BLASTX nr result
ID: Atropa21_contig00019041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00019041
(1583 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 132 5e-28
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 128 8e-27
gb|AAT38756.2| Putative methyltransferase family protein [Solanu... 122 3e-25
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 108 5e-21
emb|CCH50976.1| T4.15 [Malus x robusta] 105 7e-20
ref|WP_008409321.1| hypothetical protein [Bacillus isronensis] g... 102 6e-19
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 101 8e-19
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g... 100 2e-18
gb|EXB91952.1| hypothetical protein L484_001826 [Morus notabilis] 96 3e-17
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis] 95 7e-17
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 94 1e-16
emb|CBL94165.1| putative reverse transcriptase family member [Ma... 94 1e-16
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 94 2e-16
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 94 2e-16
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 94 2e-16
gb|EXB40965.1| Ras-related protein RABC1 [Morus notabilis] 92 6e-16
ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ... 92 8e-16
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 91 1e-15
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 91 1e-15
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 91 2e-15
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 132 bits (331), Expect = 5e-28
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR D IRNEVIR+KV VASV DK+REARLRWFGHV+RRC DAPVRRCE L
Sbjct: 171 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCADAPVRRCEGL 230
Query: 64 AITGVRRGRGRPKK 23
+ G RRGRGRPKK
Sbjct: 231 VVEGTRRGRGRPKK 244
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 128 bits (321), Expect = 8e-27
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR D IRNEVIR+KV VASV DK+REARLRWFGHVKRR DAPVRRCE +
Sbjct: 584 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVM 643
Query: 64 AITGVRRGRGRPKK 23
+ G RRGRGRPKK
Sbjct: 644 VVEGTRRGRGRPKK 657
>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
Length = 828
Score = 122 bits (307), Expect = 3e-25
Identities = 57/72 (79%), Positives = 61/72 (84%)
Frame = -2
Query: 238 MLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERLAI 59
MLRWMCGHTR D IRNEVIR+KV VASV DK+REARLRWFGHVKRR DA VRRCE + +
Sbjct: 3 MLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAAVRRCEVMVV 62
Query: 58 TGVRRGRGRPKK 23
G RRGRGRPKK
Sbjct: 63 EGTRRGRGRPKK 74
>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
Length = 213
Score = 108 bits (271), Expect = 5e-21
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR D IRNEVIR+KV VASV DK+REARLRWFGHVKRR DAPVRRCE +
Sbjct: 116 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVM 175
Query: 64 AITGVRRGRGRPK 26
+ RG K
Sbjct: 176 VVEASLPPRGSGK 188
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 105 bits (261), Expect = 7e-20
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR+D IRNE IR KV VA + KMRE +LRWFGHV+RR DAP+RRC+
Sbjct: 876 MRMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYG 935
Query: 64 AITGVRRGRGRPKKN*E 14
RRGRGRP+K E
Sbjct: 936 TEVQGRRGRGRPRKTLE 952
>ref|WP_008409321.1| hypothetical protein [Bacillus isronensis]
gi|405383715|gb|EKB43273.1| hypothetical protein
B857_03969 [Bacillus isronensis B3W22]
Length = 109
Score = 102 bits (253), Expect = 6e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Frame = -2
Query: 238 MLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERLAI 59
MLRWMCGHTR+D IRNE IR KV VA + KMRE RLRWFGHV+R DAP+RRC+
Sbjct: 1 MLRWMCGHTRKDKIRNEDIRGKVGVAEIEGKMRENRLRWFGHVQRMPTDAPIRRCDYGTE 60
Query: 58 TGVRRGRGRPKKN*E 14
RRGRGRP+K E
Sbjct: 61 VQGRRGRGRPRKTLE 75
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 101 bits (252), Expect = 8e-19
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR+D IRNE IR KV VA + MRE RLRWFGHV+RR AP+RRC+
Sbjct: 102 MRMLRWMCGHTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTYAPIRRCDYE 161
Query: 64 AITGVRRGRGRPKKN*E 14
RRGRGRP+K E
Sbjct: 162 TEVQGRRGRGRPRKTLE 178
>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
gi|405551390|gb|EKB47241.1| hypothetical protein
B879_04163 [Cecembia lonarensis LW9]
Length = 133
Score = 100 bits (249), Expect = 2e-18
Identities = 50/77 (64%), Positives = 57/77 (74%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLR MCGHTR+D IRNE I+ KV VA + KMRE RLRWFGHV+RR DAPVRRC+
Sbjct: 23 MRMLRGMCGHTRKDKIRNEDIQGKVGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCDYG 82
Query: 64 AITGVRRGRGRPKKN*E 14
RRGRGRP+K E
Sbjct: 83 TEVRGRRGRGRPRKTLE 99
