BLASTX nr result
ID: Atropa21_contig00019136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00019136
(830 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloropl... 242 1e-61
ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloropl... 239 7e-61
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl... 194 4e-47
emb|CBI33662.3| unnamed protein product [Vitis vinifera] 194 4e-47
gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus pe... 192 1e-46
ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloropl... 190 6e-46
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl... 189 1e-45
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis] 186 1e-44
ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloropl... 185 2e-44
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ... 181 2e-43
gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus... 181 3e-43
gb|AFK46934.1| unknown [Lotus japonicus] 181 4e-43
gb|AFK41643.1| unknown [Lotus japonicus] 181 4e-43
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin... 181 4e-43
gb|EOY04215.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao] 180 5e-43
sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, ch... 178 2e-42
ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Popu... 177 5e-42
ref|XP_006437701.1| hypothetical protein CICLE_v10032902mg [Citr... 176 9e-42
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch... 173 6e-41
gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao] 172 1e-40
>ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 176
Score = 242 bits (618), Expect = 1e-61
Identities = 135/178 (75%), Positives = 142/178 (79%), Gaps = 17/178 (9%)
Frame = -2
Query: 772 MMLSVAT---VNLVTPFSFSSQKQFSLPKIVSFTKRQQSISRPFNVLAV----------- 635
MM S+AT VN V +FSSQ QF PKIVSFTK Q S SR NV A+
Sbjct: 1 MMSSMATQPTVNWVP--AFSSQNQFFSPKIVSFTKGQ-SYSRRSNVSAIVPRRNLGVFAT 57
Query: 634 ---AAVSFVEKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIP 464
AAVSF E+TSTHDSISS S QKEKLGVV+KPLEKPRLVLKFIWMEKNIGISLDQVIP
Sbjct: 58 SAAAAVSFAEETSTHDSISSDSHQKEKLGVVVKPLEKPRLVLKFIWMEKNIGISLDQVIP 117
Query: 463 CHGTIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
HGTIPLSPYYFWPRKDAWE+LKVMLESKPWIS+KQ IILLNQATDIINLWQQSGGDL
Sbjct: 118 GHGTIPLSPYYFWPRKDAWEELKVMLESKPWISEKQTIILLNQATDIINLWQQSGGDL 175
>ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
lycopersicum]
Length = 176
Score = 239 bits (611), Expect = 7e-61
Identities = 133/178 (74%), Positives = 141/178 (79%), Gaps = 17/178 (9%)
Frame = -2
Query: 772 MMLSVAT---VNLVTPFSFSSQKQFSLPKIVSFTKRQQSISRPFNVLAV----------- 635
MMLS+AT VN V +FSSQ QF PK V FTK Q S SR NV A+
Sbjct: 1 MMLSMATQLTVNWVP--AFSSQNQFFSPKFVFFTKGQ-SFSRRSNVSAIVPRRNLGGFAT 57
Query: 634 ---AAVSFVEKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIP 464
AA+SF E+TST DSISS SLQKEKLGV++KPLEKPRLVLKFIWMEKNIGISLDQVIP
Sbjct: 58 SAAAALSFAEETSTRDSISSDSLQKEKLGVLVKPLEKPRLVLKFIWMEKNIGISLDQVIP 117
Query: 463 CHGTIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
HGTIPLSPYYFWPRKDAWE+LKVMLESKPWISQKQ IILLNQATDIINLWQQSGGDL
Sbjct: 118 GHGTIPLSPYYFWPRKDAWEELKVMLESKPWISQKQAIILLNQATDIINLWQQSGGDL 175
>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488272|ref|XP_003633730.1|
