BLASTX nr result

ID: Atropa21_contig00014288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014288
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231311.1| PREDICTED: uncharacterized protein LOC101252...   103   3e-20
dbj|BAO49719.1| nuclear pore complex protein Nup160a [Nicotiana ...   102   8e-20
ref|XP_006358491.1| PREDICTED: uncharacterized protein LOC102596...    98   1e-18
ref|XP_006358490.1| PREDICTED: uncharacterized protein LOC102596...    98   1e-18

>ref|XP_004231311.1| PREDICTED: uncharacterized protein LOC101252933 [Solanum
           lycopersicum]
          Length = 1282

 Score =  103 bits (258), Expect = 3e-20
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = +3

Query: 420 GSNFVRIWVGNDHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPSTK 593
           GS FVRI VGNDHNNPDAIP+AVLQK+DSEVGTAVISL++L++STGDRINLLLDPSTK
Sbjct: 63  GSTFVRICVGNDHNNPDAIPMAVLQKNDSEVGTAVISLYNLHLSTGDRINLLLDPSTK 120


>dbj|BAO49719.1| nuclear pore complex protein Nup160a [Nicotiana benthamiana]
          Length = 1486

 Score =  102 bits (254), Expect = 8e-20
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = +3

Query: 420 GSNFVRIWVGNDHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPSTK 593
           GS+ VRIWVGNDHNN D IPLAVL+KDDSEVGTA+ISL+SLY S+GDRINLLLDPSTK
Sbjct: 266 GSSSVRIWVGNDHNNSDVIPLAVLRKDDSEVGTAMISLYSLYFSSGDRINLLLDPSTK 323


>ref|XP_006358491.1| PREDICTED: uncharacterized protein LOC102596358 isoform X2 [Solanum
           tuberosum]
          Length = 1490

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 51/61 (83%), Positives = 54/61 (88%), Gaps = 3/61 (4%)
 Frame = +3

Query: 420 GSNFVRIWVGN---DHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPST 590
           GS FVRI VGN   DHNNPDAI +AVLQKD+SEVGTAVISL+SLY STGDRINLLLDPST
Sbjct: 270 GSTFVRICVGNESNDHNNPDAITMAVLQKDESEVGTAVISLYSLYFSTGDRINLLLDPST 329

Query: 591 K 593
           K
Sbjct: 330 K 330


>ref|XP_006358490.1| PREDICTED: uncharacterized protein LOC102596358 isoform X1 [Solanum
           tuberosum]
          Length = 1492

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 51/61 (83%), Positives = 54/61 (88%), Gaps = 3/61 (4%)
 Frame = +3

Query: 420 GSNFVRIWVGN---DHNNPDAIPLAVLQKDDSEVGTAVISLHSLYISTGDRINLLLDPST 590
           GS FVRI VGN   DHNNPDAI +AVLQKD+SEVGTAVISL+SLY STGDRINLLLDPST
Sbjct: 270 GSTFVRICVGNESNDHNNPDAITMAVLQKDESEVGTAVISLYSLYFSTGDRINLLLDPST 329

Query: 591 K 593
           K
Sbjct: 330 K 330


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