BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014985
         (595 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         155   8e-36
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   152   9e-35
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   142   7e-32
emb|CCH50954.1| T1.2 [Malus x robusta]                                137   2e-30
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...   130   3e-28
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   129   5e-28
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]     129   6e-28
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...   129   8e-28
gb|EMS53784.1| IAA-alanine resistance protein 1 [Triticum urartu]      97   1e-27
gb|EMS45856.1| Cystathionine gamma-synthase, chloroplastic [Trit...    93   1e-26
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       115   7e-24
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas...   114   2e-23
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   3e-23
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   3e-23
gb|EHJ70553.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   3e-23
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   3e-23
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   3e-23
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   112   8e-23
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   112   8e-23
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir...   111   2e-22

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  155 bits (392), Expect = 8e-36
 Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
 Frame = +2

Query: 140 LKRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISE 319
           L+ ++ P EWR ST++P+YKNKGDI SC NYRGIKL++HTMK+WERV++  +R+   ++E
Sbjct: 101 LRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTE 160

Query: 320 NQFGFMSGVRLQKPFILLGGWWSSI-GKERETYI*F----SSTSRVLREILWICLEIRGI 484
           NQFGFMSG  + +   LL          +R+ ++ F     +  RV RE+LW  LE   +
Sbjct: 161 NQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRV 220

Query: 485 PVAYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            +AY RAIKDMYDGA T V+T GG +E FP+ +GLHQ
Sbjct: 221 RIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQ 257



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
 Frame = +1

Query: 10  EIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDS 189
           E+K  + +M+  RA GPD IP+E  K  G   + WLTKLFN I ++ +MP         +
Sbjct: 58  EVKEALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWR---KST 114

Query: 190 SVXXXXXXXXXXXXXGYQAAK--PHYESLGKGREDEGEKRCVYF*ESVW-IHVGRSTTEA 360
            V              Y+  K   H   L +   + G ++     E+ +    GRS TEA
Sbjct: 115 LVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEA 174

Query: 361 IHLIRRLVEQYRERKRDLHMIFIDLE 438
           I+L+RR++E+YR  KRDLHM+FIDLE
Sbjct: 175 IYLLRRMMERYRSNKRDLHMVFIDLE 200


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score =  152 bits (383), Expect = 9e-35
 Identities = 75/157 (47%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
 Frame = +2

Query: 140 LKRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISE 319
           LK ++ P EWR S ++P+YKNKGD+ +C NYRGIKL+SHTMK+WERV++ R+R+   +S+
Sbjct: 211 LKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSD 270

Query: 320 NQFGFMSGVRLQKPFILLGGWWSSI-GKERETYI*F----SSTSRVLREILWICLEIRGI 484
           NQFGFM G    +   LL          +++ ++ F     +  RV R+I+W  LE +G+
Sbjct: 271 NQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDIIWRILEKKGV 330

Query: 485 PVAYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            VAY +AIKDMY+GAKT V+T  G +E FP+ +GLHQ
Sbjct: 331 RVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQ 367



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 49/144 (34%), Positives = 70/144 (48%)
 Frame = +1

Query: 7   EEIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYND 186
           EE+   +++M+  +A GPD+IP+E  K  G  G+ WL  LFN I KT +MP         
Sbjct: 167 EEVVVALKKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLV 226

Query: 187 SSVXXXXXXXXXXXXXGYQAAKPHYESLGKGREDEGEKRCVYF*ESVWIHVGRSTTEAIH 366
                           G +      +   +  E    +             GRST EAI+
Sbjct: 227 PIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIY 286

Query: 367 LIRRLVEQYRERKRDLHMIFIDLE 438
           L+RRL+E+YR+ K+DLHM+FIDLE
Sbjct: 287 LLRRLMERYRDGKKDLHMVFIDLE 310


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  142 bits (358), Expect = 7e-32
 Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
 Frame = +2

Query: 47  VRPDLMRSQLNFERAQAGQVWSG*LSCLMSFLKRRECPKEWRWSTMIPLYKNKGDI*SCN 226
           V PD +  ++       G VW   L      ++ ++   EWR ST+IP+ KNKGDI +C 
Sbjct: 160 VGPDNIPIEVWKSLGDRGTVWLANL--FNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCA 217

