BLASTX nr result
ID: Atropa21_contig00014093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00014093
(2813 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 211 e-108
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 154 e-107
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 202 4e-95
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 152 4e-94
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 171 4e-92
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 154 4e-92
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He... 136 9e-90
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 129 3e-89
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 129 3e-89
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 169 9e-86
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 224 2e-84
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 161 5e-83
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 168 3e-79
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic... 145 2e-78
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 129 3e-77
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan... 129 3e-77
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta... 126 3e-74
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 166 2e-69
gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu] 147 2e-69
emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcripta... 133 2e-69
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 211 bits (537), Expect(3) = e-108
Identities = 100/141 (70%), Positives = 112/141 (79%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
SGVLCDK + P+LK KFY+VVVRP +LY E WPVK + KM VAEMRMLRWMCGHTR
Sbjct: 537 SGVLCDKKISPKLKGKFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRS 596
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D I+NEVIR KVGVA VVDK+R+ RLRWF HV+RR ADAPVRRCE + V G RRG GRPK
Sbjct: 597 DKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPK 656
Query: 2037 KSWVEVIRQDMAQLQLIEDMT 2099
K W EVIRQD+A L + EDMT
Sbjct: 657 KYWEEVIRQDLAMLHITEDMT 677
Score = 198 bits (504), Expect(3) = e-108
Identities = 93/135 (68%), Positives = 111/135 (82%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
V + LHQGS LSPFLFAL +D L IQ VPWCMLFADDIVL DET++ V+ +LEVWRQ
Sbjct: 401 VEIGLHQGSVLSPFLFALVMDELTRSIQETVPWCMLFADDIVLIDETRDRVNARLEVWRQ 460
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LESKGF+LSRTK++YL CKFS G+ TD +VRL QVIPKKESF+YLG++IQG+G+IDD
Sbjct: 461 TLESKGFRLSRTKTEYLGCKFSDGLDETDVEVRLAAQVIPKKESFRYLGAVIQGSGDIDD 520
Query: 1630 DVAHRIGKGWMKWKL 1674
DV HR+G WMKW+L
Sbjct: 521 DVTHRVGAAWMKWRL 535
Score = 34.3 bits (77), Expect(3) = e-108
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 1208 KVMYDGAKT*VRSIGGGSEH 1267
K MYDGAKT VR++GG SEH
Sbjct: 379 KDMYDGAKTRVRTVGGDSEH 398
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 154 bits (390), Expect(3) = e-107
Identities = 96/259 (37%), Positives = 148/259 (57%), Gaps = 28/259 (10%)
Frame = +2
Query: 572 DEKCKILVEDTQIRRR*QTYFHKLLN*EGDRNIV-LGELEHSESSRDFGYCRRVKVDEVE 748
D+ ++L ++ +I R ++YF++L N EG + + LG L E ++F Y RR++ EV+
Sbjct: 2 DKDGEVLAQEEKINERWKSYFYELFN-EGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVK 60
Query: 749 WLCAR*AGAERSDQIKSR*NFRRMWAEDVRDA*GVEMEQDD------------------- 871
E +Q+K N R + +++ ++ + D
Sbjct: 61 ---------EALNQMK---NDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPG 108
Query: 872 --------SVVQVQGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLG 1027
+ + +G+IQ+C NY GIKL++HT K+WERV+E + ++ NQF F G
Sbjct: 109 EWRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSG 168
Query: 1028 RSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVI 1207
RSIT+AIYL+RR++E+YR KR LHM+FIDLEK YD+V REVL + ++ V + YIR I
Sbjct: 169 RSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAI 228
Query: 1208 KVMYDGAKT*VRSIGGGSE 1264
K MYDGA T V++ GG +E
Sbjct: 229 KDMYDGATTSVKTQGGVTE 247
Score = 149 bits (376), Expect(3) = e-107
Identities = 68/130 (52%), Positives = 95/130 (73%)
Frame = +1
Query: 1282 LHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQVLES 1461
LHQGS+LSP+LF + ++ L HIQ VPWC+LFADDIVL E + ++ KLE+W++ LE
Sbjct: 255 LHQGSSLSPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEV 314
Query: 1462 KGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDDDVAH 1641
G ++SR+K++Y+ECKFS + T+ +V + ++ K +SFKYLG IIQ NGEI+ DV H
Sbjct: 315 YGLRISRSKTEYMECKFSLRRENTNIEVEIGENILRKVKSFKYLGCIIQDNGEIEQDVNH 374
Query: 1642 RIGKGWMKWK 1671
RI GW KW+
Sbjct: 375 RIQAGWSKWR 384
Score = 137 bits (344), Expect(3) = e-107
Identities = 66/130 (50%), Positives = 87/130 (66%)
Frame = +3
Query: 1653 GLDEMEALSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLR 1832
G + + SG +CDK VP +LK KFY+ +RP MLY E K + K+ VAE++MLR
Sbjct: 379 GWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEVKMLR 438
Query: 1833 WMCGHTRRDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGL 2012
WM GHTR D I+NE IR +VGVAP+V+K+ + RLRWF HVRRR + PVRR + +
