BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00017410
         (1379 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...   640   0.0  
gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, put...   358   3e-96
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   353   7e-95
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...   340   1e-90
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi...   335   2e-89
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   335   3e-89
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   335   3e-89
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi...   327   1e-86
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]     325   3e-86
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...   325   3e-86
ref|XP_002326124.1| predicted protein [Populus trichocarpa]           321   4e-85
ref|XP_006381622.1| pentatricopeptide repeat-containing family p...   321   5e-85
gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus pe...   310   1e-81
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi...   295   3e-77
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ...   290   8e-76
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps...   288   3e-75
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]     288   5e-75
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                      283   9e-74
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...   283   9e-74

>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Solanum tuberosum]
            gi|565370447|ref|XP_006351832.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score =  647 bits (1669), Expect = 0.0
 Identities = 328/384 (85%), Positives = 344/384 (89%), Gaps = 7/384 (1%)
 Frame = -1

Query: 1133 MLLWVQRASNILLISRFHAHHASSKSF-----GPESIWFTKVVCLLCFQ--ESLDVFDSH 975
            M LWVQRASNILLI+RFH    SSKS      GPE++WFTKVVCLLCF   +SLDVF S 
Sbjct: 1    MPLWVQRASNILLIARFHGL-TSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSD 59

Query: 974  YFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGC 795
            YFR NLDPHIAF VI HINTNLNNPRLAFRF QCTRINLNLVH IG+FNLLL SL QMG 
Sbjct: 60   YFRQNLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGF 119

Query: 794  HDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTF 615
            HD A LVFK+MK DGYL+E+SILESVVLALANAGKF IAKEILI++ ELG EEG IVR F
Sbjct: 120  HDSAMLVFKFMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGRIVRPF 179

Query: 614  VHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFN 435
            VHNSLLSLLMKRSRVDEAV F K HILRS+RLFPDTC+FN VIRGLCRVGGVDKAFEFFN
Sbjct: 180  VHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFN 239

Query: 434  DMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKL 255
            DMGSFGCFPD VTYNTLINGLC+VGQV+RARGLL NLELQ+GLSPDVVTYTSVI+GYCKL
Sbjct: 240  DMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKL 299

Query: 254  GRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTF 75
            GRMDEAINLMDEM TYGISPNLVTFNILINGFGKIGDMFSAI MYGRMCAVGYPPDVVTF
Sbjct: 300  GRMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTF 359

Query: 74   TSLIDGYCRTGELDQGLKLWDEMN 3
            TSLIDGYCRTGELDQGLKLWDEMN
Sbjct: 360  TSLIDGYCRTGELDQGLKLWDEMN 383



 Score =  113 bits (282), Expect = 2e-22
 Identities = 77/308 (25%), Positives = 144/308 (46%), Gaps = 35/308 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN ++  LC++G  D A   F  M + G   ++    +++  L + G+   A+ +L   
Sbjct: 217  TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLL--- 273

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
            G L  ++G       + S+++   K  R+DEA+  + +  + +  + P+  +FNI+I G 
Sbjct: 274  GNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDE--MTTYGISPNLVTFNILINGF 331

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDR----------------- 348
             ++G +  A + +  M + G  PD+VT+ +LI+G C  G++D+                 
Sbjct: 332  GKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNL 391

Query: 347  ------------------ARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMD 222
                              AR LL  L+ ++ + P    Y  V+ G+CK G + +A  +  
Sbjct: 392  YTFSILISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAA 451

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM + G   + +TF ILI G    G M  A+ ++ +M ++G  PD +T + L     + G
Sbjct: 452  EMESRGCCHDKITFTILILGHCMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAG 511

Query: 41   ELDQGLKL 18
             + +  K+
Sbjct: 512  MVKEAYKV 519


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Solanum lycopersicum]
          Length = 550

 Score =  640 bits (1652), Expect = 0.0
 Identities = 324/384 (84%), Positives = 343/384 (89%), Gaps = 7/384 (1%)
 Frame = -1

Query: 1133 MLLWVQRASNILLISRFHAHHASSKSF-----GPESIWFTKVVCLLCFQ--ESLDVFDSH 975
            M LWVQRASNI LI+RFH    SSKS      GPE++WFTKVVCLLCF   +SLDVF S 
Sbjct: 1    MPLWVQRASNISLIARFHGL-TSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSD 59

Query: 974  YFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGC 795
            YFR NLDPHIAF VI HINTNLNNPRLAFRF QCTRINLNL+H IG+FNLLL SL QMG 
Sbjct: 60   YFRQNLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLIHCIGSFNLLLRSLSQMGF 119

Query: 794  HDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTF 615
            HD A LVFKYMK DGYL+E+SILESVVLALANAGKF IAKEILI++ ELG EEGSIVR F
Sbjct: 120  HDSAMLVFKYMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPF 179

Query: 614  VHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFN 435
            VHNSLLSLLMKRSRVDEAV F K HILRS+RLFPDTC+FN VIRGLCRVGGVDKAFEFFN
Sbjct: 180  VHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFN 239

Query: 434  DMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKL 255
            DMGSFGC PD VTYNTLINGLCAVGQV+RA+GLL NL+LQ+GLSPDVVTYTS+ISGYCKL
Sbjct: 240  DMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKL 299

Query: 254  GRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTF 75
             RMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAI MYG+MCAVGYPPDVVTF
Sbjct: 300  SRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTF 359

Query: 74   TSLIDGYCRTGELDQGLKLWDEMN 3
            TSLIDGYCRTGELDQGLKLWD+MN
Sbjct: 360  TSLIDGYCRTGELDQGLKLWDDMN 383



 Score =  117 bits (293), Expect = 1e-23
 Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 35/308 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN ++  LC++G  D A   F  M + G   ++    +++  L   G+   A+ +L   
Sbjct: 217  TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLL--- 273

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
            G L  ++G       + SL+S   K SR+DEA+  + + I     + P+  +FNI+I G 
Sbjct: 274  GNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMITYG--ISPNLVTFNILINGF 331

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDR----------------- 348
             ++G +  A + +  M + G  PD+VT+ +LI+G C  G++D+                 
Sbjct: 332  GKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNL 391

Query: 347  ------------------ARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMD 222
                              AR LL  L+ ++ + P    Y  V+ G+CK G + EA  +  
Sbjct: 392  YTFSVLISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAA 451

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM + G   + +TF ILI G    G M  A+ ++ +M ++G  PD +T + L     + G
Sbjct: 452  EMESKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAG 511

Query: 41   ELDQGLKL 18
             + +  K+
Sbjct: 512  MVKEAYKV 519



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
 Frame = -1

Query: 1049 PESIWFTKVVCLLC----FQESLDVFDSHYFRHNLDPH-IAFNVIDHINTNLNNPRLAFR 885
            P+ + +T ++   C      E++++ D     + + P+ + FN++ +    + +   A +
Sbjct: 284  PDVVTYTSLISGYCKLSRMDEAINLMDE-MITYGISPNLVTFNILINGFGKIGDMFSAIK 342

Query: 884  FF--QCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVL 711
             +   C    +     + TF  L+   C+ G  D    ++  M +            ++ 
Sbjct: 343  MYGKMCA---VGYPPDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLIS 399

Query: 710  ALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILR 531
            AL+   +   A+E+L    +L S +  + + FV+N +L    K   + EA     +  + 
Sbjct: 400  ALSKENRLNEARELL---RQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAE--ME 454

Query: 530  SKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVD 351
            SK    D  +F I+I G C  G + +A   F+ M S GC PD +T + L + L   G V 
Sbjct: 455  SKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVK 514

Query: 350  RAR--GLLSNLELQNGLSP 300
             A    L+ + +L   LSP
Sbjct: 515  EAYKVRLIPSKDLNPDLSP 533


>gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao]
          Length = 592

 Score =  358 bits (919), Expect = 3e-96
 Identities = 186/380 (48%), Positives = 256/380 (67%), Gaps = 10/380 (2%)
 Frame = -1

Query: 1115 RASNILLISRFHAH---------HASSKSFGPESIWFTKVVC-LLCFQESLDVFDSHYFR 966
            RA++ + I  FH           +   K+      WF KVVC L  + + LD     Y  
Sbjct: 56   RAASKVFIPHFHIQFHGGPHPQGNKEVKAIQKHEAWFVKVVCTLFVYSQPLDDSCLSYLS 115

Query: 965  HNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDL 786
             NL P I F V+      LNNP L  +F + +R+N N+ HS  T+NLL+ S C MG HD 
Sbjct: 116  KNLTPLIEFEVVKW----LNNPALGLKFLEFSRVNFNIAHSFWTYNLLMRSFCHMGLHDS 171

Query: 785  ATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHN 606
            A LVF YM+ DG+L +++IL  ++ +   AG+FG+AK++L    ++ S+E  ++  F  N
Sbjct: 172  AKLVFDYMRIDGHLPDTTILGFMISSFGRAGEFGMAKKLL---ADVQSDE-VVISIFALN 227

Query: 605  SLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMG 426
            +LL++++K+++++EAV   K+++      +PD  +FNI+IRGLCRVG VD+AFE FNDMG
Sbjct: 228  NLLNMMVKQNKLEEAVSLYKENL--GSNFYPDAWTFNILIRGLCRVGKVDQAFELFNDMG 285

Query: 425  SFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRM 246
            SFGCFPDIVTYNT+INGLC V +VDR   LL+ ++ ++  SPDVVTYTSVISGYCKLG+M
Sbjct: 286  SFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKM 345

Query: 245  DEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSL 66
            DEA  L  EMI+ G  P +VTFN+LI+GFGK+GDM SA +MY +M + G   DVVTFTSL
Sbjct: 346  DEASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVTFTSL 405

