BLASTX nr result
ID: Atropa21_contig00015234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00015234
(1470 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348624.1| PREDICTED: transcription initiation factor T... 199 5e-64
ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252... 199 5e-64
ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263... 199 6e-64
gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 ... 121 6e-39
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207... 121 3e-38
ref|XP_002299376.1| transcription initiation factor IID 28 kDa s... 119 2e-37
ref|XP_002277017.1| PREDICTED: transcription initiation factor T... 114 9e-37
ref|XP_002532706.1| Transcription initiation factor TFIID subuni... 116 1e-36
gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus pe... 114 2e-36
ref|XP_004293845.1| PREDICTED: transcription initiation factor T... 111 3e-35
ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [S... 108 2e-34
ref|XP_004969544.1| PREDICTED: transcription initiation factor T... 107 5e-34
ref|XP_006468615.1| PREDICTED: transcription initiation factor T... 107 6e-34
ref|XP_006468617.1| PREDICTED: transcription initiation factor T... 107 6e-34
ref|XP_002303723.2| hypothetical protein POPTR_0003s15610g, part... 110 6e-34
ref|XP_006468616.1| PREDICTED: transcription initiation factor T... 107 1e-33
ref|NP_001152593.1| transcription initiation factor TFIID subuni... 105 1e-33
ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group] g... 105 1e-33
ref|XP_004515436.1| PREDICTED: transcription initiation factor T... 111 3e-33
ref|XP_006448556.1| hypothetical protein CICLE_v10016661mg [Citr... 105 5e-33
>ref|XP_006348624.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X1 [Solanum tuberosum]
gi|565363815|ref|XP_006348625.1| PREDICTED: transcription
initiation factor TFIID subunit 11-like isoform X2
[Solanum tuberosum] gi|565363817|ref|XP_006348626.1|
PREDICTED: transcription initiation factor TFIID subunit
11-like isoform X3 [Solanum tuberosum]
Length = 210
Score = 199 bits (506), Expect(2) = 5e-64
Identities = 105/136 (77%), Positives = 109/136 (80%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKA 1146
MKRSKDPFEA +EEQDDSPPESP G DENEGQD+ A NTDSRE PSTSKA
Sbjct: 1 MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDQGAVGVNMNESDDVNTDSREKPSTSKA 60
Query: 1145 ASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 966
S+SV TAGPISKPK E+MDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY
Sbjct: 61 TSVSVSTAGPISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 120
Query: 965 ESFRRPGFQKSNMKRL 918
ESFRR GFQKSNMKRL
Sbjct: 121 ESFRRSGFQKSNMKRL 136
Score = 74.3 bits (181), Expect(2) = 5e-64
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E AKMVMAERKDTGPIR CHIREAYRRLKLEGKIPKK + F
Sbjct: 167 ETAKMVMAERKDTGPIRPCHIREAYRRLKLEGKIPKKSVPRLF 209
>ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252686 [Solanum
lycopersicum]
Length = 210
Score = 199 bits (506), Expect(2) = 5e-64
Identities = 105/136 (77%), Positives = 109/136 (80%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKA 1146
