BLASTX nr result
ID: Atropa21_contig00017954
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00017954
(835 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 91 1e-31
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 84 7e-29
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 84 3e-27
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 77 4e-22
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 91 7e-19
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 80 4e-18
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 90 9e-16
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 61 6e-14
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 62 2e-13
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 51 1e-12
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 61 5e-12
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 60 1e-11
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 62 2e-11
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 52 9e-11
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 63 9e-11
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 51 3e-10
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 71 5e-10
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 49 2e-09
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 44 4e-09
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 50 9e-09
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 91.3 bits (225), Expect(2) = 1e-31
Identities = 45/130 (34%), Positives = 76/130 (58%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*QEPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGKRST 654
F+S+A I + G LQQ I +W + +L +I +AV A+I+WEL KRRN+ ++G + +
Sbjct: 562 FASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTY 621
Query: 653 GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVC 474
+ Y + ++V ++ P +K + + W ++ ML+ +P V + P +GW+ C
Sbjct: 622 NNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTC 681
Query: 473 NTDGASKRKP 444
NTDGASK P
Sbjct: 682 NTDGASKGNP 691
Score = 72.8 bits (177), Expect(2) = 1e-31
Identities = 35/102 (34%), Positives = 63/102 (61%)
Frame = -1
Query: 454 RGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQT 275
+GNP S YG+C+R+ G+L +A+A +I TTN EAE + +A+++C + + ++T
Sbjct: 688 KGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLET 747
Query: 274 DSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
DS +Q +++ K P + + +EEI E+ + ++V HV R
Sbjct: 748 DSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYR 789
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 84.3 bits (207), Expect(3) = 7e-29
Identities = 45/130 (34%), Positives = 71/130 (54%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*QEPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGKRST 654
F++ A I +EG L Q +I+W + LK + + VP ++IW L KRRN +K+G S
Sbjct: 51 FANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSY 110
Query: 653 GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVC 474
++Y V +++ ++ P L+ P KW ++ LE +P V K PP+G + C
Sbjct: 111 NNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTC 169
Query: 473 NTDGASKRKP 444
NTD AS+ P
Sbjct: 170 NTDVASRCNP 179
Score = 67.4 bits (163), Expect(3) = 7e-29
Identities = 41/102 (40%), Positives = 59/102 (57%)
Frame = -1
Query: 454 RGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQT 275
R NP S YGFCLRNS G+L + Q ++I+ TN E E AI E + +C + + ++T
Sbjct: 176 RCNPEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHCVTKGVMKACLET 235
Query: 274 DSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
DSQ++ +IL+ I + P I IE+I L + V HV R
Sbjct: 236 DSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYR 277
Score = 23.1 bits (48), Expect(3) = 7e-29
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 153 REGNQLVDALANQALDN 103
REGN L D LAN A N
Sbjct: 277 REGNTLADYLANLAFFN 293
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 83.6 bits (205), Expect(2) = 3e-27
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Frame = -3
Query: 809 MEGPPLQQR--IIRW*QEPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGKRSTGRVIYL 636
+EGP LQ + I +W + +L+ +F A+P I+WE K RNT+K+GGK S ++
Sbjct: 28 IEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGKISRYNMLAE 87
Query: 635 VYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPD-GWIVCNTDGA 459
+ NI + +VR P L+ +P W +M++ E + TKVI PP+ G CNTD A
