BLASTX nr result
ID: Atropa21_contig00018096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018096
(735 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 45 4e-09
emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera] 44 6e-09
ref|XP_006354297.1| PREDICTED: uncharacterized protein LOC102601... 53 6e-08
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 58 1e-07
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 59 2e-06
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 59 2e-06
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera] 46 2e-06
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 45 3e-06
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 58 4e-06
gb|AAK29467.1| polyprotein-like [Solanum chilense] 51 4e-06
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 57 5e-06
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 57 5e-06
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 49 8e-06
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 45.1 bits (105), Expect(2) = 4e-09
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -1
Query: 624 YQLVSVTKKSNNKLDEECNLLYRHVCDFIRQ*VDDNVL 511
Y LV ++K NK D + +LL+RHVC +IRQ VD+NVL
Sbjct: 33 YLLVFASEKPENKTDAKWDLLHRHVCGYIRQWVDNNVL 70
Score = 42.4 bits (98), Expect(2) = 4e-09
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -3
Query: 718 MEVNTSKMVTLSGVNYAI*KGKIKDLLYVK 629
ME NTS+M+T++G NY + KGK++DLLY K
Sbjct: 1 MESNTSRMITVNGSNYHVWKGKMEDLLYAK 30
>emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
Length = 1144
Score = 43.5 bits (101), Expect(2) = 6e-09
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = -3
Query: 718 MEVNTSKMVTLSGVNYAI*KGKIKDLLYVK 629
ME NTS+M+TL+G NY + KGK++DLLYV+
Sbjct: 1 MESNTSRMITLNGSNYHVWKGKMEDLLYVQ 30
Score = 43.5 bits (101), Expect(2) = 6e-09
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -1
Query: 624 YQLVSVTKKSNNKLDEECNLLYRHVCDFIRQ*VDDNVL 511
Y V ++K NK D E NLL+R VC +I+Q VDDNVL
Sbjct: 33 YLPVFASEKPENKTDAEWNLLHRQVCGYIKQWVDDNVL 70
>ref|XP_006354297.1| PREDICTED: uncharacterized protein LOC102601066 [Solanum tuberosum]
Length = 1135
Score = 53.1 bits (126), Expect(2) = 6e-08
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -1
Query: 318 SICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLDFNNAKLEK 169
SI +N +++D+ S+LWH+RLSH+SEK +N +AKK LL AKL K
Sbjct: 809 SIFRGSVNLVENDTSSLLWHRRLSHMSEKGMNNLAKKNLLYGVKQAKLNK 858
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3
Query: 391 WKLTKGSLIVARGKKI 344
WKLT+GS++VARG K+
Sbjct: 785 WKLTRGSMVVARGDKL 800
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 54.7 bits (130), Expect(2) = 1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -1
Query: 336 LDWTTSSICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLDFNNAKLEK 169
L WT + + + +NA+ D+ LWH+RLSHISEK LN +AKK +L NA+LEK
Sbjct: 395 LYWTKALVAKDSVNAMDMDAS--LWHRRLSHISEKGLNCLAKKDVLSGLKNAELEK 448
Score = 27.7 bits (60), Expect(2) = 1e-07
Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 3/23 (13%)
Frame = -3
Query: 391 WKLTKGSLIVARG---KKILWSR 332
WKL++G+LIVA+G K+ W++
Sbjct: 377 WKLSRGNLIVAKGDRISKLYWTK 399
Score = 58.2 bits (139), Expect = 3e-06
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = -1
Query: 189 NNAKLEKWRLTKSFLIMALGKKHCGIYWTTASIYSNMVNAVESDGIFI*WHKRLSHISEK 10
N+ L KW+L++ LI+A G + +YWT A + + VNA++ D WH+RLSHISEK
Sbjct: 370 NHFGLGKWKLSRGNLIVAKGDRISKLYWTKALVAKDSVNAMDMDASL--WHRRLSHISEK 427
Query: 9 *LN 1
LN
Sbjct: 428 GLN 430
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 58.9 bits (141), Expect = 2e-06
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = -1
Query: 315 ICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLD-----FNNAKLEKWRLTKS 151
+C MN +K L + + H+ + LN+++ KL + F+N + W+LTK
Sbjct: 336 VCLETMNGMK------LLLRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQ---WKLTKG 386
Query: 150 FLIMALGKKHCGIYWTTASIYSNMVNAVESDGIFI*WHKRLSHISEK 10
L++A G K +Y T ASI ++N E+D WH+RL H+SEK
Sbjct: 387 SLMVARGTKQSKLYVTQASISQQVINVAENDSNIKLWHRRLGHMSEK 433
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -1
Query: 291 IKSDSFSILWHKRLSHISEK*LNIVAKKKLLLD--FNNAKLEKWRLTKSFLIMALGKKHC 118
+++ + ++L K + HI + +N+++ +KL + N + +W LT+ +++A G K
Sbjct: 289 LETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVIAKGNKSS 348