Query: 65   IDGYCRTGELDQGLKLWDEM 6
            IDGYCR G+++Q L+LW+ M
Sbjct: 406  IDGYCRIGDVNQSLQLWNTM 425



 Score =  123 bits (309), Expect = 2e-25
 Identities = 87/300 (29%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC++G  D A  +F  M + G   +     +++  L    +     ++L   
Sbjct: 260  TFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLL--- 316

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             ++ S +        + S++S   K  ++DEA      H + S    P   +FN++I G 
Sbjct: 317  NQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASALF--HEMISSGTVPTVVTFNVLIDGF 374

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDR----------------- 348
             +VG +  A   +  M SFGC  D+VT+ +LI+G C +G V++                 
Sbjct: 375  GKVGDMVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRDLSPNV 434

Query: 347  ------------------ARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMD 222
                              ARG L  L+ +N + P    +  VI G+CK G +DEA  ++ 
Sbjct: 435  YTFAITINALCKENRLHEARGFLRELQCRN-IVPKPFIFNPVIDGFCKAGNLDEANLIVA 493

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM      P+ VTF ILI G    G MF AI+++ +M +VG  PD VT  SLI    + G
Sbjct: 494  EMEEKQCHPDKVTFTILIIGHCMKGRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAG 553


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Vitis vinifera]
          Length = 641

 Score =  353 bits (907), Expect = 7e-95
 Identities = 191/387 (49%), Positives = 252/387 (65%), Gaps = 10/387 (2%)
 Frame = -1

Query: 1133 MLLWVQRASNI----LLISRFHAHHASSKSFGPESI-----WFTKVVCLLCFQ-ESLDVF 984
            +LL++ R S +    + I++FH H        PE I     W  KV+C LC +  SLD  
Sbjct: 35   LLLFITRPSRVRASKIAIAQFHEHAVGISRNRPEVIQNPENWIVKVICTLCVRTHSLDAC 94

Query: 983  DSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQ 804
               YF   L P IAF V+      LNNP LA +FFQ +R+NLNL HS  T++ LL SL +
Sbjct: 95   -LDYFSKTLTPSIAFEVV----RGLNNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSE 149

Query: 803  MGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIV 624
            MG H+ A  V+  M  DG+  ++S+L  +V +  +AGKF IA+  +         +G   
Sbjct: 150  MGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWV---------DGVEF 200

Query: 623  RTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFE 444
               V+N LL+ L++ ++VDEAV F ++ +        D+CSFNI+IRGLCR+G VDKAFE
Sbjct: 201  SLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DSCSFNILIRGLCRIGKVDKAFE 258

Query: 443  FFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGY 264
             FN+M  FGC PD++TYNTLING C V +VDR   LL  L  +N LSPDVVTYTS+ISGY
Sbjct: 259  LFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGY 318

Query: 263  CKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDV 84
            CKLG+M++A  L + MI+ GI PN  TFNILINGFGK+GDM SA NMY  M  +G PPD+
Sbjct: 319  CKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDI 378

Query: 83   VTFTSLIDGYCRTGELDQGLKLWDEMN 3
            +TFTSLIDG+CRTG++++ LKLW E+N
Sbjct: 379  ITFTSLIDGHCRTGKVERSLKLWHELN 405



 Score =  109 bits (273), Expect = 2e-21
 Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            +FN+L+  LC++G  D A  +F  M+  G   +     +++       +     ++L   
Sbjct: 239  SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLL--- 295

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             EL S+         + S++S   K  ++++A     + I  S  + P+  +FNI+I G 
Sbjct: 296  KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMI--SSGIKPNAFTFNILINGF 353

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPD 297
             +VG +  A   + +M   GC PDI+T+ +LI+G C  G+V+R+  L   L  +N LSP+
Sbjct: 354  GKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARN-LSPN 412

Query: 296  VVT-----------------------------------YTSVISGYCKLGRMDEAINLMD 222
              T                                   Y  VI G+CK G +DEA  ++ 
Sbjct: 413  EYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILA 472

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM      P+ +T+ ILI G    G +  AI+++ RM   G  PD +T TSLI    + G
Sbjct: 473  EMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAG 532

Query: 41   ELDQGLKL 18
              ++  ++
Sbjct: 533  MPNEAYRI 540


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
            gi|557556032|gb|ESR66046.1| hypothetical protein
            CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score =  340 bits (871), Expect = 1e-90
 Identities = 190/384 (49%), Positives = 253/384 (65%), Gaps = 14/384 (3%)
 Frame = -1

Query: 1115 RASNILLISRFHA-HHASSKSFGPESI--------WFTKVVCLLCFQES-LDVFDSHYFR 966
            RAS I  I+ FH   +  S+ F  + +        WF KVVC L  + S L    + Y  
Sbjct: 59   RASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLC 118

Query: 965  HNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDL 786
              L P  +  VI      L+NP+L  +F + +R+NL+L HS  T+NL++ SLC+MG HD 
Sbjct: 119  EKLSPLNSLEVIKR----LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174

Query: 785  ATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEIL--INKGELGSEEGSIVRTFV 612
              +VF YM++DG+L  S ++E  V +   AGK   AK +L     GE+       + TF+
Sbjct: 175  VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV------TMSTFM 228

Query: 611  HNSLLSLLMKRSRVDEAVGFLKDHILRSKRLF--PDTCSFNIVIRGLCRVGGVDKAFEFF 438
            +NSLL+ L+K++  DEAV   K++     RL+  PDT +FNI+IRGLCR+G V KAFEFF
Sbjct: 229  YNSLLNALVKQNNADEAVYMFKEYF----RLYSQPDTWTFNILIRGLCRIGEVKKAFEFF 284

Query: 437  NDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCK 258
             DMGSFGC PDIVTYNTLI+GLC V +V R   LL  ++ ++   PDVVTYTSVISGYCK
Sbjct: 285  YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCK 344

Query: 257  LGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVT 78
            LG+MD+A ++ +EM + GI P+ VTFN+LI+GFGK+G+M SA  M  RM ++GY PDVVT
Sbjct: 345  LGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVT 404

Query: 77   FTSLIDGYCRTGELDQGLKLWDEM 6
            F+SLIDGYCR G+L+QGLKL DEM
Sbjct: 405  FSSLIDGYCRNGQLNQGLKLCDEM 428



 Score =  105 bits (263), Expect = 3e-20
 Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 2/321 (0%)
 Frame = -1

Query: 974  YFRHNLDPHI-AFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMG 798
            YFR    P    FN++      +   + AF FF     +      I T+N L+  LC++ 
Sbjct: 252  YFRLYSQPDTWTFNILIRGLCRIGEVKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVN 310

Query: 797  CHDLATLVFKYMKTDG-YLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVR 621
                   + K +K    +L +     SV+      GK   A  I       G +  ++  
Sbjct: 311  EVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPSAV-- 368

Query: 620  TFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEF 441
            TF  N L+    K   +  A  ++++ +L S    PD  +F+ +I G CR G +++  + 
Sbjct: 369  TF--NVLIDGFGKVGNMVSAE-YMRERML-SLGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424

Query: 440  FNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYC 261
             ++M      P++ T+  LIN LC   +++ AR  L  L+  N L P    Y  VI G+C
Sbjct: 425  CDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLKW-NDLVPKPFMYNPVIDGFC 483

Query: 260  KLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVV 81
            K G +DEA  ++ EM      P+ VTF ILI G    G M  AI+++ +M  +G  PD +
Sbjct: 484  KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543

Query: 80   TFTSLIDGYCRTGELDQGLKL 18
            T  SLI    + G  ++  ++
Sbjct: 544  TVNSLISCLLKGGMPNEAFRI 564



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 35/202 (17%)
 Frame = -1

Query: 503 SFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNL 324
           ++N+V+R LC +G  D     F+ M S G  P+       ++     G+ D A+GLLS  
Sbjct: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217

Query: 323 E-------------LQNGL---------------------SPDVVTYTSVISGYCKLGRM 246
                         L N L                      PD  T+  +I G C++G +
Sbjct: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIRGLCRIGEV 277

Query: 245 DEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVG-YPPDVVTFTS 69
            +A     +M ++G SP++VT+N LI+G  ++ ++     +   +     + PDVVT+TS
Sbjct: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTS 337

Query: 68  LIDGYCRTGELDQGLKLWDEMN 3
           +I GYC+ G++D+   +++EMN
Sbjct: 338 VISGYCKLGKMDKATSIYNEMN 359


>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Citrus sinensis]
            gi|568841566|ref|XP_006474729.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Citrus sinensis]
          Length = 595

 Score =  335 bits (860), Expect = 2e-89
 Identities = 189/384 (49%), Positives = 251/384 (65%), Gaps = 14/384 (3%)
 Frame = -1

Query: 1115 RASNILLISRFHA-HHASSKSFGPESI--------WFTKVVCLLCFQES-LDVFDSHYFR 966
            RAS I  I+ FH   +  S+ F  + +        WF KVVC L  + S L    + Y  
Sbjct: 59   RASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLC 118

Query: 965  HNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDL 786
              L P  +  VI      L+NP+L  +F + +R+NL+L HS  T+NL++ SLC+MG HD 
Sbjct: 119  EKLSPLNSLEVIKR----LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174

Query: 785  ATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEIL--INKGELGSEEGSIVRTFV 612
              +VF YM++DG+L  S ++E  V +   AGK   AK +L     GE+       + TF+
Sbjct: 175  VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV------TMSTFM 228

Query: 611  HNSLLSLLMKRSRVDEAVGFLKDHILRSKRLF--PDTCSFNIVIRGLCRVGGVDKAFEFF 438
            +NSLL+ L+K++  DEAV   K++     RL+  PDT +FNI+I+GL R+G V KAFEFF
Sbjct: 229  YNSLLNALVKQNNADEAVYMFKEYF----RLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284