Sbjct: 439 WMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVDEMEDGQR 498
Query: 2013 RRGTGRPKKS 2042
+G GRPKK+
Sbjct: 499 AKGRGRPKKT 508
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 202 bits (513), Expect(2) = 4e-95
Identities = 114/284 (40%), Positives = 168/284 (59%), Gaps = 21/284 (7%)
Frame = +2
Query: 476 RAGEKDGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN*E 655
R K+GE +Y+L + RE+K R LNQV+CIKDE K+L + ++ + + YFH L N
Sbjct: 80 RLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHNLFNEG 139
Query: 656 GDRNIVLGELEHSESSRDFGYCRRVKVDEVE---------------------WLCAR*AG 772
+R+ LGEL +SE R++ + RR++ +EV W G
Sbjct: 140 HERSASLGELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPIEVWKVLGETG 199
Query: 773 AERSDQIKSR*NFRRMWAEDVRDA*GVEMEQDDSVVQVQGNIQNCNNYMGIKLLSHTKKV 952
+ +R + + R + V + ++ +G++QNC NY GIKL+SHT K+
Sbjct: 200 ITWLIDLFNRILKTKKMPNEWRTSPLVPIYKN------KGDVQNCMNYRGIKLMSHTMKL 253
Query: 953 WERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKIY 1132
WERV+E R+ +S NQF F GRS +AIYL+RRL+E+YR+ K+ LHM+FIDLEK Y
Sbjct: 254 WERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAY 313
Query: 1133 DKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRSIGGGSE 1264
D+V R+++ R ++ KGV V YI+ IK MY+GAKT VR+ G +E
Sbjct: 314 DRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTE 357
Score = 176 bits (446), Expect(2) = 4e-95
Identities = 85/153 (55%), Positives = 108/153 (70%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGS+LSP+LFAL +D L HIQ ++PWCMLFA DIVL DETQ GV+ KL +WR+
Sbjct: 361 ITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWRE 420
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
VLESKG LSR+K++Y+ECKFS + VR+ Q IPK + F+YLGSI+Q NGE+D+
Sbjct: 421 VLESKGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDE 480
Query: 1630 DVAHRIGKGWMKWKLYQVCCAIRMCRLDLRKSF 1728
D+ HRI GWMKWK R L L+ F
Sbjct: 481 DLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKF 513
Score = 113 bits (282), Expect = 5e-22
Identities = 62/150 (41%), Positives = 85/150 (56%)
Frame = +3
Query: 1653 GLDEMEALSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLR 1832
G + ++ SGVLCD+ +P +LK KFY+ +RP ML
Sbjct: 489 GWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAML------------------------- 523
Query: 1833 WMCGHTRRDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGL 2012
+D I+NE IR KVGVA + KMR+ LRWF HV+RR DAP+RRC+ T V
Sbjct: 524 -------KDKIRNEDIRGKVGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRCDYGTKVQG 576
Query: 2013 RRGTGRPKKSWVEVIRQDMAQLQLIEDMTE 2102
R+G GRP+K+ E +R+D+ L L+EDMT+
Sbjct: 577 RKGRGRPRKTLEETLRKDLEYLDLMEDMTQ 606
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 152 bits (385), Expect(3) = 4e-94
Identities = 70/130 (53%), Positives = 97/130 (74%)
Frame = +1
Query: 1282 LHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQVLES 1461
LHQGS+LSP+LF L ++ L HIQ VPWCMLFADDIVL E++ ++ KLE+WR+ LE
Sbjct: 1113 LHQGSSLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEV 1172
Query: 1462 KGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDDDVAH 1641
G ++SR+K++Y+ECKFS + ++ +V++ ++ K +SFKYLG IIQ NGEI+ DV H
Sbjct: 1173 YGLRISRSKTEYMECKFSLRRENSNIEVKIGENILRKVKSFKYLGCIIQDNGEIEQDVNH 1232
Query: 1642 RIGKGWMKWK 1671
RI GW KW+
Sbjct: 1233 RIQAGWSKWR 1242
Score = 147 bits (370), Expect(3) = 4e-94
Identities = 71/148 (47%), Positives = 97/148 (65%)
Frame = +3
Query: 1653 GLDEMEALSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLR 1832
G + + SG +CDK VP +LK KFY+ +RP MLY E W K + K+ VAEM+MLR
Sbjct: 1237 GWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECWAAKGEHEHKLSVAEMKMLR 1296
Query: 1833 WMCGHTRRDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGL 2012
WM GHTR D I+NE IR +VGVAP+V+KM + RLRWF HV RR + VRR + +
Sbjct: 1297 WMSGHTRLDKIRNEDIRERVGVAPIVEKMVESRLRWFGHVGRRPIEHLVRRVDEMEDGQK 1356
Query: 2013 RRGTGRPKKSWVEVIRQDMAQLQLIEDM 2096
+G GRPKK+ EV+++D+ + + I +
Sbjct: 1357 AKGRGRPKKTIHEVVKRDLHETEAIHSI 1384
Score = 96.7 bits (239), Expect(3) = 4e-94
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Frame = +2
Query: 488 KDGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN*EGDRN 667
K+GEK +YR+ K RER+ R L+QVKCIKD+ ++L ++ +I R ++YF++L N EG +
Sbjct: 879 KEGEKGIYRIAKSRERRTRDLDQVKCIKDKDREVLAQEEKINERWKSYFYELFN-EGQKT 937
Query: 668 I-VLGELEHSESSRDFGYCRRVKVDEVEWLC--AR*AGAERSDQI----------KSR*N 808
+ LG L E ++F Y RR++ EV+ + A D I K
Sbjct: 938 LPSLGRLCTREEDQNFNYYRRIRDFEVKEALKQMKNGRAVGPDNIPIEVWKGLGGKGINW 997
Query: 809 FRRMWAEDVRDA*GVEMEQDDSVV---QVQGNIQNCNNYMGIKLLSHTKKVWERVVEARM 979
+++ E +R + + ++V +++G+IQ+C NY GIKL+SHT K+W +
Sbjct: 998 LTKLFYEILRSKKMPDEWRKSTLVPIYRIKGDIQSCGNYRGIKLMSHTMKLWGK------ 1051
Query: 980 GMIVSISVNQFRFTLGRSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKIYDKVLREVL* 1159
G + R+ GR + K + E++R
Sbjct: 1052 GDRTEVEKRDTRYQ-GRFLWKVL-----------EKRR---------------------- 1077
Query: 1160 RCMKAKGVLVVYIRVIKVMYDGAKT*VRSIGGGSE 1264
V + YIR IK MY+GA T V++ GG +E
Sbjct: 1078 -------VRIAYIRAIKDMYEGATTSVKTQGGVTE 1105
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 171 bits (433), Expect(3) = 4e-92
