BLASTX nr result
ID: Atropa21_contig00013950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00013950
(1546 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34321.1| RNase H family protein [Solanum demissum] 209 3e-69
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A... 117 7e-47
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 139 3e-46
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 136 2e-45
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 144 9e-44
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 148 5e-42
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 96 8e-40
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 114 1e-38
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 125 2e-38
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 105 9e-37
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 118 2e-36
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 112 2e-35
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 107 1e-34
ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein A... 127 4e-33
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262... 100 7e-33
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244... 100 2e-32
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 87 1e-31
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 91 2e-31
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 105 1e-30
ref|XP_004235134.1| PREDICTED: uncharacterized protein LOC101266... 99 4e-29
>gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 209 bits (531), Expect(2) = 3e-69
Identities = 117/361 (32%), Positives = 179/361 (49%), Gaps = 9/361 (2%)
Frame = +2
Query: 347 RAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLN 526
R K + NK+WH PFK+ +LTWR+ + KLPF D + KF ++DS C CC +T+N
Sbjct: 561 REKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETIN 620
Query: 527 HVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWV 706
HVF AS +W +FG LGI +++ +WW V+ N +H +I+H I++ W
Sbjct: 621 HVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWE 680
Query: 707 VWKETCACRYGTQKKFSRYKMEQQVRWIIQAA--TNFPGCKLTSHGKIFATTW*SFNQSQ 880
+WK CAC+YG QKK ME V W ++ + FP ++ + + S
Sbjct: 681 IWKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYP 740
Query: 881 GFWWSVGTNQNQAIKLXXXXXXXXXXXXXXXXEW-TTDHG-----FLHINSVYKSQYWKS 1042
W + I W DH I S S
Sbjct: 741 K--WKIVHWNTPNINCVKINTDGSFSSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAE 798
Query: 1043 *SSLVWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSDKLKHATVKF 1222
+ + I WC+Q G N +ELDS ++ +M ++ +A N ++ ++E+ + +
Sbjct: 799 ALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEV 858
Query: 1223 THCYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQVPSIRSKCE-GNF 1399
HCYREANQ+AD LAK A+ S + ++Y +++P A GS+ LDK Q+PSIR + + NF
Sbjct: 859 NHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIRYDKSNF 918
Query: 1400 F 1402
F
Sbjct: 919 F 919
Score = 82.0 bits (201), Expect(2) = 3e-69
Identities = 38/108 (35%), Positives = 60/108 (55%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W ML++R E ++LW + +G S WWDN G L++ P + +K V+ FI +
Sbjct: 447 WSKMLKIRHSVENNILWIIYAGNVSMWWDNWMGNGALSNILPPPSHYNKDNVKDFIHKRE 506
Query: 186 WDLDKLRRTLSNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAW 329
WD DKL L + I+ I IG+P + D W +ENG+++ K+A+
Sbjct: 507 WDFDKLSDILPPQVVNQIVSIPIGDPNQSDYAIWIPSENGHFTTKSAY 554
>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 622
Score = 117 bits (292), Expect(3) = 7e-47
Identities = 64/174 (36%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCC-STACD 514
R+ +AK + +WH IPFK +L WR K KLP + +S FG C+CC
Sbjct: 351 RNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIE-PLPCFCCFDRGGM 409
Query: 515 QTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHII 694
T+ H+F+ G A+ +WN F A GI+ + + +I WW + N HKL+L T I
Sbjct: 410 DTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTAKPNNAGHKLLLQATPIF 469
Query: 695 VCWVVWKETCACRYGTQ-KKFSRYKMEQQVRWIIQAATNFP-GCKLTSHGKIFA 850
+CW +WK CAC+YG + SR K FP G LT+ GKI A
Sbjct: 470 ICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNAFPNGSALTNEGKIGA 523
Score = 75.9 bits (185), Expect(3) = 7e-47
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
WK+ML R++ E+H+ W++ +G SFWWDN GPLA + + +V F + G
Sbjct: 239 WKNMLDTRQQMEQHIHWKLQAGNYSFWWDNWLGTGPLAQHTASSNRFNNSIVANFWENGE 298
Query: 186 WDLDKL-RRTLSNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAWN 332
W KL R HL I+ + DQ W L +G + K+AW+
Sbjct: 299 WKWRKLVRHAPITHLSSILATRIPQQQHRPDQAIWKLNIHGRFDCKSAWD 348
