BLASTX nr result
ID: Atropa21_contig00018877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018877
(2166 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244008.1| PREDICTED: KH domain-containing protein At5g... 147 2e-32
ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g... 147 2e-32
ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g... 145 9e-32
ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g... 145 9e-32
ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g... 139 4e-30
gb|EMJ06848.1| hypothetical protein PRUPE_ppa009341mg [Prunus pe... 118 9e-24
ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g... 115 1e-22
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici... 111 1e-21
ref|XP_006452751.1| hypothetical protein CICLE_v10009077mg [Citr... 110 3e-21
ref|XP_006452750.1| hypothetical protein CICLE_v10009077mg [Citr... 110 3e-21
ref|XP_006452747.1| hypothetical protein CICLE_v10009077mg [Citr... 110 3e-21
ref|XP_004294880.1| PREDICTED: KH domain-containing protein At5g... 108 7e-21
ref|XP_006474774.1| PREDICTED: KH domain-containing protein At5g... 108 9e-21
ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g... 108 9e-21
ref|XP_006377999.1| hypothetical protein POPTR_0011s17110g [Popu... 107 2e-20
ref|XP_002330577.1| predicted protein [Populus trichocarpa] 107 2e-20
gb|EXB51069.1| KH domain-containing protein [Morus notabilis] 106 5e-20
ref|XP_002299073.2| KH domain-containing family protein [Populus... 106 5e-20
ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g... 106 5e-20
gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobro... 105 6e-20
>ref|XP_004244008.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 3
[Solanum lycopersicum]
Length = 264
Score = 147 bits (370), Expect = 2e-32
Identities = 72/76 (94%), Positives = 73/76 (96%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQELLRVTTLLGNASVLDQNGLEHASPLASGGM+S GGANV RWASPFQSEISGLMHSP
Sbjct: 35 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEISGLMHSP 94
Query: 2118 STQNWLNTHSNSSGLI 2165
STQNWLNT SNSSGLI
Sbjct: 95 STQNWLNTQSNSSGLI 110
>ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 2
[Solanum lycopersicum]
Length = 295
Score = 147 bits (370), Expect = 2e-32
Identities = 72/76 (94%), Positives = 73/76 (96%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQELLRVTTLLGNASVLDQNGLEHASPLASGGM+S GGANV RWASPFQSEISGLMHSP
Sbjct: 62 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEISGLMHSP 121
Query: 2118 STQNWLNTHSNSSGLI 2165
STQNWLNT SNSSGLI
Sbjct: 122 STQNWLNTQSNSSGLI 137
>ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X2
[Solanum tuberosum]
Length = 289
Score = 145 bits (365), Expect = 9e-32
Identities = 71/76 (93%), Positives = 72/76 (94%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQELLRVTTLLGNASVLDQNGLEHASPLASGGM+S GGANV RWASPF SEISGLMHSP
Sbjct: 62 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFHSEISGLMHSP 121
Query: 2118 STQNWLNTHSNSSGLI 2165
STQNWLNT SNSSGLI
Sbjct: 122 STQNWLNTQSNSSGLI 137
>ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X1
[Solanum tuberosum]
Length = 293
Score = 145 bits (365), Expect = 9e-32
Identities = 71/76 (93%), Positives = 72/76 (94%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQELLRVTTLLGNASVLDQNGLEHASPLASGGM+S GGANV RWASPF SEISGLMHSP
Sbjct: 62 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFHSEISGLMHSP 121
Query: 2118 STQNWLNTHSNSSGLI 2165
STQNWLNT SNSSGLI
Sbjct: 122 STQNWLNTQSNSSGLI 137
>ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 1
[Solanum lycopersicum]
Length = 299
Score = 139 bits (351), Expect = 4e-30
Identities = 72/84 (85%), Positives = 73/84 (86%), Gaps = 8/84 (9%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSE-------- 2093
LNQELLRVTTLLGNASVLDQNGLEHASPLASGGM+S GGANV RWASPFQSE
Sbjct: 62 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEVGEANNNK 121
