BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013762
         (567 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]    57   2e-06
ref|XP_002309013.2| hypothetical protein POPTR_0006s07570g [Popu...    57   3e-06
emb|CBI40106.3| unnamed protein product [Vitis vinifera]               57   3e-06

>ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like isoform X1 [Solanum tuberosum]
          Length = 590

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = -2

Query: 482 LKKEAGHSLIEVKGSVKKFTIGNFSNSRIEEIVNVLGTLGCGLDEEIILLDSA 324
           LKKEAGHSLIEVKGSV+KFTIGNF+NSRIEEIVNVLGTLGCG DEEIILLDSA
Sbjct: 538 LKKEAGHSLIEVKGSVEKFTIGNFANSRIEEIVNVLGTLGCGWDEEIILLDSA 590



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 565 EMSKRNLVTWSAMISGYDQDGKHLMAI 485
           EMSKRNLVTWSAMI+GYDQDGKHLMAI
Sbjct: 63  EMSKRNLVTWSAMIAGYDQDGKHLMAI 89


>ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like isoform 1 [Solanum lycopersicum]
           gi|460394471|ref|XP_004242826.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like isoform 2 [Solanum lycopersicum]
          Length = 590

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = -2

Query: 482 LKKEAGHSLIEVKGSVKKFTIGNFSNSRIEEIVNVLGTLGCGLDEEIILLDSA 324
           LKKEAGHSLIEVKGSV+KFTIGNF+NSRIEEIVNVLGTLGCG DEEIILLDSA
Sbjct: 538 LKKEAGHSLIEVKGSVEKFTIGNFANSRIEEIVNVLGTLGCGWDEEIILLDSA 590



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = -3

Query: 565 EMSKRNLVTWSAMISGYDQDGKHLMAI 485
           EMSKRNLVTWSAMI+GYDQDGKHLMA+
Sbjct: 63  EMSKRNLVTWSAMIAGYDQDGKHLMAV 89


>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = -2

Query: 491 GYSLKKEAGHSLIEVKGSVKKFTIGNFSNSRIEEIVNVLGTLGCGLDE 348
           G  LKKE GHSLIEV GSV+KFTIG+F++ RI+EI  +L TL   + E
Sbjct: 535 GSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAVGE 582


>emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
          Length = 730

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = -2

Query: 491 GYSLKKEAGHSLIEVKGSVKKFTIGNFSNSRIEEIVNVLGTLGCGLDEEI 342
           G  LKKE GHSLIEV GSV+KFTIG+F++ RI+EI  +L TL     +++
Sbjct: 503 GSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAFYDQL 552


>ref|XP_002309013.2| hypothetical protein POPTR_0006s07570g [Populus trichocarpa]
           gi|550335720|gb|EEE92536.2| hypothetical protein
           POPTR_0006s07570g [Populus trichocarpa]
          Length = 583

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -2

Query: 533 SHDLW--L*SRW*APHGYSLKKEAGHSLIEVKGSVKKFTIGNFSNSRIEEIVNVLGTL 366
           S ++W  +   W    G  LKKE GHSLIEV G+ +KFT+ +FS+SRIEEI+++L TL
Sbjct: 519 SDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKTL 576


>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -2

Query: 491 GYSLKKEAGHSLIEVKGSVKKFTIGNFSNSRIEEIVNVLGTL 366
           G  LKKE GHSLIEV GSV+KFTIG+F++ RI+EI  +L TL
Sbjct: 535 GSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576