BLASTX nr result

ID: Atropa21_contig00014042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00014042
         (1115 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350540.1| PREDICTED: micronuclear linker histone polyp...   407   e-111
ref|XP_004235108.1| PREDICTED: uncharacterized protein LOC101252...   399   e-108

>ref|XP_006350540.1| PREDICTED: micronuclear linker histone polyprotein-like [Solanum
            tuberosum]
          Length = 916

 Score =  407 bits (1046), Expect = e-111
 Identities = 235/380 (61%), Positives = 262/380 (68%), Gaps = 9/380 (2%)
 Frame = -2

Query: 1114 LGYLSNADTTSEHEVNVMCQGENEKRITMTGQSXXXXXXXXXXXXXXKDRRGRPSSSKTK 935
            LGY+SNA  TS HEV+VMCQGENEKRITM GQ+              KDRRGR   S+TK
Sbjct: 392  LGYMSNA--TSGHEVDVMCQGENEKRITMAGQNGVILNEEQGMIVKKKDRRGRSRGSRTK 449

Query: 934  GKVILGHSSGTNKNNGDGCMDAVKKDDNEKRNFVAGEGLGTEVAISNGEKILKKKRCGRP 755
             KVI GHSSGTN N+GD  MDAV+K+D+ KR FVAGEG G  +A SNGE+I KK+R G P
Sbjct: 450  SKVIPGHSSGTNTNDGD--MDAVRKEDDGKRKFVAGEGGGNGIATSNGERIFKKERRGLP 507

Query: 754  KGSKNKKRTIGGNFIDANLNNRGQDVGTMRTNVAEKGILVTEENRGDLNEVALVSAV--- 584
            K SK+KKRT G NF DANLNNR QDVGTMR NVAE G+L++EE +GDLNEVALVSAV   
Sbjct: 508  KASKSKKRTTGCNFADANLNNREQDVGTMRLNVAENGMLLSEEYKGDLNEVALVSAVRVV 567

Query: 583  ------GWPKVSKNKKKTIVSSSSDVYSGHGVGAMNTRKEHVNKMASLATDCMVGILSEV 422
                  G PK SKNKKKTI+SSSSDVYSGHGVGAMN+ KEH NKM SLATD MVGILSEV
Sbjct: 568  KRKGVLGRPKGSKNKKKTIISSSSDVYSGHGVGAMNSSKEHENKMVSLATDHMVGILSEV 627

Query: 421  AIAKKDNCSLPQGLHDENKIVESGENQQALVDAAEDGTRRTVKQKKGRGRVKYSKNKKQA 242
             I K D+CSLPQGL +ENKIVESGENQ A VDAAEDGTR+ VK+K+ RGRVK S+NKKQA
Sbjct: 628  TITKMDSCSLPQGLRNENKIVESGENQHAFVDAAEDGTRKMVKKKRCRGRVKSSENKKQA 687

Query: 241  AIRIEVDQDVKANSASFIPCENEVTXXXXXXXXXXXXXXXXKVVDALKIQGMTGEIAIDS 62
            A+R                                           LK + MTG IA  +
Sbjct: 688  AVR-------------------------------------RGRPKGLKNKRMTGVIATVT 710

Query: 61   NGVNLSTKRKNRCGRPKGSK 2
            NGVNLS KRKN  GRPKGSK
Sbjct: 711  NGVNLSIKRKNGRGRPKGSK 730



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 77/291 (26%), Positives = 120/291 (41%), Gaps = 50/291 (17%)
 Frame = -2

Query: 967  RRGRPSSSKTKGKVI-----------LGHSSGT----NKNNGDGCMDAVKKDDNEKRNFV 833
            R GRP  SK K + +           +G+ S       KN G     +  K  N ++N  
Sbjct: 165  RLGRPKGSKNKKRKVGENGESPSAAGIGNDSDAMLMKKKNVGQRHKGSKSKKKNMEQNRE 224

Query: 832  AGEGL----GTEVAISNGEK-ILKKKRCGRPKGSKNKKRTIGGNFIDANLNNRGQDVGTM 668
               G     G E     GE+  +KK+  GRPKGSK++K+T+ GN     L      VG  
Sbjct: 225  HQVGRTKKEGEERRKDCGEEGSIKKRGRGRPKGSKSEKKTVTGNETGVVLLIDDTSVGKR 284