MKRSKDPFEA +EEQDDSPPESP G DENEGQD+ A NTDSRE PSTSKA
Sbjct: 1 MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDQGAVGVNMNEGDDVNTDSREKPSTSKA 60
Query: 1145 ASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 966
S+SV TAGPISKPK E+MDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY
Sbjct: 61 TSVSVSTAGPISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 120
Query: 965 ESFRRPGFQKSNMKRL 918
ESFRR GFQKSNMKRL
Sbjct: 121 ESFRRSGFQKSNMKRL 136
Score = 74.3 bits (181), Expect(2) = 5e-64
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E AKMVMAERKDTGPIR CHIREAYRRLKLEGKIPKK + F
Sbjct: 167 ETAKMVMAERKDTGPIRPCHIREAYRRLKLEGKIPKKSVPRLF 209
>ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263908 [Solanum
lycopersicum]
Length = 210
Score = 199 bits (505), Expect(2) = 6e-64
Identities = 105/136 (77%), Positives = 108/136 (79%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKA 1146
MKRSKDPFEA +EEQDDSPPESP G DENEGQD A NTDSRE PSTSKA
Sbjct: 1 MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDHGAVGVNMNEGDDVNTDSREKPSTSKA 60
Query: 1145 ASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 966
S+SV TAGPISKPK E+MDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY
Sbjct: 61 TSVSVSTAGPISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 120
Query: 965 ESFRRPGFQKSNMKRL 918
ESFRR GFQKSNMKRL
Sbjct: 121 ESFRRSGFQKSNMKRL 136
Score = 74.3 bits (181), Expect(2) = 6e-64
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E AKMVMAERKDTGPIR CHIREAYRRLKLEGKIPKK + F
Sbjct: 167 ETAKMVMAERKDTGPIRPCHIREAYRRLKLEGKIPKKSVPRLF 209
>gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 isoform 1 [Theobroma
cacao]
Length = 225
Score = 121 bits (304), Expect(2) = 6e-39
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 15/151 (9%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDR--------AAXXXXXXXXXXXNTDSR 1170
MK+SKDPFEAA EEQ++SPP+SP+G DE + Q + NT++
Sbjct: 1 MKQSKDPFEAALEEQEESPPDSPIGQDELDSQTQNQTPTGHHTLVDDDDYDEIGTNTNNP 60
Query: 1169 ENPSTSK-------AASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKM 1011
+PS++ + + +V +A SK K EN+DV+LGK SS+DP K+AKM
Sbjct: 61 SHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELGKFPSSADPAKMAKM 120
Query: 1010 QSILSQFTEEQMSRYESFRRPGFQKSNMKRL 918
Q+ILSQFTE+QMSRYESFRR QKSNM+RL
Sbjct: 121 QAILSQFTEDQMSRYESFRRSALQKSNMRRL 151
Score = 68.2 bits (165), Expect(2) = 6e-39
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+MVM ERK++GPIR CHIREAYRRLKLEGK+PKK + F
Sbjct: 182 ETARMVMTERKESGPIRPCHIREAYRRLKLEGKVPKKSVQRLF 224
>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
gi|449494264|ref|XP_004159496.1| PREDICTED:
uncharacterized protein LOC101229675 [Cucumis sativus]
Length = 220
Score = 121 bits (303), Expect(2) = 3e-38
Identities = 72/149 (48%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKA 1146
MK+SKDPFEAA+EEQ++SPP SP D+ E A D ++P ++
Sbjct: 1 MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQ---DGDDDPKSASV 57
Query: 1145 ASISVGTAGPIS-------------KPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQS 1005
