BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00019249
         (1486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   144   2e-71
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   116   3e-69
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   137   2e-67
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   152   3e-67
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   139   1e-65
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   125   8e-60
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   125   2e-59
ref|XP_006366616.1| PREDICTED: uncharacterized protein LOC102598...   183   1e-43
ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605...   182   2e-43
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    76   9e-42
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    74   3e-41
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    84   9e-37
ref|XP_004250789.1| PREDICTED: uncharacterized protein LOC101266...   158   5e-36
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...    73   5e-35
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...    68   3e-34
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...    73   3e-34
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    74   9e-33
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    72   2e-32
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    67   1e-31
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    77   3e-31

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  144 bits (362), Expect(3) = 2e-71
 Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 6/260 (2%)
 Frame = +3

Query: 570  IAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQDFFTA 746
            +AWD +  PK  GGLN  N+ LWNK A++K  W +  KQDKLW+RWV+A+YIK Q+    
Sbjct: 848  VAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENV 907

Query: 747  SIPKQAS*MIRKLLKTRPILQQL---QVNPTGSKSIIRQIYLQLIGERARVP*KCMIF*N 917
            ++    S ++RK+ ++R +L +    +         I++ Y  L  +   V  K +I  N
Sbjct: 908  TVSSNTSWILRKIFESRELLTRTGGWEAVSNHMNFSIKKTYKLLQEDYENVVWKRLICNN 967

Query: 918  TTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI*H 1097
               PK+QF  WL +  RL T++R++ W  DV   C +C  + E   HLF  C +S +I  
Sbjct: 968  KATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFNCIYSKEIWG 1027

Query: 1098 MIMRWISQPIFISTN*EQHIK*GIANSKGRS--QRAWVFKLVYVETVYALWIERNQRLFE 1271
             ++ +++    +    +   K  +A  K RS   R  ++ +++ E+VYA+W+ RN ++F 
Sbjct: 1028 KVLLYLN----LQPQADAQAKKELAIKKARSTKDRNKLYVMMFTESVYAIWLLRNAKVFR 1083

Query: 1272 KRKREWLLISRDIVYICSVR 1331
              +       + I++  +VR
Sbjct: 1084 GIEINQNQAVKSIIFRIAVR 1103



 Score = 91.3 bits (225), Expect(3) = 2e-71
 Identities = 40/87 (45%), Positives = 58/87 (66%)
 Frame = +2

Query: 50  QFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSCVYF 229
           +F FHPKC+++ +TH+ F DDLL+FAR D  SIS + + F  FS ASGLQA++ KSC+YF
Sbjct: 674 EFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYF 733

Query: 230 GCVSIQDRATIIQHLGFTEGELHFKYM 310
           G V  ++   +   +    G L F+Y+
Sbjct: 734 GGVCHEEAEQLADRIQMPIGSLPFRYL 760



 Score = 84.3 bits (207), Expect(3) = 2e-71
 Identities = 37/94 (39%), Positives = 61/94 (64%)
 Frame = +1

Query: 286  GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
            G + F   G+PL ++K +  QC PLI+K+  R   W    LSYAGR+QLV+++L  +Q Y
Sbjct: 753  GSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNY 812

Query: 466  *AQLYVIPAKVLKAIDASCRSYIWSDTNTITKKA 567
              Q++ +P K++KA++ +CR ++W+ T   + KA
Sbjct: 813  WGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKA 846


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  116 bits (290), Expect(3) = 3e-69
 Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = +2

Query: 20  YLQSHLQG---NKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSAS 190
           YL   L+G   +K FK+HPK  KL +TH+CF DDLLLF+RGDL SI AL  CF EFS AS
Sbjct: 466 YLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQAS 525

Query: 191 GLQANMGKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           GLQAN+ KS +Y G V ++ R  IIQ LG+T  EL FKY+
Sbjct: 526 GLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYL 565



 Score =  108 bits (269), Expect(3) = 3e-69
 Identities = 49/86 (56%), Positives = 68/86 (79%)
 Frame = +1

Query: 310 GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
           G+PL+++K + +Q  PLIEK++ARI  WT +KLSYAGR QLV++VL G+QA  AQL++IP
Sbjct: 566 GVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIP 625

Query: 490 AKVLKAIDASCRSYIWSDTNTITKKA 567
           AK++K I+  CRSY+WS    +TKKA
Sbjct: 626 AKIIKLIEGLCRSYLWSGVGYVTKKA 651



 Score = 87.8 bits (216), Expect(3) = 3e-69
 Identities = 35/62 (56%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
 Frame = +3

Query: 549 YYNQESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIK 725
           Y  ++++IAWD VC PK  GGL   N+ +WN++A+ K CWDLA K+DKLWI+W+HA+YIK
Sbjct: 646 YVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIK 705

Query: 726 DQ 731
            Q
Sbjct: 706 GQ 707


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  137 bits (346), Expect(3) = 2e-67
 Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 7/260 (2%)
 Frame = +3

Query: 558  QESVIAWDIVCLPKIAGGLN-FNIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQD 734
            +++ +AW  +  PK  GG N  N+  WN+ A++K  W +  K+DKLW+RW+H++YIK QD
Sbjct: 841  KKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQD 900

Query: 735  FFTASIPKQAS*MIRKLLKTRPILQQL---QVNPTGSKSIIRQIYLQLIGERARVP*KCM 905
              T +I  Q + ++RK++K R  L  +        G K  +++ Y ++     RV  + +
Sbjct: 901  ILTVNISNQTTWILRKIVKARDHLSNIGDWDEICIGDKFSMKKAYKKISENGERVRWRRL 960

