BLASTX nr result
ID: Atropa21_contig00016232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00016232
(565 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr... 128 1e-27
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote... 127 2e-27
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is... 126 4e-27
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 126 4e-27
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote... 125 6e-27
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275... 125 7e-27
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 125 1e-26
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me... 124 1e-26
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 124 2e-26
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote... 123 4e-26
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri... 123 4e-26
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus... 122 5e-26
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 122 5e-26
ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutr... 121 1e-25
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe... 120 2e-25
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote... 120 2e-25
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5... 120 2e-25
ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabi... 120 3e-25
ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arab... 119 7e-25
gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica] 118 9e-25
>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
gi|568822947|ref|XP_006465886.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm1-like [Citrus
sinensis] gi|557528691|gb|ESR39941.1| hypothetical
protein CICLE_v10026767mg [Citrus clementina]
Length = 128
Score = 128 bits (321), Expect = 1e-27
Identities = 62/88 (70%), Positives = 69/88 (78%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
P+D+Y STSLASY GTLCSFDQFANAVL+GACER IVGDLYCDIP
Sbjct: 6 PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ +ELPPH+
Sbjct: 66 LGLYVIRGENVVLIGELDLERDELPPHL 93
>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 127 bits (319), Expect = 2e-27
Identities = 66/88 (75%), Positives = 68/88 (77%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIYTSTSLASY G L SFDQFANAVL+ ACERAIVGDLYCDIP
Sbjct: 6 PEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLYIIRGENVVLIGELD+D EELPPHM
Sbjct: 66 LGLYIIRGENVVLIGELDVDKEELPPHM 93
>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 128
Score = 126 bits (316), Expect = 4e-27
Identities = 64/88 (72%), Positives = 68/88 (77%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GAC+R IVGDLYCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDLEREELPPHM 93
>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
[Cicer arietinum]
Length = 128
Score = 126 bits (316), Expect = 4e-27
Identities = 63/88 (71%), Positives = 68/88 (77%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GACER +VGDLYCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELD++ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDMEREELPPHM 93
>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
lycopersicum]
Length = 128
Score = 125 bits (315), Expect = 6e-27
Identities = 64/88 (72%), Positives = 68/88 (77%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GACER IVG++YCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEIYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLYIIRGENVVLIGELD+D EELPPHM
Sbjct: 66 LGLYIIRGENVVLIGELDVDKEELPPHM 93
>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
putative [Ricinus communis]
Length = 128
Score = 125 bits (314), Expect = 7e-27
Identities = 65/88 (73%), Positives = 67/88 (76%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY G L SFDQFANAVL+GACER IVGDLYCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLYIIRGENVVLIGELDL+ EELPPHM
Sbjct: 66 LGLYIIRGENVVLIGELDLEKEELPPHM 93
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 125 bits (313), Expect = 1e-26
Identities = 64/88 (72%), Positives = 67/88 (76%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY G L SFDQFANAVL+GACER IVGDLYCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDLEKEELPPHM 93
>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
protein LSm1 [Medicago truncatula]
Length = 131
Score = 124 bits (312), Expect = 1e-26
Identities = 62/88 (70%), Positives = 68/88 (77%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PED+Y STSLASY GTL SFDQFANAVL+GACER IVGDLYCDIP
Sbjct: 6 PEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGE+D++ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGEMDVEREELPPHM 93
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
Length = 128
Score = 124 bits (311), Expect = 2e-26
Identities = 64/88 (72%), Positives = 67/88 (76%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GACER IVGDLYCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELP HM
Sbjct: 66 LGLYVIRGENVVLIGELDLEREELPEHM 93
>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
tuberosum]
Length = 128
Score = 123 bits (308), Expect = 4e-26
Identities = 63/87 (72%), Positives = 67/87 (77%)
Frame = -2
Query: 261 EDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIPL 82