A+ SV A S K K EN++V+L K SS DPDK+AKMQ+
Sbjct: 58 ATHSVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 117
Query: 1004 ILSQFTEEQMSRYESFRRPGFQKSNMKRL 918
ILSQFTEEQMSRYESFRR GFQK+NMKRL
Sbjct: 118 ILSQFTEEQMSRYESFRRAGFQKANMKRL 146
Score = 66.2 bits (160), Expect(2) = 3e-38
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ER DTGPIR CH+REAYRRLKLEGKIP+K + F
Sbjct: 177 ETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLF 219
>ref|XP_002299376.1| transcription initiation factor IID 28 kDa subunit family protein
[Populus trichocarpa] gi|222846634|gb|EEE84181.1|
transcription initiation factor IID 28 kDa subunit family
protein [Populus trichocarpa]
Length = 222
Score = 119 bits (297), Expect(2) = 2e-37
Identities = 72/151 (47%), Positives = 93/151 (61%), Gaps = 15/151 (9%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQ--DRAAXXXXXXXXXXXNTD-------- 1176
MK+SKDPFEAAY EQ++SPPESPV D+ + Q + AA D
Sbjct: 1 MKQSKDPFEAAYVEQEESPPESPVAQDDYDTQASNAAAAADDSQGAVVGQDDDDLGGGGR 60
Query: 1175 -----SRENPSTSKAASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKM 1011
S ++PS S+ +G+A +K K +NMDV+L KL+S++DPDK+AKM
Sbjct: 61 NDFAHSSDHPSASRPM---LGSARSKAKNKDDDEEEEEDNMDVELSKLASTADPDKMAKM 117
Query: 1010 QSILSQFTEEQMSRYESFRRPGFQKSNMKRL 918
Q+IL+QFTE QMSRYESFRR QK+NMKRL
Sbjct: 118 QTILAQFTEGQMSRYESFRRSALQKTNMKRL 148
Score = 65.5 bits (158), Expect(2) = 2e-37
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ERK++GPIR CHIREAYRRLKLEGK+PK+ + F
Sbjct: 179 ETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 221
>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
product [Vitis vinifera]
Length = 198
Score = 114 bits (285), Expect(2) = 9e-37
Identities = 71/140 (50%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGI---DENEGQDRAAXXXXXXXXXXXNTDSRENPST 1155
MK+SKDPFE A+EE SPP+SPV + E +D A + +P++
Sbjct: 1 MKQSKDPFEVAFEES--SPPDSPVEEIVGGQIEDEDDA--------------NVNVHPTS 44
Query: 1154 SKAASISVGTA-GPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQ 978
+ +A+ S GT P +K K ENMDV+LGKL +S DP K+AKMQ+ILSQFTEEQ
Sbjct: 45 TPSAAPSSGTTVPPTAKSKDEDEEEEEENMDVELGKLPTSGDPHKMAKMQAILSQFTEEQ 104
Query: 977 MSRYESFRRPGFQKSNMKRL 918
MSRYESFRR GFQK+NMK+L
Sbjct: 105 MSRYESFRRSGFQKANMKKL 124
Score = 68.2 bits (165), Expect(2) = 9e-37
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+MVM ERK+TGPIR CHIREAYRRLKLEGK+P++ ++ F
Sbjct: 155 ETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRSVSRLF 197
>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
communis] gi|223527552|gb|EEF29673.1| Transcription
initiation factor TFIID subunit, putative [Ricinus
communis]
Length = 205
Score = 116 bits (290), Expect(2) = 1e-36
Identities = 64/137 (46%), Positives = 88/137 (64%)
Frame = -2
Query: 1328 SMKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSK 1149
+MK+SKDPFEAAYEEQ+++PPESP+G DE AA T +++ +
Sbjct: 9 AMKQSKDPFEAAYEEQEETPPESPLGADELLDSQTAA------------TTAQDPDAAVL 56
Query: 1148 AASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSR 969
+G++G S+ + N+DV+L K S++DPDK+AKMQ+ILSQFTE QM+R
Sbjct: 57 QEDDDIGSSGGGSREEFDEEEEE--NVDVELAKFPSTADPDKMAKMQAILSQFTENQMTR 114
