BLASTX nr result

ID: Atropa21_contig00014267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014267
         (758 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...    74   5e-11

>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 47/107 (43%), Positives = 49/107 (45%)
 Frame = -3

Query: 648  PDSETMDVTDSYXXXXXXXXXXXXXXXXXXXXHSSNDEVTSDKDEKGXXXXXXXXXXXXX 469
            PDS TMDVTD Y                    HSSNDE+TS+KDEK              
Sbjct: 896  PDSMTMDVTDIYEHKEERKREKDKERKHRKRHHSSNDELTSEKDEKEESERDKERKHRKH 955

Query: 468  XHSSNDEVASDRDXXXXXXXXXXXXXXXXXXXKHAHSPESDGESRHK 328
              SSNDEV SDRD                   KHAHSPESDGESRHK
Sbjct: 956  HQSSNDEVTSDRDEKEEFRKSHRHSSDRKKSKKHAHSPESDGESRHK 1002


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