Query: 227 NYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFMSGVRLQKPFILLGGWWSSIGKE- 403
           NYRGIKL+SHTMK+WERV+K R+R+   +++NQFGFM G    +   LL         + 
Sbjct: 218 NYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDK 277

Query: 404 RETYI*F----SSTSRVLREILWICLEIRGIPVAYTRAIKDMYDGAKTRVQTVGGDSEHF 571
           ++ ++ F        RV REILW  LE + + +AY RAIKDMY+ A T V+T  G +E F
Sbjct: 278 KDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDF 337

Query: 572 PVMMGLHQ 595
           P+ +GLHQ
Sbjct: 338 PITIGLHQ 345


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  137 bits (346), Expect = 2e-30
 Identities = 74/157 (47%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
 Frame = +2

Query: 140 LKRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISE 319
           LK ++   EWR ST++P+YKNKGDI +C NYRGIKL+SHTMK+  RV++ R+R+   +S+
Sbjct: 230 LKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRLRQKTRVSD 289

Query: 320 NQFGFMSGVRLQKPFILLGGWWSSI-GKERETYI*FSST----SRVLREILWICLEIRGI 484
           NQF FM G    +   LL          + + ++ F        RV R+ILW  LE +G+
Sbjct: 290 NQFKFMPGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRDILWRILEKKGV 349

Query: 485 PVAYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            VAY +AIKDMYDGAKT V+T  G  E FP+ + LHQ
Sbjct: 350 RVAYIQAIKDMYDGAKTAVRTYEGQIESFPITVRLHQ 386


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score =  130 bits (326), Expect = 3e-28
 Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 4/155 (2%)
 Frame = +2

Query: 143 KRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISEN 322
           +  + P+EWR S ++P++KNKGD+  C NYRGIKL+SHTMK+WERV++ R+RR  S+++N
Sbjct: 361 RANKMPEEWRRSILVPIFKNKGDVQICTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKN 420

Query: 323 QFGFMSGVRLQKPFILLGGWWSSIGKE-RETYI*FSSTSRVLREI---LWICLEIRGIPV 490
           QFGFM G    +   L+        ++ ++ ++ F    +   +I   LW  L+   +P 
Sbjct: 421 QFGFMPGRSTMEAIFLVRQLMVRYREQKKDLHMVFIDLEKAYNKIPRNLWWALDKHKVPA 480

Query: 491 AYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            Y   IKDMYD A T V+T   D++ FP+ +GLHQ
Sbjct: 481 KYITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQ 515



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
 Frame = +1

Query: 31  RMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDSSVXXXXX 210
           RM+ G+A GPD IP+E  K  G   + WLTKLFN+IF+  +MP+          V     
Sbjct: 324 RMKGGKAMGPDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWR---RSILVPIFKN 380

Query: 211 XXXXXXXXGYQAAK--PHYESLGKGREDEGEKRCVYF*ESVW-IHVGRSTTEAIHLIRRL 381
                    Y+  K   H   L +   +   +R     ++ +    GRST EAI L+R+L
Sbjct: 381 KGDVQICTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQL 440

Query: 382 VEQYRERKRDLHMIFIDLE 438
           + +YRE+K+DLHM+FIDLE
Sbjct: 441 MVRYREQKKDLHMVFIDLE 459


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
           chalumnae]
          Length = 1500

 Score =  129 bits (325), Expect = 5e-28
 Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158 PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
           P EWR ST++P++K KGD+  CNNYRGI L+SH MK+WER+++ R+R+ V ISENQFGF 
Sbjct: 414 PTEWRESTLVPVFKRKGDVQDCNNYRGIALMSHAMKLWERIIEKRLRKLVQISENQFGFC 473

Query: 338 SG-VRLQKPFILLGGWWSSIGKERETYI*F----SSTSRVLREILWICLEIRGIPVAYTR 502
            G   +   F L         K ++ ++ F     +  RV R ++W C+  RGIP  Y R
Sbjct: 474 QGRSTIDAIFALKILMEKYKEKRKDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIR 533

Query: 503 AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            +KDMY G+K  V++  G +  FPV +G+ Q
Sbjct: 534 LVKDMYQGSKIWVRSACGTTTSFPVKVGVRQ 564