Query: 667  RTNVAEKGILVTEENRGDLNEVA-----LVSAVGWPKVSKNKKKTIVSSSSDVYSGHGVG 503
             T+V EK I    +     N+V+     +   +G P+ S+NKKK ++   + V S +G G
Sbjct: 285  NTDVVEKEICTAGDFGISANQVSGHNEIVKKKIGRPRGSRNKKKVLIGRLT-VPSCNGGG 343

Query: 502  AMNTRKEHVNKMASLATDCMVGILSEVAIAKKDNC---SLPQGLHDENKI---------- 362
            + +      NK          G L + A+  K +      P+G   + KI          
Sbjct: 344  SKDIDS---NKGKIFMPAENAGKLDDFAVGYKKHIVKRGRPRGSKTKKKITLGYMSNATS 400

Query: 361  ------VESGENQQALVDAAEDGT------RRTVKQKKGRGRVKYSKNKKQ 245
                  +  GEN++ +  A ++G          VK+K  RGR + S+ K +
Sbjct: 401  GHEVDVMCQGENEKRITMAGQNGVILNEEQGMIVKKKDRRGRSRGSRTKSK 451


>ref|XP_004235108.1| PREDICTED: uncharacterized protein LOC101252668 [Solanum
            lycopersicum]
          Length = 1673

 Score =  399 bits (1024), Expect = e-108
 Identities = 229/377 (60%), Positives = 260/377 (68%), Gaps = 9/377 (2%)
 Frame = -2

Query: 1114 LGYLSNADTTSEHEVNVMCQGENEKRITMTGQSXXXXXXXXXXXXXXKDRRGRPSSSKTK 935
            L Y+SNA+ T+ HEV+VMCQGE EKRITM GQ+              KDRRGR   SKTK
Sbjct: 390  LAYMSNANATTGHEVDVMCQGEYEKRITMAGQNGVILNEDQGMIVKKKDRRGRSRGSKTK 449

Query: 934  GKVILGHSSGTNKNNGDGCMDAVKKDDNEKRNFVAGEGLGTEVAISNGEKILKKKRCGRP 755
             KVI GHSSGTN ++GD  MDAV+K+D+ KR FVA EG G  +AISNGE+I KK+R G P
Sbjct: 450  SKVIPGHSSGTNTDDGD--MDAVRKEDDGKRKFVA-EGGGNGIAISNGERIFKKERRGLP 506

Query: 754  KGSKNKKRTIGGNFIDANLNNRGQDVGTMRTNVAEKGILVTEENRGDLNEVALVSAV--- 584
            K SK+KKRT G NF DANLNNR QDVGTMR NVAE G+L+TEEN+GDLNE +LVSAV   
Sbjct: 507  KASKSKKRTTGSNFADANLNNREQDVGTMRLNVAENGMLLTEENKGDLNEGSLVSAVRVI 566

Query: 583  ------GWPKVSKNKKKTIVSSSSDVYSGHGVGAMNTRKEHVNKMASLATDCMVGILSEV 422
                  G PK SKNKKKTI+SSSSDVYSGHGVGAMN+ KEH NKMASLATD MVGILSEV
Sbjct: 567  KRKGVLGQPKGSKNKKKTIISSSSDVYSGHGVGAMNSSKEHENKMASLATDHMVGILSEV 626

Query: 421  AIAKKDNCSLPQGLHDENKIVESGENQQALVDAAEDGTRRTVKQKKGRGRVKYSKNKKQA 242
             I K D+CSLPQGLH+ENKI+ESGENQ A+VDAAEDGTR+ VK+K+ RGRVK S+NKKQA
Sbjct: 627  TITKIDSCSLPQGLHNENKIIESGENQHAIVDAAEDGTRKVVKKKRCRGRVKNSENKKQA 686

Query: 241  AIRIEVDQDVKANSASFIPCENEVTXXXXXXXXXXXXXXXXKVVDALKIQGMTGEIAIDS 62
            A+R                                           LK + M GEIA  +
Sbjct: 687  AVR-------------------------------------RGRPKGLKNKRMAGEIATVT 709

Query: 61   NGVNLSTKRKNRCGRPK 11
            N VNLS KRKN  GRPK
Sbjct: 710  NVVNLSIKRKNGRGRPK 726


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