BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013789
         (680 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    51   6e-06
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...    51   6e-06

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/85 (35%), Positives = 43/85 (50%)
 Frame = -1

Query: 269 STFELLLCWKREGLGKKSVKTCWNIIPLTICCTVFD*RTNRIC*GKTRNVLSLKHRCISL 90
           S  E+L CW R+G   K+ K  W I+P  I  T++  R  R   GK  N+  +K  C+ L
Sbjct: 136 SIIEVLQCWNRDGNAGKNEKR-WRIVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCLGL 194

Query: 89  LAFWCKLIVHYVDAMTDLVGDLQSV 15
             FWCK +V         +GD ++V
Sbjct: 195 YYFWCKQVV---------IGDAENV 210


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score = 51.2 bits (121), Expect(2) = 6e-06
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -1

Query: 266 TFELLLCWKREGLGKKSVKTCWNIIPLTICCTVFD*RTNRIC*GKTRNVLSLKHRCISLL 87
           T  +L  W R G   KS K  W +IP  I  +V+  R NR    ++ ++  +K  CI  L
Sbjct: 437 TSNVLKSWVRRG-STKSQKRWWRLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIVSL 495

Query: 86  AFWCK-LIVHYVDAMTDLVGDL 24
            FWCK L +   D + DL+G+L
Sbjct: 496 LFWCKQLCIVDTDQIVDLIGNL 517



 Score = 25.4 bits (54), Expect(2) = 6e-06
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -3

Query: 405 CFTWLVGKEACCHTIQPTQKGLSASHRSILFEDICNV 295
           CFTWLV K AC       +KG     R  L    CN+
Sbjct: 369 CFTWLVIKRACLTQEVLQKKGRQLVPRCFL----CNL 401


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Solanum tuberosum]
          Length = 284

 Score = 51.2 bits (121), Expect(2) = 6e-06
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -1

Query: 266 TFELLLCWKREGLGKKSVKTCWNIIPLTICCTVFD*RTNRIC*GKTRNVLSLKHRCISLL 87
           T  +L  W R G G KS K  W +IP  I  +V+  R +R    ++ ++  +K  CI  L
Sbjct: 204 TSNVLKSWVRRG-GTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSL 262

Query: 86  AFWCK-LIVHYVDAMTDLVGDL 24
            FWCK L +   D + DL+G L
Sbjct: 263 LFWCKQLCIVDTDQIVDLIGSL 284



 Score = 25.4 bits (54), Expect(2) = 6e-06
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -3

Query: 405 CFTWLVGKEACCHTIQPTQKGLSASHRSILFEDICNV 295
           CFTWLV K AC       +KG     R  L    CN+
Sbjct: 136 CFTWLVIKRACLTQEVLQKKGRQLVPRCFL----CNL 168