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
 Frame = +1

Query: 7   EEIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYND 186
           EE+   +++M+  +ATGPDE+P+E  K     GL  LT+L+  I++  +MP     E+ +
Sbjct: 364 EEVIQAMKKMKNRKATGPDEVPIETFKEMKEMGLVVLTRLYRAIWEEGKMP----TEWRE 419

Query: 187 SS-VXXXXXXXXXXXXXGYQ--AAKPHYESLGKGREDEGEKRCVYF*ESVW-IHVGRSTT 354
           S+ V              Y+  A   H   L +   ++  ++ V   E+ +    GRST 
Sbjct: 420 STLVPVFKRKGDVQDCNNYRGIALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTI 479

Query: 355 EAIHLIRRLVEQYRERKRDLHMIFIDLE 438
           +AI  ++ L+E+Y+E+++DLHM+F+DLE
Sbjct: 480 DAIFALKILMEKYKEKRKDLHMVFVDLE 507


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score =  129 bits (324), Expect = 6e-28
 Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 5/156 (3%)
 Frame = +2

Query: 143 KRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISEN 322
           +  + P+EWR S ++P++KNK D+  C NYRGIKL+SHTMK+WERV++ R+RR  S+++N
Sbjct: 31  RANKMPEEWRRSILVPIFKNKEDVQGCTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKN 90

Query: 323 QFGFMSGVRLQKPFILLGGWWSSIGKE-RETYI*F----SSTSRVLREILWICLEIRGIP 487
           QFGFM G    +   L+        ++ ++ ++ F     S  ++ R ++W  L+   +P
Sbjct: 91  QFGFMPGRSTMEAIFLVRQLMERYREQKKDLHMVFIDLEKSYDKIPRNVMWWALKKHKVP 150

Query: 488 VAYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
             Y   IKDMYD   T V+T   D++ FP+ +GLHQ
Sbjct: 151 AKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQ 186



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
 Frame = +1

Query: 55  GPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDSSVXXXXXXXXXXXXX 234
           GPD IP+E  K  G   + WLTKLFN+IF+  +MP+          V             
Sbjct: 2   GPDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWR---RSILVPIFKNKEDVQGCT 58

Query: 235 GYQAAK--PHYESLGKGREDEGEKRCVYF*ESVW-IHVGRSTTEAIHLIRRLVEQYRERK 405
            Y+  K   H   L +   +   +R     ++ +    GRST EAI L+R+L+E+YRE+K
Sbjct: 59  NYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQK 118

Query: 406 RDLHMIFIDLE 438
           +DLHM+FIDLE
Sbjct: 119 KDLHMVFIDLE 129


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score =  129 bits (323), Expect = 8e-28
 Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158 PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
           P+EWR S ++P++KNKGD+ S  NYRGIKL+SHTMK+WERV++ R+RR  S+++NQFGFM
Sbjct: 2   PEEWRLSILVPIFKNKGDVQSFTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFM 61

Query: 338 SGVRLQKPFILLGGWWSSIGKE-RETYI*F----SSTSRVLREILWICLEIRGIPVAYTR 502
            G    +   L+        ++ ++ ++ F     +  ++ R ++W  LE   +P  Y  
Sbjct: 62  PGRSTMEAIFLVRQLMKRYREQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYIT 121

Query: 503 AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            IKDMYD   T V+T   D + FP+ +GLHQ
Sbjct: 122 LIKDMYDNVVTSVRTSDVDIDDFPIKIGLHQ 152


>gb|EMS53784.1| IAA-alanine resistance protein 1 [Triticum urartu]
          Length = 722

 Score = 97.1 bits (240), Expect(2) = 1e-27
 Identities = 40/67 (59%), Positives = 56/67 (83%)
 Frame = +2

Query: 143 KRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISEN 322
           +  + P EWR S ++P++KNKGD+ SC+NYRGIKL+SHTMK+WERV++ R+RR  S+++N
Sbjct: 500 RANKMPGEWRRSILVPIFKNKGDVQSCSNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKN 559

Query: 323 QFGFMSG 343
           QFGFM G
Sbjct: 560 QFGFMPG 566



 Score = 52.4 bits (124), Expect(2) = 1e-27
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = +1