Query: 906  IF*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSM 1085
            I  N   PK++F  W+ +  RL T DR++ WG+  D    LC    E   HLF  C +S 
Sbjct: 961  ICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGETIQHLFFSCSYSA 1020

Query: 1086 QI*H---MIMRWISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERN 1256
             +      IMR+ +  +       Q I   +   + R ++  +  ++Y E VYA+W +RN
Sbjct: 1021 GVWSKICYIMRFPNSGVS-----HQEIISSVC-GQARKKKGKLIVMLYTEFVYAIWKQRN 1074

Query: 1257 QRLFEKRKREWLLISRDIVY 1316
            +R F    ++   + R I++
Sbjct: 1075 KRTFTGENKDENEVLRKILF 1094



 Score = 85.1 bits (209), Expect(3) = 2e-67
 Identities = 43/101 (42%), Positives = 62/101 (61%)
 Frame = +2

Query: 8   YLFNYLQSHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSA 187
           YL   L+  L+G+  F FHPKC++L ITH+ F DDLL+F R D  S+  +N  F++FS A
Sbjct: 658 YLSRCLEE-LKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHA 716

Query: 188 SGLQANMGKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           SGL A+  KS +YF  V  +    +  ++    GEL F+Y+
Sbjct: 717 SGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYL 757



 Score = 83.2 bits (204), Expect(3) = 2e-67
 Identities = 37/94 (39%), Positives = 60/94 (63%)
 Frame = +1

Query: 286  GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
            G + F   G+PLT++K +  QC PL+E +  R   W  + LSYAGR+QL++S+L  +Q Y
Sbjct: 750  GELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNY 809

Query: 466  *AQLYVIPAKVLKAIDASCRSYIWSDTNTITKKA 567
             A ++ +  KV++A++  CR ++W+     TKKA
Sbjct: 810  WAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKA 843


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  152 bits (383), Expect(3) = 3e-67
 Identities = 80/239 (33%), Positives = 132/239 (55%), Gaps = 1/239 (0%)
 Frame = +3

Query: 555  NQESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQ 731
            +++S IAW+ VC PKI GGLN  N+ +WNK +++K  W++  K D LWI+W+H +YI+ Q
Sbjct: 668  SRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQ 727

Query: 732  DFFTASIPKQAS*MIRKLLKTRPILQQLQVNPTGSKSIIRQIYLQLIGERARVP*KCMIF 911
              ++  + K  S ++  ++K RP+L Q Q +       +++IYL L  E  ++  + ++ 
Sbjct: 728  SIWSMVLKKSHSWIMSSMMKLRPLLLQYQ-SRMQDVFKMKKIYLALFEESEKMSWRTLMC 786

Query: 912  *NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI 1091
             N  RP+A F  W     RL + DRL  +G++VD  C  C +  E  +HLF  C     I
Sbjct: 787  NNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFCSSM-ESHEHLFFGCIELKTI 845

Query: 1092 *HMIMRWISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQRLF 1268
               ++ W+ Q I + +   + +       KG+  RA + K  + ET+Y +W  RN R+F
Sbjct: 846  WTAVLNWL-QIIHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYHIWAYRNHRVF 903



 Score = 80.9 bits (198), Expect(3) = 3e-67
 Identities = 38/98 (38%), Positives = 57/98 (58%)
 Frame = +2

Query: 17  NYLQSHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGL 196
           N + S L     F +H KC+K+ IT++CF DDLLLF+RGD+ S+  +   F  F  + GL
Sbjct: 488 NRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGL 547

Query: 197 QANMGKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
             N  K  +Y G V I  +  ++   GF EG++ F+Y+
Sbjct: 548 HVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYL 585



 Score = 72.4 bits (176), Expect(3) = 3e-67
 Identities = 36/94 (38%), Positives = 59/94 (62%)
 Frame = +1

Query: 286 GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
           G++ F   GIPL+++K ++     LI+K++ RI  W+   LSYAGRVQL+QSV+     +
Sbjct: 578 GKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINF 637

Query: 466 *AQLYVIPAKVLKAIDASCRSYIWSDTNTITKKA 567
             Q   +P  V+  I+A CRS++W   + I++K+
Sbjct: 638 WMQCLPLPKFVIMRINAICRSFLWIGNSNISRKS 671


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  139 bits (351), Expect(3) = 1e-65
 Identities = 77/243 (31%), Positives = 137/243 (56%), Gaps = 5/243 (2%)
 Frame = +3

Query: 555  NQESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQ 731
            +++S +AW  +C P+  GGLN  +I +WNK  L+K  W+L+ K+D LW++W+ A+Y+K  
Sbjct: 226  SRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRS 285

Query: 732  DFFTASIPKQAS*MIRKLLKTRPILQQL----QVNPTGSKSIIRQIYLQLIGERARVP*K 899
            +     +    S +++ +LK R  L+++    ++   GS + + ++Y +L     R   K
Sbjct: 286  ELMHIEMKNTDSWIMKAILKQREDLEKIDNMEELMIRGSIN-MGKLYRKLQDCGQRKEWK 344

Query: 900  CMIF*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGF 1079
             +++ NT RP+A F  WL   GRL T DRL  +GM  D++C  C ++ E  +HLF  C  
Sbjct: 345  NLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFC-SEEESMNHLFFVCDN 403

