BLASTX nr result
ID: Atropa21_contig00015942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00015942
(579 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230481.1| PREDICTED: serine hydroxymethyltransferase 2... 93 6e-17
ref|XP_006349365.1| PREDICTED: serine hydroxymethyltransferase 7... 90 5e-16
emb|CBI23759.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1... 88 1e-15
gb|EOX98086.1| Serine hydroxymethyltransferase 6 isoform 1 [Theo... 78 3e-15
ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr... 75 1e-14
gb|EXC20806.1| Serine hydroxymethyltransferase 2 [Morus notabilis] 85 1e-14
gb|ACN26253.1| unknown [Zea mays] gi|414879458|tpg|DAA56589.1| T... 85 1e-14
ref|NP_001130435.1| serine hydroxymethyltransferase [Zea mays] g... 85 1e-14
gb|ESW20517.1| hypothetical protein PHAVU_006G216000g [Phaseolus... 74 2e-14
gb|EMT16954.1| Serine hydroxymethyltransferase 1 [Aegilops tausc... 80 2e-14
ref|XP_002513846.1| serine hydroxymethyltransferase, putative [R... 85 2e-14
gb|EEE63803.1| hypothetical protein OsJ_18627 [Oryza sativa Japo... 85 2e-14
ref|NP_001055615.1| Os05g0429000 [Oryza sativa Japonica Group] g... 85 2e-14
ref|XP_004307235.1| PREDICTED: serine hydroxymethyltransferase 1... 83 4e-14
gb|EEC79270.1| hypothetical protein OsI_20056 [Oryza sativa Indi... 83 4e-14
gb|EOX98088.1| Serine hydroxymethyltransferase 6 isoform 3 [Theo... 78 6e-14
ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group] g... 82 1e-13
gb|EOY16134.1| Serine hydroxymethyltransferase 6 isoform 2 [Theo... 82 1e-13
gb|EOY16133.1| Serine hydroxymethyltransferase 6 isoform 1 [Theo... 82 1e-13
>ref|XP_004230481.1| PREDICTED: serine hydroxymethyltransferase 2-like [Solanum
lycopersicum]
Length = 594
Score = 92.8 bits (229), Expect = 6e-17
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRT 364
PAMTSRGC ENDF+ +ADFLL AAQI NS+Q+EHG+LAK FLKGLENN D+IELRT
Sbjct: 523 PAMTSRGCIENDFDTMADFLLKAAQITNSIQREHGKLAKGFLKGLENNKDVIELRT 578
>ref|XP_006349365.1| PREDICTED: serine hydroxymethyltransferase 7-like [Solanum
tuberosum]
Length = 594
Score = 89.7 bits (221), Expect = 5e-16
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRT 364
PAMTSRGC E+DF+ +ADFLL AAQI NS+Q+EHG+LAK FLKG+ENN D+IELRT
Sbjct: 523 PAMTSRGCIESDFDTMADFLLKAAQITNSIQREHGKLAKGFLKGVENNKDVIELRT 578
>emb|CBI23759.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRTLLKI 352
PAMTSRGC E DFE IADFLL AAQIA+ VQ+EHG++ K FLKGLE+N DI+ELRT ++I
Sbjct: 274 PAMTSRGCLEADFETIADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEI 333
>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 577
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRTLLKI 352
PAMTSRGC E DFE IADFLL AAQIA+ VQ+EHG++ K FLKGLE+N DI+ELRT ++I
Sbjct: 506 PAMTSRGCLEADFETIADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEI 565
>gb|EOX98086.1| Serine hydroxymethyltransferase 6 isoform 1 [Theobroma cacao]
Length = 596
Score = 78.2 bits (191), Expect(2) = 3e-15
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRT 364
PAMTSRGC E+DFE IADFLL AA IA+ +Q++HG+L K LK L NN D++ELRT
Sbjct: 523 PAMTSRGCLESDFETIADFLLRAAHIASMMQRDHGKLQKASLKSLHNNKDLLELRT 578
Score = 29.3 bits (64), Expect(2) = 3e-15
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3
Query: 577 FDDNGSMIPGGLRIGT 530
F DNG++ PGG+RIGT
Sbjct: 507 FGDNGAITPGGVRIGT 522