Sbjct: 88 ITRNIHNLAMVRYPWLRNIPKDWSMMVKFFE-NYISVLATKVIYWVPPNMGVYKCNTDCA 146
Query: 458 SKRKP 444
SK P
Sbjct: 147 SKGNP 151
Score = 65.5 bits (158), Expect(2) = 3e-27
Identities = 35/102 (34%), Positives = 60/102 (58%)
Frame = -1
Query: 454 RGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQT 275
+GNP S GFC+RN G + ++++ T+ EAEV A +++C + + +I++T
Sbjct: 148 KGNPRPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILET 207
Query: 274 DSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
DS ++ +IL I + P IS I++IQ L+ +V +HV R
Sbjct: 208 DSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFR 249
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 77.4 bits (189), Expect(3) = 4e-22
Identities = 42/102 (41%), Positives = 60/102 (58%)
Frame = -1
Query: 454 RGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQT 275
+GNPG+S Y +CLR+ GNL +AQAE+I TTN EAE AI EA+ +C + I+T
Sbjct: 751 KGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYHCTTRGFSRVTIET 810
Query: 274 DSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
DS L++ IL + P +I +E+ L + V H+ R
Sbjct: 811 DSLLLKNILQGNWEIPWNIRIIVEDTLTLMQYSTVNIEHIYR 852
Score = 52.0 bits (123), Expect(3) = 4e-22
Identities = 27/77 (35%), Positives = 38/77 (49%)
Frame = -3
Query: 668 GKRSTGRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPD 489
G + +++Y V N+ + PS+KQ P W M++ LE +P K+I P
Sbjct: 680 GNMTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNS 739
Query: 488 GWIVCNTDGASKRKPWK 438
CNTDGASK P K
Sbjct: 740 NTRKCNTDGASKGNPGK 756
Score = 22.3 bits (46), Expect(3) = 4e-22
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 153 REGNQLVDALANQA 112
REGN L D LAN A
Sbjct: 852 REGNTLADYLANYA 865
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 90.9 bits (224), Expect(3) = 7e-19
Identities = 47/102 (46%), Positives = 71/102 (69%)
Frame = -1
Query: 454 RGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQT 275
+GNPG S YG+CLRNS G+L AE+I ITTN EAE+RAI+EA++YC N+ M II+++
Sbjct: 36 KGNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAILEAIRYCVNKKMRKIILES 95
Query: 274 DSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
DS L+ +I++E K I++ +E+++ +EV H+ R
Sbjct: 96 DSLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHIYR 137
Score = 25.8 bits (55), Expect(3) = 7e-19
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 497 PPDGWIVCNTDGASKRKP 444
P + I CNTDGASK P
Sbjct: 22 PHEDVIKCNTDGASKGNP 39
Score = 24.3 bits (51), Expect(3) = 7e-19
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 153 REGNQLVDALANQALDN 103
REGN+L D LAN A+++
Sbjct: 137 REGNKLADYLANLAINS 153
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 80.1 bits (196), Expect(2) = 4e-18
Identities = 38/102 (37%), Positives = 63/102 (61%)
Frame = -1
Query: 454 RGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQT 275
+GNP +S YGFC+RN G L +A+ + I +TTN +AE AI +A++YC ++ + ++T
Sbjct: 36 KGNPDQSSYGFCIRNHTGELLYAEVQSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLET 95
Query: 274 DSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
DS ++ IL K P + + +E+I E+ M+V H+ R
Sbjct: 96 DSLTLKNILVRNWKTPWELVERVEDILEIMSHMDVTIKHIFR 137
Score = 38.5 bits (88), Expect(2) = 4e-18
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = -3
Query: 560 MIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGASKRKP 444
M+ +L+ +PT V K P GWI CNTDGASK P
Sbjct: 1 MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNP 39
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 90.1 bits (222), Expect = 9e-16
Identities = 46/113 (40%), Positives = 72/113 (63%)
Frame = -1
Query: 487 DGLCVTLMELLRGNPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCK 308
DG C RGNPG S +GFC+R+ G+L +A+A+ I I TN EAE AI+ A++ C
Sbjct: 713 DGAC-------RGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECS 765
Query: 307 NELMDHIIIQTDSQLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKR 149
N M +II+TDS +++I+ + + P I++ +EEI+E+ E ++ TH+ R
Sbjct: 766 NRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFR 818
Score = 87.0 bits (214), Expect = 7e-15
Identities = 46/130 (35%), Positives = 77/130 (59%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*QEPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGKRST 654
F+ FA I+++G LQQ II W + T +L+ I++A+PAII+W L KRRN +K+ S
Sbjct: 591 FAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISW 650