Query: 437  NDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCK 258
             DMGSFGC PDIVTYNTLI+GLC V +V R   LL  ++ ++  SPDVVTYTSVISGYCK
Sbjct: 285  YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344

Query: 257  LGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVT 78
            LG+MD+A  + +EM + GI P+ VTFN+LI+GFGK+G+M SA  M  RM + GY PDVVT
Sbjct: 345  LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404

Query: 77   FTSLIDGYCRTGELDQGLKLWDEM 6
            F+SLIDGYCR G+L+QGLKL DEM
Sbjct: 405  FSSLIDGYCRNGQLNQGLKLCDEM 428



 Score =  105 bits (261), Expect = 6e-20
 Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 35/308 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  L ++G    A   F  M + G   +     +++  L    +     E+L  +
Sbjct: 263  TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL-KE 321

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             +  SE    V T+   S++S   K  ++D+A G   +  + S  + P   +FN++I G 
Sbjct: 322  VKFKSEFSPDVVTYT--SVISGYCKLGKMDKATGIYNE--MNSCGIKPSAVTFNVLIDGF 377

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPD 297
             +VG +  A      M SFG  PD+VT+++LI+G C  GQ+++   L   ++ +N LSP+
Sbjct: 378  GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPN 436

Query: 296  VVTYT-----------------------------------SVISGYCKLGRMDEAINLMD 222
            V T+T                                    VI G+CK G +DEA  ++ 
Sbjct: 437  VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM      P+ VTF ILI G    G M  AI+++ +M  +G  PD +T  SLI    + G
Sbjct: 497  EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLTIGCAPDDITVNSLISCLLKGG 556

Query: 41   ELDQGLKL 18
              ++  ++
Sbjct: 557  MPNEAFRI 564



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 35/202 (17%)
 Frame = -1

Query: 503 SFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNL 324
           ++N+V+R LC +G  D     F+ M S G  P+       ++     G+ D A+GLLS  
Sbjct: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217

Query: 323 E-------------LQNGL---------------------SPDVVTYTSVISGYCKLGRM 246
                         L N L                      PD  T+  +I G  ++G +
Sbjct: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277

Query: 245 DEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVG-YPPDVVTFTS 69
            +A     +M ++G SP++VT+N LI+G  ++ ++     +   +     + PDVVT+TS
Sbjct: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337

Query: 68  LIDGYCRTGELDQGLKLWDEMN 3
           +I GYC+ G++D+   +++EMN
Sbjct: 338 VISGYCKLGKMDKATGIYNEMN 359


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  335 bits (859), Expect = 3e-89
 Identities = 175/344 (50%), Positives = 234/344 (68%)
 Frame = -1

Query: 1037 WFTKVVCLLCFQESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINL 858
            W  KVVC L F+         Y   NL+P IAF VI   +    +P L  +FF+ +R +L
Sbjct: 48   WLVKVVCTLFFRSHSLNACFGYLSRNLNPSIAFEVIKRFS----DPLLGLKFFEFSRTHL 103

Query: 857  NLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIA 678
            ++ H+  T++LL+ +LC++G +D A +VF  M++DG L +SSILE +V + A  GK   A
Sbjct: 104  SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 677  KEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSF 498
            K  L      G +    V  FV+N+LL++L+K++ VDEAV   ++H+       PD  SF
Sbjct: 164  KNFLNEVHCYGIK----VSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSF 217

Query: 497  NIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLEL 318
            NI+IRGLCR+G +DKAFEFF +MG+FGCFPDIV+YNTLING C V ++ +   LL    L
Sbjct: 218  NILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDML 277

Query: 317  QNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMF 138
              G+SPDV+TYTS+ISGYCKLG M  A  L DEM++ GI PN  TFN+LI+GFGK+G+M 
Sbjct: 278  IKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMR 337

Query: 137  SAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEM 6
            SA+ MY +M  +G  PDVVTFTSLIDGYCR GE++QGLKLW+EM
Sbjct: 338  SAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEM 381



 Score =  103 bits (257), Expect = 2e-19
 Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 9/319 (2%)
 Frame = -1

Query: 971  FRHNLDPHI-----AFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLC 807
            FR +L+P+      +FN++      +     AF FFQ    N      I ++N L+   C
Sbjct: 202  FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQ-NMGNFGCFPDIVSYNTLINGFC 260

Query: 806  QMG----CHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSE 639
            ++      HDL     + M   G   +     S++      G    A E+       G +
Sbjct: 261  RVNEISKGHDLLK---EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 317

Query: 638  EGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGV 459
                   F  N L+    K   +  A+   +  +L      PD  +F  +I G CR G V
Sbjct: 318  PND----FTFNVLIDGFGKVGNMRSAMVMYEKMLLLG--CLPDVVTFTSLIDGYCREGEV 371

Query: 458  DKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTS 279
            ++  + + +M      P++ TY  LIN LC   ++  AR  L +L+  + + P    Y  
Sbjct: 372  NQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLK-SSEVVPKPFIYNP 430

Query: 278  VISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVG 99
            VI G+CK G++DEA  ++ EM      P+ +TF ILI G    G M  AI+ + +M  + 
Sbjct: 431  VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490

Query: 98   YPPDVVTFTSLIDGYCRTG 42
              PD +T  SLI    + G
Sbjct: 491  CVPDEITINSLISCLLKAG 509



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
 Frame = -1

Query: 1061 KSFGPESIWFTKVVCLLC----FQESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRL 894
            K   P+ I +T ++   C     + + ++FD             FNV+      + N R 
Sbjct: 279  KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 893  AFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVV 714
            A   ++   + L  +  + TF  L+   C+ G  +    +++ MK             ++
Sbjct: 339  AMVMYE-KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397

Query: 713  LALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHIL 534
             AL    +   A+  L +   L S E  + + F++N ++    K  +VDEA   + +  +
Sbjct: 398  NALCKENRIREARNFLRH---LKSSE-VVPKPFIYNPVIDGFCKAGKVDEANFIVAE--M 451

Query: 533  RSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQV 354
            + K+  PD  +F I+I G C  G + +A   F  M    C PD +T N+LI+ L   G  
Sbjct: 452  QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511

Query: 353  DRA 345
            + A
Sbjct: 512  NEA 514


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  335 bits (859), Expect = 3e-89
 Identities = 175/344 (50%), Positives = 234/344 (68%)
 Frame = -1

Query: 1037 WFTKVVCLLCFQESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINL 858
            W  KVVC L F+         Y   NL+P IAF VI   +    +P L  +FF+ +R +L
Sbjct: 48   WLVKVVCTLFFRSHSLNACFGYLSRNLNPSIAFEVIKRFS----DPLLGLKFFEFSRTHL 103

Query: 857  NLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIA 678
            ++ H+  T++LL+ +LC++G +D A +VF  M++DG L +SSILE +V + A  GK   A
Sbjct: 104  SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 677  KEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSF 498
            K  L      G +    V  FV+N+LL++L+K++ VDEAV   ++H+       PD  SF
Sbjct: 164  KNFLNEVHCYGIK----VSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSF 217

Query: 497  NIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLEL 318
            NI+IRGLCR+G +DKAFEFF +MG+FGCFPDIV+YNTLING C V ++ +   LL    L
Sbjct: 218  NILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDML 277

Query: 317  QNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMF 138
              G+SPDV+TYTS+ISGYCKLG M  A  L DEM++ GI PN  TFN+LI+GFGK+G+M 
Sbjct: 278  IKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMR 337

Query: 137  SAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEM 6
            SA+ MY +M  +G  PDVVTFTSLIDGYCR GE++QGLKLW+EM
Sbjct: 338  SAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEM 381



 Score =  103 bits (257), Expect = 2e-19
 Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 9/319 (2%)
 Frame = -1

Query: 971  FRHNLDPHI-----AFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLC 807
            FR +L+P+      +FN++      +     AF FFQ    N      I ++N L+   C
Sbjct: 202  FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQ-NMGNFGCFPDIVSYNTLINGFC 260

Query: 806  QMG----CHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSE 639
            ++      HDL     + M   G   +     S++      G    A E+       G +
Sbjct: 261  RVNEISKGHDLLK---EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 317

Query: 638  EGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGV 459
                   F  N L+    K   +  A+   +  +L      PD  +F  +I G CR G V
Sbjct: 318  PND----FTFNVLIDGFGKVGNMRSAMVMYEKMLLLG--CLPDVVTFTSLIDGYCREGEV 371

Query: 458  DKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTS 279
            ++  + + +M      P++ TY  LIN LC   ++  AR  L +L+  + + P    Y  
Sbjct: 372  NQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLK-SSEVVPKPFIYNP 430

Query: 278  VISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVG 99
            VI G+CK G++DEA  ++ EM      P+ +TF ILI G    G M  AI+ + +M  + 
Sbjct: 431  VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490

Query: 98   YPPDVVTFTSLIDGYCRTG 42
              PD +T  SLI    + G
Sbjct: 491  CVPDEITINSLISCLLKAG 509



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
 Frame = -1

Query: 1061 KSFGPESIWFTKVVCLLC----FQESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRL 894
            K   P+ I +T ++   C     + + ++FD             FNV+      + N R 
Sbjct: 279  KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 893  AFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVV 714
            A   ++   + L  +  + TF  L+   C+ G  +    +++ MK             ++
Sbjct: 339  AMVMYE-KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397

Query: 713  LALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHIL 534
             AL    +   A+  L +   L S E  + + F++N ++    K  +VDEA   + +  +
Sbjct: 398  NALCKENRIREARNFLRH---LKSSE-VVPKPFIYNPVIDGFCKAGKVDEANFIVAE--M 451