EDIY STSLASY GTL SFDQFANAVL+GACER IVG++YCDIPL
Sbjct: 7 EDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEIYCDIPL 66
Query: 81 GLYIIRGENVVLIGELDLDMEELPPHM 1
GLYIIRGENVVLIGELD+D EELPPHM
Sbjct: 67 GLYIIRGENVVLIGELDVDKEELPPHM 93
>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 123 bits (308), Expect = 4e-26
Identities = 64/88 (72%), Positives = 67/88 (76%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY G L SFDQFANAVL+GACERAIVGDLYCDI
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDLYCDIH 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDLEREELPPHM 93
>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 122 bits (307), Expect = 5e-26
Identities = 63/88 (71%), Positives = 67/88 (76%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GACER IVG+LYCDIP
Sbjct: 6 PEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGELYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELP HM
Sbjct: 66 LGLYVIRGENVVLIGELDLEREELPEHM 93
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 122 bits (307), Expect = 5e-26
Identities = 62/88 (70%), Positives = 67/88 (76%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PED+ STSLASY G L SFDQFANAVL+GACERAIVGD+YCDIP
Sbjct: 6 PEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVL+GELDLD EELPPHM
Sbjct: 66 LGLYVIRGENVVLLGELDLDKEELPPHM 93
>ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
gi|557108276|gb|ESQ48583.1| hypothetical protein
EUTSA_v10021763mg [Eutrema salsugineum]
Length = 128
Score = 121 bits (304), Expect = 1e-25
Identities = 62/88 (70%), Positives = 66/88 (75%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GACER IVG+ YCDIP
Sbjct: 6 PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELD + EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDTEREELPPHM 93
>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
Length = 128
Score = 120 bits (302), Expect = 2e-25
Identities = 61/88 (69%), Positives = 66/88 (75%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PED+Y STSLASY G L SFDQFANAVL+GACER IVG+LYCDIP
Sbjct: 6 PEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGELYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELD + EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDSEREELPPHM 93
>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
vesca subsp. vesca]
Length = 128
Score = 120 bits (301), Expect = 2e-25
Identities = 60/88 (68%), Positives = 66/88 (75%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PED+Y STSLASY G L SFDQFANAVL+GACER IVG+LYCD+P
Sbjct: 6 PEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGELYCDLP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELD + EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDAEREELPPHM 93
>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|566149434|ref|XP_006369123.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550347483|gb|ERP65692.1| small
nuclear ribonucleoprotein [Populus trichocarpa]
Length = 128
Score = 120 bits (301), Expect = 2e-25
Identities = 62/88 (70%), Positives = 66/88 (75%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLA+Y G L SFDQFANAVL+GACER IVGDLYCDI
Sbjct: 6 PEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDLYCDIH 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDLEREELPPHM 93
>ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like
protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative
[Arabidopsis thaliana] gi|27754337|gb|AAO22620.1|
putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein
[Arabidopsis thaliana] gi|332641944|gb|AEE75465.1| U6
snRNA-associated Sm-like protein LSm1 [Arabidopsis
thaliana] gi|332641945|gb|AEE75466.1| U6
snRNA-associated Sm-like protein LSm1 [Arabidopsis
thaliana]
Length = 128
Score = 120 bits (300), Expect = 3e-25
Identities = 61/88 (69%), Positives = 66/88 (75%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PE+IY STSLASY GTL SFDQFANAVL+GACER IVG+ YCDIP
Sbjct: 6 PEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELD + EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDTEREELPPHM 93
>ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata] gi|565482348|ref|XP_006298814.1| hypothetical
protein CARUB_v10014920mg [Capsella rubella]
gi|297328707|gb|EFH59126.1| hypothetical protein
ARALYDRAFT_478821 [Arabidopsis lyrata subsp. lyrata]
gi|482567523|gb|EOA31712.1| hypothetical protein
CARUB_v10014920mg [Capsella rubella]
Length = 128
Score = 119 bits (297), Expect = 7e-25
Identities = 61/88 (69%), Positives = 66/88 (75%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDIY STSLASY GTL SFDQFANAVL+GACER IVG+ YCDIP
Sbjct: 6 PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELD + EELPP+M
Sbjct: 66 LGLYVIRGENVVLIGELDTEREELPPNM 93
>gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 118 bits (296), Expect = 9e-25
Identities = 61/88 (69%), Positives = 65/88 (73%)
Frame = -2
Query: 264 PEDIYTSTSLASYXXXXXXXXXXXXXXXXGTLCSFDQFANAVLQGACERAIVGDLYCDIP 85
PEDI STSLA+Y G L SFDQFAN VL+GACER IVGDLYCDIP
Sbjct: 6 PEDISLSTSLATYLDKKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP 65
Query: 84 LGLYIIRGENVVLIGELDLDMEELPPHM 1
LGLY+IRGENVVLIGELDL+ EELPPHM
Sbjct: 66 LGLYVIRGENVVLIGELDLEKEELPPHM 93