Identities = 77/135 (57%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSP+LF L +D + IQ ++PWCMLFADD+VL D+++ GV+ KLE+WRQ
Sbjct: 275 IKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 334
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGI-QVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEID 1626
+LESKGF+LSRTK++Y++C FS + +E+V LD QV+P+K++F+YLGS++Q +G+ID
Sbjct: 335 ILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDID 394
Query: 1627 DDVAHRIGKGWMKWK 1671
+DV HRI GWMKW+
Sbjct: 395 EDVNHRIKAGWMKWR 409
Score = 157 bits (398), Expect(3) = 4e-92
Identities = 68/140 (48%), Positives = 99/140 (70%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
SG+LCDK VP +LK KFY+ +RP +LY E WP K+ + Q++ VAEMRMLRWMCGHTRR
Sbjct: 412 SGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRR 471
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D ++N+ IR++VGVAP+ +K+ + RLRWF H++RR DAPV ++RG GRP
Sbjct: 472 DRVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLKRAGNVKRGRGRPN 531
Query: 2037 KSWVEVIRQDMAQLQLIEDM 2096
+W E +++D+ + +++
Sbjct: 532 LTWEESVKRDLKGWNITKEL 551
Score = 60.8 bits (146), Expect(3) = 4e-92
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +2
Query: 1034 ITKAIYLVRRL--VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVI 1207
I++ I+++ + +E+Y+E+K+ LHM+FIDLEK YDK+ R V+ ++ V YI +I
Sbjct: 193 ISELIFMLDKAGDLERYKEQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLI 252
Query: 1208 KVMYDGAKT*VRSIGGGSE 1264
K MYD T VR+ G ++
Sbjct: 253 KDMYDNVVTSVRTSDGDTD 271
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 154 bits (389), Expect(3) = 4e-92
Identities = 75/131 (57%), Positives = 95/131 (72%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
SGVLCD VP +LK KFY+ VRPT+LY E W VK + K+ VAEMRMLRWMCG TR+
Sbjct: 221 SGVLCDAKVPIKLKGKFYRTAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQ 280
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D I+NE IR +VGVAP+V+KM + RLRWF HV RR D+ +RR +++ RG GRPK
Sbjct: 281 DKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQMERRQTIRGRGRPK 340
Query: 2037 KSWVEVIRQDM 2069
K+ EVI++D+
Sbjct: 341 KTIREVIKKDL 351
Score = 146 bits (369), Expect(3) = 4e-92
Identities = 69/134 (51%), Positives = 98/134 (73%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGS LSP+LF L +D L IQ P CMLFADDIVL E++ ++ +LE WR+
Sbjct: 86 ITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCMLFADDIVLLGESREELNERLETWRR 145
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ GF+LSR+KS+Y+EC+F+ +V++ +V++ +IP+ FKYLGS+IQ +GEI+
Sbjct: 146 ALETHGFRLSRSKSEYMECQFNKR-RVSNSEVKIGDHIIPQVTRFKYLGSVIQDDGEIEG 204
Query: 1630 DVAHRIGKGWMKWK 1671
DV HRI GWMKW+
Sbjct: 205 DVNHRIQAGWMKWR 218
Score = 89.0 bits (219), Expect(3) = 4e-92
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +2
Query: 1025 GRSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRV 1204
GRS +AIYL+RR++EQYR ++ LH++FIDLEK YD+V RE+L + ++ KGV V YIR
Sbjct: 3 GRSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYIRA 62
Query: 1205 IKVMYDGAKT*VRSIGGGSE 1264
I+ MYD T VR+ GG S+
Sbjct: 63 IQDMYDRVSTSVRTQGGESD 82
>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
Length = 990
Score = 136 bits (343), Expect(4) = 9e-90
Identities = 63/132 (47%), Positives = 88/132 (66%)
Frame = +3
Query: 1674 LSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTR 1853
++GV+CD+ +PP+LK Y+ +VRP +LY E WP + Q++ V EM+MLRWMCG TR
Sbjct: 830 VTGVVCDRRIPPKLKGLIYKSIVRPVLLYGSECWPALSRHTQELHVTEMKMLRWMCGVTR 889
Query: 1854 RDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRP 2033
D I+N IR +GV V DK+++ RLRWF HV RR + R+C + V G R GRP
Sbjct: 890 SDRIRNTFIRGSLGVRDVADKLQERRLRWFGHVTRRPKNYVGRKCLAILVPG-ARPPGRP 948
Query: 2034 KKSWVEVIRQDM 2069
+K W++V+ QDM
Sbjct: 949 RKRWLDVVMQDM 960
Score = 114 bits (285), Expect(4) = 9e-90
Identities = 71/282 (25%), Positives = 144/282 (51%), Gaps = 27/282 (9%)
Frame = +2
Query: 491 DGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN*EGDRNI 670
+G+K +Y+L + R++ + + + C++D + +L ++ R ++YF +LLN + ++
Sbjct: 430 EGQKLIYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQHPCSL 489
Query: 671 VLGELEHSESSRDFGYCRRVKVDEVEWLCAR*AGAERSDQIKSR*NFRRMWAEDVR---- 838
H + + G + +DE + ++ N + + +D+
Sbjct: 490 ------HHDPPPNLGLIAPITLDETR------------NCLRRMKNGKAVGPDDIPIEAW 531
Query: 839 ---DA*GVEMEQD--------------------DSVVQVQGNIQNCNNYMGIKLLSHTKK 949
+ GV M D + + +G++Q+C +Y GIKL+SHT K
Sbjct: 532 KSLGSLGVLMLTDLFNHILNTGKMPHQWRLSFITPIYKGRGSVQDCGSYRGIKLMSHTMK 591
Query: 950 VWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKI 1129
++ER+++ R+ ++S +Q+ F G AI+ +R L+E YRE++R+LH+ F+DL+K
Sbjct: 592 LFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKRRALHVAFLDLQKA 651
Query: 1130 YDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRSIGG 1255
+D V R+ + +++KG+ YI +I+ MY + + VR+ G
Sbjct: 652 FDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVG 693
Score = 107 bits (268), Expect(4) = 9e-90