Query: 533  RSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQV 354
            + K+  PD  +F I+I G C  G + +A   F  M    C PD +T N+LI+ L   G  
Sbjct: 452  QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511

Query: 353  DRA 345
            + A
Sbjct: 512  NEA 514


>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Fragaria vesca subsp. vesca]
          Length = 583

 Score =  327 bits (837), Expect = 1e-86
 Identities = 177/352 (50%), Positives = 237/352 (67%), Gaps = 3/352 (0%)
 Frame = -1

Query: 1049 PESIWFTKVVCLLCFQE-SLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQC 873
            PE+ WF KVV  L  +  SLD +   Y   NL P +AF VI      LNNP+L  RFF+ 
Sbjct: 81   PEA-WFVKVVYTLFLRSHSLDSYVG-YLSKNLTPSLAFEVIKR----LNNPKLGLRFFEL 134

Query: 872  TRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAG 693
            ++ +LN+ H + T++ LL SLCQMG  D A LVF YM+TDG     S+LE +V + A  G
Sbjct: 135  SKFSLNVNHGVWTYHYLLRSLCQMGLQDSAKLVFDYMRTDGLSPNESVLEFLVSSCAQMG 194

Query: 692  KFGIAKEIL--INKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRL 519
            +  +A++IL  ++   +G      + +FV+N+L ++L+K +RVDEAV   + ++      
Sbjct: 195  RSDLAEKILDEVHCSVVG------LSSFVYNNLFNVLVKLNRVDEAVCLFRKYV--GSYC 246

Query: 518  FPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARG 339
             PD+ +FNI+IRGLCR G VDK  EFF+DM SFGC P++VTYNTLI+GLC   +VDR   
Sbjct: 247  CPDSWTFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCD 306

Query: 338  LLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGF 159
            LL  ++ ++ LSPDV+T+TSVISGYCKLGRM+EA  + DEMI  G+ P  VTFN LI+G+
Sbjct: 307  LLREVQFRSELSPDVITFTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGY 366

Query: 158  GKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEMN 3
            GK GDM SA ++Y  M   G+  DV+TFTSLIDGYCR G L+ GL+LW EMN
Sbjct: 367  GKAGDMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHGLQLWHEMN 418



 Score =  100 bits (249), Expect = 1e-18
 Identities = 84/298 (28%), Positives = 128/298 (42%), Gaps = 33/298 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC+ G  D     F  M++ G         +++  L  A +     ++L  +
Sbjct: 252  TFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLL-RE 310

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHI-------------------- 537
             +  SE    V TF   S++S   K  R++EA     + I                    
Sbjct: 311  VQFRSELSPDVITFT--SVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGYGK 368

Query: 536  ---------LRSKRLFPDTCS----FNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVT 396
                     L    LF   C+    F  +I G CR G ++   + +++M +    P   T
Sbjct: 369  AGDMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVSPSAYT 428

Query: 395  YNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEM 216
            ++ LIN LC   ++  AR LL  L+  N + P    Y  VI G CK G +DEA  ++ EM
Sbjct: 429  FSVLINALCKGNRLCEARDLLRELKGSN-VVPKSFLYNPVIDGLCKAGNIDEANLIVAEM 487

Query: 215  ITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
                 +P+ VTF ILI G    G M  AI  + +M ++G  PD +T  SLI    + G
Sbjct: 488  EEKKCTPDRVTFTILILGNSMKGRMSEAIGNFSKMLSIGCAPDKITIDSLISCLSKAG 545


>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
          Length = 570

 Score =  325 bits (833), Expect = 3e-86
 Identities = 177/365 (48%), Positives = 229/365 (62%), Gaps = 1/365 (0%)
 Frame = -1

Query: 1094 ISRFHAHHASSKSFGPESIWFTKVVCLLCFQ-ESLDVFDSHYFRHNLDPHIAFNVIDHIN 918
            +S  H HH   +       WF KVV  L  + +SL+ F   Y    L P I+F VI  +N
Sbjct: 56   VSLVHFHHKRKEVISYSEAWFVKVVSTLFVRSQSLNTFFG-YLSKKLTPSISFEVIKRLN 114

Query: 917  TNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVE 738
               NNP L  +FF+ +R NL++ HS  T+NLL+ SLCQMG HD A  VF  M+ DG+  +
Sbjct: 115  ---NNPNLGLKFFELSRANLSVNHSFSTYNLLIRSLCQMGFHDSAKFVFDCMRIDGHSPD 171

Query: 737  SSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAV 558
            +S +E +V   A  GK    +++L         E      FV++SL ++L+K ++V EAV
Sbjct: 172  NSTIEFLVCVFAKVGKLDSCEKLL---------EEIRASKFVYSSLFNVLVKNNKVYEAV 222

Query: 557  GFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLIN 378
               +  I       PDT +FNI+I GLC VG V  AFEFFNDMG F C PD+VTYNTLI+
Sbjct: 223  CLFRKQI--GSHFVPDTWTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLIS 280

Query: 377  GLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGIS 198
            GLC   +VDR   LL  ++L+   SP+V T+TSVI GYCKLGRM+EA  L DEM+  G  
Sbjct: 281  GLCRTNEVDRGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTR 340

Query: 197  PNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKL 18
            P  VTFN+LI+ F K+GDM SAI +Y +M   GY PDVVTFTSLIDGYCR G+L++GLKL
Sbjct: 341  PTTVTFNVLIDAFSKVGDMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKL 400

Query: 17   WDEMN 3
            W EM+
Sbjct: 401  WCEMS 405



 Score =  106 bits (265), Expect = 2e-20
 Identities = 82/288 (28%), Positives = 139/288 (48%)
 Frame = -1

Query: 869  RINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGK 690
            +I  + V    TFN+L+  LC +G    A   F  M       +     +++  L    +
Sbjct: 228  QIGSHFVPDTWTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNE 287

Query: 689  FGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPD 510
                 ++L  + +L  +    VRTF   S++    K  R++EA     + +    R  P 
Sbjct: 288  VDRGCDLL-REVQLRGDFSPNVRTFT--SVILGYCKLGRMEEASALFDEMMDSGTR--PT 342

Query: 509  TCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLS 330
            T +FN++I    +VG +  A   +  M   G  PD+VT+ +LI+G C VGQ++R   L  
Sbjct: 343  TVTFNVLIDAFSKVGDMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKLWC 402

Query: 329  NLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKI 150
             + ++N +SP+  TY+ VI   CK+ R+ EA +L+ ++    I P    +N +I+GF K 
Sbjct: 403  EMSVRN-VSPNGYTYSVVIHALCKVNRLHEARDLLRQLNCTNIVPKPFMYNPVIDGFCKA 461

Query: 149  GDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEM 6
            G++  A  +   M      PD +TFT LI G C  G +   + ++ +M
Sbjct: 462  GNVDEANMIVAEMEEKRCNPDKMTFTILILGNCMKGRMVDAIGVFYKM 509



 Score =  104 bits (260), Expect = 8e-20
 Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1001 ESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLL 822
            E++ +F      H +     FN++      +     AF FF            + T+N L
Sbjct: 220  EAVCLFRKQIGSHFVPDTWTFNILIGGLCGVGEVHSAFEFFNDMG-KFRCSPDVVTYNTL 278

Query: 821  LISLCQMGCHDLATLVFKYMKTDG-YLVESSILESVVLALANAGKFGIAKEILINKGELG 645
            +  LC+    D    + + ++  G +        SV+L     G+   A  +     + G
Sbjct: 279  ISGLCRTNEVDRGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSG 338

Query: 644  SEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVG 465
            +   ++  TF  N L+    K   +  A+   +  +    R  PD  +F  +I G CRVG
Sbjct: 339  TRPTTV--TF--NVLIDAFSKVGDMASAIALYEKMLFHGYR--PDVVTFTSLIDGYCRVG 392

Query: 464  GVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTY 285
             +++  + + +M      P+  TY+ +I+ LC V ++  AR LL  L   N + P    Y
Sbjct: 393  QLNRGLKLWCEMSVRNVSPNGYTYSVVIHALCKVNRLHEARDLLRQLNCTN-IVPKPFMY 451

Query: 284  TSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCA 105
              VI G+CK G +DEA  ++ EM     +P+ +TF ILI G    G M  AI ++ +M A
Sbjct: 452  NPVIDGFCKAGNVDEANMIVAEMEEKRCNPDKMTFTILILGNCMKGRMVDAIGVFYKMLA 511

Query: 104  VGYPPDVVTFTSLIDGYCRTG 42
            VG  PD +T   L+    + G
Sbjct: 512  VGCAPDKITVHCLMSCLLKAG 532


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score =  325 bits (833), Expect = 3e-86
 Identities = 170/349 (48%), Positives = 237/349 (67%), Gaps = 2/349 (0%)
 Frame = -1

Query: 1046 ESIWFTKVVCLLCFQESL-DVFDSHYFRHNL-DPHIAFNVIDHINTNLNNPRLAFRFFQC 873
            +  WF KV+ +L  +    D     Y    L DP +AF VI  +N   NNP++  +F + 
Sbjct: 26   QEAWFVKVIAILFVRSHCSDATSLGYLSEKLNDPLVAFEVIKRLN---NNPQVGLKFMEF 82

Query: 872  TRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAG 693
             R+N +L+H   T+ LL+ SLCQMG HDL  +V  YM++DG+L++S +L  +V + A AG
Sbjct: 83   CRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAG 142

Query: 692  KFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFP 513
            KF +AK+++I   E+  EE  I  +FV+N LL+ L+K  +V EA+   K+++       P
Sbjct: 143  KFDLAKKLII---EVQGEEARI-SSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSP--P 196