Score = 44.3 bits (103), Expect(3) = 7e-47
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 936 SNGKVDLGGALRDENGQLIMAFSISIQCTNHNIGKARAALYGELTGAFKMGILISLL 1106
+ GK+ GG +RD+ G++IMAFS + ++N + AAL+G LT AF++G LL
Sbjct: 517 NEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFG-LTWAFELGFKNILL 572
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 139 bits (349), Expect(2) = 3e-46
Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 20/369 (5%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCC-STACD 514
R+ +AK ++ +WH+ IPFK +L WRI K K+P + ++ FG S CYCC A
Sbjct: 410 RNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIE-PSPCYCCVDRAGM 468
Query: 515 QTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHII 694
++NH+F+ G A +W F A G++ ++ + WW + N H+L+L T I
Sbjct: 469 DSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIF 528
Query: 695 VCWVVWKETCACRYG------TQKKFSRYK------------MEQQVRWIIQAATNFPGC 820
+CW +WK CAC+YG ++ K++ YK ++ W T+ C
Sbjct: 529 ICWNLWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTS-EKC 587
Query: 821 KLTSHGKIFATTW*SFNQSQGFWWSVGTNQNQAIKLXXXXXXXXXXXXXXXXEWTTDHGF 1000
K + K+ W N+ W + T+ + E F
Sbjct: 588 KHDT--KVCQVVW---NRPPEEWIKINTDGSALTN----PGNIGAGGIIRNKEGKLVMAF 638
Query: 1001 LHINSVYKSQYWKS*SSLVWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRII 1180
+ ++ ++L+ ++ ++ G+ N+I+ELDS +I + K ++ ++ I
Sbjct: 639 ATSLGEGSNNKAETEAALIGLVH-ALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQI 697
Query: 1181 EETSDKLKHA-TVKFTHCYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDK 1357
E + K H +REAN +AD L+K + + +Y +LP A + +D
Sbjct: 698 ERLQYLIMQTQNFKCQHIFREANWVADALSKHSHHITSPQLYFDSNQLPKEANAYYRMDL 757
Query: 1358 RQVPSIRSK 1384
+PS R +
Sbjct: 758 LNMPSFRRR 766
Score = 75.1 bits (183), Expect(2) = 3e-46
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
WKHML +R++ E+H+ WQ+ +G SFWWDN GPLA + + V F + G
Sbjct: 298 WKHMLAIRQQVEQHIQWQLQAGNCSFWWDNWMGTGPLAQHTCNNIRLNNSKVADFWENGV 357
Query: 186 WDLDKLRRTLSNHLCEIILKIEIGNPE-KEDQVFWDLTENGYYSKKTAW 329
W+ KL I+ I I + ++DQ W L G +S +AW
Sbjct: 358 WNYRKLVEQAPASQLANIMAIAIPQQQYQQDQPVWKLHSQGKFSCHSAW 406
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 136 bits (342), Expect(2) = 2e-45
Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 17/366 (4%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCC-STACD 514
R+ +AK ++ +WH+ IPFK +L WRI K K+P + ++ FG S CYCC A
Sbjct: 410 RNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIE-PSPCYCCVDRAGM 468
Query: 515 QTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHII 694
++NH+F+ G A +W F A G++ ++ + WW + N H+L+L T I
Sbjct: 469 DSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIF 528
Query: 695 VCWVVWKETCACRYGTQ-KKFSRYKMEQQVRWIIQAATNFPGCKLTSH------------ 835
+CW +WK CAC+YG + SR K FP + +H
Sbjct: 529 ICWNLWKNRCACKYGGKATNISRVKYVVYKDNFKMMKNAFPHIQWPAHWTALIHTSEKCK 588
Query: 836 --GKIFATTW*SFNQSQGFWWSVGTNQNQAIKLXXXXXXXXXXXXXXXXEWTTDHGFLHI 1009
K+ W N+ W + T+ + E F
Sbjct: 589 HDTKVCQVVW---NRPPEEWIKINTDGSALTN----PGKIGAGGIIRNKEGKLVMAFATS 641
Query: 1010 NSVYKSQYWKS*SSLVWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEET 1189
K+ ++L+ ++ ++ G+ N+I+ELDS +I + K ++ ++ IE
Sbjct: 642 LGEGTKNKAKTEAALIGLVH-ALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERL 700
Query: 1190 SDKLKHA-TVKFTHCYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQV 1366
+ K H ++EAN +AD L+K + +Y +LP A + +D +
Sbjct: 701 QYLIMQTQNFKCQHIFKEANWVADALSKHNHHITSPQLYFDSNQLPKEANAYYRMDLLNM 760
Query: 1367 PSIRSK 1384
PS R +
Sbjct: 761 PSFRRR 766
Score = 75.1 bits (183), Expect(2) = 2e-45
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
WKHML +R++ E+H+ WQ+ +G SFWWDN GPLA + + V F + G
Sbjct: 298 WKHMLAIRQQVEQHIQWQLQAGNCSFWWDNCMGTGPLAQHTCSNIRLNNSKVADFWENGV 357
Query: 186 WDLDKL-RRTLSNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAW 329
W+ KL + ++ L I+ ++DQ W L G +S +AW
Sbjct: 358 WNCRKLVEQAPASQLANIMAIAIPQQQHQQDQPVWKLHSQGKFSCHSAW 406
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 144 bits (363), Expect(2) = 9e-44
Identities = 97/368 (26%), Positives = 165/368 (44%), Gaps = 19/368 (5%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCC-STACD 514
R+ +AK + +WH IPFK +L WR K KLP + +S FG C+CC A
Sbjct: 103 RNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIE-PLPCFCCFDRAGM 161
Query: 515 QTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHII 694
T+ H+F+ G A+ +WN F A GI+ + + +I WW + N HKL+L T I
Sbjct: 162 DTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATPIF 221