Identities = 51/134 (38%), Positives = 80/134 (59%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + +HQGSALSPFLF + +D + HIQ + PW M++ADDI L E + ++ K+ +W+
Sbjct: 700 ITVGVHQGSALSPFLFNVVLDTVSAHIQDQPPWLMMYADDIALIAENRLTLERKVNLWKG 759
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ G KL+ +K++Y+ C + + + K E F+YLGS++ +G ID
Sbjct: 760 TLENGGLKLNVSKTEYMACG-----SRDSSTILIGPEPAVKSEKFRYLGSVMHESGGIDH 814
Query: 1630 DVAHRIGKGWMKWK 1671
DV RI W KW+
Sbjct: 815 DVHGRISAAWAKWR 828
Score = 44.3 bits (103), Expect(4) = 9e-90
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +1
Query: 1 DCKVISSENLTTQHRLLVMDLEIKRQRRKRVMYGQPKIRWGCFD-------*GQCLXXXX 159
+CKVI E+LT QHRLLVMD + +RK +P+I+W + +
Sbjct: 270 NCKVIPGESLTAQHRLLVMDFNV-TPKRKVAEKRRPRIKWWLLNGPMQTDFLAEVKSHNL 328
Query: 160 XXXXXXSLEE*RGCE*YMVRDGS*H*GSNYGGVRDLEGSLWQSQRGGWWNREVQDXXXXX 339
+ E + ++ G G + GG R ++ W WWN EVQ+
Sbjct: 329 STNTETAQEAWDRAQSAIIAAGRRVLGVSRGG-RVIDKETW------WWNDEVQEVTREK 381
Query: 340 XXXXXXLVESVDEEDRTNRNHYKKARK 420
ES EDR K+A K
Sbjct: 382 KAAFKKWQESNSPEDRLEYTVAKRASK 408
>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 1253
Score = 129 bits (324), Expect(7) = 3e-89
Identities = 58/132 (43%), Positives = 87/132 (65%)
Frame = +3
Query: 1674 LSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTR 1853
++GV+CD+ +P +LK Y+ ++RP +LY E WP + Q++ V EM+MLRWMCG TR
Sbjct: 1097 VTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTR 1156
Query: 1854 RDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRP 2033
D I+N IR +GV V DK+++ RLRW+ HV RR + + C ++V G R GRP
Sbjct: 1157 ADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRP 1215
Query: 2034 KKSWVEVIRQDM 2069
+K W++ ++QDM
Sbjct: 1216 RKRWLDTVKQDM 1227
Score = 111 bits (278), Expect(7) = 3e-89
Identities = 53/134 (39%), Positives = 82/134 (61%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSPFLF + +D + +IQ + PW M++ADDI L DE++ ++ ++ +W+
Sbjct: 967 ISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKG 1026
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ G KL+ TK++Y+ C + + + K E F+YLGSI+ +G ID
Sbjct: 1027 TLENGGLKLNVTKTEYMACGSPDSC-----TIHIGPEPAVKSEKFRYLGSILHESGGIDH 1081
Query: 1630 DVAHRIGKGWMKWK 1671
DV RI W KW+
Sbjct: 1082 DVQARISAAWAKWR 1095
Score = 98.2 bits (243), Expect(7) = 3e-89
Identities = 45/126 (35%), Positives = 84/126 (66%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++Q+C +Y G+K++SHT K++ER+++ R+ ++S Q+ F G AI+ +R L
Sbjct: 838 RGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTL 897
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+E YRE++R+LH+ F+DL+K +D V R+ + ++ KG+ YI +I+ MY + + VR+
Sbjct: 898 MEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRT 957
Query: 1247 IGGGSE 1264
G ++
Sbjct: 958 AVGDTK 963
Score = 41.2 bits (95), Expect(7) = 3e-89
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Frame = +1
Query: 1 DCKVISSENLTTQHRLLVMDLEIKRQRRKRVMYGQPKIRWGCFD*GQCLXXXXXXXXXXS 180
+CKVI E+LT QHRLLVMD + ++K +P+IRW + G +
Sbjct: 537 NCKVIPGESLTAQHRLLVMDY-VVTPKKKVAEKRKPRIRWWLLN-GTMQTSFRAEVESQN 594
Query: 181 L--------EE*RGCE*YMVRDGS*H*GSNYGGVRDLEGSLWQSQRGGWWNREVQDXXXX 336
L E + ++ G G + GG R ++ W WWN EVQ+
Sbjct: 595 LSTNTETAQEVWDRAQSAIITAGKRVLGLSKGG-RVIDKETW------WWNDEVQEVIRE 647
Query: 337 XXXXXXXLVESVDEEDRTNRNHYKKARK 420
+S EDR K+A K
Sbjct: 648 KKTAFKKWQQSNSPEDRLEYIAAKRASK 675
Score = 36.6 bits (83), Expect(7) = 3e-89
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +2
Query: 491 DGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN 649
+G+K +Y+L + R++ + + + +KD + +L ++ R + YF +LLN
Sbjct: 697 EGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLN 749
Score = 23.5 bits (49), Expect(7) = 3e-89
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 745 RVVMRKMSRGRTIGPNKISVEF*KNVG 825
R +R+M + +GP+ I +E K++G
Sbjct: 776 RNCLRRMKNRKAVGPDDIPIEAWKSLG 802
Score = 21.9 bits (45), Expect(7) = 3e-89
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 840 MPEEWRWSKMILLYK 884
MP +WR+S + +YK
Sbjct: 822 MPHQWRYSYITPIYK 836
>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 985
Score = 129 bits (324), Expect(7) = 3e-89
Identities = 58/132 (43%), Positives = 87/132 (65%)
Frame = +3
Query: 1674 LSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTR 1853
++GV+CD+ +P +LK Y+ ++RP +LY E WP + Q++ V EM+MLRWMCG TR
Sbjct: 829 VTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTR 888
Query: 1854 RDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRP 2033
D I+N IR +GV V DK+++ RLRW+ HV RR + + C ++V G R GRP
Sbjct: 889 ADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRP 947
Query: 2034 KKSWVEVIRQDM 2069
+K W++ ++QDM
Sbjct: 948 RKRWLDTVKQDM 959
Score = 111 bits (278), Expect(7) = 3e-89
Identities = 53/134 (39%), Positives = 82/134 (61%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSPFLF + +D + +IQ + PW M++ADDI L DE++ ++ ++ +W+
Sbjct: 699 ISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKG 758
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ G KL+ TK++Y+ C + + + K E F+YLGSI+ +G ID
Sbjct: 759 TLENGGLKLNVTKTEYMACGSPDSC-----TIHIGPEPAVKSEKFRYLGSILHESGGIDH 813