Query: 512  DTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLL 333
            +T +FNI+IRGLCRVG V+K FE FN M SFGC PD+VTYNTLI+GLC   ++DRA  LL
Sbjct: 197  NTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLL 256

Query: 332  SNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGK 153
              ++ +N  SPDV+TYTS+ISG+ KLG+++ A  L +EMI  GI P +VTFN+LI+GFGK
Sbjct: 257  KEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGK 316

Query: 152  IGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEM 6
            IG+M +A  M+ +M +    PDVVTFTSLIDGYCRTG++  GLK+WD M
Sbjct: 317  IGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVM 365



 Score =  119 bits (297), Expect = 4e-24
 Identities = 78/277 (28%), Positives = 143/277 (51%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC++G  +    +F  M++ G L +     +++  L  A +   A ++L   
Sbjct: 200  TFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLL--- 256

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             E+ S          + S++S   K  ++ EA   L + ++RS  + P   +FN++I G 
Sbjct: 257  KEVQSRNDCSPDVMTYTSIISGFRKLGKL-EAASVLFEEMIRSG-IEPTVVTFNVLIDGF 314

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPD 297
             ++G +  A      M S+ C PD+VT+ +LI+G C  G +     +   ++ +N +SP+
Sbjct: 315  GKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARN-VSPN 373

Query: 296  VVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYG 117
            + TY+ +I+  CK  R+ EA +L+ ++    + P    +N +I+GF K G++  A  +  
Sbjct: 374  IYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVT 433

Query: 116  RMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEM 6
             M      PD VTFT LI G+C  G + + L ++ +M
Sbjct: 434  EMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKM 470



 Score = 81.6 bits (200), Expect = 7e-13
 Identities = 60/241 (24%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
 Frame = -1

Query: 836 TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFG--IAKEILI 663
           T+  ++    ++G  + A+++F+ M   G  +E +++   VL +   GK G  +A E + 
Sbjct: 271 TYTSIISGFRKLGKLEAASVLFEEMIRSG--IEPTVVTFNVL-IDGFGKIGNMVAAEAMH 327

Query: 662 NKGELGSEEGSIVRTFVHNSLLSLLMKRSRV-DEAVGFLKDHILRSKRLFPDTCSFNIVI 486
            K    S    +V      +  SL+    R  D  +G     +++++ + P+  +++++I
Sbjct: 328 EKMASYSCIPDVV------TFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVII 381

Query: 485 RGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGL 306
             LC+   + +A +    +     FP    YN +I+G C  G VD A  +++ +E +   
Sbjct: 382 NALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEME-EKRC 440

Query: 305 SPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIN 126
            PD VT+T +I G+C  GRM EA+++  +M+  G +P+ +T + L+    K G    A +
Sbjct: 441 RPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFH 500

Query: 125 M 123
           +
Sbjct: 501 I 501


>ref|XP_002326124.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  321 bits (823), Expect = 4e-85
 Identities = 164/323 (50%), Positives = 224/323 (69%)
 Frame = -1

Query: 974 YFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGC 795
           Y    L P IAF VI   N    NP++ F+F + +R+NLN+ H   T+NLL+ SLCQMG 
Sbjct: 33  YPDRQLTPLIAFEVIKRFN----NPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGH 88

Query: 794 HDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTF 615
           HDL  +VF YM +DG+L +S +L  +V  +A A  F + K++L    E+  +E  I  +F
Sbjct: 89  HDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL---AEVQGKEVRI-NSF 144

Query: 614 VHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFN 435
           V+N+LLS+L+K+++V EA+   K++++      PDT +FNI+IRGLCRVGGVD+AFE F 
Sbjct: 145 VYNNLLSVLVKQNQVHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEVFK 202

Query: 434 DMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKL 255
           DM SFGC PD+VTYNTLINGLC   +V R   L   ++ ++  SPD+VTYTS+ISG+CK 
Sbjct: 203 DMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKS 262

Query: 254 GRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTF 75
           G+M EA NL +EM+  GI PN++TFN+LI+GFGKIG++  A  MY +M       DVVTF
Sbjct: 263 GKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTF 322

Query: 74  TSLIDGYCRTGELDQGLKLWDEM 6
           TSLIDGYCR G+++ GLK W+ M
Sbjct: 323 TSLIDGYCRAGQVNHGLKFWNVM 345



 Score =  117 bits (293), Expect = 1e-23
 Identities = 87/308 (28%), Positives = 142/308 (46%), Gaps = 35/308 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC++G  D A  VFK M++ G L +     +++  L  A +     E+    
Sbjct: 180  TFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELF--- 236

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             E+ S          + S++S   K  ++ EA    ++ ++RS  + P+  +FN++I G 
Sbjct: 237  KEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEE-MMRSG-IQPNVITFNVLIDGF 294

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPD 297
             ++G + +A   +  M  F C  D+VT+ +LI+G C  GQV+      + ++ +N +SP 
Sbjct: 295  GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRN-VSPT 353

Query: 296  VVTYT-----------------------------------SVISGYCKLGRMDEAINLMD 222
            V TY                                     VI G+CK G +DE   ++ 
Sbjct: 354  VYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILK 413

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM      P+ VTF ILI G    G MF AIN++ RM A    PD +T  SLI    + G
Sbjct: 414  EMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAG 473

Query: 41   ELDQGLKL 18
              ++  ++
Sbjct: 474  MPNEAYRI 481


>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550336330|gb|ERP59419.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 511

 Score =  321 bits (822), Expect = 5e-85
 Identities = 164/323 (50%), Positives = 223/323 (69%)
 Frame = -1

Query: 974 YFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGC 795
           Y    L P IAF VI   N    NP++ F+F + +R+NLN+ H   T+NLL+ SLCQMG 
Sbjct: 33  YPDRQLTPLIAFEVIKRFN----NPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGH 88

Query: 794 HDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTF 615
           HDL  +VF YM +DG+L +S +L  +V  +A A  F + K++L    E+  +E  I  +F
Sbjct: 89  HDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL---AEVQGKEVRI-NSF 144

Query: 614 VHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFN 435
           V+N+LLS+L+K+++V EA+   K+++       PDT +FNI+IRGLCRVGGVD+AFE F 
Sbjct: 145 VYNNLLSVLVKQNQVHEAIYLFKEYLAMQS---PDTWTFNILIRGLCRVGGVDRAFEVFK 201

Query: 434 DMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKL 255
           DM SFGC PD+VTYNTLINGLC   +V R   L   ++ ++  SPD+VTYTS+ISG+CK 
Sbjct: 202 DMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKS 261

Query: 254 GRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTF 75
           G+M EA NL +EM+  GI PN++TFN+LI+GFGKIG++  A  MY +M       DVVTF
Sbjct: 262 GKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTF 321

Query: 74  TSLIDGYCRTGELDQGLKLWDEM 6
           TSLIDGYCR G+++ GLK W+ M
Sbjct: 322 TSLIDGYCRAGQVNHGLKFWNVM 344



 Score =  117 bits (293), Expect = 1e-23
 Identities = 87/308 (28%), Positives = 142/308 (46%), Gaps = 35/308 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC++G  D A  VFK M++ G L +     +++  L  A +     E+    
Sbjct: 179  TFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELF--- 235

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             E+ S          + S++S   K  ++ EA    ++ ++RS  + P+  +FN++I G 
Sbjct: 236  KEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEE-MMRSG-IQPNVITFNVLIDGF 293

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPD 297
             ++G + +A   +  M  F C  D+VT+ +LI+G C  GQV+      + ++ +N +SP 
Sbjct: 294  GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRN-VSPT 352

Query: 296  VVTYT-----------------------------------SVISGYCKLGRMDEAINLMD 222
            V TY                                     VI G+CK G +DE   ++ 
Sbjct: 353  VYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILK 412

Query: 221  EMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            EM      P+ VTF ILI G    G MF AIN++ RM A    PD +T  SLI    + G
Sbjct: 413  EMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAG 472

Query: 41   ELDQGLKL 18
              ++  ++
Sbjct: 473  MPNEAYRI 480


>gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
          Length = 532

 Score =  310 bits (793), Expect = 1e-81
 Identities = 183/382 (47%), Positives = 231/382 (60%), Gaps = 8/382 (2%)
 Frame = -1

Query: 1124 WVQRASNILLISRFH--AHHASSKSF----GPESIWFTKVVCLLCFQESLDVFDSH--YF 969
            WV RAS I  IS FH  AH  +         PE+ WF KVVC L  +      DS+  Y 
Sbjct: 63   WV-RASKIA-ISHFHSLAHGGARPQIEVISNPEA-WFVKVVCTLFVRSH--ALDSYLGYL 117

Query: 968  RHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHD 789
              NL P IAF VI      LN+P+L  +FF+ +R++L++ HS+ T+N LL SLCQ+G  D
Sbjct: 118  SKNLTPSIAFEVI----RRLNHPKLGLKFFELSRLSLSVNHSVWTYNFLLRSLCQIGLQD 173

Query: 788  LATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVH 609
             A LVF YM++DG+  + SI E +V + A  GK   A+++L                   
Sbjct: 174  SAKLVFDYMRSDGHTPDDSIAELLVSSYAQMGKLNNAEKLL------------------- 214

Query: 608  NSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDM 429
                         DE              +  D+ +FNI+IRGLCR+G +DKAFEFF+DM
Sbjct: 215  -------------DE--------------VHCDSWTFNILIRGLCRIGEIDKAFEFFSDM 247

Query: 428  GSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGR 249
             SFGC+PDIVTYNTLI+GLC   +VDR   LL  ++ +  LSPDV+T+TSVISGYCKLG+
Sbjct: 248  ESFGCYPDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLGK 307

Query: 248  MDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTS 69
            M+EA  L DEM   G+ P  VTFN LI+GFGK G+M SA  MY +M   GY PDV+TFTS
Sbjct: 308  MEEASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISARAMYEKMLFHGYRPDVITFTS 367