Query: 968 YESFRRPGFQKSNMKRL 918
YESFRR QK+NM+RL
Sbjct: 115 YESFRRSALQKANMRRL 131
Score = 65.5 bits (158), Expect(2) = 1e-36
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ERK++GPIR CHIREAYRRLKLEGK+PK+ + F
Sbjct: 162 ETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 204
>gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus persica]
Length = 231
Score = 114 bits (286), Expect(2) = 2e-36
Identities = 71/158 (44%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDE-------NEGQD---------------RAAXX 1212
M +SKDPFEAA+EEQ+DSPP+SP D E D
Sbjct: 1 MDQSKDPFEAAFEEQEDSPPDSPAAPDAARTAPDTQEDDDPLLLPPGSKDPSSSATPLAA 60
Query: 1211 XXXXXXXXXNTDSRENPSTSKAASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSD 1032
T +R P+ + AA S + K ENMDV+LGK S++ D
Sbjct: 61 PPPPPPTTAVTTARTTPAATTAAP-STSARAVVKHNKDDDDDEDEENMDVELGKFSATGD 119
Query: 1031 PDKLAKMQSILSQFTEEQMSRYESFRRPGFQKSNMKRL 918
PDK+AKMQ+ILS+F+EEQMSRYESFRR GFQKSNMKRL
Sbjct: 120 PDKMAKMQAILSRFSEEQMSRYESFRRAGFQKSNMKRL 157
Score = 66.6 bits (161), Expect(2) = 2e-36
Identities = 29/43 (67%), Positives = 37/43 (86%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ERK++GPIR CHIREAYRRLKLEGK+PK+ ++ F
Sbjct: 188 ETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSMSRLF 230
>ref|XP_004293845.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Fragaria vesca subsp. vesca]
Length = 236
Score = 111 bits (278), Expect(2) = 3e-35
Identities = 73/164 (44%), Positives = 91/164 (55%), Gaps = 29/164 (17%)
Frame = -2
Query: 1322 KRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTD--SRENPSTSK 1149
++SKDPFEAA+EEQDDSPP+SP +D RAA S PSTS
Sbjct: 3 QQSKDPFEAAFEEQDDSPPDSPAAVDAI----RAALDEDYDEGLPPEEPPPSSSTPSTST 58
Query: 1148 AASISVGTAGPIS---------------KP------------KXXXXXXXXENMDVQLGK 1050
AA+ + TA ++ KP K +N+DV+LGK
Sbjct: 59 AAAAAPTTATAVATVTPTTKTLTKKSSAKPPIARAAKQSQQNKEEDDDEDEDNVDVELGK 118
Query: 1049 LSSSSDPDKLAKMQSILSQFTEEQMSRYESFRRPGFQKSNMKRL 918
++ DP K+AKMQ+ILS+F+EEQMSRYESFRR GFQKSNMKRL
Sbjct: 119 YPATGDPVKMAKMQAILSRFSEEQMSRYESFRRAGFQKSNMKRL 162
Score = 65.9 bits (159), Expect(2) = 3e-35
Identities = 28/43 (65%), Positives = 38/43 (88%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+MVM+ER+++GPIR CHIRE+YRRLKLEGK+PK+ ++ F
Sbjct: 193 ETARMVMSERRESGPIRPCHIRESYRRLKLEGKVPKRSVSRLF 235
>ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
gi|241928124|gb|EES01269.1| hypothetical protein
SORBIDRAFT_03g031220 [Sorghum bicolor]
Length = 209
Score = 108 bits (269), Expect(2) = 2e-34
Identities = 67/135 (49%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Frame = -2
Query: 1313 KDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPST--SKAAS 1140
KDPFEAA EEQD SPPESP +E G A + PS S AA+
Sbjct: 2 KDPFEAAVEEQD-SPPESPAPAEEEPGAAGPADDPEDYDGGGPRGLAPRQPSAPASHAAA 60
Query: 1139 ISVGTAGPISKPKXXXXXXXXENMDVQLGKL-SSSSDPDKLAKMQSILSQFTEEQMSRYE 963
+ G + + + + M+V L KL SS+ DPDKLAKM +ILSQFTE+QM+RYE
Sbjct: 61 AAAKAKGRVQREQQEDDDDEEDQMEVDLEKLPSSTGDPDKLAKMNAILSQFTEQQMNRYE 120
Query: 962 SFRRPGFQKSNMKRL 918
SFRR GFQKSNMKRL
Sbjct: 121 SFRRSGFQKSNMKRL 135