Query: 1080 SMQI*HMIMRWISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQ 1259
            S ++   +++W+ Q     ++    +     ++KG+  RA V K+   ET+Y +W  RN 
Sbjct: 404  SKRVWMEVLQWV-QIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAETIYEIWNIRNN 462

Query: 1260 RLF 1268
            ++F
Sbjct: 463  KIF 465



 Score = 83.6 bits (205), Expect(3) = 1e-65
 Identities = 39/92 (42%), Positives = 57/92 (61%)
 Frame = +2

Query: 35  LQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGK 214
           +Q +  F +HPKCDKL IT++CF DDLLLF+RGD  S+  +   ++ FS A+GL  N  K
Sbjct: 52  MQKDGDFNYHPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQK 111

Query: 215 SCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
             +    +    +  I++  GF EG+L FKY+
Sbjct: 112 CSLLCAGIDAVTKREILEVSGFQEGQLPFKYL 143



 Score = 76.6 bits (187), Expect(3) = 1e-65
 Identities = 35/85 (41%), Positives = 55/85 (64%)
 Frame = +1

Query: 286 GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
           G++ F   G+P+T++K S +   PLI+K++ +I  WT R LSYAGR+QLV SV+  +  Y
Sbjct: 136 GQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNY 195

Query: 466 *AQLYVIPAKVLKAIDASCRSYIWS 540
               +  P  VL+ I+A CR ++W+
Sbjct: 196 WLNCFPFPKSVLQKIEAICRIFLWT 220


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  125 bits (315), Expect(3) = 8e-60
 Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
 Frame = +3

Query: 558  QESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQD 734
            ++S++AW  VC P   GGLN  N+ LWN TA++K  W++  K+D LW++W+HA+++K  +
Sbjct: 330  RKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGDN 389

Query: 735  FFTASIPKQAS*MIRKLLKTRPILQQLQV----NPTGSKSIIRQIYLQLIGERARVP*KC 902
              +A+I   ++ +++ ++K RP +  LQ+         K  ++Q+Y++L+ +  ++    
Sbjct: 390  VMSATIKSNSTWILKSVMKQRPQVNNLQLVWIEMLRKRKFSMKQVYMELVEDHNKIDWFR 449

Query: 903  MIF*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKC 1073
            ++  N  RP+A  T WL  Q RL T  RL +  M     C LC+ Q+E  DHL   C
Sbjct: 450  LLRYNRARPRANVTLWLACQNRLATKTRLKNMNMIQCSLCSLCKEQDEDLDHLMFSC 506



 Score = 77.8 bits (190), Expect(3) = 8e-60
 Identities = 33/86 (38%), Positives = 60/86 (69%)
 Frame = +1

Query: 310 GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
           G+PL+ +K ++   +PL+EK++ +I  W+ + LS AGR+QLV+S++  I  Y   ++ +P
Sbjct: 247 GVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMP 306

Query: 490 AKVLKAIDASCRSYIWSDTNTITKKA 567
            KV++ ID+ CRS+IWS +  + +K+
Sbjct: 307 KKVIQKIDSICRSFIWSGSAEVKRKS 332



 Score = 77.0 bits (188), Expect(3) = 8e-60
 Identities = 38/99 (38%), Positives = 54/99 (54%)
 Frame = +2

Query: 14  FNYLQSHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASG 193
           FN +   +Q N  F  H +C++LGITH+ F DD+ L  RGD  SI  +   F  FS ++G
Sbjct: 148 FNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTG 207

Query: 194 LQANMGKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           LQ N  K  V+ G ++      I +  GF EG L  +Y+
Sbjct: 208 LQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYL 246


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  125 bits (315), Expect(3) = 2e-59
 Identities = 79/245 (32%), Positives = 125/245 (51%), Gaps = 8/245 (3%)
 Frame = +3

Query: 558  QESVIAWDIVCLPKIAGGLN-FNIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQD 734
            ++S IAW+ VC PK  GGLN FN+ +WN   ++   W+L +K D LW++W+HA YIK+  
Sbjct: 669  RKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSS 728

Query: 735  FFTASIPKQAS*MIRKLLKTRPILQQLQ------VNPTGSKSIIRQIYLQLIGERARVP* 896
                 +    S +++ +L  R  +  LQ      +N    K  +++ Y +++ E  RV  
Sbjct: 729  VMNTMVTNNFSWVLKNVLSQREYIHTLQPVWDELLNSERFK--MKKAYDKMM-EADRVHW 785

Query: 897  KCMIF*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCG 1076
              ++  N  RP+A  T WL   GRL T DRL  +GM  D+   LC+   E ++H+   C 
Sbjct: 786  SGLMRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDKIWSLCKEVEETQNHILFSCK 845

Query: 1077 FSMQI*HMIMRWIS-QPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIER 1253
             +  I   ++  I    +      E      + N KG   RA++ KL   ET+Y +WI R
Sbjct: 846  VATDIWSNVLNRIGIDHVPQEWPLELDWLLNLTNRKG--WRAYLLKLSVTETIYGIWINR 903

Query: 1254 NQRLF 1268
            N ++F
Sbjct: 904  NSKIF 908



 Score = 77.8 bits (190), Expect(3) = 2e-59
 Identities = 40/98 (40%), Positives = 56/98 (57%)
 Frame = +2