Query: 10  EIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMP 159
           E+K  ++RM+ G+A G D IP+E  K  G   + WLTKLFN+IF+  +MP
Sbjct: 456 EVKVALKRMKGGKAMGLDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMP 505


>gb|EMS45856.1| Cystathionine gamma-synthase, chloroplastic [Triticum urartu]
          Length = 723

 Score = 92.8 bits (229), Expect(2) = 1e-26
 Identities = 39/78 (50%), Positives = 57/78 (73%)
 Frame = +2

Query: 143 KRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISEN 322
           +  + P+EWR S ++P++KNKGD+ SC NYRGIKL+SH MK+WERV++ R+RR  S+++N
Sbjct: 394 RANKMPEEWRRSILVPIFKNKGDVQSCTNYRGIKLMSHIMKLWERVIEHRLRRMTSVTKN 453

Query: 323 QFGFMSGVRLQKPFILLG 376
           Q GFM      +   L+G
Sbjct: 454 QLGFMPRRSTMEAIFLIG 471



 Score = 53.1 bits (126), Expect(2) = 1e-26
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 10  EIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPK 162
           E+K  ++RM+  +  GPD IP+E  K  G   + WLTKLFN+IF+  +MP+
Sbjct: 350 EVKEALKRMKGSKVMGPDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPE 400


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  115 bits (289), Expect = 7e-24
 Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
 Frame = +2

Query: 140  LKRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISE 319
            L+  + P  WR ST++P+YK KG    C+NYRGIKLLSHTMK++ERV+  R+R   S+S+
Sbjct: 552  LRSSKMPAAWRLSTIVPIYKGKGSKYECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSK 611

Query: 320  NQFGFMSGVRLQKPFILLGGWWSSIGKE-----RETYI*F----SSTSRVLREILWICLE 472
            N +GF+ G+    P   L    ++I +E     R  Y+ F     +  RV R+ +W  L 
Sbjct: 612  NHYGFVQGLSTTDPMFAL----NTIAEEYREKLRPLYVAFLDMEKAFDRVPRDTIWWSLR 667

Query: 473  IRGIPVAYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
             + +P  Y   I DMY  A++ V+TV G ++   V  GLHQ
Sbjct: 668  KKNVPEHYVNVIIDMYRDARSMVRTVVGQTKPIAVAEGLHQ 708



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 38/143 (26%), Positives = 62/143 (43%)
 Frame = +1

Query: 10  EIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDS 189
           E K  + +M   +ATGPD IPVE  K     G+E LTKLFN + ++++MP    +     
Sbjct: 509 EFKMALEKMPNKKATGPDGIPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVP 568

Query: 190 SVXXXXXXXXXXXXXGYQAAKPHYESLGKGREDEGEKRCVYF*ESVWIHVGRSTTEAIHL 369
                          G +      +   +  +      C           G STT+ +  
Sbjct: 569 IYKGKGSKYECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFA 628

Query: 370 IRRLVEQYRERKRDLHMIFIDLE 438
           +  + E+YRE+ R L++ F+D+E
Sbjct: 629 LNTIAEEYREKLRPLYVAFLDME 651


>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 243

 Score =  114 bits (286), Expect = 2e-23
 Identities = 72/188 (38%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
 Frame = +2

Query: 47  VRPDLMRSQLNFERAQAGQVWSG*LSCLMSFLKRRECPKEWRWSTMIPLYKNKGDI*SCN 226
           V PD +  ++       G VW   L      +K ++   EWR ST+IP+YKNKGDI  C 
Sbjct: 35  VGPDNIPIEVWKSLGDRGIVWLTKL--FNEIMKTKKMLDEWRRSTLIPIYKNKGDIQHCA 92

Query: 227 NYRGIKLLSHTMKVWERV-----VKMRVRRGVSISENQFGFMSGVRLQKPFILLGGWWSS 391
           NYRGIKL+SHTMK+WERV     +  RV       +     +  + L+K +         
Sbjct: 93  NYRGIKLMSHTMKLWERVDYGSDLLRRVMERYRTDKKDLHLVF-IDLEKAY--------- 142