Score = 66.2 bits (160), Expect(2) = 2e-34
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ERKD+GPIR CHIREAYRRLKLEGKIP++ + F
Sbjct: 166 ETARVVMTERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLF 208
>ref|XP_004969544.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Setaria italica]
Length = 207
Score = 107 bits (266), Expect(2) = 5e-34
Identities = 63/133 (47%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Frame = -2
Query: 1313 KDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKAASIS 1134
KDPFEAA EEQD SPPESP +E G A R+ + + A+ +
Sbjct: 2 KDPFEAAVEEQD-SPPESPAPQEEEAGAAGPADDPEDYDGGPRAPPPRQASAPAALAAAA 60
Query: 1133 VGTAGPISKPKXXXXXXXXENMDVQLGKL-SSSSDPDKLAKMQSILSQFTEEQMSRYESF 957
G + + + + M+V L KL +S+ DPDKLAKM +ILSQFTE+QM+RYESF
Sbjct: 61 AKAKGRVQREQQEDEDDEEDQMEVDLEKLPTSTGDPDKLAKMNAILSQFTEQQMNRYESF 120
Query: 956 RRPGFQKSNMKRL 918
RR GFQKSNMKRL
Sbjct: 121 RRSGFQKSNMKRL 133
Score = 66.2 bits (160), Expect(2) = 5e-34
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ERKD+GPIR CHIREAYRRLKLEGKIP++ + F
Sbjct: 164 ETARIVMTERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLF 206
>ref|XP_006468615.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X1 [Citrus sinensis]
Length = 216
Score = 107 bits (268), Expect(2) = 6e-34
Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGID-ENEGQDRAAXXXXXXXXXXXNTDSRENPSTSK 1149
MK+SKDPFEAA EE SP +SP ++ E + Q A D +N +
Sbjct: 7 MKQSKDPFEAALEE---SPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQA 63
Query: 1148 AASISVGTAGPI--SKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQM 975
S+S G A + SK K EN+DV+LGK SSSDP K+AKMQ+IL+QFTE+QM
Sbjct: 64 PMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQM 123
Query: 974 SRYESFRRPGFQKSNMKRL 918
+RYESFRR QKSNM+RL
Sbjct: 124 NRYESFRRSALQKSNMRRL 142
Score = 65.1 bits (157), Expect(2) = 6e-34
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+MVM ER ++GPIR CHIREAYRRLKLEGK+PK+ + F
Sbjct: 173 ETARMVMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 215
>ref|XP_006468617.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X3 [Citrus sinensis]
Length = 210
Score = 107 bits (268), Expect(2) = 6e-34
Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGID-ENEGQDRAAXXXXXXXXXXXNTDSRENPSTSK 1149
MK+SKDPFEAA EE SP +SP ++ E + Q A D +N +
Sbjct: 1 MKQSKDPFEAALEE---SPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQA 57
Query: 1148 AASISVGTAGPI--SKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQM 975
S+S G A + SK K EN+DV+LGK SSSDP K+AKMQ+IL+QFTE+QM
Sbjct: 58 PMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQM 117
Query: 974 SRYESFRRPGFQKSNMKRL 918
+RYESFRR QKSNM+RL
Sbjct: 118 NRYESFRRSALQKSNMRRL 136
Score = 65.1 bits (157), Expect(2) = 6e-34
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+MVM ER ++GPIR CHIREAYRRLKLEGK+PK+ + F
Sbjct: 167 ETARMVMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 209
>ref|XP_002303723.2| hypothetical protein POPTR_0003s15610g, partial [Populus trichocarpa]
gi|550343255|gb|EEE78702.2| hypothetical protein
POPTR_0003s15610g, partial [Populus trichocarpa]