Query: 17  NYLQSHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGL 196
           N L   LQ +  F  H KC+KLGITH+ F DD+LLF RGD+ S+  +     +FS+ +GL
Sbjct: 488 NRLLVKLQLDLNFNHHAKCEKLGITHLTFADDVLLFCRGDVMSVEMMLHVINKFSATTGL 547

Query: 197 QANMGKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
             N  K  +YFG V    +  I Q   + EG+L  +Y+
Sbjct: 548 VVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYL 585



 Score = 75.9 bits (185), Expect(3) = 2e-59
 Identities = 35/86 (40%), Positives = 55/86 (63%)
 Frame = +1

Query: 310 GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
           G+PLT++K ++   +PLI+K+  RI  WT + L+  GRVQ+V   +  I  +  Q   IP
Sbjct: 586 GVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIP 645

Query: 490 AKVLKAIDASCRSYIWSDTNTITKKA 567
             V+K ID+ CRS++WS +  IT+K+
Sbjct: 646 MSVIKKIDSMCRSFVWSRSTEITRKS 671


>ref|XP_006366616.1| PREDICTED: uncharacterized protein LOC102598485 [Solanum tuberosum]
          Length = 189

 Score =  183 bits (465), Expect = 1e-43
 Identities = 88/188 (46%), Positives = 123/188 (65%)
 Frame = +3

Query: 771  MIRKLLKTRPILQQLQVNPTGSKSIIRQIYLQLIGERARVP*KCMIF*NTTRPKAQFTFW 950
            M++K+L+ R +  Q Q     +KS+IRQ+Y  L   + RVP KC++F N  RPKA FT W
Sbjct: 1    MVKKILEARQVYSQFQPIVLQNKSMIRQLYFHLFRPQQRVPWKCLMFQNFARPKAVFTMW 60

Query: 951  LQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI*HMIMRWISQPIF 1130
            LQ+Q RL T+DRL  WG+D++  CVLC+   EFRDH++T C +S Q+   +++WI     
Sbjct: 61   LQLQNRLNTTDRLKKWGLDIELKCVLCQLHFEFRDHMYTSCPYSQQVWSKLLQWIQFVQA 120

Query: 1131 ISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQRLFEKRKREWLLISRDI 1310
               N  Q++   I  +KG++  A +FKLVY E VYA+WIERN R+FEK  R W  ++R+I
Sbjct: 121  PYNNWSQYVLGIIDAAKGKTPTAQIFKLVYTEYVYAIWIERNHRIFEKDSRTWESLAREI 180

Query: 1311 VYICSVRA 1334
             YIC VRA
Sbjct: 181  AYICCVRA 188


>ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605115 [Solanum tuberosum]
          Length = 201

 Score =  182 bits (463), Expect = 2e-43
 Identities = 89/201 (44%), Positives = 126/201 (62%)
 Frame = +3

Query: 771  MIRKLLKTRPILQQLQVNPTGSKSIIRQIYLQLIGERARVP*KCMIF*NTTRPKAQFTFW 950
            M++K+L+ R +  Q Q     +KS+IRQ+Y  L   + RVP KC++F N  RPKA FT W
Sbjct: 1    MVKKILEARQVYSQFQPIVLQNKSMIRQLYFHLFRPQQRVPWKCLMFQNFARPKAVFTMW 60

Query: 951  LQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI*HMIMRWISQPIF 1130
            LQ+Q RL T+DRL  WG+D++  CVLC    E RDH++T+C +S Q+   +++WI     
Sbjct: 61   LQLQNRLNTTDRLKKWGLDIELKCVLCRLHLESRDHMYTRCPYSQQVWSKLLQWIQFVQA 120

Query: 1131 ISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQRLFEKRKREWLLISRDI 1310
               N  Q++   I  +KG++  A +FKLVY E VYA+WIERN R+FEK  R W  ++R+I
Sbjct: 121  PYNNWSQYVLGIIDAAKGKTPTAQIFKLVYTEYVYAIWIERNHRIFEKDSRTWESLAREI 180

Query: 1311 VYICSVRAPLGIRSYVYQLKF 1373
             YIC VRA       ++Q  F
Sbjct: 181  AYICCVRASQKTMQAIHQFAF 201


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 76.3 bits (186), Expect(3) = 9e-42
 Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 17/248 (6%)
 Frame = +3

Query: 570  IAWDIVCLPKIAGGLNFNIYL-WNKTALVKTCWDLARKQDKLWIRWVHAFYIKD------ 728
            +AW  VC PK  GGL     +  NK    K  W L   +  LW+ W+    I+       
Sbjct: 1115 VAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIRTVAEALS 1174

Query: 729  -------QDFFTASIPKQAS*MIRKLLKT---RPILQQLQVNPTGSKSIIRQIYLQLIGE 878
                   +D     I ++   ++ + + T   R + + +      +K    +I+ Q+  +
Sbjct: 1175 SHRRRSHRDDILNDIEEELEKLLCRGICTEQDRSLCRSIG-GQFKAKFFSPEIWHQIREQ 1233

Query: 879  RARVP*KCMIF*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDH 1058
                     I+ +   PK  F  WL    RL T D++A W   +   CVLC    E RDH
Sbjct: 1234 GLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDH 1293

Query: 1059 LFTKCGFSMQI*HMIMRWISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYA 1238
            LF  C FS  I   + R +    + +TN    +   ++       + ++ + V+  T++ 
Sbjct: 1294 LFFSCNFSSHIWDRLTRRLLLCRY-TTNFPALLL-LLSGQDFSGTKRFLLRYVFQATIHT 1351