Query: 695 VCWVVWKETCACRYG------TQKKFSRYKMEQQVRWIIQAATNFPGC---------KLT 829
+CW +WK CAC+YG ++ K++ YK ++ + N+P K
Sbjct: 222 ICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFPSINWPANWTTLILTSEKCV 281
Query: 830 SHGKIFATTW*SFNQSQGFWWSVGTNQNQAIK--LXXXXXXXXXXXXXXXXEWTTDHGFL 1003
+ K++ TW + W + T+ + ++T G
Sbjct: 282 HNIKVYKVTW---FKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLG-- 336
Query: 1004 HINSVYKSQYWKS*SSLVWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIE 1183
S + ++ + W + G N+++ELDS ++ + +K A + L +E
Sbjct: 337 -----EGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLE 391
Query: 1184 ETSD-KLKHATVKFTHCYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKR 1360
++ + H +REAN +AD L+K + N+ ++Y+ +LP A + +D
Sbjct: 392 RLQQIIIQTQNFRCCHIFREANWVADALSKHSHNNTAPHVYVHSNQLPKEAHAYYQMDLM 451
Query: 1361 QVPSIRSK 1384
+PS R K
Sbjct: 452 DMPSFRRK 459
Score = 61.6 bits (148), Expect(2) = 9e-44
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +3
Query: 39 EKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGRWDLDKL-RRTL 215
E+H+ W++ +G SFWWDN GPLA + + V F + G W KL R
Sbjct: 2 EQHIHWKLQAGNCSFWWDNWLGTGPLAQHTASSNRFNNSSVADFWENGEWKWRKLVRHAP 61
Query: 216 SNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAWN 332
HL I+ + DQ W L +G + K+AW+
Sbjct: 62 ITHLSNILATRIPQQQHRPDQAIWKLNIHGRFDCKSAWD 100
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 148 bits (374), Expect(2) = 5e-42
Identities = 99/374 (26%), Positives = 169/374 (45%), Gaps = 22/374 (5%)
Frame = +2
Query: 329 EPGRSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCC--S 502
E R+ +AK + +WH+ IPFK +L WR+ K KLP + +S FG S C+CC
Sbjct: 303 EEVRNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSNFGIE-PSSCFCCVDR 361
Query: 503 TACDQTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHI 682
T D ++ H F+ G+ A+ +W F G++ ++ + WW R +N H+L+L
Sbjct: 362 TGMD-SIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQA 420
Query: 683 THIIVCWVVWKETCACRYG------TQKKFSRYKMEQQVRWIIQAATNFPG--------- 817
I + W +WK CAC+YG ++ K++ YK ++ N+PG
Sbjct: 421 MPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINWPGNWAALIQTA 480
Query: 818 --CKLTSHGKIFATTW*SFNQSQGFWWSVGTNQNQAIKL--XXXXXXXXXXXXXXXXEWT 985
CK K+ TTW N+ W + T+ + I +
Sbjct: 481 ERCK--HEIKVCMTTW---NRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFA 535
Query: 986 TDHGFLHINSVYKSQYWKS*SSLVWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFR 1165
T G N + ++ ++W ++ GH N++IELDS ++ + K+ ++
Sbjct: 536 TPLGDGTNNKAEA-------EAALFGLSWALELGHRNILIELDSQLVVQWISKKEPPHWN 588
Query: 1166 LNRIIEETSDKLKHA-TVKFTHCYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGS 1342
+ IE + K H +REAN +AD L+K + +Y S+ +LP A+
Sbjct: 589 VINQIERIQQLIMQTQNFKCNHIFREANWVADALSKHSHTIATPQVYFSNSQLPREAQAY 648
Query: 1343 FILDKRQVPSIRSK 1384
+ +D + +P+ R K
Sbjct: 649 YQMDLQNMPNFRRK 662
Score = 51.6 bits (122), Expect(2) = 5e-42
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
WKHML R+ E+H+ W++ +G S H ++ + V F G
Sbjct: 208 WKHMLITRQHMEQHIQWKLQAGDS--------------HHTNSSSRFNNTKVADFWDNGS 253
Query: 186 WDLDKL-RRTLSNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAW 329
W+ KL + +N L I+ + DQ W L+ NG ++ TAW
Sbjct: 254 WNWRKLIKYAPANQLSSIMATAIPQQQTQHDQAIWKLSSNGCFTCSTAW 302
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 96.3 bits (238), Expect(4) = 8e-40
Identities = 42/125 (33%), Positives = 66/125 (52%)
Frame = +2
Query: 374 VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTA 553
+W+ +PFKI + WR K KLP + + + G ++ S C CC +NH+ G A
Sbjct: 363 IWNKHLPFKIAFFIWRALKGKLPTNEFLQRIGSNI-SDCSCCYRKGKDDINHILINGNFA 421
Query: 554 SNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACR 733
IW A LGI +R + W + N++HKL++HI ++CW +WK CA +
Sbjct: 422 KYIWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVK 481
Query: 734 YGTQK 748
YG ++
Sbjct: 482 YGKKR 486
Score = 70.5 bits (171), Expect(4) = 8e-40
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R + E + W +NSGT SFWWDN LA Q ++ + +V F+K G+
Sbjct: 239 WRYLTRNRLKVESFIKWNINSGTCSFWWDNWLDIENLASQNEHISSLNNSMVADFLKDGK 298
Query: 186 WDLDKLRRTLSNHLCEIILKIEIGN-PEKEDQVFWDLTENGYYSKKTAW 329
W+ +R+ ++ L IL+ + K+D W TE G +S +AW
Sbjct: 299 WNESLIRQQVTPLLVPKILQKQFNYIAGKDDTAIWMPTETGIFSISSAW 347
Score = 40.8 bits (94), Expect(4) = 8e-40
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Frame = +3
Query: 933 KSNGKVDLGGALRDENGQLIMAFSISIQCTNHNIGKARAALYG----ELTGAFKMGILIS 1100
+++GK GG LRD G+++ AFSI +N + +AALYG E G K+ + +
Sbjct: 556 QNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKKVELEVD 615
Query: 1101 ---LLNW------IPW 1121