Query: 392 IGKERETYI*FSSTSRVLREILWICLEIRGIPVAYTRAIKDMYDGAKTRVQTVGGDSEHF 571
                          RV REILW  L+ +G+ +AY +AI+DMY+GA T V+T  GD+  F
Sbjct: 143 --------------DRVPREILWKALKKKGVRIAYIKAIQDMYEGASTCVRTQDGDTVDF 188

Query: 572 PVMMGLHQ 595
           P+ +GLHQ
Sbjct: 189 PITIGLHQ 196



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
 Frame = +1

Query: 10  EIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDS 189
           E+K  ++RM  G+A GPD IP+E  KS G  G+ WLTKLFN I KT    K+M  E+  S
Sbjct: 21  EVKEALKRMSNGKAVGPDNIPIEVWKSLGDRGIVWLTKLFNEIMKT----KKMLDEWRRS 76

Query: 190 SVXXXXXXXXXXXXXGYQAAKPHYESLGKGREDEGEK--RCVYF*ESVWIHVGRSTTEAI 363
           ++                   P Y++ G  +     +  + +     +W  V   +    
Sbjct: 77  TLI------------------PIYKNKGDIQHCANYRGIKLMSHTMKLWERVDYGS---- 114

Query: 364 HLIRRLVEQYRERKRDLHMIFIDLE 438
            L+RR++E+YR  K+DLH++FIDLE
Sbjct: 115 DLLRRVMERYRTDKKDLHLVFIDLE 139


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158 PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
           P +WR+S + P+YK +G +  C +YRG+K++SHTMK++ER++ +R+RR  ++SE Q+GF 
Sbjct: 42  PHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQ 101

Query: 338 SGV-RLQKPFILLGGWWSSIGKERETYI*FSSTSR----VLREILWICLEIRGIPVAYTR 502
            G   L   F +     +   K R  ++ F    +    V R+ +W  L  +GIP AY  
Sbjct: 102 PGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYID 161

Query: 503 AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            I+DMY  + + V+T  GD++ FP+ +GLHQ
Sbjct: 162 IIRDMYRDSVSMVRTAVGDTKPFPISVGLHQ 192



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 40/135 (29%), Positives = 59/135 (43%)
 Frame = +1

Query: 34  MRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDSSVXXXXXX 213
           M+  +A GPD+IP+E  KS G  G+  LT LFN +  T  MP +    Y           
Sbjct: 1   MKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSV 60

Query: 214 XXXXXXXGYQAAKPHYESLGKGREDEGEKRCVYF*ESVWIHVGRSTTEAIHLIRRLVEQY 393
                  G +      +   +  +    + C           G  T +AI  IR L+E Y
Sbjct: 61  QDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAY 120

Query: 394 RERKRDLHMIFIDLE 438
           RE++R LH+ F+DL+
Sbjct: 121 REKRRALHVAFLDLQ 135


>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 601

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158 PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
           P +WR+S + P+YK +G +  C +YRG+K++SHTMK++ER++ +R+RR  ++SE Q+GF 
Sbjct: 2   PHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQ 61

Query: 338 SGV-RLQKPFILLGGWWSSIGKERETYI*FSSTSR----VLREILWICLEIRGIPVAYTR 502
            G   L   F +     +   K R  ++ F    +    V R+ +W  L  +GIP AY  
Sbjct: 62  PGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYID 121

Query: 503 AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            I+DMY  + + V+T  GD++ FP+ +GLHQ
Sbjct: 122 IIRDMYRDSVSMVRTAVGDTKPFPISVGLHQ 152


>gb|EHJ70553.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 710

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158 PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
           P +WR+S + P+YK +G +  C +YRG+K++SHTMK++ER++ +R+RR  ++SE Q+GF 
Sbjct: 2   PHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQ 61

Query: 338 SGV-RLQKPFILLGGWWSSIGKERETYI*FSSTSR----VLREILWICLEIRGIPVAYTR 502
            G   L   F +     +   K R  ++ F    +    V R+ +W  L  +GIP AY  
Sbjct: 62  PGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYID 121

Query: 503 AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            I+DMY  + + V+T  GD++ FP+ +GLHQ
Sbjct: 122 IIRDMYRDSVSMVRTAVGDTKPFPISVGLHQ 152


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158  PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
            P +WR+S + P+YK +G +  C +YRG+K++SHTMK++ER++ +R+RR  ++SE Q+GF 
Sbjct: 823  PHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQ 882