Query: 1239 LWIERNQR 1262
            LW ERN+R
Sbjct: 1352 LWRERNKR 1359



 Score = 75.9 bits (185), Expect(3) = 9e-42
 Identities = 30/88 (34%), Positives = 56/88 (63%)
 Frame = +2

Query: 47   KQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSCVY 226
            K+F +HP+C  +G+TH+CF DD+++F+ G   S+  + + FK+F++ SGL  ++ KS ++
Sbjct: 940  KRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLF 999

Query: 227  FGCVSIQDRATIIQHLGFTEGELHFKYM 310
               +S +  A+I+    F  G L  +Y+
Sbjct: 1000 MASISSETCASILARFPFDSGSLPVRYL 1027



 Score = 67.8 bits (164), Expect(3) = 9e-42
 Identities = 31/86 (36%), Positives = 53/86 (61%)
 Frame = +1

Query: 310  GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
            G+PL T++ +L  C+PL+EK+ +RI  W  R LSYAGR+QL+ SV+  +  +    + +P
Sbjct: 1028 GLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLP 1087

Query: 490  AKVLKAIDASCRSYIWSDTNTITKKA 567
               ++ I+    +++WS T+    KA
Sbjct: 1088 RACIREIEQISAAFLWSGTDLNPHKA 1113


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score = 73.6 bits (179), Expect(3) = 3e-41
 Identities = 70/275 (25%), Positives = 106/275 (38%), Gaps = 27/275 (9%)
 Frame = +3

Query: 570  IAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQDFFTA 746
            +AW  +CLPK  GGL   +++ WNK  ++   W+L       W  WV  + +K   F+ A
Sbjct: 682  VAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNA 741

Query: 747  SIPKQAS*MIRKLLKTRPILQQLQVNPTGS--------------KSIIRQIYLQLIGERA 884
             +P   S   RKLLK R +     VN  G                 +  +    +IGE +
Sbjct: 742  PLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHPLGPLTLRWSSNIIGE-S 800

Query: 885  RVP*KCMI----------F*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCE 1034
             +    M+            NT RP      W ++                      + E
Sbjct: 801  GLSKSAMLTPNGFYSTSSAWNTLRPSRFIVPWYRL-------------------VWFVAE 841

Query: 1035 TQNEFRDHLFTKCGFSMQI-*HMIMRW-ISQPIFISTN*EQHIK*GIANSKGRSQRAWVF 1208
            T N    HLF  C +S  I  H++ +  +S+P+   ++    I     N KG S    + 
Sbjct: 842  THN----HLFFDCAYSFGIWTHVLSKCDVSKPLLPWSD---FIFWVATNWKGNSLPVVIL 894

Query: 1209 KLVYVETVYALWIERNQRLFEKRKREWLLISRDIV 1313
            KL     VYA+W ERN R F        ++ + IV
Sbjct: 895  KLALQAVVYAIWRERNNRRFRNESLPPAVVFKGIV 929



 Score = 73.2 bits (178), Expect(3) = 3e-41
 Identities = 35/77 (45%), Positives = 50/77 (64%)
 Frame = +1

Query: 310 GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
           GIPL T K  +  C PL++++  RI  W  + LS+AGR+QL+QSVL  IQ Y A   ++P
Sbjct: 595 GIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILP 654

Query: 490 AKVLKAIDASCRSYIWS 540
            KVLK I+   R ++W+
Sbjct: 655 KKVLKDIEKRLRCFLWA 671



 Score = 71.2 bits (173), Expect(3) = 3e-41
 Identities = 31/96 (32%), Positives = 55/96 (57%)
 Frame = +2

Query: 23  LQSHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQA 202
           +Q  +  +  F++H +CD+L ++H+CF DDLL+F  GD  S+  L+  F  F S S L+A
Sbjct: 499 IQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKA 558

Query: 203 NMGKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           N+ +S ++   V      +++Q   F+ G    +Y+
Sbjct: 559 NVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYL 594


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 83.6 bits (205), Expect(3) = 9e-37
 Identities = 36/89 (40%), Positives = 55/89 (61%)
 Frame = +2

Query: 44   NKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSCV 223
            ++   +HPKC+K+G+TH+CF DDL++F  G   SI  + + FKEF+  SGLQ ++ KS +
Sbjct: 981  HRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTI 1040

Query: 224  YFGCVSIQDRATIIQHLGFTEGELHFKYM 310
            Y   VS  DR   +    F  G+L  +Y+
Sbjct: 1041 YLAGVSASDRVQTLSSFPFANGQLPVRYL 1069



 Score = 67.0 bits (162), Expect(3) = 9e-37
 Identities = 33/86 (38%), Positives = 50/86 (58%)
 Frame = +1

Query: 310  GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
            G+PL T++ +     PLIE +  +I  WT R LSYAGR+ L+ SV+V I  +    Y +P
Sbjct: 1070 GLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLP 1129

Query: 490  AKVLKAIDASCRSYIWSDTNTITKKA 567
            A  ++ I+  C +++WS      KKA
Sbjct: 1130 AGCIREIEKLCSAFLWSGPVLNPKKA 1155



 Score = 52.4 bits (124), Expect(3) = 9e-37
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +3

Query: 558  QESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQD 734
            +++ IAW  +C PK  GGL   ++   NK + +K  W L   Q  LW+ W+  F I+   
Sbjct: 1153 KKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGT 1212