Query: 2094 ISGLMHSPSTQNWLNTHSNSSGLI 2165
ISGLMHSPSTQNWLNT SNSSGLI
Sbjct: 122 ISGLMHSPSTQNWLNTQSNSSGLI 145
>gb|EMJ06848.1| hypothetical protein PRUPE_ppa009341mg [Prunus persica]
Length = 296
Score = 118 bits (296), Expect = 9e-24
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
+NQE+LRVTTLLGNASVL Q+GLEHASPLASGGM+S GGA+V WAS FQSE+SGL+
Sbjct: 69 INQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADVNGWASRFQSEMSGLLQPS 128
Query: 2118 STQNWLNTHSNSSGLI 2165
STQNWLN+ S+SSGLI
Sbjct: 129 STQNWLNSPSSSSGLI 144
>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
product [Vitis vinifera]
Length = 287
Score = 115 bits (287), Expect = 1e-22
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = +3
Query: 1896 PLLTGTSYSWKLTFLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWA 2075
P + +S++L LNQE+LRVTTLLGNAS+LDQ+GLEHASPLASGG++S GGANV WA
Sbjct: 51 PFMPVLPHSYRL--LNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWA 108
Query: 2076 SPFQSEISGLMHSPSTQNWLNTHSNSSGLI 2165
SPFQSE+SGL + QNWL + +SSGLI
Sbjct: 109 SPFQSEMSGL---SAAQNWLGSQGSSSGLI 135
>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527289|gb|EEF29442.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 300
Score = 111 bits (277), Expect = 1e-21
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = +3
Query: 1896 PLLTGTSYSWKLTFLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWA 2075
P + ++++L L+QE+LRVTTLLGNASVL Q+GLEHASPLASGGM+S GGA+ WA
Sbjct: 61 PFMPVLPHTYRL--LSQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADANGWA 118
Query: 2076 SPFQSEISGLMHSPSTQNWLNTHSNSSGLI 2165
S FQSE+SGL+ S QNWL++ +SSGLI
Sbjct: 119 SRFQSEMSGLIQPSSAQNWLSSQGSSSGLI 148
>ref|XP_006452751.1| hypothetical protein CICLE_v10009077mg [Citrus clementina]
gi|557555977|gb|ESR65991.1| hypothetical protein
CICLE_v10009077mg [Citrus clementina]
Length = 269
Score = 110 bits (274), Expect = 3e-21
Identities = 55/76 (72%), Positives = 64/76 (84%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE++RVTTLLGNASVL Q+GLEHASPL SGG++S GGA+V AS FQSEISGLM S
Sbjct: 42 LNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADVNGLASRFQSEISGLMQSS 101
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 102 SAQNWLSSQGSSSGLI 117
>ref|XP_006452750.1| hypothetical protein CICLE_v10009077mg [Citrus clementina]
gi|557555976|gb|ESR65990.1| hypothetical protein
CICLE_v10009077mg [Citrus clementina]
Length = 196
Score = 110 bits (274), Expect = 3e-21
Identities = 55/76 (72%), Positives = 64/76 (84%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE++RVTTLLGNASVL Q+GLEHASPL SGG++S GGA+V AS FQSEISGLM S
Sbjct: 65 LNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADVNGLASRFQSEISGLMQSS 124
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 125 SAQNWLSSQGSSSGLI 140
>ref|XP_006452747.1| hypothetical protein CICLE_v10009077mg [Citrus clementina]
gi|557555973|gb|ESR65987.1| hypothetical protein
CICLE_v10009077mg [Citrus clementina]
Length = 292
Score = 110 bits (274), Expect = 3e-21
Identities = 55/76 (72%), Positives = 64/76 (84%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE++RVTTLLGNASVL Q+GLEHASPL SGG++S GGA+V AS FQSEISGLM S
Sbjct: 65 LNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADVNGLASRFQSEISGLMQSS 124
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 125 SAQNWLSSQGSSSGLI 140
>ref|XP_004294880.1| PREDICTED: KH domain-containing protein At5g56140-like [Fragaria
vesca subsp. vesca]
Length = 297
Score = 108 bits (271), Expect = 7e-21
Identities = 53/76 (69%), Positives = 63/76 (82%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE+LRVTTLLGNASVL Q+GLEHASPLASGGM+S GGA++ WA+ FQSE+S L+ P
Sbjct: 69 LNQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADMDGWATRFQSEMSTLLQPP 128
Query: 2118 STQNWLNTHSNSSGLI 2165
TQNW + +SSGLI
Sbjct: 129 PTQNWHGSQGSSSGLI 144