Query: 338  SGV-RLQKPFILLGGWWSSIGKERETYI*FSSTSR----VLREILWICLEIRGIPVAYTR 502
             G   L   F +     +   K R  ++ F    +    V R+ +W  L  +GIP AY  
Sbjct: 883  PGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYID 942

Query: 503  AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
             I+DMY  + + V+T  GD++ FP+ +GLHQ
Sbjct: 943  IIRDMYRDSVSMVRTAVGDTKPFPISVGLHQ 973



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 43/144 (29%), Positives = 65/144 (45%)
 Frame = +1

Query: 7    EEIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYND 186
            +E +  +RRM+  +A GPD+IP+E  KS G  G+  LT LFN +  T  MP +    Y  
Sbjct: 773  DETRNCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYIT 832

Query: 187  SSVXXXXXXXXXXXXXGYQAAKPHYESLGKGREDEGEKRCVYF*ESVWIHVGRSTTEAIH 366
                            G +      +   +  +    + C           G  T +AI 
Sbjct: 833  PIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIF 892

Query: 367  LIRRLVEQYRERKRDLHMIFIDLE 438
             IR L+E YRE++R LH+ F+DL+
Sbjct: 893  AIRTLMEAYREKRRALHVAFLDLQ 916


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158  PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
            P +WR+S + P+YK +G +  C +YRG+K++SHTMK++ER++ +R+RR  ++SE Q+GF 
Sbjct: 555  PHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQ 614

Query: 338  SGV-RLQKPFILLGGWWSSIGKERETYI*FSSTSR----VLREILWICLEIRGIPVAYTR 502
             G   L   F +     +   K R  ++ F    +    V R+ +W  L  +GIP AY  
Sbjct: 615  PGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYID 674

Query: 503  AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
             I+DMY  + + V+T  GD++ FP+ +GLHQ
Sbjct: 675  IIRDMYRDSVSMVRTAVGDTKPFPISVGLHQ 705



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 43/144 (29%), Positives = 65/144 (45%)
 Frame = +1

Query: 7   EEIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYND 186
           +E +  +RRM+  +A GPD+IP+E  KS G  G+  LT LFN +  T  MP +    Y  
Sbjct: 505 DETRNCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYIT 564

Query: 187 SSVXXXXXXXXXXXXXGYQAAKPHYESLGKGREDEGEKRCVYF*ESVWIHVGRSTTEAIH 366
                           G +      +   +  +    + C           G  T +AI 
Sbjct: 565 PIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIF 624

Query: 367 LIRRLVEQYRERKRDLHMIFIDLE 438
            IR L+E YRE++R LH+ F+DL+
Sbjct: 625 AIRTLMEAYREKRRALHVAFLDLQ 648


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 1526

 Score =  112 bits (280), Expect = 8e-23
 Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158  PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
            P  WR ST++P++K KGD   C+NYRGI+L +HTMK++ER+V  R+R  V ISE QFGFM
Sbjct: 584  PDAWRRSTIVPIFKQKGDAMDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFM 643

Query: 338  SG-VRLQKPFILLGGWWSSIGKERETYI*F----SSTSRVLREILWICLEIRGIPVAYTR 502
             G       FI          K R  YI F     +  R+ R++LW  L  R +P     
Sbjct: 644  PGRSTTDAIFITRQVMGKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLIS 703

Query: 503  AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
             +KDMYDG+ T ++T  G +    V +G+HQ
Sbjct: 704  LVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQ 734



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
 Frame = +1

Query: 10  EIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYNDS 189
           E++  + +M+ G+ATGPD +P++  K+ G  G++WLT+  N +    R+P   +     +
Sbjct: 535 EVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWLTRFLNTVTAKGRIP---DAWRRST 591

Query: 190 SVXXXXXXXXXXXXXGYQAAK--PHYESLGKGREDEGEKRCVYF*ESVW-IHVGRSTTEA 360
            V              Y+  +   H   L +   D   +  V   E  +    GRSTT+A
Sbjct: 592 IVPIFKQKGDAMDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDA 651