Query: 735  FFTASIPKQ-AS*MIRKLLKTRPILQQL 815
            F++A+      S M +KLLK R + + +
Sbjct: 1213 FWSANERSSLGSWMWKKLLKYRELAKSM 1240



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
 Frame = +3

Query: 927  PKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI*HMIM 1106
            PK  F  WL VQ RL T DR+  W      TC LC    E RDHLF  C ++  +   + 
Sbjct: 1365 PKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALT 1424

Query: 1107 RWISQPIFISTN*EQ---HIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQR 1262
            + +     +STN  +    +   +  S       ++F+ V+  ++Y +W ERN R
Sbjct: 1425 QRL-----LSTNYSRDWNRLFTLLCTSNLPRDHLFLFRYVFQASIYHIWRERNAR 1474


>ref|XP_004250789.1| PREDICTED: uncharacterized protein LOC101266593 [Solanum
            lycopersicum]
          Length = 209

 Score =  158 bits (400), Expect = 5e-36
 Identities = 81/203 (39%), Positives = 127/203 (62%)
 Frame = +3

Query: 750  IPKQAS*MIRKLLKTRPILQQLQVNPTGSKSIIRQIYLQLIGERARVP*KCMIF*NTTRP 929
            IP+QA  MI+K+++ R    Q   +    K I+R+ Y +L+ +RAR+P K  +F N   P
Sbjct: 3    IPQQACWMIKKIMEARKFWAQDSGSNISGKRILREKYSELLEDRARIPWKATMFSNAAAP 62

Query: 930  KAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI*HMIMR 1109
            K  F  W+Q+  RLLT+ RL  WGM+++ TCVLC  +++ +DH F  C F+M +   ++ 
Sbjct: 63   KIAFIIWVQLDARLLTN-RLWKWGMEINPTCVLCNQEDKTQDHFFAHCEFTMLVWAKMLL 121

Query: 1110 WISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQRLFEKRKREW 1289
            WI +    +TN  +H++  I + KG+S +  VFK+VY +TVYALW ERNQ +FE++  E 
Sbjct: 122  WIQRQNPQTTNWNEHLQWVINSLKGKSMQVQVFKMVYADTVYALWNERNQTVFERKTLEP 181

Query: 1290 LLISRDIVYICSVRAPLGIRSYV 1358
              I R + YIC+VR+   +R+ +
Sbjct: 182  NHIVRRVDYICNVRSTTTVRTLI 204


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score = 72.8 bits (177), Expect(3) = 5e-35
 Identities = 33/94 (35%), Positives = 53/94 (56%)
 Frame = +2

Query: 29  SHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANM 208
           S+L+ +  FKFHP C  + + H+ F DD++  +RGD+PS+S + +  + F   SGL  N 
Sbjct: 2   SNLKDDANFKFHPNCAGIQLFHLAFADDIMFLSRGDIPSVSTMFAKLQHFCRVSGLSINS 61

Query: 209 GKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
            KS +Y   +   + + I Q  GF  G   F+Y+
Sbjct: 62  DKSAIYSAGIRPHELSHIQQLTGFNLGGFPFRYL 95



 Score = 66.6 bits (161), Expect(3) = 5e-35
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +3

Query: 561 ESVIAWDIVCLPKIAGGLN-FNIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQD 734
           +S+IAW +VC PK  GGL  FN+  WN T L +  WD   K+D LW+RWVH +Y +  D
Sbjct: 180 KSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVRWVHHYYFRASD 238



 Score = 57.8 bits (138), Expect(3) = 5e-35
 Identities = 26/84 (30%), Positives = 51/84 (60%)
 Frame = +1

Query: 286 GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
           G   F   G+PL + + ++    PL+ K+   I  W+ + LSYAG+++L+++V+ GI  +
Sbjct: 88  GGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNF 147

Query: 466 *AQLYVIPAKVLKAIDASCRSYIW 537
             +++ +   VL  I+ASC +++W
Sbjct: 148 WMKIFPLSQSVLDRINASCCNFLW 171


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score = 68.2 bits (165), Expect(3) = 3e-34
 Identities = 31/94 (32%), Positives = 53/94 (56%)
 Frame = +2

Query: 29  SHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANM 208
           S  + +  FKFHP C  + ++H+ F DD++L +RGD+P +S + +  + F   SGL  + 
Sbjct: 35  SSFKDDANFKFHPNCAGIQLSHLAFADDIMLLSRGDIPYMSTMFAKLQHFCRVSGLSISS 94

Query: 209 GKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
            KS +Y   +   + + I Q  GF+ G   F+Y+
Sbjct: 95  DKSAIYSAGIRPYELSHIQQLTGFSLGGFPFRYL 128



 Score = 65.5 bits (158), Expect(3) = 3e-34
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +3

Query: 567 VIAWDIVCLPKIAGGLN-FNIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQDFFT 743
           ++AW +VC PK  GGL  FN+  WN   L    WD   K+D L +RWVH +Y +  D + 
Sbjct: 215 LVAWPVVCSPKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVRWVHHYYFRRSDEWN 274

Query: 744 ASIPKQAS*MIRKLLKTRPILQQLQVNPTGSKSIIR 851
            +I    S +I+K+++ R  +   +++   +K  I+
Sbjct: 275 YNISSSNSVLIKKIIQIRDFIISKELSMEETKKRIQ 310