>gb|EXB91952.1| hypothetical protein L484_001826 [Morus notabilis]
Length = 783
Score = 96.3 bits (238), Expect = 3e-17
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWM GHTR D IRNEVIR KV VA + DK+RE RLRW+GHV+RR +A VR E +
Sbjct: 1 MRMLRWMSGHTRMDRIRNEVIRSKVGVAPIEDKVREGRLRWYGHVQRRPLEAQVRAWEDI 60
Query: 64 AITGVRRGRGRPK 26
I RGRGRP+
Sbjct: 61 LIPNTMRGRGRPR 73
>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
Length = 1413
Score = 95.1 bits (235), Expect = 7e-17
Identities = 46/71 (64%), Positives = 53/71 (74%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWM G TR D I+NEVIR KV VA + DK+RE RLRWFGHV+RR +APVR E +
Sbjct: 989 MRMLRWMSGQTRMDRIKNEVIRSKVGVAPIEDKVREGRLRWFGHVQRRPLEAPVRAWEDI 1048
Query: 64 AITGVRRGRGR 32
I RRGRGR
Sbjct: 1049 LIPNTRRGRGR 1059
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 94.4 bits (233), Expect = 1e-16
Identities = 43/72 (59%), Positives = 54/72 (75%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTRRD +RN+ IRD+V VA +A+K+ + RLRWFGH++RR DAPV
Sbjct: 459 MRMLRWMCGHTRRDRVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLK 518
Query: 64 AITGVRRGRGRP 29
V+RGRGRP
Sbjct: 519 RAGNVKRGRGRP 530
>emb|CBL94165.1| putative reverse transcriptase family member [Malus domestica]
Length = 163
Score = 94.4 bits (233), Expect = 1e-16
Identities = 49/77 (63%), Positives = 53/77 (68%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLR MC HTR+D I NE IR KV VA V KMRE RLRWFGHV+R DAPVRRC
Sbjct: 54 IRMLRGMCRHTRKDKIVNEDIRGKVGVAEVEGKMRENRLRWFGHVQRMPTDAPVRRCNYE 113
Query: 64 AITGVRRGRGRPKKN*E 14
RRGRGRP+K E
Sbjct: 114 TEVRGRRGRGRPRKTLE 130
>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
Length = 1770
Score = 94.0 bits (232), Expect = 2e-16
Identities = 44/68 (64%), Positives = 51/68 (75%)
Frame = -2
Query: 229 WMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERLAITGV 50
WM GHTR D IRNEVIR KV VA + DK+RE RLRW+GHV+RR +APVR E + I
Sbjct: 1213 WMSGHTRMDRIRNEVIRSKVGVAPIEDKVREGRLRWYGHVQRRPLEAPVRAWEDILIPNT 1272
Query: 49 RRGRGRPK 26
RRGRGRP+
Sbjct: 1273 RRGRGRPR 1280
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 94.0 bits (232), Expect = 2e-16
Identities = 43/72 (59%), Positives = 54/72 (75%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTRRD +RN+ IRD+V VA +A+K+ + RLRWFGH++RR DAPV
Sbjct: 199 MRMLRWMCGHTRRDHVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLK 258
Query: 64 AITGVRRGRGRP 29
V+RGRGRP
Sbjct: 259 RAGNVKRGRGRP 270
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 94.0 bits (232), Expect = 2e-16
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCG TR+D IRNE IR++V VA + +KM E RLRWFGHV+RR D+ +RR +++
Sbjct: 268 MRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQM 327
Query: 64 AITGVRRGRGRPKK 23
RGRGRPKK
Sbjct: 328 ERRQTIRGRGRPKK 341
>gb|EXB40965.1| Ras-related protein RABC1 [Morus notabilis]
Length = 276
Score = 92.0 bits (227), Expect = 6e-16
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+ LRWM GHTR D IRNEVIR+KV VA + DK+REARLRW+GHV+RR +APVR E +
Sbjct: 89 IMALRWMSGHTRMDRIRNEVIRNKVGVAPIEDKVREARLRWYGHVQRRPLEAPVRAWEDI 148
Query: 64 AITGVRRGR 38
I RRGR
Sbjct: 149 LIPNTRRGR 157
>ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula]
gi|355477563|gb|AES58766.1| hypothetical protein
MTR_1g008050 [Medicago truncatula]
Length = 1675
Score = 91.7 bits (226), Expect = 8e-16
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWM G TR+D IRN+ IR++V VA + +K+ E RLRW GHV+RR DA VRR + +
Sbjct: 1287 MRMLRWMSGKTRQDRIRNDTIRERVGVAPIVEKLVENRLRWLGHVERRPVDAVVRRVDHM 1346
Query: 64 AITGVRRGRGRPKK 23
+ V+RGRGRPKK
Sbjct: 1347 EESQVKRGRGRPKK 1360
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Triticum urartu]
Length = 1028
Score = 90.9 bits (224), Expect = 1e-15
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR+D +RN+ IRD+V VA + +K+ + RLRWFGH++RR +APV
Sbjct: 659 MRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGRLK 718
Query: 64 AITGVRRGRGRP 29
V+RGRGRP
Sbjct: 719 RAENVKRGRGRP 730
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 90.9 bits (224), Expect = 1e-15
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
+RMLRWMCGHTR+D +RN+ IRD+V VA + +K+ + RLRWFGH++RR +APV
Sbjct: 2373 MRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGRLK 2432
Query: 64 AITGVRRGRGRP 29
V+RGRGRP
Sbjct: 2433 RAENVKRGRGRP 2444
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 90.5 bits (223), Expect = 2e-15
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = -2
Query: 244 VRMLRWMCGHTRRDMIRNEVIRDKVEVASVADKMREARLRWFGHVKRRCEDAPVRRCERL 65
V+MLRWM GHTR D IRNE IR++V VA + +K+ E+RLRWFGHV+RR + PVRR + +
Sbjct: 434 VKMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVDEM 493
Query: 64 AITGVRRGRGRPKK 23
+GRGRPKK
Sbjct: 494 EDGQRAKGRGRPKK 507