Query: 68   LIDGYCRTGELDQGLKLWDEMN 3
            LIDGYCR G+L QGLKLW EMN
Sbjct: 368  LIDGYCRAGKLSQGLKLWQEMN 389



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
 Frame = -1

Query: 836 TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
           TFN L+    + G    A  +++ M   GY  +     S++     AGK     ++    
Sbjct: 329 TFNALIDGFGKSGNMISARAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLSQGLKLW--- 385

Query: 656 GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLK----DHI------LRSKRLFPDT 507
            E+ ++  S    +  + L++ L + +R+ EA GF K    D        +  KR  PD 
Sbjct: 386 QEMNAKNVS-PSAYTFSVLINALCRENRLQEAHGFCKAGNVDEANLIVAEMEEKRCSPDK 444

Query: 506 CSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGL--L 333
            +F I+I G C  G + +A   F  M + GC PD +T ++LI+ L   G  + A  +  +
Sbjct: 445 VTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVDSLISCLMKAGMPNEAHHIKKI 504

Query: 332 SNLELQNGLSP 300
           +  +L  G+SP
Sbjct: 505 ACEDLNLGMSP 515


>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Glycine max]
          Length = 544

 Score =  295 bits (755), Expect = 3e-77
 Identities = 161/350 (46%), Positives = 227/350 (64%), Gaps = 1/350 (0%)
 Frame = -1

Query: 1049 PESIWFTKVVCLLCF-QESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQC 873
            P+S WF K+V  L     SLD     YFR +L P     V+   N    NP L F+FF+ 
Sbjct: 43   PDS-WFVKIVSTLFLCSNSLDDRFLGYFREHLTPSHVLEVVKRFN----NPNLGFKFFRF 97

Query: 872  TRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAG 693
            TR  L++ HS  T+N+LL SLCQ G H+ A L++  M++DG L +S +L  +V + A A 
Sbjct: 98   TRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALAD 157

Query: 692  KFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFP 513
            +F ++KE+L      G +    V   V+N+ L++L+K +R+D+A+   ++ ++RS     
Sbjct: 158  RFDVSKELLAEAQCSGVQ----VDVIVYNNFLNILIKHNRLDDAICLFRE-LMRSHSCL- 211

Query: 512  DTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLL 333
            D  +FNI+IRGLC  G VD+AFE   DMGSFGC PDIVTYN L++GLC + QVDRAR LL
Sbjct: 212  DAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLL 271

Query: 332  SNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGK 153
              + L+   +P+VV+YT+VISGYC+L +MDEA +L  EM+  G  PN+ TF+ L++GF K
Sbjct: 272  EEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVK 331

Query: 152  IGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEMN 3
             GDM SA+ M+ ++   G  P+V+T TSLI+GYCR G ++ GL LW EMN
Sbjct: 332  AGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMN 381



 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
 Frame = -1

Query: 842  IGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLA-LANAGKFGIAKEIL 666
            I T+N+LL  LC++   D A  + + +        + +  + V++      K   A  + 
Sbjct: 248  IVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLF 307

Query: 665  INKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVI 486
                  G++       F  ++L+   +K   +  A+G  K  +       P+  +   +I
Sbjct: 308  YEMVRSGTKPN----VFTFSALVDGFVKAGDMASALGMHKKILFHG--CAPNVITLTSLI 361

Query: 485  RGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGL 306
             G CR G V+   + + +M +     ++ TY+ LI+ LC   ++  AR LL  L+ Q+ +
Sbjct: 362  NGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILK-QSDI 420

Query: 305  SPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIN 126
             P    Y  VI GYCK G +DEA  ++ EM      P+ +TF ILI G    G    AI 
Sbjct: 421  VPLAFVYNPVIDGYCKSGNIDEANAIVAEM-EEKCKPDKLTFTILIIGHCMKGRTPEAIG 479

Query: 125  MYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            ++ +M A G  PD +T  +L     ++G
Sbjct: 480  IFYKMLASGCTPDDITIRTLSSCLLKSG 507



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 54/271 (19%), Positives = 119/271 (43%), Gaps = 4/271 (1%)
 Frame = -1

Query: 947  IAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFK 768
            + +N++ H    ++    A    +   +      ++ ++  ++   C++   D A+ +F 
Sbjct: 249  VTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFY 308

Query: 767  YMKTDG----YLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSL 600
             M   G        S++++  V A   A   G+ K+IL +        G         SL
Sbjct: 309  EMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFH--------GCAPNVITLTSL 360

Query: 599  LSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSF 420
            ++   +   V+  +   ++  + ++ +  +  +++++I  LC+   + +A      +   
Sbjct: 361  INGYCRAGWVNHGLDLWRE--MNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQS 418

Query: 419  GCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDE 240
               P    YN +I+G C  G +D A  +++  E++    PD +T+T +I G+C  GR  E
Sbjct: 419  DIVPLAFVYNPVIDGYCKSGNIDEANAIVA--EMEEKCKPDKLTFTILIIGHCMKGRTPE 476

Query: 239  AINLMDEMITYGISPNLVTFNILINGFGKIG 147
            AI +  +M+  G +P+ +T   L +   K G
Sbjct: 477  AIGIFYKMLASGCTPDDITIRTLSSCLLKSG 507


>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331650|gb|EFH62069.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 536

 Score =  290 bits (743), Expect = 8e-76
 Identities = 165/380 (43%), Positives = 229/380 (60%), Gaps = 16/380 (4%)
 Frame = -1

Query: 1094 ISRFHAH------------HASSKSFGPESIWFTKVVCLLCFQESLDVFDSH----YFRH 963
            I+ FH H            +   K   PE+ W  K+V  L       V DS     Y   
Sbjct: 10   IAHFHTHSHGGAQARPIQNNTREKIHCPEA-WLVKIVSTLFVYR---VPDSDLCFCYLSK 65

Query: 962  NLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLA 783
            NL+P I+F V+  ++   NNP + FRF++ +R  LN+ HS  T+NLL  SLC+ G HDLA
Sbjct: 66   NLNPFISFEVVKKLD---NNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLA 122

Query: 782  TLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNS 603
              +F+ MK+DG    S +L  +V + A  GK   A  +L+   E+   EG  +   V NS
Sbjct: 123  GQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEV---EGCCM---VVNS 176

Query: 602  LLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGS 423
            LL+ L+K  RV++A+   ++H+        DT +FNI+IRGLC VG  +KA E    M  
Sbjct: 177  LLNTLVKLDRVEDAMKLFEEHLRFQS--CNDTKTFNILIRGLCGVGKAEKAVELLGGMSG 234

Query: 422  FGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMD 243
            FGC PDIVTYNTLI G C   ++ +A  +  +++  +G SPDVVTYTS+ISGYCK G+M 
Sbjct: 235  FGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQ 294

Query: 242  EAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLI 63
            EA  L+D+M+  GI P  VTFN+L++G+ K G+M +A  + G+M + G  PDVVTFTSLI
Sbjct: 295  EASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLI 354

Query: 62   DGYCRTGELDQGLKLWDEMN 3
            DGYCR G+++QG +LW+EMN
Sbjct: 355  DGYCRVGQVNQGFRLWEEMN 374



 Score =  126 bits (317), Expect = 2e-26
 Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 34/299 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC +G  + A  +   M   G L +     +++     + +   A E+    
Sbjct: 208  TFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF--- 264

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             ++ S  G       + S++S   K  ++ EA   L D +LR   ++P   +FN+++ G 
Sbjct: 265  DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEA-SVLLDDMLRLG-IYPTNVTFNVLVDGY 322

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDR---------ARGLLSNL 324
             + G +  A E    M SFGCFPD+VT+ +LI+G C VGQV++         ARG+  N 
Sbjct: 323  AKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNA 382

Query: 323  --------------------ELQNGLS-----PDVVTYTSVISGYCKLGRMDEAINLMDE 219
                                EL   L+     P    Y  VI G+CK G+++EAI +++E
Sbjct: 383  FTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEE 442

Query: 218  MITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTG 42
            M      P+ +TF ILI G    G MF A++++ +M A+G  PD +T +SL+    + G
Sbjct: 443  MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
 Frame = -1

Query: 1067 SSKSFGPESIWFTKVVCLLC----FQESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNP 900
            SS    P+ + +T ++   C     QE+  + D          ++ FNV+          
Sbjct: 269  SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328

Query: 899  RLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILES 720
              A    +   I+      + TF  L+   C++G  +    +++ M   G    +     
Sbjct: 329  HTAEEI-RGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSI 387

Query: 719  VVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDH 540
            ++ AL    +   A+E+L   G+L S++  I + F++N ++    K  +V+EA+  +++ 
Sbjct: 388  LINALCKENRLLKARELL---GQLASKD-IIPQPFMYNPVIDGFCKAGKVNEAIVIVEE- 442

Query: 539  ILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVG 360
             +  K+  PD  +F I+I G C  G + +A   F+ M + GC PD +T ++L++ L   G
Sbjct: 443  -MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501

Query: 359  QVDRA 345
                A
Sbjct: 502  MAKEA 506


>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
            gi|565479514|ref|XP_006297397.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
            gi|482566105|gb|EOA30294.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
            gi|482566106|gb|EOA30295.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
          Length = 535

 Score =  288 bits (738), Expect = 3e-75
 Identities = 162/379 (42%), Positives = 225/379 (59%), Gaps = 15/379 (3%)
 Frame = -1

Query: 1094 ISRFHAHHASSKSFGP-----------ESIWFTKVVCLLCFQESLDVFDSH----YFRHN 960
            I+ FH H        P              W  K+V  L       V DS     Y   N
Sbjct: 10   IAHFHTHSHGGAQARPLHSNKREVMHCPEAWLIKIVSTLFVYR---VPDSDLCFCYLSKN 66