Query: 361 IHLIRRLVEQYRERKRDLHMIFIDLE 438
           I + R+++ +YRE++R  ++ F+DLE
Sbjct: 652 IFITRQVMGKYREKRRPCYIAFLDLE 677


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  112 bits (280), Expect = 8e-23
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 5/157 (3%)
 Frame = +2

Query: 140  LKRRECPKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISE 319
            L   + P +WR S + P+YK +G +  C +YRGIKL+SHTMK++ER++ +R+RR  ++SE
Sbjct: 550  LNTGKMPHQWRLSFITPIYKGRGSVQDCGSYRGIKLMSHTMKLFERMIDLRLRRECTVSE 609

Query: 320  NQFGFMSGVRLQKPFILLGGWWSSI-GKERETYI*FSSTSR----VLREILWICLEIRGI 484
            +Q+GF  G         L     +   K R  ++ F    +    V R+ +W  L  +GI
Sbjct: 610  SQYGFQPGSGTMDAIFALRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRSKGI 669

Query: 485  PVAYTRAIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            P AY   I+ MY  + + V+T  GD+  FP+ +G+HQ
Sbjct: 670  PEAYIEIIRGMYHDSASMVRTAVGDTRPFPITVGVHQ 706



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/145 (29%), Positives = 69/145 (47%)
 Frame = +1

Query: 4   VEEIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYN 183
           ++E +  +RRM+ G+A GPD+IP+E  KS G  G+  LT LFN I  T +MP +  + + 
Sbjct: 505 LDETRNCLRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNHILNTGKMPHQWRLSFI 564

Query: 184 DSSVXXXXXXXXXXXXXGYQAAKPHYESLGKGREDEGEKRCVYF*ESVWIHVGRSTTEAI 363
                            G +      +   +  +    + C           G  T +AI
Sbjct: 565 TPIYKGRGSVQDCGSYRGIKLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAI 624

Query: 364 HLIRRLVEQYRERKRDLHMIFIDLE 438
             +R L+E YRE++R LH+ F+DL+
Sbjct: 625 FALRTLMEAYREKRRALHVAFLDLQ 649


>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA
           polymerase (reverse transcriptase) domain containing
           protein [Haemonchus contortus]
          Length = 816

 Score =  111 bits (277), Expect = 2e-22
 Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 5/151 (3%)
 Frame = +2

Query: 158 PKEWRWSTMIPLYKNKGDI*SCNNYRGIKLLSHTMKVWERVVKMRVRRGVSISENQFGFM 337
           P  WR ST++P++K KGD   C+NYRGI+L +HTMK++ER+V  R+R  V ISE QFGFM
Sbjct: 521 PDAWRRSTIVPIFKQKGDAMDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFM 580

Query: 338 -SGVRLQKPFILLGGWWSSIGKERETYI*F----SSTSRVLREILWICLEIRGIPVAYTR 502
                    FI          K R  Y+ F     +  R+ RE+LW  L  R +P     
Sbjct: 581 PERSTTDAIFIARQIMEKYREKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLIS 640

Query: 503 AIKDMYDGAKTRVQTVGGDSEHFPVMMGLHQ 595
            +KDMYDG+ T ++T  G +    V +G+HQ
Sbjct: 641 LVKDMYDGSTTTIRTAHGQTGAIDVTVGVHQ 671



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
 Frame = +1

Query: 7   EEIKGDVRRMRRGRATGPDEIPVEF*KSAGRAGLEWLTKLFNVIFKTARMPKRMEVEYND 186
           +E++  + +M+ G+ATGPD +P+E  K+ G  G++WLT+  N +    R+P   +     
Sbjct: 471 DEVRKAIGKMKVGKATGPDGVPIEAWKALGEHGIKWLTRFLNTVTAEGRIP---DAWRRS 527

Query: 187 SSVXXXXXXXXXXXXXGYQAAK--PHYESLGKGREDEGEKRCVYF*ESVW-IHVGRSTTE 357
           + V              Y+  +   H   L +   D   +  V   E  +     RSTT+
Sbjct: 528 TIVPIFKQKGDAMDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTD 587

Query: 358 AIHLIRRLVEQYRERKRDLHMIFIDLE 438
           AI + R+++E+YRE++R  ++ F+DLE
Sbjct: 588 AIFIARQIMEKYREKRRPCYLAFLDLE 614