGIL---GARPQQAY--AEHIAPSSTYAPTDIKTVLHTMS 170
           P+ P P   RG + P  P Q  IL     R QQAY  +     S +  PTDI+  +HTMS
Sbjct: 203 PIPPCPHPTRGWTRPGTPNQQAILLCPRPRNQQAYMVSGQQQQSGSMTPTDIQAAMHTMS 262

Query: 171 HNAPDNNWYMDSGATSHMTSSQGNLSSYFNTS-NLNRQITVGSGQGIPINGYGHVTLSPP 347
                     D+GATSHMTSS G    YFN S + N  I VG+G  IPI  YGH  L   
Sbjct: 263 ----------DTGATSHMTSSSGKFLYYFNLSTHPNNNIVVGNGHKIPILHYGHTCLPSY 312

Query: 348 NPPFALKNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMR 506
           NP  +L NV HAP +IKNL+SVR+FT DN V++ FDPFGFS+KD  TG  + R
Sbjct: 313 NPTLSLYNVFHAPKIIKNLISVRKFTIDNSVTVAFDPFGFSIKDFQTGKQITR 365


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  135 bits (339), Expect = 1e-29
 Identities = 76/164 (46%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
 Frame = +3

Query: 162  TMSHNAPDNNWYMDSGATSHMTSSQGNLS-SYFNTSNLNRQITVGSGQGIPINGYGHVTL 338
            T  H    N+WYMD+GAT+HMTS  G LS S+    N    I VG+G  IP+   GH  +
Sbjct: 550  TTLHQPATNDWYMDTGATAHMTSDTGILSLSHPPNPNSPSHIVVGNGSTIPVTSIGHSKI 609

Query: 339  SPPNPPFALKNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDST 518
              PN  F L+++L +P +IKNL+SVRRF  DN  S+EFDPFGFSVKDL T T + R +S+
Sbjct: 610  CHPNCSFTLRDILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFSVKDLRTRTVIARFNSS 669

Query: 519  GDLYXXXXXXXXXXXXXXXFAAVSSS-LWHNRLGHPGDSILRSL 647
            G LY                A  S+  LWH RLGH G   L  L
Sbjct: 670  GPLYSLHHALPPPPAATALLANSSTDLLWHRRLGHLGHDALNRL 713


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score =  131 bits (330), Expect = 1e-28
 Identities = 84/207 (40%), Positives = 116/207 (56%), Gaps = 14/207 (6%)
 Frame = +3

Query: 69  GILGARPQQAYA---EHIAPSSTYAP-----------TDIKTVLHTMSHNAPDNNWYMDS 206
           G+LG  PQ   A    +++P +   P             +   L+ +S N+P + W +D+
Sbjct: 304 GLLGPYPQAHTAFASSYVSPPTPGWPPMPQVQPNWDQAGLVAALNQLSVNSP-SPWVLDT 362

Query: 207 GATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAP 386
           GATSHM+S+ G L +     N +  ITVG+G  IP+   G   L      FALKN+L AP
Sbjct: 363 GATSHMSSTDGILVT--RLPNSHTFITVGNGHTIPVICRGTSFLPIGTTRFALKNILVAP 420

Query: 387 HLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXX 566
            L++NL+ VR+FT DNK S EFD FGFSVKDL T   ++RC+S GDLY            
Sbjct: 421 SLVRNLLFVRQFTRDNKCSFEFDEFGFSVKDLPTRRVILRCNSRGDLY--TLPTTVPAIT 478

Query: 567 XXXFAAVSSSLWHNRLGHPGDSILRSL 647
              F A SS+LWH+RLGHP  + +++L
Sbjct: 479 AHSFLAKSSTLWHHRLGHPSPAAVQTL 505


>ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group]
            gi|255676213|dbj|BAH93053.1| Os05g0293200 [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  129 bits (323), Expect = 1e-27
 Identities = 80/206 (38%), Positives = 108/206 (52%), Gaps = 4/206 (1%)
 Frame = +3

Query: 42   SIPARPVQPGILGARPQQA-YAEHIAPSSTYAPTDIKTVLHTMSHNAP-DNNWYMDSGAT 215
            S+ A    P ++   P      +  A  S + P  + T  +T +   P  + WYMDSGA+
Sbjct: 494  SVSAYATLPSVVPPSPHMMPQPQQWAGPSQWDPQVLATNYNTATLTPPASDEWYMDSGAS 553

Query: 216  SHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLI 395
            SHMTS+ G L+    TS  +  + VG+G  +PI   G   ++ P+  F L NVL +P +I
Sbjct: 554  SHMTSNTGTLT-LAPTSPTSSCLVVGNGSLLPITATGSARINYPHYSFLLNNVLVSPAII 612

Query: 396  KNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXX 575
            KNL+S  RFT DN  S+E DPFG SVKD  T T ++RC+S+ DLY               
Sbjct: 613  KNLISAHRFTRDNWCSVELDPFGLSVKDYPTKTKIVRCNSSEDLYPFPVDAFSSAASACA 672

Query: 576  FAAVSSS--LWHNRLGHPGDSILRSL 647
            F A  S+  LWH RLGH G   L  L
Sbjct: 673  FIATESTIDLWHRRLGHIGHEALTRL 698


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score =  127 bits (320), Expect = 2e-27
 Identities = 82/210 (39%), Positives = 114/210 (54%), Gaps = 10/210 (4%)
 Frame = +3

Query: 48  PARPVQPGILGARPQQAYAEHIAPSSTYAPTD----------IKTVLHTMSHNAPDNNWY 197
           P R    GILG  PQ A+     P S+  P            +   L+ M+ + P N+W 
Sbjct: 295 PWRSPSAGILGPYPQ-AHTAFAGPYSSPPPAGSVQLAWDQAGLVAALNGMTLHNP-NSWV 352