 Score = 60.8 bits (146), Expect(3) = 3e-34
 Identities = 27/85 (31%), Positives = 51/85 (60%)
 Frame = +1

Query: 286 GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
           G   F   G PL + + ++    PL+ K++  I  W  + LSY G+++L+++V+ GI  +
Sbjct: 121 GGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNF 180

Query: 466 *AQLYVIPAKVLKAIDASCRSYIWS 540
             +++ +P  VL  I+ASC +++WS
Sbjct: 181 WMRIFPLPQSVLDRINASCCNFLWS 205


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score = 72.8 bits (177), Expect(3) = 3e-34
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = +2

Query: 29  SHLQGNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANM 208
           S L+ +  FKFHP C  + ++H+ FVDD++L +RGD+PS+S + +  + F    GL  + 
Sbjct: 2   SSLKDDANFKFHPNCAGIQLSHLAFVDDIMLLSRGDIPSMSTMFAKLQHFCRVLGLSISS 61

Query: 209 GKSCVYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
            KS +Y   +   + + I Q  GF+ G   F+Y+
Sbjct: 62  DKSSIYSSSIRTHELSHIQQLTGFSLGGFPFRYL 95



 Score = 64.3 bits (155), Expect(3) = 3e-34
 Identities = 30/93 (32%), Positives = 55/93 (59%)
 Frame = +1

Query: 286 GRIAF*IHGIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY 465
           G   F   G+PL + + ++    PL+ K+   I  W+ + LSYAG+++L+++V+ GI  +
Sbjct: 88  GGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNF 147

Query: 466 *AQLYVIPAKVLKAIDASCRSYIWSDTNTITKK 564
              ++ +P  VL  I+ASCR+++W   +   KK
Sbjct: 148 WIGIFPLPQSVLDRINASCRNFLWGKADIGKKK 180



 Score = 57.4 bits (137), Expect(3) = 3e-34
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = +3

Query: 558 QESVIAWDIVCLPKIAGGLN-FNIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQD 734
           ++ ++AW +VC PK  GGL  FN+  WN   L    WD   K+D L   WVH +Y +  D
Sbjct: 179 KKPLVAWSVVCSPKREGGLGLFNLKDWNLALLSCILWDFHCKKDSL---WVHHYYFRRSD 235

Query: 735 FFTASIPKQAS*MIRKLLKTRPILQQLQVNPTGSKSIIR 851
            +  +     S +I+K+++ R  +   +++   +K  I+
Sbjct: 236 VWNYNTSSSYSVLIKKIIQIRDFIISKELSTEEAKKRIQ 274


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 73.9 bits (180), Expect(3) = 9e-33
 Identities = 32/90 (35%), Positives = 54/90 (60%)
 Frame = +2

Query: 41  GNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSC 220
           G ++F +HP+C ++G+TH+ F DDL++ + G + SI  +   F+ F+  SGL+ +M KS 
Sbjct: 65  GQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEKST 124

Query: 221 VYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           VYF  +S      ++ H  F  G L  +Y+
Sbjct: 125 VYFAGLSHTSPQEVMAHFPFAVGTLPVRYL 154



 Score = 65.9 bits (159), Expect(3) = 9e-33
 Identities = 33/86 (38%), Positives = 51/86 (59%)
 Frame = +1

Query: 310 GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
           G+PL T++ S    +PLIE +  +I  W+ R LSYAGR+ L+ SVL  I  +    + +P
Sbjct: 155 GLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLP 214

Query: 490 AKVLKAIDASCRSYIWSDTNTITKKA 567
            + ++ ID  C +Y+WS  +  T KA
Sbjct: 215 RECIREIDKMCSAYLWSGGDLNTSKA 240



 Score = 49.7 bits (117), Expect(3) = 9e-33
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +3

Query: 570 IAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQDFFTA 746
           IAW  VC PK  GGL   ++   N  + +K  W +    D LW++W+HA  +K   F+  
Sbjct: 242 IAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAV 301

Query: 747 -SIPKQAS*MIRKLLKTRPILQQL 815
                  S M +K+LK R    QL
Sbjct: 302 RENTSLGSWMWKKVLKFRDAAIQL 325


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 70.9 bits (172), Expect(3) = 2e-32
 Identities = 33/86 (38%), Positives = 53/86 (61%)
 Frame = +1

Query: 310  GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
            G+PL T++ S   C+PL+E++  RI  WT R LSYAGR+ L+ SVL  I  +    + +P
Sbjct: 773  GLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLP 832

Query: 490  AKVLKAIDASCRSYIWSDTNTITKKA 567
             K ++ ++  C +++WS T   + KA
Sbjct: 833  RKCIRELEKMCSAFLWSGTEMNSNKA 858



 Score = 69.7 bits (169), Expect(3) = 2e-32
 Identities = 31/88 (35%), Positives = 51/88 (57%)
 Frame = +2

Query: 47  KQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSCVY 226
           + F +HPKC  +G+TH+ F DDL++ + G + SI  +   F EF+  SGL+ ++ KS VY
Sbjct: 685 RHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVY 744

Query: 227 FGCVSIQDRATIIQHLGFTEGELHFKYM 310
              +S   R  +     F+ G+L  +Y+
Sbjct: 745 LAGLSATARNEVADRFPFSSGQLPVRYL 772



 Score = 47.8 bits (112), Expect(3) = 2e-32
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
 Frame = +3