Query: 653 GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVC 474
R++ +V ++++V + P +K + W+ +IQ L + + +V K P D ++
Sbjct: 651 ERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKS 710
Query: 473 NTDGASKRKP 444
NTDGA + P
Sbjct: 711 NTDGACRGNP 720
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 60.8 bits (146), Expect(2) = 6e-14
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -3
Query: 797 PLQQRIIRW*QEPTTRRLKK-IFQAVPAIIIWEL*KRRNTIKYGGKRST-GRVIYLVYAN 624
PL+ I+RW P K I + P I W L K R +KYGGK+S RV +LV +
Sbjct: 972 PLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILD 1031
Query: 623 IQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGASKRKP 444
+++ P + P +W ++E K+T V PP W+ NTDG++ P
Sbjct: 1032 NFKLLHTVFPYISW-PLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNP 1090
Score = 43.5 bits (101), Expect(2) = 6e-14
Identities = 24/87 (27%), Positives = 44/87 (50%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
NPG G +RN G + A + + TN +AEV A + + +C + + +I++ DS
Sbjct: 1089 NPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDS 1148
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQEL 188
QL+ P +IS ++++ +L
Sbjct: 1149 QLLVDWFKNNKLIPWNISSQMQQLHQL 1175
Score = 57.8 bits (138), Expect = 5e-06
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 794 LQQRIIRW*Q-EPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGKRST-GRVIYLVYANI 621
L Q I++W + + I QA P I W L K R KYGGK+S RV Y +Y +
Sbjct: 677 LPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNRCASKYGGKQSNISRVKYAIYKDN 736
Query: 620 QRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGASKRKP 444
+++ P +K P W ++Q+ E K+T V P W+ NTDG++ P
Sbjct: 737 YKLMTTTFPQIKW-PSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNP 794
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 61.6 bits (148), Expect(2) = 2e-13
Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Frame = -3
Query: 815 IHMEGPPLQQRIIRW*QEPTTRRLKKI-FQAVPAIIIWEL*KRRNTIKYGGKR-STGRVI 642
+H + L+ ++ W P +++K+ +Q +P I W L K R +K+G K+ ST RV
Sbjct: 729 VHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRVQ 788
Query: 641 YLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDG 462
Y ++ + + V+V P++ + + +++I + E + K+TKV+ + P G NTDG
Sbjct: 789 YAIFKDTMQAVMVAFPNISR-QNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDG 847
Query: 461 AS 456
++
Sbjct: 848 SA 849
Score = 40.8 bits (94), Expect(2) = 2e-13
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = -1
Query: 427 GFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDSQLIQRIL 248
G LR+ G L +A A I TN AE++A + + +C+ II++ DS+L+ + +
Sbjct: 859 GGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWI 918
Query: 247 SEI*KPP*HISQWIEEIQELKEGME 173
P I +IQ++ ME
Sbjct: 919 DNSINIPWRCQPTIYQIQDIVNKME 943
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 51.2 bits (121), Expect(2) = 1e-12
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = -3
Query: 743 KKIFQAVPAIIIWEL*KRRNTIKYGGKRST-GRVIYLVYANIQRIVLVRNPSLKQVPHKW 567
K I +P II W L K R + KYG K S+ RV ++ +I +I+ P++ W
Sbjct: 133 KLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQIIKAVYPNIPW-QSSW 191
Query: 566 EIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGASKRKPWK 438
E + ++E + K+T V + PP+G NTDG++K K
Sbjct: 192 ERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGK 234
Score = 48.5 bits (114), Expect(2) = 1e-12
Identities = 27/93 (29%), Positives = 49/93 (52%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
N G+ G LR+ G L +A A + TN AE++A + +++C+ + II++ DS
Sbjct: 231 NTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDS 290
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQELKEGMEV 170
+L+ + + P +I++IQ + MEV
Sbjct: 291 ELLHKWIINKSSVPWRCLHYIQQIQNISNKMEV 323
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 60.8 bits (146), Expect(2) = 5e-12
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = -3
Query: 773 W*QEPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGK-RSTGRVIYLVYANIQRIVLVRN 597
W +P K + QA P I W L K R KYGGK + RV Y +Y + +++
Sbjct: 202 WTTKPNNAGHKLLLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSF 261
Query: 596 PSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGAS 456
PS+ P W +I E K+ KV PPD WI NTDG++
Sbjct: 262 PSINW-PANWTTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSA 307
Score = 37.0 bits (84), Expect(2) = 5e-12
Identities = 20/87 (22%), Positives = 46/87 (52%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