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
isoform 2 [Vitis vinifera]
Length = 176
Score = 194 bits (492), Expect = 4e-47
Identities = 96/146 (65%), Positives = 115/146 (78%)
Frame = -2
Query: 727 FSSQKQFSLPKIVSFTKRQQSISRPFNVLAVAAVSFVEKTSTHDSISSTSLQKEKLGVVI 548
F S SL S + + + P V+AVA + ++ +S+S++ L EKLGVV+
Sbjct: 32 FKSSNALSLYSTRSASTNLRLRASPAPVVAVAVSE--QSSAPQESLSASPLDVEKLGVVV 89
Query: 547 KPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDLKVMLESKPWI 368
KP+EKPRLVLKFIWMEKNIG++LDQ IP HGTIPLSPYYFWPRKDAWE++KV+LESKPWI
Sbjct: 90 KPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWI 149
Query: 367 SQKQMIILLNQATDIINLWQQSGGDL 290
SQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 150 SQKQMIILLNQATDIINLWQQSGGNL 175
>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 194 bits (492), Expect = 4e-47
Identities = 96/146 (65%), Positives = 115/146 (78%)
Frame = -2
Query: 727 FSSQKQFSLPKIVSFTKRQQSISRPFNVLAVAAVSFVEKTSTHDSISSTSLQKEKLGVVI 548
F S SL S + + + P V+AVA + ++ +S+S++ L EKLGVV+
Sbjct: 31 FKSSNALSLYSTRSASTNLRLRASPAPVVAVAVSE--QSSAPQESLSASPLDVEKLGVVV 88
Query: 547 KPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDLKVMLESKPWI 368
KP+EKPRLVLKFIWMEKNIG++LDQ IP HGTIPLSPYYFWPRKDAWE++KV+LESKPWI
Sbjct: 89 KPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWI 148
Query: 367 SQKQMIILLNQATDIINLWQQSGGDL 290
SQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 149 SQKQMIILLNQATDIINLWQQSGGNL 174
>gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus persica]
Length = 192
Score = 192 bits (488), Expect = 1e-46
Identities = 95/121 (78%), Positives = 108/121 (89%), Gaps = 3/121 (2%)
Frame = -2
Query: 643 LAVAAVSFV-EKTSTHDS--ISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQ 473
L+ AA S V E+T+ D + T L+KEKLGVV+KP+EKPRLVLKFIWMEKNIGI+LDQ
Sbjct: 71 LSAAAESLVAEETAAADDNLTTETPLEKEKLGVVVKPIEKPRLVLKFIWMEKNIGIALDQ 130
Query: 472 VIPCHGTIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGD 293
+IP HG+IPLSPYYFWPRKDAWE+LKV+LESKPWISQKQMIILLNQATDIINLWQQSGG+
Sbjct: 131 MIPGHGSIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGN 190
Query: 292 L 290
L
Sbjct: 191 L 191
>ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 182
Score = 190 bits (482), Expect = 6e-46
Identities = 90/118 (76%), Positives = 103/118 (87%)
Frame = -2
Query: 643 LAVAAVSFVEKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIP 464
L+ AA + V + + D +S EKLGVV+KP+EKPRLVLKFIWMEKNIGI+LDQ+IP
Sbjct: 64 LSAAAEALVAQETAADDVSPADDGTEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIP 123
Query: 463 CHGTIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
HG+IPLSPYYFWPRKDAWE+LKV+LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 124 GHGSIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 181
>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Cucumis
sativus]
Length = 192
Score = 189 bits (479), Expect = 1e-45
Identities = 93/117 (79%), Positives = 102/117 (87%)
Frame = -2
Query: 640 AVAAVSFVEKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPC 461
AV A S + DS+SS KEKLGVV+KP+EKPRLVLKFIWMEKNIGI+LDQ+IP
Sbjct: 77 AVEAASELLVADDSDSVSSPV--KEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPG 134
Query: 460 HGTIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