>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|355482048|gb|AES63251.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 593
Score = 75.5 bits (184), Expect(2) = 1e-14
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMTSRGC E DFE +ADFL AAQIAN +Q+EHG+L K K LE+N DI+ELR
Sbjct: 522 PAMTSRGCLEADFETMADFLFRAAQIANMLQREHGKLQKTISKVLESNRDILELR 576
Score = 30.0 bits (66), Expect(2) = 1e-14
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 577 FDDNGSMIPGGLRIGT 530
F DNG +IPGG+RIGT
Sbjct: 506 FGDNGIIIPGGVRIGT 521
>gb|EXC20806.1| Serine hydroxymethyltransferase 2 [Morus notabilis]
Length = 621
Score = 85.1 bits (209), Expect = 1e-14
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMTSRGC E DFE IADFL+ AAQI SVQKEHG++AK F+KGL+NN DIIELR
Sbjct: 550 PAMTSRGCLEADFERIADFLIRAAQITCSVQKEHGKMAKDFVKGLQNNRDIIELR 604
>gb|ACN26253.1| unknown [Zea mays] gi|414879458|tpg|DAA56589.1| TPA: hypothetical
protein ZEAMMB73_385949 [Zea mays]
Length = 446
Score = 85.1 bits (209), Expect = 1e-14
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMT+RGC E DFE+IADFL+ A QIAN+V KEHG++ K FL+GL+NNND+IELR
Sbjct: 375 PAMTTRGCLEEDFEVIADFLIRATQIANNVLKEHGKVQKEFLRGLQNNNDVIELR 429
>ref|NP_001130435.1| serine hydroxymethyltransferase [Zea mays]
gi|194689112|gb|ACF78640.1| unknown [Zea mays]
gi|223949119|gb|ACN28643.1| unknown [Zea mays]
gi|414879459|tpg|DAA56590.1| TPA: serine
hydroxymethyltransferase [Zea mays]
Length = 588
Score = 85.1 bits (209), Expect = 1e-14
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMT+RGC E DFE+IADFL+ A QIAN+V KEHG++ K FL+GL+NNND+IELR
Sbjct: 517 PAMTTRGCLEEDFEVIADFLIRATQIANNVLKEHGKVQKEFLRGLQNNNDVIELR 571
>gb|ESW20517.1| hypothetical protein PHAVU_006G216000g [Phaseolus vulgaris]
gi|561021747|gb|ESW20518.1| hypothetical protein
PHAVU_006G216000g [Phaseolus vulgaris]
gi|561021748|gb|ESW20519.1| hypothetical protein
PHAVU_006G216000g [Phaseolus vulgaris]
Length = 564
Score = 74.3 bits (181), Expect(2) = 2e-14
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMTSRGC E DFE +ADFL+ AAQIAN++ +EH +L K KGL++N D++ELR
Sbjct: 493 PAMTSRGCVEPDFETMADFLIRAAQIANTLLREHAKLQKTAFKGLDSNRDVVELR 547
Score = 30.8 bits (68), Expect(2) = 2e-14
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3
Query: 577 FDDNGSMIPGGLRIGT 530
F DNG++IPGG+R+GT
Sbjct: 477 FGDNGTIIPGGVRVGT 492
>gb|EMT16954.1| Serine hydroxymethyltransferase 1 [Aegilops tauschii]
Length = 467
Score = 80.5 bits (197), Expect(2) = 2e-14
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIEL 370
PAMT+RGC E+DFE+IADFL+ A QIA SV K+HG++ K FL+GLENN DIIEL
Sbjct: 274 PAMTTRGCLEDDFEVIADFLIRATQIAGSVLKQHGKVQKEFLRGLENNKDIIEL 327
Score = 24.6 bits (52), Expect(2) = 2e-14
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 577 FDDNGSMIPGGLRI 536
+ DNGS+ PGG+RI
Sbjct: 257 YGDNGSISPGGVRI 270
>ref|XP_002513846.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223546932|gb|EEF48429.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 567
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMTSRGC E DFE IADFLL AAQIA ++Q+EHG++ K FLKGL+NN DI+ELR
Sbjct: 496 PAMTSRGCLEGDFETIADFLLRAAQIACAIQREHGKIQKEFLKGLQNNRDIVELR 550
>gb|EEE63803.1| hypothetical protein OsJ_18627 [Oryza sativa Japonica Group]
Length = 571
Score = 84.7 bits (208), Expect = 2e-14
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMT+RGC E+DFE++A+FLL AA IA+ V KEHGRL K FLKGLENNNDIIELR