L NW IPW
Sbjct: 616 SELLFNWIKNTTKIPW 631
Score = 25.8 bits (55), Expect(4) = 8e-40
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 832 PWKDFCHNLVKL----QPVSRILVVCWNKPESG-YQASTKAMA 945
PW+ +NLV + +I++V WNKP G Y+ +T A
Sbjct: 512 PWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSA 554
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 114 bits (286), Expect(2) = 1e-38
Identities = 78/344 (22%), Positives = 152/344 (44%), Gaps = 14/344 (4%)
Frame = +2
Query: 374 VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTA 553
+W +P KI + WR+W+ K+ D + + + SKCYCC +T+ H+ A
Sbjct: 496 MWIKGMPIKISFFLWRVWRRKIATYDNLKRMKIPVVSKCYCCKEGEMETMTHLLLTAPIA 555
Query: 554 SNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACR 733
+W QF + GI + L ++ +I WW + N + +++ + +I+ W +WK + R
Sbjct: 556 QKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIM-WELWKRRNSYR 614
Query: 734 YGTQKKFSRYKMEQQVRWIIQAATNFPGCK-LTSHGKIFATTW*SF------------NQ 874
+G + ++ + Q+ FP K LT H ++
Sbjct: 615 HGKETTYNNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKP 674
Query: 875 SQGFWWSVGTNQNQAIKLXXXXXXXXXXXXXXXXEWTTDHGFLHINSVYKSQYWKS*SSL 1054
S+G+ V N + A K + D + +++ ++ ++ ++
Sbjct: 675 SEGW---VTCNTDGASK----GNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATT 727
Query: 1055 VWR-INWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSDKLKHATVKFTHC 1231
VW+ + +C +NG + +E DS+ + M + L +EE + ++ V+ H
Sbjct: 728 VWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHV 787
Query: 1232 YREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQ 1363
YRE NQLAD++A +N++ ++ +LP+ K +DK Q
Sbjct: 788 YREVNQLADFIANTTINTEHKKVFHHFHQLPSLGKKLLNIDKHQ 831
Score = 73.9 bits (180), Expect(2) = 1e-38
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+ M+ +REE E + WQ+ +G SSFW+DN T +G L + + A+ +L V+ FI
Sbjct: 371 WRKMISIREEVEHDIWWQIKAGNSSFWFDNWTRQGALYYTEGDCAQEEELEVQYFITNDG 430
Query: 186 WDLDKLRRTLSNHLCE-IILKIEIGNPEKE-DQVFWDLTENGYYSKKTAWN 332
WD KL+ LS + E IIL I E+ D+ +W G ++ K+A++
Sbjct: 431 WDETKLKDLLSEEMVEHIILNIRPKTSEEGIDKAWWCGNLTGLFTVKSAYH 481
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 107 bits (266), Expect(2) = 2e-38
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACD- 514
R R K +WH SIPFK +L WR + KLP + + FG + C+CC
Sbjct: 586 REKRTKTIFNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKLISFGNE-PANCFCCCNRSGL 644
Query: 515 QTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHII 694
T+ H F++G A+ +W F A GI + + +I WW + N ++LIL T I
Sbjct: 645 DTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIF 704
Query: 695 VCWVVWKETCACRY-GTQKKFSRYKMEQQVRWIIQAATNFPGCKLTSH 835
+CW +WK CA +Y G Q SR K T FP K S+
Sbjct: 705 ICWNLWKNRCASKYGGKQSNISRVKYAIYKDNYKLMTTTFPQIKWPSN 752
Score = 81.3 bits (199), Expect(2) = 2e-38
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
WKH++ + + E+H+ W++NSG+ SFWWDN GPLA + + + + V +F+ +G+
Sbjct: 474 WKHLMHNKHKVEEHIQWKLNSGSCSFWWDNWLGVGPLARFSTDSNRLNNTTVAEFLVEGQ 533
Query: 186 WDLDKL-RRTLSNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAWN 332
W+++KL ++ +++L I+ E +Q W L +G ++ +AWN
Sbjct: 534 WNVNKLIQQAPNDYLANILSTKFYVQQEIPNQAIWKLNSDGNFTYSSAWN 583
Score = 125 bits (313), Expect(3) = 2e-38
Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Frame = +2
Query: 341 SIRAKQPL--INK-VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTAC 511
SIR K+ + INK WH IPFK +L WR + KLP + + FG S C+CC +
Sbjct: 881 SIREKREITKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIE-PSDCHCCHSPG 939
Query: 512 DQTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHI 691
T+ H + G A N+W F LGI+ +LP+R++I WW N+ HKLILH T I
Sbjct: 940 IDTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPI 999
Query: 692 IVCWVVWKETCACRY-GTQKKFSRYK 766
+CW +WK CA +Y G Q +R K
Sbjct: 1000 FICWNLWKNRCAVKYGGKQSNIARVK 1025
Score = 60.8 bits (146), Expect(3) = 2e-38
Identities = 30/99 (30%), Positives = 46/99 (46%)
Frame = +3
Query: 36 AEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGRWDLDKLRRTL 215
A ++ W++ SG+ SFWWDN GPLAH + + V +FI++G W++ K+ R
Sbjct: 799 AGSNIQWRIRSGSCSFWWDNWLGVGPLAHYTSNSNRFNNDSVSEFIEEGHWNIPKVLRV- 857
Query: 216 SNHLCEIILKIEIGNPEKEDQVFWDLTENGYYSKKTAWN 332
Q W L +G +S +AWN
Sbjct: 858 ----------------APPSQAVWKLNSSGLFSVSSAWN 880
Score = 22.7 bits (47), Expect(3) = 2e-38
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = +1
Query: 835 WKDFCHNLVKLQPVSRILVVCWNKP 909
W FC+ + +++ V W KP
Sbjct: 1049 WNKFCNVIENCSQDTKVTAVQWTKP 1073
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 105 bits (261), Expect(4) = 9e-37