Query: 198 MDSGATSHMTSSQGNLSSYFNTSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVL 377
           +++GATSHM+S+ G L +     N    ITVG+G  IP+   G   L      F L++VL
Sbjct: 353 LNTGATSHMSSTDGILVT--RLPNSQTYITVGNGHSIPVVCRGTSFLPIGTTRFDLRHVL 410

Query: 378 HAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXX 557
            AP L++NL+S+R+FT DNK S+EFD FGFS+KD  T   ++RC+S G+LY         
Sbjct: 411 VAPSLVRNLLSIRQFTRDNKCSIEFDEFGFSIKDPQTRRVILRCNSHGELYTLPAAAPSI 470

Query: 558 XXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
                   A SS+LWH RLGHPG + + +L
Sbjct: 471 AAHYN--LATSSTLWHRRLGHPGPTAVTTL 498


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  127 bits (319), Expect = 3e-27
 Identities = 85/214 (39%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
 Frame = +3

Query: 15   LPVSPAPRGS-IPARPVQPGILGARPQQAYAEHIAPSSTYAPTDIKTVLHTMSHNAP-DN 188
            +P +PA +G+   + P  P   GA  Q A A++                +TM+ N P  +
Sbjct: 416  VPATPAFQGTPYHSAPWNPIHGGAWNQDALAQNF---------------NTMTLNPPAPS 460

Query: 189  NWYMDSGATSHMTSSQGNLSSYFN-TSNLNRQITVGSGQGIPINGYGHVTLSPPNPPFAL 365
             WY DSGA SHM+S  G LS+    T +    I VG+G  +P+   G    S P+    L
Sbjct: 461  EWYADSGAGSHMSSDAGILSTTSPPTLSTPSSIIVGNGALLPVTTIGSRIFSFPHRNLVL 520

Query: 366  KNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXX 545
              VL +PH+IKNL+S+RRFTTDN   +EFDPFG SVKDL T   + RC+S+GDLY     
Sbjct: 521  NKVLVSPHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQTRNVIARCNSSGDLY----P 576

Query: 546  XXXXXXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
                        A  +SLWH RLGH G   L  L
Sbjct: 577  FFPPATSATALLAAPASLWHRRLGHLGREALSQL 610


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score =  127 bits (319), Expect = 3e-27
 Identities = 88/236 (37%), Positives = 113/236 (47%), Gaps = 27/236 (11%)
 Frame = +3

Query: 21   VSPAPRGSIPARPVQPGILGARPQQAYAEHIAPSSTYAPTDIKT---------------- 152
            V+ +P G +P  P  P +LG   Q   A+ +A S++Y P    T                
Sbjct: 486  VAASPNG-VPQHPAAPSVLGHAGQ---AQSLAASTSYQPVFAATPSTPGTPASWNGSANT 541

Query: 153  ---------VLHTMS-HNAPDNNWYMDSGATSHMTSSQGNLS-SYFNTSNLNRQITVGSG 299
                       +T+S    P ++WY+DSGA+SHMTS  G LS S     N    I VG G
Sbjct: 542  QWDQQGLINAFNTVSLSQPPSSDWYIDSGASSHMTSDAGTLSFSSQPNPNTPSHIIVGDG 601

Query: 300  QGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVRRFTTDNKVSLEFDPFGFSVKD 479
              +PI   G   LS P+  F L NVL +P +IKNL+ VRRF  DN VS+EFD  G  VKD
Sbjct: 602  SPLPITATGSTHLSFPHRSFVLNNVLVSPEIIKNLIVVRRFARDNDVSVEFDKDGLDVKD 661

Query: 480  LVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXXFAAVSSSLWHNRLGHPGDSILRSL 647
              +   ++ C+S GDLY                A  SS LWH+RLGH G   L  L
Sbjct: 662  FHSRNMIVWCNSFGDLYLVRPTELHYALA----ARESSVLWHHRLGHLGSEALTRL 713


>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
          Length = 2179

 Score =  127 bits (318), Expect = 4e-27
 Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
 Frame = +3

Query: 87  PQQAYAEHIAPSS--TYAPTDIKTVLHTMSHNAPDNN-WYMDSGATSHMTSSQGNLSSYF 257
           PQQ   +   P    ++ P+ + +  ++M+   P +  WY DSGA +HM ++ G LSS  
Sbjct: 398 PQQLQQQPWTPMQGMSWDPSALVSNFNSMTLTPPPSGEWYADSGAGAHMVNNAGILSSLH 457

Query: 258 NT-SNLNRQITVGSGQGIPINGYGHVTLSPPNPPFALKNVLHAPHLIKNLVSVRRFTTDN 434
              S+    I V +G  +P+   G  +      P  L NVL +P++IKNL+SVRRFT DN
Sbjct: 458 PPLSSSPSSIIVCNGASLPVTSIGSHSFPTTRRPLVLSNVLVSPNIIKNLISVRRFTIDN 517

Query: 435 KVSLEFDPFGFSVKDLVTGTHLMRCDSTGDLYXXXXXXXXXXXXXXXFAAVSSSLWHNRL 614
             S+EFDPFG SVKDL T + + RC+STGDLY                A  S+SLWH RL
Sbjct: 518 NCSIEFDPFGLSVKDLQTRSVIARCNSTGDLYPFFPAPSSTTAALTT-ATSSTSLWHRRL 576

Query: 615 GHPGDSILRSL 647
           GH G + L  L
Sbjct: 577 GHLGHAALFQL 587