HGTIPLSPYYFWPRKDAWE+LKV+LESKPWISQKQMIILLNQATDIINLWQQ GG+L
Sbjct: 135 HGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNL 191
>gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 186 bits (471), Expect = 1e-44
Identities = 100/157 (63%), Positives = 113/157 (71%)
Frame = -2
Query: 760 VATVNLVTPFSFSSQKQFSLPKIVSFTKRQQSISRPFNVLAVAAVSFVEKTSTHDSISST 581
+ T P +FS+ S + S SR F + A A + E T+ DS T
Sbjct: 30 IQTSLFAKPRTFSNMNSRSFSEFKPTPTATHS-SRKFALSASAVAA--EDTTVDDS---T 83
Query: 580 SLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWED 401
EKLGVV+KP+ KPRL+LKFIWMEKNIGI LDQVIP HGTIPLSPYYFWPRKDAWE+
Sbjct: 84 VEDTEKLGVVVKPVAKPRLILKFIWMEKNIGIGLDQVIPGHGTIPLSPYYFWPRKDAWEE 143
Query: 400 LKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
LKV+LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 144 LKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 180
>ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 185 bits (469), Expect = 2e-44
Identities = 84/100 (84%), Positives = 95/100 (95%)
Frame = -2
Query: 589 SSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDA 410
SS SLQ +KLGVV+KP +KPRLVLKF+WMEKNIGI+LDQ++P HGT+PLSPYYFWPRKDA
Sbjct: 64 SSPSLQSQKLGVVVKPTDKPRLVLKFVWMEKNIGIALDQMVPGHGTVPLSPYYFWPRKDA 123
Query: 409 WEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
WE+LK +LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 124 WEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 163
>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
gi|217075300|gb|ACJ86010.1| unknown [Medicago
truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
protein [Medicago truncatula]
gi|388491518|gb|AFK33825.1| unknown [Medicago
truncatula]
Length = 161
Score = 181 bits (460), Expect = 2e-43
Identities = 95/153 (62%), Positives = 110/153 (71%), Gaps = 8/153 (5%)
Frame = -2
Query: 724 SSQKQFSLPKIVSFTKRQQSISRPFNV----LAVAAVSFVEKTSTHDSISSTSLQ----K 569
SS S+ ++ T + RP NV L + F + ++ SLQ
Sbjct: 7 SSSTTSSMSVLLPTTSKPLFSIRPNNVHMNKLKMKTNRFTVSAVVAEDAAAVSLQPPPQS 66
Query: 568 EKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDLKVM 389
+KLGVV+KP +KPRLVLKFIWMEKNIGI LDQ+IP HGTIPLSPYYFWPRKDAWE+LK +
Sbjct: 67 QKLGVVVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEELKEL 126
Query: 388 LESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 127 LESKPWISQKQMIILLNQATDIINLWQQSGGNL 159
>gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus vulgaris]
Length = 164
Score = 181 bits (459), Expect = 3e-43
Identities = 97/159 (61%), Positives = 112/159 (70%)
Frame = -2
Query: 766 LSVATVNLVTPFSFSSQKQFSLPKIVSFTKRQQSISRPFNVLAVAAVSFVEKTSTHDSIS 587
L+ ++ L SFS + P + T R F V A AA +T+ +
Sbjct: 17 LTFPSIKLNPSLSFSLLRSHLPPPTTTTTTR-------FTVAASAA-----ETAVVQEEA 64
Query: 586 STSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAW 407
+ Q EKLGVV+K EKPR+VLKFIWMEKNIGI+LDQ IP HGTIPLSPYYFWPRKDAW
Sbjct: 65 PPTPQPEKLGVVVKATEKPRIVLKFIWMEKNIGIALDQTIPGHGTIPLSPYYFWPRKDAW 124
Query: 406 EDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
E+LK +LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 125 EELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 163
>gb|AFK46934.1| unknown [Lotus japonicus]
Length = 175
Score = 181 bits (458), Expect = 4e-43
Identities = 88/115 (76%), Positives = 98/115 (85%)