Length = 193
Score = 110 bits (275), Expect(2) = 6e-34
Identities = 67/137 (48%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKA 1146
MK SKDPFEAAY EQ++SPPESP+ D+ + Q DS+ + S A
Sbjct: 1 MKHSKDPFEAAYVEQEESPPESPIAQDDYDTQ--------TSNVAATPADSQGAVAVSVA 52
Query: 1145 A-SISVGTAGPISKPK-XXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMS 972
+G G K K +NMDV+L KL+S++DPDK+A MQ+IL+QFTEEQMS
Sbjct: 53 QDDDDLGGGGSDFKGKNKQDEEEEQDNMDVELWKLASTADPDKMANMQAILAQFTEEQMS 112
Query: 971 RYESFRRPGFQKSNMKR 921
RYESFRR QK+NMKR
Sbjct: 113 RYESFRRSALQKTNMKR 129
Score = 62.4 bits (150), Expect(2) = 6e-34
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKA 802
E A++VM ERK++GP R CH REAYRRLKLEGK+PK+ KA
Sbjct: 150 ETARLVMKERKESGPTRPCHSREAYRRLKLEGKVPKRSVTKA 191
>ref|XP_006468616.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X2 [Citrus sinensis]
Length = 213
Score = 107 bits (268), Expect(2) = 1e-33
Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGID-ENEGQDRAAXXXXXXXXXXXNTDSRENPSTSK 1149
MK+SKDPFEAA EE SP +SP ++ E + Q A D +N +
Sbjct: 7 MKQSKDPFEAALEE---SPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQA 63
Query: 1148 AASISVGTAGPI--SKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQM 975
S+S G A + SK K EN+DV+LGK SSSDP K+AKMQ+IL+QFTE+QM
Sbjct: 64 PMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQM 123
Query: 974 SRYESFRRPGFQKSNMKRL 918
+RYESFRR QKSNM+RL
Sbjct: 124 NRYESFRRSALQKSNMRRL 142
Score = 64.3 bits (155), Expect(2) = 1e-33
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKK 817
E A+MVM ER ++GPIR CHIREAYRRLKLEGK+PK+
Sbjct: 173 ETARMVMTERNESGPIRPCHIREAYRRLKLEGKVPKR 209
>ref|NP_001152593.1| transcription initiation factor TFIID subunit 11 [Zea mays]
gi|195657891|gb|ACG48413.1| transcription initiation
factor TFIID subunit 11 [Zea mays]
gi|414880994|tpg|DAA58125.1| TPA: transcription
initiation factor TFIID subunit 11 [Zea mays]
Length = 205
Score = 105 bits (262), Expect(2) = 1e-33
Identities = 64/133 (48%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Frame = -2
Query: 1313 KDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKAASIS 1134
KDPFEAA EEQD SPP+SP +E G A + + S AAS +
Sbjct: 2 KDPFEAAVEEQD-SPPDSPAPPEEEPGA--AGLADDAEDYDGGPPPRQPSAPASHAASAA 58
Query: 1133 VGTAGPISKPKXXXXXXXXENMDVQLGKL-SSSSDPDKLAKMQSILSQFTEEQMSRYESF 957
G + + + + M+V L KL SS+ DPDKLAKM +ILSQFT++QM+RYESF
Sbjct: 59 AKAKGRVQREQQEDDDDDEDQMEVDLDKLPSSTGDPDKLAKMNAILSQFTQQQMNRYESF 118
Query: 956 RRPGFQKSNMKRL 918
RR GFQKSNMKRL
Sbjct: 119 RRSGFQKSNMKRL 131
Score = 66.6 bits (161), Expect(2) = 1e-33
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM+ERKD+GPIR CHIREAYRRLKLEGKIP++ + F
Sbjct: 162 ETARVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLF 204
>ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group]
gi|56202157|dbj|BAD73490.1| transcription initiation
factor IID p30 beta chain-like [Oryza sativa Japonica
Group] gi|56202287|dbj|BAD73746.1| transcription
initiation factor IID p30 beta chain-like [Oryza sativa
Japonica Group] gi|215695424|dbj|BAG90663.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222619047|gb|EEE55179.1| hypothetical protein