Identities = 49/164 (29%), Positives = 81/164 (49%)
Frame = +2
Query: 254 WQP*KRGSSVLGSNREWLLLKENSLEPGRSIRAKQPLINKVWHSSIPFKI*YLTWRIWKA 433
W P + G + S W ++++ ++ + N VWH IPFKI + WR +
Sbjct: 573 WTPEENGKFTIAS--AWEVIRKK--------KSTDIINNSVWHKHIPFKISFFIWRALRG 622
Query: 434 KLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPI 613
KLP D + KFG + + CYCC+ +NH+ G A+ IW + GI + +
Sbjct: 623 KLPTYDYLQKFGSNA-TDCYCCNRKGIDDINHILITGNFANYIWKYYAPTFGITQINIDL 681
Query: 614 RHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACRYGTQ 745
R ++ W + N ++KL++ I +CW +WK CA +YG +
Sbjct: 682 RSLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCAVKYGNK 725
Score = 55.1 bits (131), Expect(4) = 9e-37
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +2
Query: 1064 INWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSD---KLKHATVKFTHCY 1234
++WC Q+G+ ++++E+DS ++ + + A +R + IE D K+ H + H Y
Sbjct: 839 LDWCEQHGYKSILLEVDSEILQKWISNTIAIPWRYQQTIEHIQDIGRKMDH--FECQHVY 896
Query: 1235 REANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQVPSIRSK 1384
RE N AD L+K + + + Q+L +GS+ILDK + R +
Sbjct: 897 REVNGTADLLSKWSHKLDILQHFYTSQQLIGSIRGSYILDKLGTQNFRRR 946
Score = 36.6 bits (83), Expect(4) = 9e-37
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 939 NGKVDLGGALRDENGQLIMAFSISIQCTNHNIGKARAALYG 1061
+GK+ GG LRD G+L AFSI +NI + AA YG
Sbjct: 798 SGKIGGGGILRDYTGKLHYAFSIPFGLGTNNIAEMEAARYG 838
Score = 26.2 bits (56), Expect(4) = 9e-37
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +1
Query: 826 HFPWKDFCHNLVKL----QPVSRILVVCWNKPESG-YQASTKAMA 945
+ PW+ + L+ L Q ++++V W KP+ G Y+ +T A
Sbjct: 750 NIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSA 794
Score = 65.5 bits (158), Expect = 6e-08
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W++ + R+ E ++ W ++SG+SSFWWDN LA+Q ++ + + V F+ G
Sbjct: 479 WRYFTRNRQAVESYIKWNIHSGSSSFWWDNWLGNEALANQVINISSLNNIHVSDFLTNGI 538
Query: 186 WDLDKLRRTLSNHLCEIILKIEIG-NPEKEDQVFWDLTENGYYSKKTAWNL 335
W+ +R+ + + I++ + N ED W ENG ++ +AW +
Sbjct: 539 WNERYVRQHVPPTMVPDIMQTQFKYNINIEDTAIWTPEENGKFTIASAWEV 589
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 118 bits (295), Expect(2) = 2e-36
Identities = 97/402 (24%), Positives = 157/402 (39%), Gaps = 53/402 (13%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQ 517
R R K P+ N +WH IPFK+ + WR + KLP + + + GK+L S CYCC
Sbjct: 1090 RKKRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQRIGKNL-SDCYCCYNKGKD 1148
Query: 518 TLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIV 697
+NH+ G A IW + + +G+ +R ++ W + N++HKL++HI +
Sbjct: 1149 DINHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFI 1208
Query: 698 CWVVWKETCACRYGTQKKFSRYKMEQQV-RWIIQAAT----------------------- 805
CW +WK CA +YG K S Y+++ + + I+Q T
Sbjct: 1209 CWNLWKNRCAVKYGL-KNSSIYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCK 1267
Query: 806 --------------------NFPGCKLTSHGKIFATTW*SFNQSQGFW-----WSVGTNQ 910
N G L + GKI NQ + + + GTN
Sbjct: 1268 QHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNN 1327
Query: 911 NQAIKLXXXXXXXXXXXXXXXXEWTTDHGF----LHINSVYKSQYWKS*SSLVWRINWCI 1078
IK +W HG+ L ++S + S ++ WR I
Sbjct: 1328 FAEIK-----------AALHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELI 1376
Query: 1079 QNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSDKLKHATVKFTHCYREANQLAD 1258
Q H + +K F+ + H YREAN AD
Sbjct: 1377 QQIHQII---------------RKMDQFQCH------------------HIYREANCTAD 1403
Query: 1259 WLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQVPSIRSK 1384
L+K + N + + + ++L +GS++L+K V + R +
Sbjct: 1404 LLSKWSHNLEILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRR 1445
Score = 63.5 bits (153), Expect(2) = 2e-36
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R++ E + W + SGT SFWWD K PLA Q ++ + +V F+ G
Sbjct: 979 WRYLTRNRQKVESLIKWHIQSGTCSFWWDCWLDK-PLAMQCDHVSSLNNSVVADFLINGN 1037
Query: 186 WDLDKLRRTLSNHLCEIILKIEIG-NPEKEDQVFWDLTENGYYSKKTAWN 332
W+ LR+ + L IL+ +I D W TE+G ++ +AW+
Sbjct: 1038 WNERLLRQHVPPQLVPYILQTKINYQAGNIDTSIWTPTESGQFTISSAWD 1087
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 112 bits (279), Expect(4) = 2e-35
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Frame = +2
Query: 242 ENRNWQP*KRGSSVLGSNREWLLLKENSLEPGRSIRAKQPL--INKV-WHSSIPFKI*YL 412
+N W P + G+ + S E IR K+P+ IN + WH +PFKI +
Sbjct: 875 DNAIWIPTETGNFTIASAWE-------------CIRNKRPIDTINTIIWHKHLPFKIAFF 921
Query: 413 TWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTASNIWNQFGAPLGI 592
WR K KLP +++ +FG + SKCYCC + +NH+ G A +IW A LG+
Sbjct: 922 IWRALKGKLPTNELLQRFGSAI-SKCYCCYSKGKDDINHILINGNFAKHIWKIHAAILGV 980