Query: 959  LDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLAT 780
            L+P IAF V+  ++ N  +P L FRF++ +R  LN+ HS  T+N+L  SLC+ G HDLA 
Sbjct: 67   LNPFIAFEVVKKLDNN--HPHLGFRFWEFSRFKLNIRHSFWTYNVLTRSLCKAGMHDLAG 124

Query: 779  LVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSL 600
             +F+ M++DG    S +L  +V + A  GK   A  +L+   E+           V NSL
Sbjct: 125  QMFECMRSDGVSPNSRLLGFLVSSFAEKGKLQFATALLLQSYEVER------CCMVVNSL 178

Query: 599  LSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSF 420
            L+ L+K  RVD+A+     H+    +   DT +FNI+IRGLC VG  +KA E   +M  F
Sbjct: 179  LNTLVKLDRVDDAMKLFDKHL--RFQCCNDTKTFNILIRGLCSVGKGEKALELLGEMSGF 236

Query: 419  GCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDE 240
            GC PDIVTYNTLI G C   ++ +A  +L++++  +G SPDVVTYTS+ISGYCK G+M E
Sbjct: 237  GCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSPDVVTYTSMISGYCKAGKMQE 296

Query: 239  AINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLID 60
            A  L+D+M+  GI P  +TFN+L++G+ K G+M SA ++ G+M + G  PDVVTFTSLID
Sbjct: 297  AYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIRGKMISFGCFPDVVTFTSLID 356

Query: 59   GYCRTGELDQGLKLWDEMN 3
            GYCR G+++QG +LW+EMN
Sbjct: 357  GYCRAGQVNQGFRLWEEMN 375



 Score =  128 bits (321), Expect = 6e-27
 Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 34/307 (11%)
 Frame = -1

Query: 836  TFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINK 657
            TFN+L+  LC +G  + A  +   M   G   +     +++     + +   A E+L   
Sbjct: 209  TFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEML--- 265

Query: 656  GELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGL 477
             ++ S  G       + S++S   K  ++ EA   L D +     ++P T +FN+++ G 
Sbjct: 266  NDVKSSSGCSPDVVTYTSMISGYCKAGKMQEAYLLLDDML--GLGIYPTTITFNVLVDGY 323

Query: 476  CRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDR---------ARGLLSN- 327
             + G +  A +    M SFGCFPD+VT+ +LI+G C  GQV++         A+G+L N 
Sbjct: 324  AKAGEMTSAEDIRGKMISFGCFPDVVTFTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNE 383

Query: 326  ---------LELQNGL-----------SPDVVT----YTSVISGYCKLGRMDEAINLMDE 219
                     L  +N L           S D++T    Y  VI G+CK G+++EA  +++E
Sbjct: 384  FTYSILINALCKENSLLKARELLGQLASKDIITKPFMYNPVIDGFCKAGKVNEANVIVEE 443

Query: 218  MITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGE 39
            M      P+ +TF ILI G    G MF A++++ +M A+G  PD +T  SL+    + G 
Sbjct: 444  MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVNSLLSCLLKAGM 503

Query: 38   LDQGLKL 18
             ++   L
Sbjct: 504  AEEAYHL 510


>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
          Length = 732

 Score =  288 bits (736), Expect = 5e-75
 Identities = 167/383 (43%), Positives = 230/383 (60%), Gaps = 9/383 (2%)
 Frame = -1

Query: 1127 LWVQRASNILLISRFHAHHASSKS--------FGPESIWFTKVVCLLCFQE-SLDVFDSH 975
            LWV R S I +       H  S++              WF KVVC L  +  SLD F + 
Sbjct: 59   LWV-RVSRIAIAHFNSLAHGGSRARPFHDREILSNSEAWFVKVVCTLFVRSHSLDCFSN- 116

Query: 974  YFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGC 795
                NL+P  AF VI      LN+P L  +FF  +R+NLN+ H++ ++N L+ SLCQMG 
Sbjct: 117  ----NLNPSTAFEVI----RRLNSPTLGLKFFALSRVNLNVNHTLSSYNYLMRSLCQMGL 168

Query: 794  HDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTF 615
            HD A  VF   K+DG+L +SSI+E ++ + A  G+  + +++L    EL   +G IV + 
Sbjct: 169  HDSAKFVFDCFKSDGHLPDSSIVEFLLCSHAQVGRLDLVEKLL---DEL-RRDGIIVSSI 224

Query: 614  VHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFN 435
            V+N+LL++L+K+++V EAV   + H+  + R  P T +FNI+I+GLC +  V  AFEF N
Sbjct: 225  VYNNLLNVLVKQNKVCEAVCLFRKHM--NSRFRPSTWTFNILIQGLCGIRDVYTAFEFLN 282

Query: 434  DMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKL 255
            +MG  GC PDIVTYNTLI+GLC    VDR   LL  L+ ++ LSPD VT+TSVISGYCKL
Sbjct: 283  EMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKL 342

Query: 254  GRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTF 75
            GRM EA +L  EMI  GI P   TFN LI+G  K GDM SA+ ++ R   + + PD  TF
Sbjct: 343  GRMSEASSLFAEMINSGIKPAAATFNALIDGHAKAGDMASAVCLFRRNMTLHFQPDTWTF 402

Query: 74   TSLIDGYCRTGELDQGLKLWDEM 6
              LI G C  G++    + + +M
Sbjct: 403  NILIRGLCGVGKVHTAFEFFKDM 425



 Score =  240 bits (613), Expect = 9e-61
 Identities = 140/314 (44%), Positives = 184/314 (58%), Gaps = 1/314 (0%)
 Frame = -1

Query: 941  FNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYM 762
            FN++      + +   AF F       L     I T+N L+  LC+    D    + + +
Sbjct: 261  FNILIQGLCGIRDVYTAFEFLN-EMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLREL 319

Query: 761  KTDGYLVESSI-LESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSLLSLLM 585
            ++   L   ++   SV+      G+   A  +       G +  +   TF  N+L+    
Sbjct: 320  QSRSELSPDAVTFTSVISGYCKLGRMSEASSLFAEMINSGIKPAAA--TF--NALIDGHA 375

Query: 584  KRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPD 405
            K   +  AV   + ++  +    PDT +FNI+IRGLC VG V  AFEFF DMG FGC PD
Sbjct: 376  KAGDMASAVCLFRRNM--TLHFQPDTWTFNILIRGLCGVGKVHTAFEFFKDMGKFGCSPD 433

Query: 404  IVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDEAINLM 225
            ++TYNTLI+GLC   +VDR   LL  ++ ++ LSPDVVT+TSVISGYCKLG+M EA  L 
Sbjct: 434  VITYNTLISGLCRNNEVDRGFDLLREVQSKSKLSPDVVTFTSVISGYCKLGQMKEASFLF 493

Query: 224  DEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRT 45
            DEMI +GI PN  TFN LI+GFGK GDM SAI  + +M   GY PDVV+FTSLIDGYCR 
Sbjct: 494  DEMINFGIKPNTFTFNALIDGFGKAGDMASAITFFAKMLFHGYHPDVVSFTSLIDGYCRV 553

Query: 44   GELDQGLKLWDEMN 3
            G L+QGLKLW EMN
Sbjct: 554  GNLNQGLKLWREMN 567



 Score =  127 bits (320), Expect = 8e-27
 Identities = 78/279 (27%), Positives = 140/279 (50%)
 Frame = -1

Query: 866  INLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKF 687
            IN  +  +  TFN L+    + G    A  +F+   T  +  ++     ++  L   GK 
Sbjct: 356  INSGIKPAAATFNALIDGHAKAGDMASAVCLFRRNMTLHFQPDTWTFNILIRGLCGVGKV 415

Query: 686  GIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDT 507
              A E   + G+ G     I     +N+L+S L + + VD     L++   +SK L PD 
Sbjct: 416  HTAFEFFKDMGKFGCSPDVIT----YNTLISGLCRNNEVDRGFDLLREVQSKSK-LSPDV 470

Query: 506  CSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSN 327
             +F  VI G C++G + +A   F++M +FG  P+  T+N LI+G    G +  A    + 
Sbjct: 471  VTFTSVISGYCKLGQMKEASFLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITFFAK 530

Query: 326  LELQNGLSPDVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIG 147
            + L +G  PDVV++TS+I GYC++G +++ + L  EM    + PN  TF++LI+   +  
Sbjct: 531  M-LFHGYHPDVVSFTSLIDGYCRVGNLNQGLKLWREMNERSVRPNGYTFSVLIHALCRNN 589

Query: 146  DMFSAINMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQ 30
             +  A +   ++      P+   +  ++DG+C+ G +D+
Sbjct: 590  RLHEARDFLKQLSCTNIIPEPFIYNPIVDGFCKAGNVDE 628



 Score =  103 bits (257), Expect = 2e-19
 Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 5/315 (1%)
 Frame = -1

Query: 971  FRHNLDPHI-----AFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLC 807
            FR N+  H       FN++      +     AF FF+           + T+N L+  LC
Sbjct: 387  FRRNMTLHFQPDTWTFNILIRGLCGVGKVHTAFEFFKDMG-KFGCSPDVITYNTLISGLC 445

Query: 806  QMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSI 627
            +    D    + + +++   L    +  + V++     K G  KE      E+    G  
Sbjct: 446  RNNEVDRGFDLLREVQSKSKLSPDVVTFTSVIS--GYCKLGQMKEASFLFDEM-INFGIK 502