N G+ G +R+ G + A + + +N +AE+ A + + + +I+++ DS
Sbjct: 310 NEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDS 369
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQEL 188
QL+ + +S PP +++ +E +Q++
Sbjct: 370 QLVVQWISNKIAPPWNLTNQLERLQQI 396
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 60.5 bits (145), Expect(2) = 1e-11
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRS 657
F++ A + + LQ R+ +W + ++ QA P I W L K R KYGGK +
Sbjct: 488 FAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKAT 547
Query: 656 T-GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWI 480
RV Y VY + +++ P + Q P W +I E + K+ +V+ PP+ WI
Sbjct: 548 NISRVKYAVYKDNFKMMKNAFPHI-QWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWI 606
Query: 479 VCNTDGASKRKP 444
NTDG++ P
Sbjct: 607 KINTDGSALTNP 618
Score = 35.8 bits (81), Expect(2) = 1e-11
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
NPG G +RN G L A A + +N +AE A + + + +II++ DS
Sbjct: 617 NPGNIGAGGIIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALELGYRNIIMELDS 676
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQEL 188
QLI + +S+ +S IE +Q L
Sbjct: 677 QLIVQWISKKSVHHWSVSNQIERLQYL 703
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 61.6 bits (148), Expect(2) = 2e-11
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRS 657
F++ A + + LQ R+ +W + ++ QA P I W L K R KYGGK +
Sbjct: 488 FAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKAT 547
Query: 656 T-GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWI 480
RV Y+VY + +++ P + Q P W +I E + K+ +V+ PP+ WI
Sbjct: 548 NISRVKYVVYKDNFKMMKNAFPHI-QWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWI 606
Query: 479 VCNTDGASKRKPWK 438
NTDG++ P K
Sbjct: 607 KINTDGSALTNPGK 620
Score = 34.3 bits (77), Expect(2) = 2e-11
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
NPG+ G +RN G L A A + T +A+ A + + + +II++ DS
Sbjct: 617 NPGKIGAGGIIRNKEGKLVMAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDS 676
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQEL 188
QLI + +S+ +S IE +Q L
Sbjct: 677 QLIVQWISKKSVHHWSVSNQIERLQYL 703
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 51.6 bits (122), Expect(2) = 9e-11
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = -3
Query: 794 LQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRS-TGRVIYLVYANI 621
L+ +++ W + + K+ +P +I W L K R +KYG KRS RV Y ++ +
Sbjct: 441 LRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKEV 500
Query: 620 QRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGAS 456
+I+ + PS+ + W ++ ++E +KI V P G NTDG++
Sbjct: 501 MQIIKLVFPSIPWQAN-WNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSA 554
Score = 42.0 bits (97), Expect(2) = 9e-11
Identities = 23/97 (23%), Positives = 48/97 (49%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
N G++ G LR+ G + +A + + TN AE++A + +++C+ + ++ DS
Sbjct: 557 NSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKKVELEVDS 616
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTH 158
+L+ + K P +++IQ++ ME H
Sbjct: 617 ELLFNWIKNTTKIPWRYEDLVQQIQQISMKMEQFQCH 653
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 62.8 bits (151), Expect(2) = 9e-11
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*Q-EPTTRRLKKIFQAVPAIIIWEL*KRRNTIKYGGKRS 657
F++ A + + +Q R+ +W P + + QA+P I+W L K R KYGGK +
Sbjct: 113 FTTTAGLQEDQSSVQARLRQWWTARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKST 172
Query: 656 T-GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWI 480
RV Y VY + +++ + P + P W +IQ E + K+ PP+ WI
Sbjct: 173 NISRVKYAVYKDTFKMLKIAFPRVNW-PGNWAALIQTAERCKHEIKVCMTTWNRPPEQWI 231
Query: 479 VCNTDGAS 456
NTDG++
Sbjct: 232 KINTDGSA 239
Score = 30.8 bits (68), Expect(2) = 9e-11
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
N G G +R+ G + A A + TN +AE A + + + +I+I+ DS
Sbjct: 242 NTGHCGAGGIIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDS 301
Query: 268 QLIQRILSEI*KPP*HISQWIEE 200
QL+ +S+ P + W+ +
Sbjct: 302 QLVVHWISKKEPPIGMEANWVAD 324
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 51.2 bits (121), Expect(2) = 3e-10
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = -3
Query: 794 LQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRST-GRVIYLVYANI 621
L+ +++ W + + K+ +P II W L K R +KYG KRS+ RV Y ++ +
Sbjct: 1059 LRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEV 1118