Frame = -2
Query: 634 AAVSFVEKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHG 455
AAV+ E+ T S S +KLGVV+KP +KPRLVLKFIWMEKNIGI+LDQ +P HG
Sbjct: 65 AAVAVAEQDDT-----SLSPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHG 119
Query: 454 TIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
TIPLSPYYFWPRKDAWE+LK +LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 120 TIPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>gb|AFK41643.1| unknown [Lotus japonicus]
Length = 175
Score = 181 bits (458), Expect = 4e-43
Identities = 88/115 (76%), Positives = 98/115 (85%)
Frame = -2
Query: 634 AAVSFVEKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHG 455
AAV+ E+ T S S +KLGVV+KP +KPRLVLKFIWMEKNIGI+LDQ +P HG
Sbjct: 65 AAVAVAEQDDT-----SLSPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHG 119
Query: 454 TIPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
TIPLSPYYFWPRKDAWE+LK +LESKPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 120 TIPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
gi|255628049|gb|ACU14369.1| unknown [Glycine max]
Length = 158
Score = 181 bits (458), Expect = 4e-43
Identities = 83/95 (87%), Positives = 91/95 (95%)
Frame = -2
Query: 574 QKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDLK 395
Q EKLGVV+KP EKPRLVLKFIWMEKNIGI+LDQ++P HGTIPLSPYYFWPRKDAWE+LK
Sbjct: 63 QPEKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELK 122
Query: 394 VMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
+LE+KPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 123 ELLENKPWISQKQMIILLNQATDIINLWQQSGGNL 157
>gb|EOY04215.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
Length = 199
Score = 180 bits (457), Expect = 5e-43
Identities = 98/174 (56%), Positives = 125/174 (71%), Gaps = 8/174 (4%)
Frame = -2
Query: 787 IIS*KMMLSVATVNLVTP-----FSFSSQKQ-FSLPKIVSFTKRQQSISRPFNVLAVAAV 626
I++ KM+++ + + P SF SQ L K ++ + + ++++P V A
Sbjct: 25 ILTKKMLVTTSLQTYLKPPFKPLTSFPSQNPTLFLLKPLTVSPKTSNLAKPIISPQVKAK 84
Query: 625 SFV--EKTSTHDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGT 452
+ V ++ DS S +S KEKLGVV+KPLEKPR+VLKFIWMEK+IGI+LDQVIP HGT
Sbjct: 85 AQVLSDELPLDDSPSESSSYKEKLGVVVKPLEKPRVVLKFIWMEKDIGIALDQVIPGHGT 144
Query: 451 IPLSPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
IPLSPYYFWPRKDAWE+LKV+LE+KPWIS Q I LLNQATDIINLWQ SGG+L
Sbjct: 145 IPLSPYYFWPRKDAWEELKVLLENKPWISHMQRIHLLNQATDIINLWQTSGGNL 198
>sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 3;
Short=PSRP-3; Flags: Precursor
gi|7578871|gb|AAF64163.1|AF239218_1 plastid-specific
ribosomal protein 3 precursor [Spinacia oleracea]
Length = 179
Score = 178 bits (452), Expect = 2e-42
Identities = 80/96 (83%), Positives = 92/96 (95%)
Frame = -2
Query: 577 LQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDL 398
+ KEKL V++KP++KPRLVLKFIWMEKNIG++LDQ IP HGT+PLSPYYFWPRKDAWE+L
Sbjct: 82 VNKEKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIPGHGTVPLSPYYFWPRKDAWEEL 141
Query: 397 KVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
KV+LE+KPWISQKQMIILLNQATDIINLWQQSGG+L
Sbjct: 142 KVLLENKPWISQKQMIILLNQATDIINLWQQSGGNL 177
>ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
gi|550329750|gb|EEF02119.2| hypothetical protein
POPTR_0010s13740g [Populus trichocarpa]