>ref|XP_006474774.1| PREDICTED: KH domain-containing protein At5g56140-like [Citrus
sinensis]
Length = 292
Score = 108 bits (270), Expect = 9e-21
Identities = 54/76 (71%), Positives = 63/76 (82%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE++RVTTLLGNASVL Q+GLEHASPL SGG++S GGA+ AS FQSEISGLM S
Sbjct: 65 LNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSS 124
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 125 SAQNWLSSQGSSSGLI 140
>ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g56140-like [Cucumis
sativus] gi|449508337|ref|XP_004163285.1| PREDICTED: KH
domain-containing protein At5g56140-like [Cucumis
sativus]
Length = 296
Score = 108 bits (270), Expect = 9e-21
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE+LRVTTLLG ASVL Q+GLEHASPLASGG++S GGA++ W S FQSE+SGL+ +
Sbjct: 69 LNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSEMSGLLQAS 128
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL + +SSGLI
Sbjct: 129 SAQNWLTSQGSSSGLI 144
>ref|XP_006377999.1| hypothetical protein POPTR_0011s17110g [Populus trichocarpa]
gi|550328605|gb|ERP55796.1| hypothetical protein
POPTR_0011s17110g [Populus trichocarpa]
Length = 301
Score = 107 bits (267), Expect = 2e-20
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE+LRVTTLLGNASVL Q+GLEHASPL+SGG++S G A+ WAS FQSE+SG++
Sbjct: 74 LNQEILRVTTLLGNASVLGQSGLEHASPLSSGGIFSNGAADANGWASRFQSEMSGMLQPS 133
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 134 SAQNWLSSQGSSSGLI 149
>ref|XP_002330577.1| predicted protein [Populus trichocarpa]
Length = 301
Score = 107 bits (267), Expect = 2e-20
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE+LRVTTLLGNASVL Q+GLEHASPL+SGG++S G A+ WAS FQSE+SG++
Sbjct: 74 LNQEILRVTTLLGNASVLGQSGLEHASPLSSGGIFSNGAADANGWASRFQSEMSGMLQPS 133
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 134 SAQNWLSSQGSSSGLI 149
>gb|EXB51069.1| KH domain-containing protein [Morus notabilis]
Length = 307
Score = 106 bits (264), Expect = 5e-20
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
L+QE+LRVTTLLG ASVL Q+GLEHASPLASGG++S GGA+V WAS FQSE+S L+
Sbjct: 80 LSQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADVNGWASRFQSEMSSLLQPS 139
Query: 2118 STQNWLNTHSNSSGLI 2165
ST+NWL+ +SSGLI
Sbjct: 140 STKNWLSPQGSSSGLI 155
>ref|XP_002299073.2| KH domain-containing family protein [Populus trichocarpa]
gi|550350090|gb|EEE83878.2| KH domain-containing family
protein [Populus trichocarpa]
Length = 302
Score = 106 bits (264), Expect = 5e-20
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = +3
Query: 1938 LNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSP 2117
LNQE+LRVT LLGNASVL Q+GLEHASPLASGG++S G A+ WAS FQSE+SG++
Sbjct: 75 LNQEILRVTMLLGNASVLGQSGLEHASPLASGGIFSNGAADANGWASRFQSEMSGILQPS 134
Query: 2118 STQNWLNTHSNSSGLI 2165
S QNWL++ +SSGLI
Sbjct: 135 SAQNWLSSQGSSSGLI 150
>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine max]
Length = 291
Score = 106 bits (264), Expect = 5e-20
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +3
Query: 1941 NQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWASPFQSEISGLMHSPS 2120
NQE+LRVTTL+GNASVL Q+GLEHASPLA+GG++S GGA+V WAS FQSE L+ S S
Sbjct: 65 NQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGGADVNGWASRFQSERPSLLQSSS 124
Query: 2121 TQNWLNTHSNSSGLI 2165
TQNWL+ +SSG+I
Sbjct: 125 TQNWLSPQGSSSGII 139
>gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 312
Score = 105 bits (263), Expect = 6e-20
Identities = 54/90 (60%), Positives = 69/90 (76%)
Frame = +3
Query: 1896 PLLTGTSYSWKLTFLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMYSKGGANVGRWA 2075
P + ++++L LNQE+LRVTTLLGNASVL Q+GLE ASPLASGG+ S GGA++ W
Sbjct: 60 PFMPVLPHTYRL--LNQEILRVTTLLGNASVLGQSGLEQASPLASGGILSNGGADMNGWT 117
Query: 2076 SPFQSEISGLMHSPSTQNWLNTHSNSSGLI 2165
S FQSE+SGL+ S QNWL++ +SSGLI
Sbjct: 118 SRFQSEMSGLVQPSSAQNWLSSQGSSSGLI 147