Query: 1630 DVAHRIGKGWMKWK 1671
DV RI W KW+
Sbjct: 814 DVQARISAAWAKWR 827
Score = 98.2 bits (243), Expect(7) = 3e-89
Identities = 45/126 (35%), Positives = 84/126 (66%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++Q+C +Y G+K++SHT K++ER+++ R+ ++S Q+ F G AI+ +R L
Sbjct: 570 RGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTL 629
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+E YRE++R+LH+ F+DL+K +D V R+ + ++ KG+ YI +I+ MY + + VR+
Sbjct: 630 MEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRT 689
Query: 1247 IGGGSE 1264
G ++
Sbjct: 690 AVGDTK 695
Score = 41.2 bits (95), Expect(7) = 3e-89
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Frame = +1
Query: 1 DCKVISSENLTTQHRLLVMDLEIKRQRRKRVMYGQPKIRWGCFD*GQCLXXXXXXXXXXS 180
+CKVI E+LT QHRLLVMD + ++K +P+IRW + G +
Sbjct: 269 NCKVIPGESLTAQHRLLVMDY-VVTPKKKVAEKRKPRIRWWLLN-GTMQTSFRAEVESQN 326
Query: 181 L--------EE*RGCE*YMVRDGS*H*GSNYGGVRDLEGSLWQSQRGGWWNREVQDXXXX 336
L E + ++ G G + GG R ++ W WWN EVQ+
Sbjct: 327 LSTNTETAQEVWDRAQSAIITAGKRVLGLSKGG-RVIDKETW------WWNDEVQEVIRE 379
Query: 337 XXXXXXXLVESVDEEDRTNRNHYKKARK 420
+S EDR K+A K
Sbjct: 380 KKTAFKKWQQSNSPEDRLEYIAAKRASK 407
Score = 36.6 bits (83), Expect(7) = 3e-89
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +2
Query: 491 DGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN 649
+G+K +Y+L + R++ + + + +KD + +L ++ R + YF +LLN
Sbjct: 429 EGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLN 481
Score = 23.5 bits (49), Expect(7) = 3e-89
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 745 RVVMRKMSRGRTIGPNKISVEF*KNVG 825
R +R+M + +GP+ I +E K++G
Sbjct: 508 RNCLRRMKNRKAVGPDDIPIEAWKSLG 534
Score = 21.9 bits (45), Expect(7) = 3e-89
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 840 MPEEWRWSKMILLYK 884
MP +WR+S + +YK
Sbjct: 554 MPHQWRYSYITPIYK 568
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 169 bits (428), Expect(3) = 9e-86
Identities = 78/134 (58%), Positives = 107/134 (79%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSP+LFAL +D + IQ ++PWCMLFADD+VL D+++ GV+ KLE+WRQ
Sbjct: 225 IKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 284
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LESKGF+LSRTK++Y+ C FS + +E+V LD QV+P+K++F YLGS++Q +G ID+
Sbjct: 285 TLESKGFRLSRTKTEYMMCGFS-TTRCEEEEVSLDGQVVPRKDTFWYLGSLLQEDGGIDE 343
Query: 1630 DVAHRIGKGWMKWK 1671
DV HRI GWMKW+
Sbjct: 344 DVNHRIKAGWMKWR 357
Score = 149 bits (376), Expect(3) = 9e-86
Identities = 66/140 (47%), Positives = 97/140 (69%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
SG+LCDK VP +LK KFY+ VVRP MLY E WP K+ + Q++ VAEM MLR MCGHTR+
Sbjct: 360 SGILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQQLDVAEMCMLRCMCGHTRK 419
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D ++N+ IR++VGVAP+ +K+ + RLRWF H++ R +APV ++RG GRP
Sbjct: 420 DRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAPVHSGRLKRAENVKRGRGRPN 479
Query: 2037 KSWVEVIRQDMAQLQLIEDM 2096
+W E +++D+ + +++
Sbjct: 480 LTWEESVKRDLKDWSITKEL 499
Score = 50.1 bits (118), Expect(3) = 9e-86
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 1085 RKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
R + LHM+FIDLEK YDK+ R V+ ++ V YI +IK MYD T VR+
Sbjct: 162 RNKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRT 215
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 224 bits (571), Expect(2) = 2e-84
Identities = 106/141 (75%), Positives = 117/141 (82%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
SGVLCDK +PPRLK KFY++VVRP +LY E WPVK ++ QKM VAEMRMLRWMCGHTR
Sbjct: 124 SGVLCDKKIPPRLKGKFYRMVVRPALLYGAECWPVKNSHVQKMHVAEMRMLRWMCGHTRS 183
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D I+NEVIR KVGVA VVDK+R+ RLRWF HVRRRCADAPVRRCE L V G RRG GRPK
Sbjct: 184 DKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCADAPVRRCEGLVVEGTRRGRGRPK 243
Query: 2037 KSWVEVIRQDMAQLQLIEDMT 2099
K W EVIRQD+AQL + EDMT
Sbjct: 244 KYWGEVIRQDLAQLHITEDMT 264
Score = 118 bits (295), Expect(2) = 2e-84
Identities = 53/72 (73%), Positives = 62/72 (86%)
Frame = +1
Query: 1459 SKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDDDVA 1638
SKGF+LSRTK++YLECKFS + D DVRL TQ+IPKKESFKYLGS+IQG+G+IDDDV
Sbjct: 51 SKGFRLSRTKTEYLECKFSDALDEADGDVRLATQIIPKKESFKYLGSVIQGSGDIDDDVT 110
Query: 1639 HRIGKGWMKWKL 1674
HRIG WMKW+L
Sbjct: 111 HRIGVAWMKWRL 122
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 161 bits (408), Expect(3) = 5e-83
Identities = 103/276 (37%), Positives = 151/276 (54%), Gaps = 15/276 (5%)
Frame = +2
Query: 482 GEKDGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN*EGD 661
G K+GEK +Y+L K RERK R L+QVKCIKDE+ ++LV
Sbjct: 90 GTKEGEKSIYKLSKGRERKTRDLDQVKCIKDEEGRVLVR--------------------- 128
Query: 662 RNIVLGELEHSESSRDFGYCRRVKVDEVEWLCAR*AGAER--SDQI-----KSR*NFRRM 820
H ++ Y RR++ EV R E D I KS + +
Sbjct: 129 ---------HRRGGPNYNYYRRIQEHEVREALKRMGSDEAVGPDNIPIEVWKSLGDRGTV 179
Query: 821 WA-----EDVRDA*GVEMEQDDSVVQV---QGNIQNCNNYMGIKLLSHTKKVWERVVEAR 976
W E +R + + +++ + +G+IQNC NY GIKL+SHT K+WERV++ R