Query: 555  NQESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQ 731
            + ++ I+W +VC PK  GGL   ++   N    +K  W +    + LW++WV    +++ 
Sbjct: 855  SNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNA 914

Query: 732  DFF-TASIPKQAS*MIRKLLKTRPILQQLQVNPTGS 836
             F+       Q S + +KLLK R + + L     G+
Sbjct: 915  SFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGN 950



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 44/127 (34%), Positives = 64/127 (50%)
 Frame = +3

Query: 882  ARVP*KCMIF*NTTRPKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHL 1061
            ARVP   +I+ +   PK  F  WL   GRL T DR+ +W   +   C+ C+   E RDHL
Sbjct: 1052 ARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHL 1111

Query: 1062 FTKCGFSMQI*HMIMRWISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYAL 1241
            F  C F+  I   + R I +  +  T+  Q I   I NS+      ++ + V+  T+Y +
Sbjct: 1112 FFTCSFTSVIWVDLARGIFKTQY--TSHWQSIIEAITNSQHHRVEWFLRRYVFQATIYIV 1169

Query: 1242 WIERNQR 1262
            W ERN R
Sbjct: 1170 WRERNGR 1176


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 66.6 bits (161), Expect(3) = 1e-31
 Identities = 30/90 (33%), Positives = 48/90 (53%)
 Frame = +2

Query: 41  GNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSC 220
           G ++F +HPKC  LG+TH+ F DD+++   G L S+  +   F  F+  SGL+ +M K+ 
Sbjct: 201 GLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTT 260

Query: 221 VYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           +YF  +S            F  G L  +Y+
Sbjct: 261 IYFAGISKSVCKEFEDQFHFAVGRLPVRYL 290



 Score = 62.8 bits (151), Expect(3) = 1e-31
 Identities = 32/85 (37%), Positives = 49/85 (57%)
 Frame = +1

Query: 313 IPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIPA 492
           +PL T++ +     PL+E++  RI  WT R LSYAGR+ LV SVL  I  +    + +P 
Sbjct: 292 LPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPR 351

Query: 493 KVLKAIDASCRSYIWSDTNTITKKA 567
           + ++ ID  C +++WS     T KA
Sbjct: 352 ECVREIDKLCSAFLWSGPELSTNKA 376



 Score = 56.2 bits (134), Expect(3) = 1e-31
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = +3

Query: 570 IAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKDQDFFTA 746
           IAW+ VC PK  GGL   +I   N    +K  W +  + D LW++W+  + +K   F++ 
Sbjct: 378 IAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSF 437

Query: 747 SIPKQAS*MIRKLLKTR 797
               Q S M +KLLK R
Sbjct: 438 RSASQGSWMWKKLLKYR 454


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 77.0 bits (188), Expect(3) = 3e-31
 Identities = 36/90 (40%), Positives = 52/90 (57%)
 Frame = +2

Query: 41  GNKQFKFHPKCDKLGITHMCFVDDLLLFARGDLPSISALNSCFKEFSSASGLQANMGKSC 220
           G K+F FHPKC  LG+TH+CF DDL++   G + S+  +      F+  SGLQ NM K+ 
Sbjct: 88  GGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTT 147

Query: 221 VYFGCVSIQDRATIIQHLGFTEGELHFKYM 310
           +Y   VS  +R  +I    F  G+L  +Y+
Sbjct: 148 LYTAGVSDHNRYMMISRYPFGLGQLPVRYL 177



 Score = 60.5 bits (145), Expect(3) = 3e-31
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = +1

Query: 310 GIPLTTRKSSLVQCVPLIEKLIARIICWTVRKLSYAGRVQLVQSVLVGIQAY*AQLYVIP 489
           G+PL T++ +     PL E++  RI  WT R LS+AGR+ L+ SVL     +    + +P
Sbjct: 178 GLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLP 237

Query: 490 AKVLKAIDASCRSYIWSDTNTITKKA 567
           +  LK I++ C +++WS      +KA
Sbjct: 238 SACLKEINSICSAFLWSGPELHRRKA 263



 Score = 46.6 bits (109), Expect(3) = 3e-31
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +3

Query: 552 YNQESVIAWDIVCLPKIAGGLNF-NIYLWNKTALVKTCWDLARKQDKLWIRWVHAFYIKD 728
           + +++ ++WD +C PK  GGL   ++   N  +++K  W +    D LW++W     +K 
Sbjct: 259 HRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQ 318

Query: 729 QDFFTASIPKQ-AS*MIRKLLKTR 797
           + F++ +      S M +K+LK R
Sbjct: 319 ESFWSLTPNSSLGSWMWKKMLKYR 342



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 39/112 (34%), Positives = 58/112 (51%)
 Frame = +3

Query: 927  PKAQFTFWLQVQGRLLTSDRLAHWGMDVDQTCVLCETQNEFRDHLFTKCGFSMQI*HMIM 1106
            PK QF  WL ++ RL T  R+  W    D  C  C T  E RDHLF  C ++  I   I 
Sbjct: 473  PKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIA 532

Query: 1107 RWISQPIFISTN*EQHIK*GIANSKGRSQRAWVFKLVYVETVYALWIERNQR 1262
            + + Q  F ST+  Q I   I+ ++    R+++ + ++  TV+ +W ERN R
Sbjct: 533  KNVLQHRF-STD-WQTIVNYISETQTDRIRSFLSRYIFQLTVHTVWKERNDR 582