BLASTX nr result
ID: Atropa21_contig00014288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00014288 (594 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004231311.1| PREDICTED: uncharacterized protein LOC101252... 103 3e-20 dbj|BAO49719.1| nuclear pore complex protein Nup160a [Nicotiana ... 102 8e-20 ref|XP_006358491.1| PREDICTED: uncharacterized protein LOC102596... 98 1e-18 ref|XP_006358490.1| PREDICTED: uncharacterized protein LOC102596... 98 1e-18 >ref|XP_004231311.1| PREDICTED: uncharacterized protein LOC101252933 [Solanum lycopersicum] Length = 1282 Score = 103 bits (258), Expect = 3e-20 Identities = 50/58 (86%), Positives = 56/58 (96%) Frame = +3 Query: 420 GSNFVRIWVGNDHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPSTK 593 GS FVRI VGNDHNNPDAIP+AVLQK+DSEVGTAVISL++L++STGDRINLLLDPSTK Sbjct: 63 GSTFVRICVGNDHNNPDAIPMAVLQKNDSEVGTAVISLYNLHLSTGDRINLLLDPSTK 120 >dbj|BAO49719.1| nuclear pore complex protein Nup160a [Nicotiana benthamiana] Length = 1486 Score = 102 bits (254), Expect = 8e-20 Identities = 49/58 (84%), Positives = 54/58 (93%) Frame = +3 Query: 420 GSNFVRIWVGNDHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPSTK 593 GS+ VRIWVGNDHNN D IPLAVL+KDDSEVGTA+ISL+SLY S+GDRINLLLDPSTK Sbjct: 266 GSSSVRIWVGNDHNNSDVIPLAVLRKDDSEVGTAMISLYSLYFSSGDRINLLLDPSTK 323 >ref|XP_006358491.1| PREDICTED: uncharacterized protein LOC102596358 isoform X2 [Solanum tuberosum] Length = 1490 Score = 98.2 bits (243), Expect = 1e-18 Identities = 51/61 (83%), Positives = 54/61 (88%), Gaps = 3/61 (4%) Frame = +3 Query: 420 GSNFVRIWVGN---DHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPST 590 GS FVRI VGN DHNNPDAI +AVLQKD+SEVGTAVISL+SLY STGDRINLLLDPST Sbjct: 270 GSTFVRICVGNESNDHNNPDAITMAVLQKDESEVGTAVISLYSLYFSTGDRINLLLDPST 329 Query: 591 K 593 K Sbjct: 330 K 330 >ref|XP_006358490.1| PREDICTED: uncharacterized protein LOC102596358 isoform X1 [Solanum tuberosum] Length = 1492 Score = 98.2 bits (243), Expect = 1e-18 Identities = 51/61 (83%), Positives = 54/61 (88%), Gaps = 3/61 (4%) Frame = +3 Query: 420 GSNFVRIWVGN---DHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPST 590 GS FVRI VGN DHNNPDAI +AVLQKD+SEVGTAVISL+SLY STGDRINLLLDPST Sbjct: 270 GSTFVRICVGNESNDHNNPDAITMAVLQKDESEVGTAVISLYSLYFSTGDRINLLLDPST 329 Query: 591 K 593 K Sbjct: 330 K 330