Sbjct: 180 WLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRR 239
Query: 977 MGMIVSISVNQFRFTLGRSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKIYDKVLREVL 1156
+ ++ NQF F LGRS +AIYL++R++E+YR K+ LH++F DLEK YD+V RE+L
Sbjct: 240 LRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREIL 299
Query: 1157 *RCMKAKGVLVVYIRVIKVMYDGAKT*VRSIGGGSE 1264
+ ++ K V + YIR IK MY+ A T V++ G +E
Sbjct: 300 WKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTE 335
Score = 150 bits (380), Expect(3) = 5e-83
Identities = 69/134 (51%), Positives = 96/134 (71%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGS L+P+LF L +D L HIQ P CMLFADD+VL E++ V+ +LE WRQ
Sbjct: 339 ITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQ 398
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ GF+LSR+K+KY+EC FSG + +V++ +IP+ FKYLGS +Q +GEI+
Sbjct: 399 ALEAYGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEIEA 458
Query: 1630 DVAHRIGKGWMKWK 1671
DV+HRI GW+KW+
Sbjct: 459 DVSHRIQAGWLKWR 472
Score = 47.0 bits (110), Expect(3) = 5e-83
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTY 1793
S VLCDK VP +L KFY+ VRP +LY E W VK +
Sbjct: 475 SSVLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKSQH 513
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 168 bits (425), Expect(2) = 3e-79
Identities = 77/135 (57%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSP LF L +D + IQ ++PWCMLFADD+VL D+++ GV+ KLE+WRQ
Sbjct: 15 IKIGLHQGSALSPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 74
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGI-QVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEID 1626
LESKGF+LSRTK++Y++C FS + +E+V LD QV+P+K++F+YLGS++Q +G+ID
Sbjct: 75 TLESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDID 134
Query: 1627 DDVAHRIGKGWMKWK 1671
+DV HRI GWMKW+
Sbjct: 135 EDVNHRIKAGWMKWR 149
Score = 157 bits (397), Expect(2) = 3e-79
Identities = 68/140 (48%), Positives = 99/140 (70%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
SG+LCDK VP +LK KFY+ +RP +LY E WP K+ + Q++ VAEMRMLRWMCGHTRR
Sbjct: 152 SGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRR 211
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D ++N+ IR++VGVAP+ +K+ + RLRWF H++RR DAPV ++RG GRP
Sbjct: 212 DHVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHSGRLKRAGNVKRGRGRPN 271
Query: 2037 KSWVEVIRQDMAQLQLIEDM 2096
+W E +++D+ + +++
Sbjct: 272 LTWEESVKRDLKGWNITKEL 291
>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
Length = 974
Score = 145 bits (367), Expect(4) = 2e-78
Identities = 66/150 (44%), Positives = 100/150 (66%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
S +LCDK VP +LK KFY+ VRP MLY E WP K+ + Q++ + EMRMLRWMCGHTR+
Sbjct: 232 SVILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRHVQQLGMTEMRMLRWMCGHTRK 291
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D ++N+ IR++VGVAP+ +K+ + RLRWF H++R +AP+ ++RG GRP
Sbjct: 292 DQVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRMPPEAPMHSGRLKHAENVKRGRGRPN 351
Query: 2037 KSWVEVIRQDMAQLQLIEDMTEIYYLCALY 2126
+ E I++D+ + +DM + + A++
Sbjct: 352 LTREESIKRDLKDWSITKDMDKGAWKLAIH 381
Score = 124 bits (311), Expect(4) = 2e-78
Identities = 61/120 (50%), Positives = 87/120 (72%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++Q+ NY GIKL+SHT K+WERV+E R+ + S++ NQF F GRS +AI+LVR+L
Sbjct: 17 KGDVQSFTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQL 76
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+++YRE+K+ LHM+FIDLEK YDK+ R V+ ++ V YI +IK MYD T VR+
Sbjct: 77 MKRYREQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRT 136
Score = 70.1 bits (170), Expect(4) = 2e-78
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSP+LFAL +D EV R
Sbjct: 146 IKIGLHQGSALSPYLFALVMD----------------------------------EVTRD 171
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVT----DEDVRLDTQVIPKKESFKYLGSIIQGNG 1617
+ G I T +E+V LD +V+P+K++F+YLGS++Q +G
Sbjct: 172 I--------------------QGDIPCTTRCEEEEVSLDGEVVPQKDTFRYLGSMLQEDG 211
Query: 1618 EIDDDVAHRIGKGWMKWK 1671
+D+DV HRI GWMKW+
Sbjct: 212 GVDEDVDHRIKAGWMKWR 229
Score = 24.6 bits (52), Expect(4) = 2e-78
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 840 MPEEWRWSKMILLYKYK 890
MPEEWR S ++ ++K K
Sbjct: 1 MPEEWRLSILVPIFKNK 17
>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 601
Score = 129 bits (324), Expect(4) = 3e-77
Identities = 58/132 (43%), Positives = 87/132 (65%)
Frame = +3
Query: 1674 LSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTR 1853
++GV+CD+ +P +LK Y+ ++RP +LY E WP + Q++ V EM+MLRWMCG TR
Sbjct: 276 VTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTR 335
Query: 1854 RDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRP 2033
D I+N IR +GV V DK+++ RLRW+ HV RR + + C ++V G R GRP
Sbjct: 336 ADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRP 394
Query: 2034 KKSWVEVIRQDM 2069
+K W++ ++QDM
Sbjct: 395 RKRWLDTVKQDM 406
Score = 111 bits (278), Expect(4) = 3e-77
Identities = 53/134 (39%), Positives = 82/134 (61%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSPFLF + +D + +IQ + PW M++ADDI L DE++ ++ ++ +W+