Sbjct: 500 PAMTTRGCLESDFEIMAEFLLRAAHIASIVLKEHGRLQKDFLKGLENNNDIIELR 554
>ref|NP_001055615.1| Os05g0429000 [Oryza sativa Japonica Group]
gi|46391143|gb|AAS90670.1| putative
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|55733911|gb|AAV59418.1| putative
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|113579166|dbj|BAF17529.1| Os05g0429000 [Oryza sativa
Japonica Group] gi|215766518|dbj|BAG98826.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 587
Score = 84.7 bits (208), Expect = 2e-14
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMT+RGC E+DFE++A+FLL AA IA+ V KEHGRL K FLKGLENNNDIIELR
Sbjct: 516 PAMTTRGCLESDFEIMAEFLLRAAHIASIVLKEHGRLQKDFLKGLENNNDIIELR 570
>ref|XP_004307235.1| PREDICTED: serine hydroxymethyltransferase 1-like [Fragaria vesca
subsp. vesca]
Length = 563
Score = 83.2 bits (204), Expect = 4e-14
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRT 364
PAMT+RGC E+DFE IADFLL AAQI SVQ+EHG+ K FLKGL+NN DI+ELR+
Sbjct: 491 PAMTTRGCVESDFETIADFLLRAAQITVSVQREHGKYQKEFLKGLQNNKDIVELRS 546
>gb|EEC79270.1| hypothetical protein OsI_20056 [Oryza sativa Indica Group]
Length = 571
Score = 83.2 bits (204), Expect = 4e-14
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMT+RGC E+DFE++A+FLL AA IA+ V KEHGRL K FLKGLENNNDIIEL+
Sbjct: 500 PAMTTRGCLESDFEIMAEFLLRAAHIASIVLKEHGRLQKDFLKGLENNNDIIELQ 554
>gb|EOX98088.1| Serine hydroxymethyltransferase 6 isoform 3 [Theobroma cacao]
Length = 560
Score = 78.2 bits (191), Expect(2) = 6e-14
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELRT 364
PAMTSRGC E+DFE IADFLL AA IA+ +Q++HG+L K LK L NN D++ELRT
Sbjct: 489 PAMTSRGCLESDFETIADFLLRAAHIASMMQRDHGKLQKASLKSLHNNKDLLELRT 544
Score = 25.0 bits (53), Expect(2) = 6e-14
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 361 VENFASLFAIPGFEV 317
VE FAS FA+PG+++
Sbjct: 546 VETFASQFAMPGYDI 560
>ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group]
gi|19386847|dbj|BAB86225.1| putative
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|20804756|dbj|BAB92441.1| putative serine
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|113534491|dbj|BAF06874.1| Os01g0874900 [Oryza sativa
Japonica Group] gi|125528561|gb|EAY76675.1| hypothetical
protein OsI_04630 [Oryza sativa Indica Group]
gi|125572826|gb|EAZ14341.1| hypothetical protein
OsJ_04263 [Oryza sativa Japonica Group]
gi|215737211|dbj|BAG96140.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 600
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/55 (67%), Positives = 48/55 (87%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMT+RGC E+DFE+IADFL+ A QIA+++ KEHG++ K FL+GL+NN DIIELR
Sbjct: 529 PAMTTRGCLEDDFEVIADFLIRATQIASNLMKEHGKMQKEFLRGLQNNKDIIELR 583
>gb|EOY16134.1| Serine hydroxymethyltransferase 6 isoform 2 [Theobroma cacao]
Length = 509
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMTSRGC E+DFE +ADFL AAQIA++VQ++HG+L K FLKGL NN DI++LR
Sbjct: 438 PAMTSRGCLESDFETMADFLYRAAQIASAVQRDHGKLQKEFLKGLHNNKDIVDLR 492
>gb|EOY16133.1| Serine hydroxymethyltransferase 6 isoform 1 [Theobroma cacao]
Length = 575
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = -1
Query: 531 PAMTSRGCQENDFEMIADFLL*AAQIANSVQKEHGRLAKVFLKGLENNNDIIELR 367
PAMTSRGC E+DFE +ADFL AAQIA++VQ++HG+L K FLKGL NN DI++LR
Sbjct: 504 PAMTSRGCLESDFETMADFLYRAAQIASAVQRDHGKLQKEFLKGLHNNKDIVDLR 558