OsJ_03014 [Oryza sativa Japonica Group]
gi|255673555|dbj|BAF05786.2| Os01g0680400 [Oryza sativa
Japonica Group]
Length = 211
Score = 105 bits (262), Expect(2) = 1e-33
Identities = 70/140 (50%), Positives = 86/140 (61%), Gaps = 8/140 (5%)
Frame = -2
Query: 1313 KDPFEAAYEEQDDSPPESPVGIDEN-----EGQDRAAXXXXXXXXXXXNTDSRENPSTS- 1152
KDPFEAA EEQ+ SPPESP +E+ EG D A+ SR PS S
Sbjct: 2 KDPFEAAVEEQE-SPPESPAANEEDAAGAPEGYDGASGSRGPPLRLPP---SRAAPSGSG 57
Query: 1151 -KAASISVGTAGPISKPKXXXXXXXXENMDVQLGKL-SSSSDPDKLAKMQSILSQFTEEQ 978
AA+ + G + K + ++M+V L KL S +SDPDKLAKM +ILSQFTE+Q
Sbjct: 58 GAAAAAARGKVVRVQKEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQ 117
Query: 977 MSRYESFRRPGFQKSNMKRL 918
M+RYESFRR GFQKSNMK+L
Sbjct: 118 MNRYESFRRSGFQKSNMKKL 137
Score = 66.2 bits (160), Expect(2) = 1e-33
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A++VM ERKD+GP+R CHIREAYRRLKLEGKIP++ + F
Sbjct: 168 ETARIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLF 210
>ref|XP_004515436.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X2 [Cicer arietinum]
Length = 201
Score = 111 bits (278), Expect(2) = 3e-33
Identities = 67/136 (49%), Positives = 82/136 (60%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGIDENEGQDRAAXXXXXXXXXXXNTDSRENPSTSKA 1146
MK+SKDPFEAA+EE SPP+SP+ ++ D A T + E K
Sbjct: 1 MKQSKDPFEAAFEE---SPPDSPIEVEP----DPEAENTRSNSLVAQPTHTHEEDGHMKN 53
Query: 1145 ASISVGTAGPISKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 966
S S T I K K +NMDV+L K ++ DP K+AKMQ++LSQFTEEQMSRY
Sbjct: 54 TSASNTTT--IVKNKDEEEDEEEDNMDVELAKFPAAGDPHKMAKMQAVLSQFTEEQMSRY 111
Query: 965 ESFRRPGFQKSNMKRL 918
ESFRR GFQK+NMKRL
Sbjct: 112 ESFRRAGFQKANMKRL 127
Score = 58.9 bits (141), Expect(2) = 3e-33
Identities = 25/43 (58%), Positives = 36/43 (83%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+++M ERK++GPIR CH+REA+RRLKLEGK+ K+ ++ F
Sbjct: 158 ETARIIMKERKESGPIRPCHLREAHRRLKLEGKVFKRTVSRLF 200
>ref|XP_006448556.1| hypothetical protein CICLE_v10016661mg [Citrus clementina]
gi|557551167|gb|ESR61796.1| hypothetical protein
CICLE_v10016661mg [Citrus clementina]
Length = 216
Score = 105 bits (261), Expect(2) = 5e-33
Identities = 66/139 (47%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Frame = -2
Query: 1325 MKRSKDPFEAAYEEQDDSPPESPVGID-ENEGQDRAAXXXXXXXXXXXNTDSRENPSTSK 1149
MK+SKDPFEAA EE SP +SP ++ E + Q A D +N +
Sbjct: 7 MKQSKDPFEAALEE---SPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQA 63
Query: 1148 AASISVGTAGPI--SKPKXXXXXXXXENMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQM 975
S+S A + SK K EN+DV+LGK SSSDP K+AKMQ+IL+QFTE+QM
Sbjct: 64 PMSVSADPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQM 123
Query: 974 SRYESFRRPGFQKSNMKRL 918
+RYESFRR QKSNM+RL
Sbjct: 124 NRYESFRRSALQKSNMRRL 142
Score = 64.7 bits (156), Expect(2) = 5e-33
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = -1
Query: 927 EAAKMVMAERKDTGPIRLCHIREAYRRLKLEGKIPKKISAKAF 799
E A+MVM ER ++GPIR CHIREAYRRLKLEGK+PK+ + F
Sbjct: 173 ETARMVMMERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLF 215