Sbjct: 146 ISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKG 205
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ G KL+ TK++Y+ C + + + K E F+YLGSI+ +G ID
Sbjct: 206 TLENGGLKLNVTKTEYMACGSPDSC-----TIHIGPEPAVKSEKFRYLGSILHESGGIDH 260
Query: 1630 DVAHRIGKGWMKWK 1671
DV RI W KW+
Sbjct: 261 DVQARISAAWAKWR 274
Score = 98.2 bits (243), Expect(4) = 3e-77
Identities = 45/126 (35%), Positives = 84/126 (66%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++Q+C +Y G+K++SHT K++ER+++ R+ ++S Q+ F G AI+ +R L
Sbjct: 17 RGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTL 76
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+E YRE++R+LH+ F+DL+K +D V R+ + ++ KG+ YI +I+ MY + + VR+
Sbjct: 77 MEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRT 136
Query: 1247 IGGGSE 1264
G ++
Sbjct: 137 AVGDTK 142
Score = 21.9 bits (45), Expect(4) = 3e-77
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 840 MPEEWRWSKMILLYK 884
MP +WR+S + +YK
Sbjct: 1 MPHQWRYSYITPIYK 15
>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
Length = 472
Score = 129 bits (324), Expect(4) = 3e-77
Identities = 58/132 (43%), Positives = 87/132 (65%)
Frame = +3
Query: 1674 LSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTR 1853
++GV+CD+ +P +LK Y+ ++RP +LY E WP + Q++ V EM+MLRWMCG TR
Sbjct: 316 VTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTR 375
Query: 1854 RDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRP 2033
D I+N IR +GV V DK+++ RLRW+ HV RR + + C ++V G R GRP
Sbjct: 376 ADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRP 434
Query: 2034 KKSWVEVIRQDM 2069
+K W++ ++QDM
Sbjct: 435 RKRWLDTVKQDM 446
Score = 111 bits (278), Expect(4) = 3e-77
Identities = 53/134 (39%), Positives = 82/134 (61%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSPFLF + +D + +IQ + PW M++ADDI L DE++ ++ ++ +W+
Sbjct: 186 ISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKG 245
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LE+ G KL+ TK++Y+ C + + + K E F+YLGSI+ +G ID
Sbjct: 246 TLENGGLKLNVTKTEYMACGSPDSC-----TIHIGPEPAVKSEKFRYLGSILHESGGIDH 300
Query: 1630 DVAHRIGKGWMKWK 1671
DV RI W KW+
Sbjct: 301 DVQARISAAWAKWR 314
Score = 98.2 bits (243), Expect(4) = 3e-77
Identities = 45/126 (35%), Positives = 84/126 (66%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++Q+C +Y G+K++SHT K++ER+++ R+ ++S Q+ F G AI+ +R L
Sbjct: 57 RGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTL 116
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+E YRE++R+LH+ F+DL+K +D V R+ + ++ KG+ YI +I+ MY + + VR+
Sbjct: 117 MEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRT 176
Query: 1247 IGGGSE 1264
G ++
Sbjct: 177 AVGDTK 182
Score = 21.9 bits (45), Expect(4) = 3e-77
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 840 MPEEWRWSKMILLYK 884
MP +WR+S + +YK
Sbjct: 41 MPHQWRYSYITPIYK 55
>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
protein [Haemonchus contortus]
Length = 1526
Score = 126 bits (316), Expect(3) = 3e-74
Identities = 63/133 (47%), Positives = 81/133 (60%)
Frame = +3
Query: 1677 SGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRR 1856
+G+LCD LK K Y+ VVRPTMLY E WPV K++ ++ AEMRMLRW CG TR
Sbjct: 859 TGILCDSRCSRTLKGKVYRTVVRPTMLYGSECWPVSKSHEGQLHSAEMRMLRWACGWTRL 918
Query: 1857 DMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPK 2036
D +NE +R + AP+ K R RLRWF HV RR P+R G +R G PK
Sbjct: 919 DRARNEDVRTAMQTAPIQMKTRGQRLRWFGHVLRRPQSHPIREAMEFEAQG-KRPRGAPK 977
Query: 2037 KSWVEVIRQDMAQ 2075
K W +VI++D+A+
Sbjct: 978 KRWRDVIKKDLAE 990
Score = 114 bits (285), Expect(3) = 3e-74
Identities = 79/265 (29%), Positives = 134/265 (50%), Gaps = 9/265 (3%)
Frame = +2
Query: 488 KDGEKKLYRLVKVRERKARGLNQVKCIKDEKCKILVEDTQIRRR*QTYFHKLLN*EGDRN 667
++GEK ++RL K R + + VK +K+ + IL + YF LLN E R
Sbjct: 457 REGEKFVFRLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEEFARQ 516
Query: 668 ------IVLGELE---HSESSRDFGYCRRVKVDEVEWLCAR*AGAERSDQIKSR*NFRRM 820
G + +E R G + K + + + A +K F
Sbjct: 517 NSSQLEATAGPINLWTENEVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWLTRFLNT 576
Query: 821 WAEDVRDA*GVEMEQDDSVVQVQGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSIS 1000
R + + +G+ +C+NY GI+L +HT K++ER+V++R+ +V IS
Sbjct: 577 VTAKGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLAAHTMKLYERLVDSRLRELVPIS 636
Query: 1001 VNQFRFTLGRSITKAIYLVRRLVEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKG 1180
QF F GRS T AI++ R+++ +YRE++R ++ F+DLEK +D++ R+VL R ++ +
Sbjct: 637 EKQFGFMPGRSTTDAIFITRQVMGKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRK 696
Query: 1181 VLVVYIRVIKVMYDGAKT*VRSIGG 1255
V I ++K MYDG+ T +R+ G
Sbjct: 697 VPEHLISLVKDMYDGSTTTIRTPHG 721
Score = 89.4 bits (220), Expect(3) = 3e-74
Identities = 49/134 (36%), Positives = 77/134 (57%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
V + +HQGSALSPFLF L +D + + +L+ADDI L E+++ + KL+ W++
Sbjct: 728 VTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQR 787
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
