BLASTX nr result

ID: Atropa21_contig00014175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014175
         (652 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605...    77   4e-12
ref|XP_006366616.1| PREDICTED: uncharacterized protein LOC102598...    75   2e-11
ref|XP_006342323.1| PREDICTED: putative ribonuclease H protein A...    73   8e-11

>ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605115 [Solanum tuberosum]
          Length = 201

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 40/76 (52%), Positives = 53/76 (69%)
 Frame = -2

Query: 300 FILGIMDDIIKRTKGKTRTVQIFKMVYTEFVHCL*IKRNMHIF*KIARDYPSIAREIAYI 121
           ++LGI+D      KGKT T QIFK+VYTE+V+ + I+RN  IF K +R + S+AREIAYI
Sbjct: 128 YVLGIID----AAKGKTPTAQIFKLVYTEYVYAIWIERNHRIFEKDSRTWESLAREIAYI 183

Query: 120 CCVRALSELAQSCLNF 73
           CCVRA  +  Q+   F
Sbjct: 184 CCVRASQKTMQAIHQF 199


>ref|XP_006366616.1| PREDICTED: uncharacterized protein LOC102598485 [Solanum tuberosum]
          Length = 189

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = -2

Query: 300 FILGIMDDIIKRTKGKTRTVQIFKMVYTEFVHCL*IKRNMHIF*KIARDYPSIAREIAYI 121
           ++LGI+D      KGKT T QIFK+VYTE+V+ + I+RN  IF K +R + S+AREIAYI
Sbjct: 128 YVLGIID----AAKGKTPTAQIFKLVYTEYVYAIWIERNHRIFEKDSRTWESLAREIAYI 183

Query: 120 CCVRA 106
           CCVRA
Sbjct: 184 CCVRA 188


>ref|XP_006342323.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 170

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = -2

Query: 300 FILGIMDDIIKRTKGKTRTVQIFKMVYTEFVHCL*IKRNMHIF*KIARDYPSIAREIAYI 121
           ++LGI+D      KGKT T QIFK+VY E+V+ + I+RN  IF K +R + S+AREIAYI
Sbjct: 97  YVLGIID----AAKGKTPTAQIFKLVYIEYVYAIWIERNHRIFEKDSRIWESLAREIAYI 152

Query: 120 CCVRALSELAQ 88
           CCVRA  +  Q
Sbjct: 153 CCVRASQKTMQ 163


Top