Query: 593 KHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACRYGTQ 745
+ +R + W + N++HKL++HI ++CW +WK CA +YG +
Sbjct: 981 VPANTTLRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNK 1031
Score = 41.6 bits (96), Expect(4) = 2e-35
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 933 KSNGKVDLGGALRDENGQLIMAFSISIQCTNHNIGKARAALYG 1061
+++GK+ GG LRD G+++ AFS+ +NI + +AALYG
Sbjct: 1102 QNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYG 1144
Score = 40.8 bits (94), Expect(4) = 2e-35
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +2
Query: 1055 VWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSDKLKHATVKFT--- 1225
++ + WC Q+G+ + +E+DS ++ K+K + I E+ ++K T K
Sbjct: 1142 LYGLEWCDQHGYKRVELEVDSQLLCNWIKNKT----NIPWIYEDLIQQIKQITRKIEQFQ 1197
Query: 1226 --HCYREANQLADWLAK 1270
H YREAN AD L+K
Sbjct: 1198 CHHIYREANITADLLSK 1214
Score = 24.3 bits (51), Expect(4) = 2e-35
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 832 PWKDFCHNLVKL----QPVSRILVVCWNKPESG-YQASTKAMA 945
PW+ + L+ + + +I++V WNKP G Y+ +T A
Sbjct: 1058 PWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSA 1100
Score = 73.6 bits (179), Expect = 2e-10
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R + E + WQ++SGTSSFWWDN LA Q+ ++ + +V FIK G+
Sbjct: 785 WRYLTRNRLKVESLIKWQIHSGTSSFWWDNWLDNENLASQSDHISSLNNGVVTDFIKDGK 844
Query: 186 WDLDKLRRTLSNHLCEIILKIEIG-NPEKEDQVFWDLTENGYYSKKTAW 329
W+ +R ++ IL+ ++ + KED W TE G ++ +AW
Sbjct: 845 WNESLIRHQVNPLFIPKILQTKLNYSTGKEDNAIWIPTETGNFTIASAW 893
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 107 bits (268), Expect(2) = 1e-34
Identities = 97/391 (24%), Positives = 148/391 (37%), Gaps = 54/391 (13%)
Frame = +2
Query: 374 VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTA 553
+WH +PFKI + WR K KLP + + + G + S CC +NH+ G A
Sbjct: 981 IWHKHLPFKIAFFIWRALKGKLPTNEFLQRIGSDI-SDYSCCYRKGKDDINHILINGNFA 1039
Query: 554 SNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACR 733
IW A LGI +R + W + N++HKL++HI I+CW +WK CA +
Sbjct: 1040 KYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAVK 1099
Query: 734 YGTQK------KFSRYKMEQQV------------RW---------------IIQAATNFP 814
YG ++ K+ +K QV W I+ + N P
Sbjct: 1100 YGKKRSSIHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKP 1159
Query: 815 ----------GCKLTSHGKIFATTW*SFNQSQG-------FWWSVGTNQNQAIKLXXXXX 943
G + + GKI + QG + VGTN IK
Sbjct: 1160 ALGTYKLNTDGSAIQNSGKIGGGG--NLRDFQGKIVYAFSIPFGVGTNNFAEIK------ 1211
Query: 944 XXXXXXXXXXXEWTTDHGF----LHINSVYKSQYWKS*SSLVWRINWCIQNGHTNLIIEL 1111
EW HG+ L +NS + K+ + + WR +Q
Sbjct: 1212 -----AALYGMEWCEQHGYKKVELEVNSELLYNWIKNTTKIPWRYEDLVQQ--------- 1257
Query: 1112 DSMVITEMFKDKKAGNFRLNRIIEETSDKLKHATVKFTHCYREANQLADWLAKIALNSQD 1291
I++ S K++ H YREAN AD L+K + N +
Sbjct: 1258 ----------------------IQQISMKMEQ--FHCHHIYREANNTADLLSKWSNNCEI 1293
Query: 1292 NNIYLSDQELPNGAKGSFILDKRQVPSIRSK 1384
+ + ++L KGS+IL+K V + R +
Sbjct: 1294 VQHFYTTRQLEGAIKGSYILEKMGVQNFRRR 1324
Score = 67.4 bits (163), Expect(2) = 1e-34
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R + E + W + SGT SFWWDN LA Q ++ + +V F+K G+
Sbjct: 857 WRYLTRNRLKVESFIKWNITSGTCSFWWDNWLDIENLASQNEHISSLNNSVVADFLKDGK 916
Query: 186 WDLDKLRRTLSNHLCEIILKIEIG-NPEKEDQVFWDLTENGYYSKKTAW 329
W+ +R+ ++ L IL+ + K+D W TE G +S +AW
Sbjct: 917 WNESLIRQQVTPLLVPKILQKQFNFTAGKDDTATWMPTETGIFSIASAW 965
>ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 421
Score = 127 bits (318), Expect(2) = 4e-33
Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 4/352 (1%)
Frame = +2
Query: 341 SIRAKQP---LINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTAC 511
+IR K+P L N +WH IPFK+ +L WR + K P D + FG +KC CC +
Sbjct: 119 NIRTKRPKIKLYNYIWHRHIPFKVSFLLWRALRGKFPTNDKTTTFGV-APAKCSCCIKSG 177
Query: 512 DQTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHI 691
T++H+F G A++IW A LG++ +P++++I WW + KN++ +L+ H I
Sbjct: 178 WDTIDHIFVTGHFANHIWQFHSAMLGVRQDKIPLKNLIKRWWTMEYKNEIQELLYHSMPI 237
Query: 692 IVCWVVWKETCACRYGTQKKFSRYKMEQQVRWIIQAATNFPGCKLTSHGKIFATTW*SFN 871
I+ +WK C+ +YG + + E VR II CKL +
Sbjct: 238 IISCNLWKNRCSAKYGGKHYVQQCSHEIAVRPIISTKPLVNYCKLNTDVPF--------- 288
Query: 872 QSQGFWWSVGTNQNQAIKLXXXXXXXXXXXXXXXXEWTTDHGFLHINSVYKSQYWKS*SS 1051
GT+ N ++ W HG+ +
Sbjct: 289 ---------GTSTNNQAEV---------QVAVFGLNWCYQHGYKRV-------------- 316
Query: 1052 LVWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSDKLKH-ATVKFTH 1228
++E+DS ++T ++ + ++E + ++ + + H
Sbjct: 317 ----------------VLEVDSELLTHWLNLNINPPRKIQQYVKELHNLIQQMESFQCLH 360