Query: 117 GIYWTTASIYSNMVNAVESDGIFI*WHKRLSHISEK 10
+Y A + + +NAV+ D F WH RL H+SEK
Sbjct: 349 SLYLMQARVIDSNINAVDDDSTFELWHNRLGHMSEK 384
>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = -1
Query: 351 KKYYGLDWTTSSICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLDFNNAKLE 172
KK Y L + + + +N + DS LWH RL H+SEK L I+AKK LL L+
Sbjct: 73 KKCYSLYLMQARVIDSSINVVDDDSTVELWHNRLDHMSEKGLMILAKKNLLSSMKKGFLK 132
Query: 171 K 169
+
Sbjct: 133 R 133
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = -3
Query: 508 VRIVIFKIENIIEVNSESDLNILSAIIVGSE---NSLRVP*LWKLTKGSLIVARGKK 347
+ +++ +++I+++ +N++S + E N+ R WKLTKGS++VA+GKK
Sbjct: 23 IMLILKNVKHILDIR----MNLISTGKLDDEGFCNTFRDS-QWKLTKGSMVVAKGKK 74
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -3
Query: 718 MEVNTSKMVTLSGVNYAI*KGKIKDLLYVKKL 623
ME NTS MV L+G NY I K K+KDLL+VKKL
Sbjct: 1 METNTSNMVRLNGRNYHIWKAKMKDLLFVKKL 32
Score = 33.5 bits (75), Expect(2) = 3e-06
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 615 VSVTKKSNNKLDEECNLLYRHVCDFIRQ*VDDNVL 511
V + K N DEE + ++ VC +IRQ V+DNVL
Sbjct: 36 VFASAKPENMSDEEWDFEHQQVCGYIRQWVEDNVL 70
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = -1
Query: 321 SSICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLDFNNAKLEK 169
SS+ + +N ++ + S LWHKRL H+S K ++ +AKK L AKL+K
Sbjct: 401 SSVSDDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDK 451
Score = 31.2 bits (69), Expect(2) = 8e-06
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -3
Query: 391 WKLTKGSLIVARGKK 347
WK+TKGSL+VARG K
Sbjct: 378 WKITKGSLVVARGNK 392
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 57.8 bits (138), Expect = 4e-06
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -1
Query: 291 IKSDSFSILWHKRLSHISEK*LNIVAKKKLLLD--FNNAKLEKWRLTKSFLIMALGKKHC 118
+++ + ++L K + HI + +N+++ KL + +N + +W+LT+ +++A G K
Sbjct: 220 LETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVIAKGNKSS 279
Query: 117 GIYWTTASIYSNMVNAVESDGIFI*WHKRLSHISEK 10
+Y + + +NAV+ D F WH RL H+SEK
Sbjct: 280 SLYLMQTRVIDSSINAVDDDSTFELWHNRLGHMSEK 315
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 51.2 bits (121), Expect(2) = 4e-06
Identities = 30/90 (33%), Positives = 46/90 (51%)
Frame = -1
Query: 327 TTSSICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLDFNNAKLEKWRLTKSF 148
T + IC +NA ++ + LWHKR+ H SEK L I++KK L+ K K
Sbjct: 405 TNAEICQGELNAAHEENSADLWHKRMGHTSEKGLQILSKKSLI------SFTKGTTIKPC 458
Query: 147 LIMALGKKHCGIYWTTASIYSNMVNAVESD 58
GK+H + T++ SN+++ V SD
Sbjct: 459 NYWLFGKQHRVSFQTSSERKSNILDLVYSD 488
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -3
Query: 391 WKLTKGSLIVARG 353
W+LTKG+L++A+G
Sbjct: 384 WRLTKGALVIAKG 396
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 57.4 bits (137), Expect = 5e-06
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -1
Query: 291 IKSDSFSILWHKRLSHISEK*LNIVAKKKLLLD--FNNAKLEKWRLTKSFLIMALGKKHC 118
+++ + ++L K + HI + +N+++ KL + N + +W+LT+ +++A G K
Sbjct: 317 LETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSS 376
Query: 117 GIYWTTASIYSNMVNAVESDGIFI*WHKRLSHISEK 10
+Y A + + +NAV+ D F WH +L H+SEK
Sbjct: 377 SLYLMQARVIDSSINAVDDDSTFELWHNKLGHMSEK 412
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 57.4 bits (137), Expect = 5e-06
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = -1
Query: 291 IKSDSFSILWHKRLSHISEK*LNIVAKKKLLLD--FNNAKLEKWRLTKSFLIMALGKKHC 118
+++ + ++L K + HI + +N+++ KL + N + +W+LT+ + +A G K
Sbjct: 204 LETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKSS 263
Query: 117 GIYWTTASIYSNMVNAVESDGIFI*WHKRLSHISEK 10
+Y A + + +NAV+ D F WH RL H+SEK
Sbjct: 264 SLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEK 299
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 48.9 bits (115), Expect(2) = 8e-06
Identities = 30/90 (33%), Positives = 45/90 (50%)
Frame = -1
Query: 327 TTSSICSNMMNAIKSDSFSILWHKRLSHISEK*LNIVAKKKLLLDFNNAKLEKWRLTKSF 148
T + IC +NA + + LWHKR+ H+SEK L I+AKK L+ K K
Sbjct: 404 TNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLI------SYAKGTTVKPC 457
Query: 147 LIMALGKKHCGIYWTTASIYSNMVNAVESD 58
GK+H + T++ N+++ V SD
Sbjct: 458 DYCLFGKQHRVSFQTSSERKLNILDLVYSD 487
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = -3
Query: 391 WKLTKGSLIVARG 353
W+LTKGSL++A+G
Sbjct: 383 WRLTKGSLVIAKG 395