BLASTX nr result

ID: Atropa21_contig00014230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014230
         (618 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39932.2| NB-ARC domain containing protein [Solanum demissu...   134   2e-29
gb|AAT40519.2| hypothetical protein SDM1_22t00007 [Solanum demis...   132   8e-29
ref|XP_006340584.1| PREDICTED: putative F-box/LRR-repeat protein...    72   1e-10
ref|XP_004252040.1| PREDICTED: serine/threonine-protein phosphat...    70   4e-10
ref|XP_006357317.1| PREDICTED: ABC transporter I family member 6...    57   4e-06

>gb|AAT39932.2| NB-ARC domain containing protein [Solanum demissum]
           gi|113205207|gb|AAT39950.2| NB-ARC domain containing
           protein [Solanum demissum]
          Length = 884

 Score =  134 bits (337), Expect = 2e-29
 Identities = 72/129 (55%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
 Frame = +1

Query: 28  SPP--RSKLSPQEPVFVPSTKSLAITTKDMGVLAKSHKPEVVVSGLNSTTTYEIDLGDDM 201
           SPP   SKLSP+ PVFVP             VLA+ ++   +VS         IDLG+D 
Sbjct: 236 SPPALNSKLSPEAPVFVPKC-----------VLARKNESSALVSNT-------IDLGEDS 277

Query: 202 FDGNDEYNMLDICFDKVAKDEDLSPRQQRSGSNKSKKKIHGRQHSWDGKVTEEFVPRHLS 381
            D +++ NMLDICFD+VA+  D+SPRQQRSGSNKSKKK +GRQHSWDGK+TEEFVPRHL 
Sbjct: 278 LDEDEKDNMLDICFDRVARKGDISPRQQRSGSNKSKKKTYGRQHSWDGKMTEEFVPRHLL 337

Query: 382 M*PAKKNHM 408
           M   K+NH+
Sbjct: 338 MRQTKQNHL 346


>gb|AAT40519.2| hypothetical protein SDM1_22t00007 [Solanum demissum]
          Length = 937

 Score =  132 bits (332), Expect = 8e-29
 Identities = 72/129 (55%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
 Frame = +1

Query: 28  SPP--RSKLSPQEPVFVPSTKSLAITTKDMGVLAKSHKPEVVVSGLNSTTTYEIDLGDDM 201
           SPP   SKLS + PVFVP             VLA+ ++   +VS  N       DLG+D 
Sbjct: 354 SPPTLNSKLSLEAPVFVPKC-----------VLARKNESIALVSNTN-------DLGEDS 395

Query: 202 FDGNDEYNMLDICFDKVAKDEDLSPRQQRSGSNKSKKKIHGRQHSWDGKVTEEFVPRHLS 381
            D ++E NMLDICFD+VA++ D+SPRQQRSGSNKSKKK +GRQHSWDGK+TEEFVPRHL 
Sbjct: 396 LDEDEEDNMLDICFDRVAREGDISPRQQRSGSNKSKKKTYGRQHSWDGKMTEEFVPRHLL 455

Query: 382 M*PAKKNHM 408
           +  AK+NH+
Sbjct: 456 IQHAKQNHL 464


>ref|XP_006340584.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like
           [Solanum tuberosum]
          Length = 573

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 36/65 (55%), Positives = 47/65 (72%)
 Frame = +1

Query: 142 VVVSGLNSTTTYEIDLGDDMFDGNDEYNMLDICFDKVAKDEDLSPRQQRSGSNKSKKKIH 321
           + +     T  ++IDL +DM DG D+Y+MLDI FDK+AK+EDLS RQQRSGSNK K+   
Sbjct: 511 MTIDNFKKTFGHDIDLENDMADGEDKYDMLDIYFDKLAKEEDLSTRQQRSGSNKKKRL-- 568

Query: 322 GRQHS 336
            R+HS
Sbjct: 569 EREHS 573


>ref|XP_004252040.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Solanum lycopersicum]
          Length = 909

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 30/45 (66%), Positives = 40/45 (88%)
 Frame = +1

Query: 181 IDLGDDMFDGNDEYNMLDICFDKVAKDEDLSPRQQRSGSNKSKKK 315
           +D G++ FD ++E NMLDICFD+VA++ D+SPRQQRSGSNKSKK+
Sbjct: 863 VDFGEESFDDDEEDNMLDICFDRVAREGDISPRQQRSGSNKSKKE 907


>ref|XP_006357317.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Solanum tuberosum]
          Length = 435

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 36/79 (45%), Positives = 45/79 (56%)
 Frame = +1

Query: 76  STKSLAITTKDMGVLAKSHKPEVVVSGLNSTTTYEIDLGDDMFDGNDEYNMLDICFDKVA 255
           S K L ITTK   VL KSH+PE  VS L+ TTTY+ DLG + FD +DE  ML        
Sbjct: 8   SKKILTITTK---VLEKSHEPEAGVSRLSPTTTYDSDLGSEKFDEDDEDEML-------G 57

Query: 256 KDEDLSPRQQRSGSNKSKK 312
            + DLSP   +   +K K+
Sbjct: 58  NNGDLSPSPTKPNHDKPKE 76


Top