VL G +L+ K+K+L + + T+ V + I K + F+YLGS + +G +D
Sbjct: 788 VLAESGLRLNVKKAKFLSPE-----EGTESVVDGRGEAIEKVQDFRYLGSDLAADGSVDQ 842
Query: 1630 DVAHRIGKGWMKWK 1671
V RI WMKW+
Sbjct: 843 AVKSRISAAWMKWR 856
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 166 bits (421), Expect(3) = 2e-69
Identities = 77/134 (57%), Positives = 106/134 (79%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + LHQGSALSP+LFAL +D + IQ ++PWCMLFADD+VL D+++ GV+ KLE+WRQ
Sbjct: 509 IKIGLHQGSALSPYLFALLMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 568
Query: 1450 VLESKGFKLSRTKSKYLECKFSGGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDD 1629
LESKG +LSRTK++Y+ C FS +E+V LD QV+P+K++F+YLGS++Q +G ID+
Sbjct: 569 TLESKGLRLSRTKTEYMMCGFS--TTRCEEEVSLDGQVVPQKDTFRYLGSMLQEDGGIDE 626
Query: 1630 DVAHRIGKGWMKWK 1671
DV HRI GWMKW+
Sbjct: 627 DVNHRIKAGWMKWR 640
Score = 120 bits (302), Expect(3) = 2e-69
Identities = 63/120 (52%), Positives = 86/120 (71%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++Q C NY GIKL+SHT K+WERV+E R+ + S++ NQF F GRS +AI+LVR+L
Sbjct: 381 KGDVQICTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQL 440
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+ +YRE+K+ LHM+FIDLEK Y+K+ R + K K V YI +IK MYD A T VR+
Sbjct: 441 MVRYREQKKDLHMVFIDLEKAYNKIPRNLWWALDKHK-VPAKYITLIKDMYDNAVTSVRT 499
Score = 26.6 bits (57), Expect(3) = 2e-69
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 828 RTLEMPEEWRWSKMILLYKYKEISKIAT 911
R +MPEEWR S ++ ++K K +I T
Sbjct: 361 RANKMPEEWRRSILVPIFKNKGDVQICT 388
>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
Length = 747
Score = 147 bits (372), Expect(3) = 2e-69
Identities = 64/139 (46%), Positives = 95/139 (68%)
Frame = +3
Query: 1680 GVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHTRRD 1859
G+LCDK VP +LK KFY++ VRP MLY E W K+ + Q++ VAEMR+LRWMCGHTR+D
Sbjct: 179 GILCDKRVPQKLKGKFYRMTVRPAMLYGAECWLTKRRHVQQLGVAEMRVLRWMCGHTRKD 238
Query: 1860 MIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGRPKK 2039
++N+ IR++VGVAP+ +K+ RLRWF H++RR +AP ++RG GRP
Sbjct: 239 RVRNDDIRDRVGVAPIAEKLCPHRLRWFGHIQRRPLEAPGHSGRLKHAENVKRGRGRPNL 298
Query: 2040 SWVEVIRQDMAQLQLIEDM 2096
+W E + +D+ + +++
Sbjct: 299 TWEEAVNRDLKDWSITKEL 317
Score = 100 bits (249), Expect(3) = 2e-69
Identities = 50/108 (46%), Positives = 65/108 (60%)
Frame = +1
Query: 1348 IQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQVLESKGFKLSRTKSKYLECKFSGGIQ 1527
I ++PWCMLF DD+VL D+++ GV+ KLE+WRQ LESKGF+LSRTK++Y+ C FS
Sbjct: 92 IHEDIPWCMLFVDDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTRC 151
Query: 1528 VTDEDVRLDTQVIPKKESFKYLGSIIQGNGEIDDDVAHRIGKGWMKWK 1671
+ED G ID+DV HRI GWMKW+
Sbjct: 152 EEEED------------------------GGIDEDVNHRIKAGWMKWR 175
Score = 65.5 bits (158), Expect(3) = 2e-69
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +2
Query: 1040 KAIYLVRRLVEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMY 1219
+AI+L R+L+E+YRE+K+ LHM+FIDLEK YDK+ + + ++ V YI +IK MY
Sbjct: 2 EAIFLARQLMERYREQKKDLHMVFIDLEKAYDKIPQNGMWWALEKHKVPTKYITLIKDMY 61
Query: 1220 DGAKT*VRS 1246
D T VR+
Sbjct: 62 DNVLTSVRT 70
>emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
protein [Haemonchus contortus]
Length = 480
Score = 133 bits (334), Expect(3) = 2e-69
Identities = 62/141 (43%), Positives = 88/141 (62%)
Frame = +3
Query: 1671 ALSGVLCDKNVPPRLKEKFYQVVVRPTMLYEMEGWPVKKTYAQKMKVAEMRMLRWMCGHT 1850
+++GVLCDKN+P RLK K Y+ V+RP +Y E WP K ++ V E +MLRW G T
Sbjct: 315 SMTGVLCDKNIPERLKSKIYRTVIRPVAIYGAECWPATKEVEARLSVMETKMLRWTAGVT 374
Query: 1851 RRDMIQNEVIRNKVGVAPVVDKMRKGRLRWFNHVRRRCADAPVRRCERLTVVGLRRGTGR 2030
R D I N+ IR + GVAP+VDKMR+ RLRW+ H R D+ VR+ V +R GR
Sbjct: 375 RLDRISNDAIRERFGVAPIVDKMREARLRWYGHTLRAKNDS-VRKISLNLDVSGKRPRGR 433
Query: 2031 PKKSWVEVIRQDMAQLQLIED 2093
PK+ W++ + +D+ + + D
Sbjct: 434 PKQRWLDTLHEDLKAVNIHPD 454
Score = 93.2 bits (230), Expect(3) = 2e-69
Identities = 45/125 (36%), Positives = 81/125 (64%)
Frame = +2
Query: 887 QGNIQNCNNYMGIKLLSHTKKVWERVVEARMGMIVSISVNQFRFTLGRSITKAIYLVRRL 1066
+G++ +C Y I+LLSH+ K++ER+V++R+ IV ++ NQ F S AI+ R L
Sbjct: 57 KGSLGDCTCYRPIRLLSHSMKIFERIVDSRIRDIVELTTNQCGFVAACSTIDAIHAARLL 116
Query: 1067 VEQYRERKRSLHMMFIDLEKIYDKVLREVL*RCMKAKGVLVVYIRVIKVMYDGAKT*VRS 1246
+E++RE++R +H+ F+DLEK +D+V R+V+ ++ GV I ++++Y K+ V++
Sbjct: 117 LEKHREKRRPVHLAFLDLEKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSRVQT 176
Query: 1247 IGGGS 1261
G S
Sbjct: 177 AAGTS 181
Score = 87.4 bits (215), Expect(3) = 2e-69
Identities = 43/136 (31%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Frame = +1
Query: 1270 VMMDLHQGSALSPFLFALAIDALMCHIQVEVPWCMLFADDIVLFDETQNGVDVKLEVWRQ 1449
+ + +HQGSALSP LF + +D + +Q PW +L+ADD++L E ++ ++ +++ W
Sbjct: 186 ISVGVHQGSALSPLLFVVVMDTITKDLQKPAPWTLLYADDVMLASEDKSELESQVQTWSD 245
Query: 1450 VLESKGFKLSRTKSKYLECKFS--GGIQVTDEDVRLDTQVIPKKESFKYLGSIIQGNGEI 1623
L G +L+ K++YL S G I++ ++ T +FKYLGS I +G +
Sbjct: 246 RLAMFGLRLNVKKTEYLTTDSSEPGSIKINGTELTRTT-------TFKYLGSAIASDGSL 298
Query: 1624 DDDVAHRIGKGWMKWK 1671
+ R+ W+KW+
Sbjct: 299 GFETNSRVNAAWLKWR 314