Length = 189
Score = 177 bits (448), Expect = 5e-42
Identities = 90/153 (58%), Positives = 112/153 (73%)
Frame = -2
Query: 748 NLVTPFSFSSQKQFSLPKIVSFTKRQQSISRPFNVLAVAAVSFVEKTSTHDSISSTSLQK 569
NL+ +F +K+ K VS +R + + P + + T T +SI + +
Sbjct: 40 NLIHSSTFLDRKR----KRVSRNQRYTTFAAPEALTVETPIDTPPSTETEESIPTQ--ET 93
Query: 568 EKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDLKVM 389
EK V++K +EKPRLVLKFIWMEKNIG++LDQVIP HGT+PLSPY+FWPRKDAWE+LK
Sbjct: 94 EKAEVLVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEELKAT 153
Query: 388 LESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
LESKPWISQK+MIILLNQATDIINLWQQSGG+L
Sbjct: 154 LESKPWISQKKMIILLNQATDIINLWQQSGGNL 186
>ref|XP_006437701.1| hypothetical protein CICLE_v10032902mg [Citrus clementina]
gi|568861900|ref|XP_006484437.1| PREDICTED: 30S
ribosomal protein 3-1, chloroplastic-like isoform X1
[Citrus sinensis] gi|557539897|gb|ESR50941.1|
hypothetical protein CICLE_v10032902mg [Citrus
clementina]
Length = 174
Score = 176 bits (446), Expect = 9e-42
Identities = 97/164 (59%), Positives = 120/164 (73%), Gaps = 8/164 (4%)
Frame = -2
Query: 757 ATVN--LVTPFSFSSQKQFSLPK--IVSFTKRQQSISRPFNVLAVA---AVSFVEKTSTH 599
+TVN T SF SQK P + R + ISR ++A+A +++ E T+T
Sbjct: 9 STVNGAFTTRSSFPSQKLTVKPTKTTILHQNRTKPISRNQRLVALATPESLTAEEATTTS 68
Query: 598 -DSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWP 422
++I +T ++ +K GV +K LEKPRLVLKFIWMEKNIG++LDQ IP +GTIPLS Y+FWP
Sbjct: 69 TETIPATPVETKKAGVSVKQLEKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWP 128
Query: 421 RKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
RKDAWE+LK LESKPWISQK MIILLNQATDIINLWQQSGG+L
Sbjct: 129 RKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGNL 172
>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 180
Score = 173 bits (439), Expect = 6e-41
Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 11/171 (6%)
Frame = -2
Query: 769 MLSVATVNLVTPFSFSSQKQ-FSLPKI------VSFTKRQQSISRPFNVLAVA---AVSF 620
+L+ + V TPF S + F+ PKI + + ISR + A A++
Sbjct: 10 ILTYSPVPHRTPFCKSIKTSIFANPKISLLYSSTILDPKMRPISRNERLTTFASPEALTV 69
Query: 619 VEKTS-THDSISSTSLQKEKLGVVIKPLEKPRLVLKFIWMEKNIGISLDQVIPCHGTIPL 443
+KTS T + IS + EK+ V +K +EKPRLVLKFIWMEKNIG++LDQVIP HGTIPL
Sbjct: 70 EDKTSETEEPISDDII--EKVEVAVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTIPL 127
Query: 442 SPYYFWPRKDAWEDLKVMLESKPWISQKQMIILLNQATDIINLWQQSGGDL 290
SPY+FWPRKDAWE+LK LESKPWISQK+MIILLNQATDIINLWQQSGG+L
Sbjct: 128 SPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIINLWQQSGGNL 178
>gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
Length = 181
Score = 172 bits (437), Expect = 1e-40
Identities = 87/143 (60%), Positives = 104/143 (72%)
Frame = -2
Query: 718 QKQFSLPKIVSFTKRQQSISRPFNVLAVAAVSFVEKTSTHDSISSTSLQKEKLGVVIKPL 539
Q L K ++ T R + ++ + A + +TST I S + E VV+K +
Sbjct: 43 QSSTGLAKRITPTSRIERLTA-----SAAPETLTAETSTETEIPSVTTSPETEKVVVKQV 97
Query: 538 EKPRLVLKFIWMEKNIGISLDQVIPCHGTIPLSPYYFWPRKDAWEDLKVMLESKPWISQK 359
EK RLVLKFIWMEKNIG+ LDQVIP HGT+PLSPY+FWPRKDAWE+LK LESKPWISQK
Sbjct: 98 EKSRLVLKFIWMEKNIGLGLDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQK 157
Query: 358 QMIILLNQATDIINLWQQSGGDL 290
+MIILLNQATDIINLWQQSGG+L
Sbjct: 158 KMIILLNQATDIINLWQQSGGNL 180