Query: 1229 CYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQVPSIRSK 1384
YREAN AD+LAK++ + ++ + +L KG+++L+K + + R +
Sbjct: 361 TYREANTTADFLAKLSHKKDISQLFYTLNQLNVPIKGNYLLEKMGMINFRRR 412
Score = 43.1 bits (100), Expect(2) = 4e-33
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +3
Query: 78 SFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGRWDLDKLRRTLSNHLCEIILKIEIG 257
SFW D+ +GPLAH E + + V Q++ G W+ E +++ + G
Sbjct: 50 SFWLDDWLGEGPLAHHTNESTRLNNTTVSQYLLNGGWN-------------ENMIQFQEG 96
Query: 258 NPEKEDQVFWDLTENGYYSKKTAW 329
DQ W LT NG ++ +AW
Sbjct: 97 ---VADQPIWKLTNNGRFTCASAW 117
>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
lycopersicum]
Length = 764
Score = 99.8 bits (247), Expect(2) = 7e-33
Identities = 46/125 (36%), Positives = 64/125 (51%)
Frame = +2
Query: 374 VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTA 553
+WH IPFKI + WR K KLP D + FGK + +CYCC +NH+ S G A
Sbjct: 590 IWHKYIPFKISFFIWRAIKGKLPTNDNLQIFGKPAE-ECYCCYKQGKDDINHILSTGHFA 648
Query: 554 SNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACR 733
+ IW + LG+ H IR + W N + K + I I+CW +WK CA +
Sbjct: 649 NYIWKYYARKLGVIHLQTNIRSLFILWRNQHATNQVLKTLFQILPNIICWNLWKNRCAVK 708
Query: 734 YGTQK 748
YG ++
Sbjct: 709 YGNKR 713
Score = 69.7 bits (169), Expect(2) = 7e-33
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R E E H+ W + SGTSS WWDN T G +A+ ++ + +++ + + G+
Sbjct: 466 WRYLTRNRIEVEVHIRWHIQSGTSSLWWDNWTGNGAIANYCDHVSSLNNMVLAECLTNGK 525
Query: 186 WDLDKLRRTLSNHLCEIILKIEIGNPE-KEDQVFWDLTENGYYSKKTAWNL 335
W+ +R+ + L IL+ I E ED W E+G +S +AW++
Sbjct: 526 WNERFIRQHVPAILIPHILQTCINYKEGAEDTAIWLPEESGKFSIASAWDI 576
>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
lycopersicum]
Length = 764
Score = 100 bits (248), Expect(2) = 2e-32
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 374 VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTA 553
+WH IPFKI + WR + KLP D + FGK + +CYCC +NH+ S G A
Sbjct: 590 IWHKYIPFKISFFIWRAIRGKLPTNDSLQIFGKPAE-ECYCCYKQGKDDINHILSTGHFA 648
Query: 554 SNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACR 733
+ IW + LG+ H IR + W N + K + I I+CW +WK CA +
Sbjct: 649 NYIWKYYARKLGVIHLQTNIRSLFIQWRNQHATNQVLKTLFQILPNIICWNLWKNRCAVK 708
Query: 734 YGTQKKF---SRYKMEQQVRWIIQ 796
YG ++ ++Y + + V II+
Sbjct: 709 YGNKRSSINRAQYGIYKDVMQIIK 732
Score = 67.8 bits (164), Expect(2) = 2e-32
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R E E + WQ+ SGTS+ WWDN T G +A+ ++ + +++ + + G+
Sbjct: 466 WRYLTRNRIEVEVQIRWQIQSGTSNLWWDNWTGNGAIANYCDHVSSLNNMVLAECLTNGK 525
Query: 186 WDLDKLRRTLSNHLCEIILKIEIGNPE-KEDQVFWDLTENGYYSKKTAWNL 335
W+ +R+ + L IL+ I E ED W E+G +S +AW++
Sbjct: 526 WNERFIRQHVPAILIPHILQTCINYKEGDEDNAIWLPEESGKFSIASAWDI 576
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 86.7 bits (213), Expect(2) = 1e-31
Identities = 35/135 (25%), Positives = 70/135 (51%)
Frame = +2
Query: 374 VWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQTLNHVFSQGTTA 553
+W +PFK+ + WR+WK ++ +D + + + S+C+CCS ++T+ H+F A
Sbjct: 902 IWTKDVPFKMNFFLWRLWKRRIATDDNLKRMKIQIVSRCWCCSETEEETMTHIFLTAPIA 961
Query: 554 SNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIVCWVVWKETCACR 733
+ +W QF GI+ + ++ +I +WW+ N K+++ I+ W +WK +
Sbjct: 962 NRLWRQFSNFAGIQIESMHLQQLIINWWK-HSDNAKLKVVMRAMPTIIMWTLWKRRNNFK 1020
Query: 734 YGTQKKFSRYKMEQQ 778
+ +S M+ Q
Sbjct: 1021 HRGTTTYSEVVMQVQ 1035
Score = 78.6 bits (192), Expect(2) = 1e-31
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+ M+ VREE E ++ WQ+ +G SSFW+DN T +G L + A K+ V+ F QG
Sbjct: 777 WRKMITVREEVEHNIWWQIKAGNSSFWFDNWTKQGALWYVEENNAVEEKIEVKYFTHQGA 836
Query: 186 WDLDKLRRTLSNHLCEIILKIEIGNPEKE---DQVFWDLTENGYYSKKTAWNL 335
WD +KL +S + + I++ I P +E D +W + G ++ K+AW L
Sbjct: 837 WDREKLLNKISEEMTDYIME-SIKPPLEEYINDVAWWMGSTQGIFTVKSAWEL 888
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 91.3 bits (225), Expect(2) = 2e-31
Identities = 39/137 (28%), Positives = 66/137 (48%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQ 517
R P+ +WH +IPFK+ + W+ + KLP D + FG + +CYCC
Sbjct: 646 RKKNISDPINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMNFGMD-EQECYCCFRKGKD 704
Query: 518 TLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIV 697
+ H+ G A IW LG+ + +R ++ W + N + KL+ I +
Sbjct: 705 DILHILITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFI 764
Query: 698 CWVVWKETCACRYGTQK 748
CW +WK CA ++G+++
Sbjct: 765 CWNLWKNRCAVKHGSKQ 781
Score = 73.2 bits (178), Expect(2) = 2e-31
Identities = 31/111 (27%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ ++R+E EK++ W +++G SFWWDN G +A + ++ + + + + + G+
