BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013606
         (892 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein A...    57   7e-08

>ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 207

 Score = 57.4 bits (137), Expect(3) = 7e-08
 Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 NLKMRAILQSTSQMLCQANEHIQHCFRDANQVADGLGKYTTDLDQANMSFS-SKCPQPLK 51
           NLK+R I+ +  +++ Q+N  + HCFR++NQVAD L K    L+Q  +  S  + P+  K
Sbjct: 123 NLKLRQIIDNIVEIVDQSNAQVTHCFRESNQVADFLAKRAARLNQMMILTSFRQLPEMAK 182

Query: 50  -AFFLNKCKMSSFRTKY 3
            + FL+KC+M   RTK+
Sbjct: 183 GSSFLDKCQMPCIRTKF 199



 Score = 23.1 bits (48), Expect(3) = 7e-08
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -1

Query: 307 EWCIQNRHTNFILE---MVIVKI*ETK 236
           +WC Q   TNF LE   M+IV +   K
Sbjct: 93  KWCSQQGLTNFTLELDSMIIVNMVNNK 119



 Score = 22.7 bits (47), Expect(3) = 7e-08
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 375 ATSVQDNCSSNNLAEIYETDFELSGASRIGI 283
           A S+   C+SNN+AE    +F     S+ G+
Sbjct: 70  AFSIPVACTSNNMAEALAAEFGGKWCSQQGL 100