BLASTX nr result

ID: Atropa21_contig00013983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013983
         (963 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343957.1| PREDICTED: AT-rich interactive domain-contai...    72   2e-10
ref|XP_004245587.1| PREDICTED: AT-rich interactive domain-contai...    70   2e-09
ref|XP_006345770.1| PREDICTED: cleft lip and palate transmembran...    69   3e-09
ref|XP_006345769.1| PREDICTED: cleft lip and palate transmembran...    69   3e-09
ref|XP_004239645.1| PREDICTED: cleft lip and palate transmembran...    60   2e-06

>ref|XP_006343957.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Solanum tuberosum]
          Length = 651

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/107 (42%), Positives = 58/107 (54%)
 Frame = -2

Query: 737 KINNQPVQELRCSKRVVPALQKHILCPCCNTCSAYQNXXXXXXXXXXXEDTRPDLTSVFE 558
           K+NNQP + LRCSKR +P LQKH LC  C+ C   +N           +D  PDL SV E
Sbjct: 373 KLNNQPAENLRCSKR-IPNLQKHTLCRGCSLCPTSRN--KVETHQKKEDDLAPDLMSV-E 428

Query: 557 VSVTEKPKISSSVTEKTEEFIDQQTHPEVPMGPLYQAEVPEWTDSYF 417
           VSVTEKPK +  + ++    +D          P +Q EVPEWT   F
Sbjct: 429 VSVTEKPKAAYELPKQKVLKVD----------PDHQIEVPEWTGVIF 465


>ref|XP_004245587.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Solanum lycopersicum]
          Length = 655

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 45/103 (43%), Positives = 55/103 (53%)
 Frame = -2

Query: 737 KINNQPVQELRCSKRVVPALQKHILCPCCNTCSAYQNXXXXXXXXXXXEDTRPDLTSVFE 558
           K+NNQP + LRCSKR +P LQKH LC  C+ C   +N           +D   DL SV E
Sbjct: 374 KLNNQPAENLRCSKR-IPNLQKHTLCRGCSLCPISRN--KVETHQKKEDDIASDLVSV-E 429

Query: 557 VSVTEKPKISSSVTEKTEEFIDQQTHPEVPMGPLYQAEVPEWT 429
           VSVTEKPK +  +  +    +D       P G    AEVPEWT
Sbjct: 430 VSVTEKPKAAYELPRQKAPKVD-------PGGQPRTAEVPEWT 465


>ref|XP_006345770.1| PREDICTED: cleft lip and palate transmembrane protein 1 homolog
           isoform X2 [Solanum tuberosum]
          Length = 593

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   QPLAAFG*TCFIVTHLPKSRANKKKSLLRSSEDSKEDVTVPE 127
           QPLAAFG T  IVT+LPKS+A+KKKSLLR+SEDSKEDVT+PE
Sbjct: 151 QPLAAFGRTYSIVTYLPKSKADKKKSLLRNSEDSKEDVTIPE 192


>ref|XP_006345769.1| PREDICTED: cleft lip and palate transmembrane protein 1 homolog
           isoform X1 [Solanum tuberosum]
          Length = 596

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   QPLAAFG*TCFIVTHLPKSRANKKKSLLRSSEDSKEDVTVPE 127
           QPLAAFG T  IVT+LPKS+A+KKKSLLR+SEDSKEDVT+PE
Sbjct: 151 QPLAAFGRTYSIVTYLPKSKADKKKSLLRNSEDSKEDVTIPE 192


>ref|XP_004239645.1| PREDICTED: cleft lip and palate transmembrane protein 1 homolog
           [Solanum lycopersicum]
          Length = 592

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +2

Query: 2   QPLAAFG*TCFIVTHLPKSRANKKKSLLRSSEDSKED 112
           QPLAAFG T  IVT+LPKS+A+KKKSLLR+SEDSKED
Sbjct: 151 QPLAAFGRTYSIVTYLPKSKADKKKSLLRNSEDSKED 187


Top