Query: 626  VRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAF 447
              TF  N+L+    K   +  A+ F    +       PD  SF  +I G CRVG +++  
Sbjct: 503  PNTFTFNALIDGFGKAGDMASAITFFAKMLFHGYH--PDVVSFTSLIDGYCRVGNLNQGL 560

Query: 446  EFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISG 267
            + + +M      P+  T++ LI+ LC   ++  AR  L  L   N + P+   Y  ++ G
Sbjct: 561  KLWREMNERSVRPNGYTFSVLIHALCRNNRLHEARDFLKQLSCTN-IIPEPFIYNPIVDG 619

Query: 266  YCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPD 87
            +CK G +DEA  ++  M   G  P+ VTF ILI G    G M  AI ++ +M AVG  P+
Sbjct: 620  FCKAGNVDEANMIVAGMEGKGCKPDKVTFTILIIGNCMKGRMLEAIGVFNKMKAVGCAPE 679

Query: 86   VVTFTSLIDGYCRTG 42
              T   LI    + G
Sbjct: 680  SRTANCLISCLLKAG 694


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  283 bits (725), Expect = 9e-74
 Identities = 161/379 (42%), Positives = 224/379 (59%), Gaps = 15/379 (3%)
 Frame = -1

Query: 1094 ISRFHAHHASSKSFGP-----------ESIWFTKVVCLLCFQESLDVFDSH----YFRHN 960
            I+ FH H        P              W  K+V  L       V DS     Y   N
Sbjct: 10   IAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYR---VPDSDLCFCYLSKN 66

Query: 959  LDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLAT 780
            L+P I+F V+  ++   NNP + FRF++ +R  LN+ HS  T+NLL  SLC+ G HDLA 
Sbjct: 67   LNPFISFEVVKKLD---NNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAG 123

Query: 779  LVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSL 600
             +F+ MK+DG    + +L  +V + A  GK   A  +L+   E+   EG  +   V NSL
Sbjct: 124  QMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEV---EGCCM---VVNSL 177

Query: 599  LSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSF 420
            L+ L+K  RV++A+    +H+        DT +FNI+IRGLC VG  +KA E    M  F
Sbjct: 178  LNTLVKLDRVEDAMKLFDEHLRFQS--CNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235

Query: 419  GCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDE 240
            GC PDIVTYNTLI G C   ++++A  +  +++  +  SPDVVTYTS+ISGYCK G+M E
Sbjct: 236  GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295

Query: 239  AINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLID 60
            A +L+D+M+  GI P  VTFN+L++G+ K G+M +A  + G+M + G  PDVVTFTSLID
Sbjct: 296  ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355

Query: 59   GYCRTGELDQGLKLWDEMN 3
            GYCR G++ QG +LW+EMN
Sbjct: 356  GYCRVGQVSQGFRLWEEMN 374



 Score =  120 bits (301), Expect = 1e-24
 Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1004 QESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNL 825
            ++++ +FD H    + +    FN++      +     A                I T+N 
Sbjct: 188  EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS-GFGCEPDIVTYNT 246

Query: 824  LLISLCQMGCHDLATLVFKYMKTDGYLVESSIL-ESVVLALANAGKFGIAKEILINKGEL 648
            L+   C+    + A+ +FK +K+        +   S++     AGK   A  +L +   L
Sbjct: 247  LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306

Query: 647  GSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRL----FPDTCSFNIVIRG 480
            G    ++  TF  N L+    K   +      L    +R K +    FPD  +F  +I G
Sbjct: 307  GIYPTNV--TF--NVLVDGYAKAGEM------LTAEEIRGKMISFGCFPDVVTFTSLIDG 356

Query: 479  LCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSP 300
             CRVG V + F  + +M + G FP+  TY+ LIN LC   ++ +AR LL  L  ++ + P
Sbjct: 357  YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD-IIP 415

Query: 299  DVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMY 120
                Y  VI G+CK G+++EA  +++EM      P+ +TF ILI G    G MF A++++
Sbjct: 416  QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475

Query: 119  GRMCAVGYPPDVVTFTSLIDGYCRTG 42
             +M A+G  PD +T +SL+    + G
Sbjct: 476  HKMVAIGCSPDKITVSSLLSCLLKAG 501



 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 51/192 (26%), Positives = 93/192 (48%)
 Frame = -1

Query: 866 INLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKF 687
           I+      + TF  L+   C++G       +++ M   G    +     ++ AL N  + 
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398

Query: 686 GIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDT 507
             A+E+L   G+L S++  I + F++N ++    K  +V+EA   +++  +  K+  PD 
Sbjct: 399 LKARELL---GQLASKD-IIPQPFMYNPVIDGFCKAGKVNEANVIVEE--MEKKKCKPDK 452

Query: 506 CSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSN 327
            +F I+I G C  G + +A   F+ M + GC PD +T ++L++ L   G    A  L  N
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL--N 510

Query: 326 LELQNGLSPDVV 291
              + G S +VV
Sbjct: 511 QIARKGQSNNVV 522


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|42570711|ref|NP_973429.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
            [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|330250896|gb|AEC05990.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|330250897|gb|AEC05991.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  283 bits (725), Expect = 9e-74
 Identities = 161/379 (42%), Positives = 224/379 (59%), Gaps = 15/379 (3%)
 Frame = -1

Query: 1094 ISRFHAHHASSKSFGP-----------ESIWFTKVVCLLCFQESLDVFDSH----YFRHN 960
            I+ FH H        P              W  K+V  L       V DS     Y   N
Sbjct: 10   IAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYR---VPDSDLCFCYLSKN 66

Query: 959  LDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNLLLISLCQMGCHDLAT 780
            L+P I+F V+  ++   NNP + FRF++ +R  LN+ HS  T+NLL  SLC+ G HDLA 
Sbjct: 67   LNPFISFEVVKKLD---NNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAG 123

Query: 779  LVFKYMKTDGYLVESSILESVVLALANAGKFGIAKEILINKGELGSEEGSIVRTFVHNSL 600
             +F+ MK+DG    + +L  +V + A  GK   A  +L+   E+   EG  +   V NSL
Sbjct: 124  QMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEV---EGCCM---VVNSL 177

Query: 599  LSLLMKRSRVDEAVGFLKDHILRSKRLFPDTCSFNIVIRGLCRVGGVDKAFEFFNDMGSF 420
            L+ L+K  RV++A+    +H+        DT +FNI+IRGLC VG  +KA E    M  F
Sbjct: 178  LNTLVKLDRVEDAMKLFDEHLRFQS--CNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235

Query: 419  GCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSPDVVTYTSVISGYCKLGRMDE 240
            GC PDIVTYNTLI G C   ++++A  +  +++  +  SPDVVTYTS+ISGYCK G+M E
Sbjct: 236  GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295

Query: 239  AINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMYGRMCAVGYPPDVVTFTSLID 60
            A +L+D+M+  GI P  VTFN+L++G+ K G+M +A  + G+M + G  PDVVTFTSLID
Sbjct: 296  ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355

Query: 59   GYCRTGELDQGLKLWDEMN 3
            GYCR G++ QG +LW+EMN
Sbjct: 356  GYCRVGQVSQGFRLWEEMN 374



 Score =  120 bits (301), Expect = 1e-24
 Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1004 QESLDVFDSHYFRHNLDPHIAFNVIDHINTNLNNPRLAFRFFQCTRINLNLVHSIGTFNL 825
            ++++ +FD H    + +    FN++      +     A                I T+N 
Sbjct: 188  EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS-GFGCEPDIVTYNT 246

Query: 824  LLISLCQMGCHDLATLVFKYMKTDGYLVESSIL-ESVVLALANAGKFGIAKEILINKGEL 648
            L+   C+    + A+ +FK +K+        +   S++     AGK   A  +L +   L
Sbjct: 247  LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306

Query: 647  GSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRL----FPDTCSFNIVIRG 480
            G    ++  TF  N L+    K   +      L    +R K +    FPD  +F  +I G
Sbjct: 307  GIYPTNV--TF--NVLVDGYAKAGEM------LTAEEIRGKMISFGCFPDVVTFTSLIDG 356

Query: 479  LCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSNLELQNGLSP 300
             CRVG V + F  + +M + G FP+  TY+ LIN LC   ++ +AR LL  L  ++ + P
Sbjct: 357  YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD-IIP 415

Query: 299  DVVTYTSVISGYCKLGRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAINMY 120
                Y  VI G+CK G+++EA  +++EM      P+ +TF ILI G    G MF A++++
Sbjct: 416  QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475

Query: 119  GRMCAVGYPPDVVTFTSLIDGYCRTG 42
             +M A+G  PD +T +SL+    + G
Sbjct: 476  HKMVAIGCSPDKITVSSLLSCLLKAG 501



 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 51/192 (26%), Positives = 93/192 (48%)
 Frame = -1

Query: 866 INLNLVHSIGTFNLLLISLCQMGCHDLATLVFKYMKTDGYLVESSILESVVLALANAGKF 687
           I+      + TF  L+   C++G       +++ M   G    +     ++ AL N  + 
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398

Query: 686 GIAKEILINKGELGSEEGSIVRTFVHNSLLSLLMKRSRVDEAVGFLKDHILRSKRLFPDT 507
             A+E+L   G+L S++  I + F++N ++    K  +V+EA   +++  +  K+  PD 
Sbjct: 399 LKARELL---GQLASKD-IIPQPFMYNPVIDGFCKAGKVNEANVIVEE--MEKKKCKPDK 452

Query: 506 CSFNIVIRGLCRVGGVDKAFEFFNDMGSFGCFPDIVTYNTLINGLCAVGQVDRARGLLSN 327
            +F I+I G C  G + +A   F+ M + GC PD +T ++L++ L   G    A  L  N
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL--N 510

Query: 326 LELQNGLSPDVV 291
              + G S +VV
Sbjct: 511 QIARKGQSNNVV 522