Sbjct: 534 WRYLTRIRQEVEKYIKWNIHTGNCSFWWDNWIGDGAVATKCDNISSLNNVKIAELTENGK 593
Query: 186 WDLDKLRRTLSNHLCEIILKIEI-GNPEKEDQVFWDLTENGYYSKKTAWNL 335
W ++R+ + L IL I EK D W L + G ++ +AWN+
Sbjct: 594 WKERQVRQLVPPLLVPNILDTVIQAKNEKSDYAIWTLEDKGKFTIHSAWNI 644
Score = 50.8 bits (120), Expect(2) = 1e-09
Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +2
Query: 1055 VWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIEETSDKL-KHATVKFTHC 1231
++ ++WC Q+G+ +I+E+DS ++++ + +R I + D + K + H
Sbjct: 891 LYGLSWCEQHGYKRIILEVDSELLSKWIDNSINIPWRCQPTIYQIQDIVNKMEYFQCQHI 950
Query: 1232 YREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQVPSIRSK 1384
+REAN AD LAK + + + Q+L +G+++L+K V S R +
Sbjct: 951 FREANGTADLLAKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKMGVQSFRRR 1001
Score = 40.0 bits (92), Expect(2) = 1e-09
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 945 KVDLGGALRDENGQLIMAFSISIQCTNHNIGKARAALYG 1061
K+ GG LRD NG+LI AF+I +N + +AALYG
Sbjct: 855 KIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYG 893
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 105 bits (261), Expect(2) = 1e-30
Identities = 46/145 (31%), Positives = 79/145 (54%)
Frame = +2
Query: 338 RSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLDSKCYCCSTACDQ 517
R R+ P+ N +WH IPFKI + W KLP +++ + G+ + CYCC +
Sbjct: 237 RKKRSHDPINNIIWHKHIPFKISFFIWGALTGKLPTNEILQRLGRDIVD-CYCCYSKVKD 295
Query: 518 TLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLILHITHIIV 697
+NH+ G A+ IW + + +G H +R + W ++ N++HKL++H I+
Sbjct: 296 DINHILLTGNFANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHTLPNII 355
Query: 698 CWVVWKETCACRYGTQKKFSRYKME 772
CW +W+ CA +YG K+ S Y+++
Sbjct: 356 CWNLWENRCAVKYG-GKQSSIYRVQ 379
Score = 56.6 bits (135), Expect(2) = 1e-30
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W+++ + R + E + W + SGT SFW DN LA+ ++ +K ++ F G+
Sbjct: 125 WRYLTKNRHKFESLIKWSIRSGTYSFWLDNWLENDSLANHCDHISSLNKSRLDDFWIDGK 184
Query: 186 WDLDKLRRTLSNHLCEIILKIEIG-NPEKEDQVFWDLTENGYYSKKTAWNL 335
W+ +R+ + L IIL+ N KED W E ++ +AW +
Sbjct: 185 WNESLIRQHVPPLLIPIILQTLFNYNEGKEDTAIWIPDETVKFTISSAWKV 235
Score = 54.3 bits (129), Expect(2) = 4e-11
Identities = 29/113 (25%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = +2
Query: 1055 VWRINWCIQNGHTNLIIELDSMVITEMFKDKKAGNFRLNRIIE---ETSDKLKHATVKFT 1225
++ + WC Q+G+ ++++E+DS ++++ + +R + ++ E + KL H +
Sbjct: 482 LYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQIPWRCQQYVQHIHEITKKLHHFQCQ-- 539
Query: 1226 HCYREANQLADWLAKIALNSQDNNIYLSDQELPNGAKGSFILDKRQVPSIRSK 1384
H YRE N AD LAK + N + + + ++ +GS+IL+K + + R +
Sbjct: 540 HIYREENSTADLLAKWSHNIEIPQDFYTTRQFKGTIRGSYILEKMGIQNFRRR 592
Score = 42.0 bits (97), Expect(2) = 4e-11
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 933 KSNGKVDLGGALRDENGQLIMAFSISIQCTNHNIGKARAALYG 1061
+ NG ++ GG LRD G +I AF+ +NI K +AALYG
Sbjct: 442 QENGNIEGGGILRDHQGSIIFAFASPFAFGTNNIAKLKAALYG 484
>ref|XP_004235134.1| PREDICTED: uncharacterized protein LOC101266103 [Solanum
lycopersicum]
Length = 1140
Score = 99.0 bits (245), Expect(2) = 4e-29
Identities = 79/310 (25%), Positives = 130/310 (41%), Gaps = 15/310 (4%)
Frame = +2
Query: 320 NSLEPGRSIRAKQPLINKVWHSSIPFKI*YLTWRIWKAKLPFEDVISKFGKHLD-SKCYC 496
+S E R RAK + +WH +IPFK L WR + KLP D ++ FG CY
Sbjct: 802 SSREEIREKRAKNHFNSLLWHKNIPFKSSILLWRALRGKLPTNDKLTNFGIEPSICVCYF 861
Query: 497 CSTACDQTLNHVFSQGTTASNIWNQFGAPLGIKHSYLPIRHVINSWWQVREKNDMHKLIL 676
+ D ++ H+F++G A+ +W+ F A GI + +I W +N +K +L
Sbjct: 862 DRSGMD-SIEHIFTKGKFAAAVWSSFAATAGILPDNSSLHALIQQWCAASPRNTENKTLL 920
Query: 677 HITHIIVCWVVWKETCACRYGTQK------KFSRYKMEQQVRWIIQAATNFPGCKLTSHG 838
T I++CW +WK CA + G ++ K++ YK +WI N G L++ G
Sbjct: 921 QATPILICWNLWKNRCAAKCGGKRTNISRVKYAIYK--DNFKWI---KVNTDGNALSNPG 975
Query: 839 KIFATTW*SFNQSQ---GFWWSVGTNQNQAIKLXXXXXXXXXXXXXXXXEWTTDHGFLHI 1009
++ A N + F G N ++
Sbjct: 976 RLGAGGILRDNHGRLVMAFATPTGEGTNNKAEI--------------------------- 1008
Query: 1010 NSVYKSQYWKS*SSLVWRINWCIQNGHTNLIIELDSMVITEMFKDK-----KAGNFRLNR 1174
+ V+ +NW I+ G+ N+I+E+DS ++ K KA NF
Sbjct: 1009 ------------EAPVFGLNWAIELGYRNIILEIDSQLVVHWILKKSQVLDKAKNFL--G 1054
Query: 1175 IIEETSDKLK 1204
++ E + KL+
Sbjct: 1055 VLSEANRKLE 1064
Score = 57.8 bits (138), Expect(2) = 4e-29
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 WKHMLQVREEAEKHMLWQVNSGTSSFWWDN*TCKGPLAHQAPELAKSSKLLVEQFIKQGR 185
W L+ + + ++H+ W++ + SFWWDN GPLAH + S V F ++G+
Sbjct: 696 WGDFLKAKPQVQQHIQWKLQARNCSFWWDNWLGSGPLAHLTSSNNRFSNSKVADFWEEGK 755
Query: 186 WDLDK-LRRTLSNHLCEII 239
W K L +NHL I+
Sbjct: 756 WSWSKLLEHAPANHLSNIL 774