Query: 620 QRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGAS 456
+++ + PS+ W ++ ++E +KI V P G NTDG++
Sbjct: 1119 MQVIKLVFPSIPW-QSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSA 1172
Score = 40.4 bits (93), Expect(2) = 3e-10
Identities = 24/102 (23%), Positives = 49/102 (48%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
N G+ G LR+ G + +A + + TN AE++A + +++C+ + ++ +S
Sbjct: 1175 NSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCEQHGYKKVELEVNS 1234
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKRRE 143
+L+ + K P +++IQ++ ME H RE
Sbjct: 1235 ELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFHCHHIYRE 1276
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 70.9 bits (172), Expect = 5e-10
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -3
Query: 833 FSSFACIHMEGPPLQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRS 657
FS+ A + E P LQ R+ +W T ++ QA P + W L K R KYGGK +
Sbjct: 29 FSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTFVCWNLWKNRCACKYGGKAT 88
Query: 656 T-GRVIYLVYANIQRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWI 480
RV Y +Y + +++ P +K P W + Q E + K+ KV PP+ WI
Sbjct: 89 NISRVKYAIYKDTFKMLQNTFPHIKW-PSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWI 147
Query: 479 VCNTDGASKRKPWK 438
NTDG++ P K
Sbjct: 148 KINTDGSAINNPGK 161
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 48.5 bits (114), Expect(2) = 2e-09
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = -3
Query: 794 LQQRIIRW*QEPTTRRLKKIFQAV-PAIIIWEL*KRRNTIKYGGK-RSTGRVIYLVYANI 621
L+ +++W P++ ++ K+ ++ P I W L K +KYG K S RV Y ++ ++
Sbjct: 681 LRSLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCAVKYGNKISSIQRVQYGIFKDV 740
Query: 620 QRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGAS 456
+ + + P++ H W +I ++E + K+ V + P G NTDG++
Sbjct: 741 MQTIKIVFPNIPW-QHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSA 794
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = -1
Query: 427 GFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDSQLIQRIL 248
G LR+ G L +A + + TN AE+ A + +C+ I+++ DS+++Q+ +
Sbjct: 804 GGILRDYTGKLHYAFSIPFGLGTNNIAEMEAARYGLDWCEQHGYKSILLEVDSEILQKWI 863
Query: 247 SEI*KPP*HISQWIEEIQELKEGME 173
S P Q IE IQ++ M+
Sbjct: 864 SNTIAIPWRYQQTIEHIQDIGRKMD 888
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 44.3 bits (103), Expect(2) = 4e-09
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = -3
Query: 794 LQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRST-GRVIYLVYANI 621
++ +++ W T + K+ +P II W L + R +KYGGK+S+ RV Y ++ +
Sbjct: 327 MRSQLLYWRSLQTNNEVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSIYRVQYGIFKDT 386
Query: 620 QRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGA 459
+I+ + ++ + W +I ++ + +KI V P G NTDG+
Sbjct: 387 MQIIKLEYSNIPW-QYSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGS 439
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = -1
Query: 427 GFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDSQLIQRIL 248
G LR+ G++ FA A TN A+++A + +++C+ I+++ DS+L+ + +
Sbjct: 450 GGILRDHQGSIIFAFASPFAFGTNNIAKLKAALYGLEWCEQHGYKDIVLEIDSELLSKWI 509
Query: 247 SEI*KPP*HISQWIEEIQELKEGMEVI-FTHVKRRE 143
S + P Q+++ I E+ + + H+ R E
Sbjct: 510 SNTIQIPWRCQQYVQHIHEITKKLHHFQCQHIYREE 545
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 49.7 bits (117), Expect(2) = 9e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Frame = -3
Query: 794 LQQRIIRW*QEPTTRRLKKIF-QAVPAIIIWEL*KRRNTIKYGGKRST-GRVIYLVYANI 621
L+ +++W + T + K+ +P I W L K R +KYG K S+ RV Y ++ NI
Sbjct: 1180 LRDLLLQWRNQQYTNEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNI 1239
Query: 620 QRIVLVRNPSLKQVPHKWEIMIQMLEGGEPTFKITKVI*KFPPDGWIVCNTDGASKRKPW 441
+++ + PS+ W +I ++E + +KI V P G NTDG++ +
Sbjct: 1240 MQVITIVFPSIPW-QTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSG 1298
Query: 440 K 438
K
Sbjct: 1299 K 1299
Score = 37.0 bits (84), Expect(2) = 9e-09
Identities = 24/102 (23%), Positives = 48/102 (47%)
Frame = -1
Query: 448 NPGRSFYGFCLRNSYGNLSFAQAEDIRITTNTEAEVRAIVEAVKYCKNELMDHIIIQTDS 269
N G+ G LR++ G + +A + TN AE++A + + +C+ I ++ DS
Sbjct: 1296 NSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKKIELEVDS 1355
Query: 268 QLIQRILSEI*KPP*HISQWIEEIQELKEGMEVIFTHVKRRE 143
+L+ ++ P + I++I ++ M+ H RE
Sbjct: 1356 KLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYRE 1397