BLASTX nr result
ID: Atropa21_contig00013573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00013573
(790 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352275.1| PREDICTED: uncharacterized protein LOC102594... 84 2e-28
ref|XP_004244612.1| PREDICTED: uncharacterized protein LOC101252... 80 2e-27
ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat... 84 6e-14
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor... 82 2e-13
gb|AHG94965.1| mitochondrial PPR protein [Nicotiana tomentosifor... 82 2e-13
gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosifor... 82 3e-13
ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat... 80 6e-13
ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat... 79 1e-12
ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat... 77 5e-12
ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat... 77 9e-12
ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containi... 74 6e-11
ref|XP_006344061.1| PREDICTED: putative pentatricopeptide repeat... 73 1e-10
ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat... 72 2e-10
ref|XP_006366333.1| PREDICTED: pentatricopeptide repeat-containi... 68 4e-09
gb|AAM52339.1| fertility restorer [Petunia x hybrida] 68 4e-09
ref|XP_006366332.1| PREDICTED: putative pentatricopeptide repeat... 66 2e-08
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 66 2e-08
gb|AHG94966.1| mitochondrial PPR protein [Nicotiana tomentosifor... 65 2e-08
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida] 65 3e-08
ref|XP_002272722.2| PREDICTED: uncharacterized protein LOC100264... 42 3e-07
>ref|XP_006352275.1| PREDICTED: uncharacterized protein LOC102594579 [Solanum tuberosum]
Length = 1001
Score = 83.6 bits (205), Expect(2) = 2e-28
Identities = 42/62 (67%), Positives = 46/62 (74%), Gaps = 5/62 (8%)
Frame = +2
Query: 452 VINDPSIKSSP-----NDTQVHSHSAETPAPKISRFEVRHTFHYLPNLNHPXXXXXXAPA 616
VI+DPSIKSS NDTQVHSHSA+T APKI R EVRHTFH+LPN NHP APA
Sbjct: 131 VIDDPSIKSSTPISAANDTQVHSHSAQTSAPKIPRSEVRHTFHHLPNPNHPQQQQQQAPA 190
Query: 617 VP 622
+P
Sbjct: 191 IP 192
Score = 69.3 bits (168), Expect(2) = 2e-28
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +1
Query: 625 HQGTRYTTEEMKVPEPQPPPQLVRMHSVTMAQPVAY 732
HQG RY EEMKVPEPQPPPQLVRMHS TMAQPV Y
Sbjct: 195 HQGARYIPEEMKVPEPQPPPQLVRMHSATMAQPVDY 230
>ref|XP_004244612.1| PREDICTED: uncharacterized protein LOC101252905 [Solanum
lycopersicum]
Length = 1000
Score = 80.5 bits (197), Expect(2) = 2e-27
Identities = 43/62 (69%), Positives = 46/62 (74%), Gaps = 5/62 (8%)
Frame = +2
Query: 452 VINDPSIKSSP-----NDTQVHSHSAETPAPKISRFEVRHTFHYLPNLNHPXXXXXXAPA 616
VI+DPSIKSS NDTQVH HSA+TPAPKI R EVRHTFH+LPN NHP APA
Sbjct: 131 VIDDPSIKSSTPISTVNDTQVHIHSAQTPAPKIPRSEVRHTFHHLPNPNHP-QQQQQAPA 189
Query: 617 VP 622
VP
Sbjct: 190 VP 191
Score = 69.3 bits (168), Expect(2) = 2e-27
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +1
Query: 625 HQGTRYTTEEMKVPEPQPPPQLVRMHSVTMAQPVAY 732
HQG RY EEMKVPEPQPPPQLVRMHS TMAQPV Y
Sbjct: 194 HQGARYIPEEMKVPEPQPPPQLVRMHSATMAQPVDY 229
>ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565401693|ref|XP_006366330.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum]
Length = 590
Score = 84.0 bits (206), Expect = 6e-14
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
SRISEMTTF KEM GRGFSFDA+T ELLV I ENP VLDMIPELH++NKK
Sbjct: 540 SRISEMTTFTKEMTGRGFSFDASTTELLVNIIMENPFVLDMIPELHLKNKK 590
>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
+RISEM MKEMAGRGFSFDATT ELL+ I ENPSVLDMIPELH++NK+
Sbjct: 545 NRISEMAILMKEMAGRGFSFDATTTELLINVIRENPSVLDMIPELHLKNKQ 595
>gb|AHG94965.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 591
Score = 82.0 bits (201), Expect = 2e-13
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
SRISEM TFMKEMAGRGFSFDATT LV I ENPSVLDMIPE H++ KK
Sbjct: 541 SRISEMRTFMKEMAGRGFSFDATTTGFLVNVIGENPSVLDMIPEFHLKTKK 591
>gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 81.6 bits (200), Expect = 3e-13
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = -2
Query: 150 RISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENK 4
RISEM MKEMAGRGFSFDATT ELL+ I ENPSVLDMIPELH++NK
Sbjct: 546 RISEMAILMKEMAGRGFSFDATTTELLINVIRENPSVLDMIPELHLKNK 594
>ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 655
Score = 80.5 bits (197), Expect = 6e-13
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -2
Query: 150 RISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
+I+EM TFM EM G GFSFDATTA+LLVK ISENPS+LDM+PELH E KK
Sbjct: 606 KINEMVTFMNEMTGTGFSFDATTAKLLVKEISENPSILDMLPELHAEIKK 655
>ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 588
Score = 79.3 bits (194), Expect = 1e-12
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
++ISEMT+FMKEM GRGFSFDATT ELLVK I +NPSVL MIPELH KK
Sbjct: 538 NKISEMTSFMKEMVGRGFSFDATTTELLVKIIRKNPSVLHMIPELHSGKKK 588
>ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 590
Score = 77.4 bits (189), Expect = 5e-12
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
++ISEM +FMKEM GRGFSFDATT L+ + ENPSVLDMIPELH +NKK
Sbjct: 540 NKISEMASFMKEMDGRGFSFDATTTGFLIDVVRENPSVLDMIPELHSKNKK 590
>ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 589
Score = 76.6 bits (187), Expect = 9e-12
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -2
Query: 150 RISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENK 4
+I+EM TFM EM GRGFSFDATTA+LLVK ISEN S+L+MIP+LH E K
Sbjct: 541 KINEMVTFMNEMTGRGFSFDATTAKLLVKEISENTSILEMIPKLHTEKK 589
>ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Solanum lycopersicum]
Length = 590
Score = 73.9 bits (180), Expect = 6e-11
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = -2
Query: 150 RISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
+ISEM +FMKEM GRGFSFDA T LLV A+ NPSVLDMIPELH ++KK
Sbjct: 541 KISEMASFMKEMDGRGFSFDAGTTALLVNAVRVNPSVLDMIPELHSKSKK 590
>ref|XP_006344061.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565354324|ref|XP_006344062.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum] gi|565354326|ref|XP_006344063.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X3 [Solanum
tuberosum] gi|565354328|ref|XP_006344064.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X4 [Solanum
tuberosum]
Length = 593
Score = 72.8 bits (177), Expect = 1e-10
Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 7/62 (11%)
Frame = -2
Query: 180 PNVN*SNIL-------SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPE 22
PN+ N+L S+I+EMTTFMKEM GRGFSFDATT LLV + E+PSVLDMI E
Sbjct: 527 PNIFTYNVLVRGFLRCSKITEMTTFMKEMTGRGFSFDATTTGLLVNVLRESPSVLDMILE 586
Query: 21 LH 16
LH
Sbjct: 587 LH 588
>ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 592
Score = 72.0 bits (175), Expect = 2e-10
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = -2
Query: 150 RISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELH 16
+I+EMTTFMKEM GRGFSFDATT ELLV + E+PSVLDMI +LH
Sbjct: 543 KITEMTTFMKEMTGRGFSFDATTTELLVNVLRESPSVLDMILDLH 587
>ref|XP_006366333.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Solanum tuberosum]
Length = 476
Score = 67.8 bits (164), Expect = 4e-09
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -2
Query: 150 RISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
+I+EM T+MKEM +GFS DA T ELLV I ENPSVLDMIPE E+KK
Sbjct: 427 KINEMATYMKEMVRKGFSCDADTTELLVNVIRENPSVLDMIPEFRSEHKK 476
>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 67.8 bits (164), Expect = 4e-09
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
S++SEM F+KE+AG+ FSF+A T ELL+ I+E+PS+L+MIPE H +NKK
Sbjct: 542 SKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHRDNKK 592
>ref|XP_006366332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 592
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
++I+EM FMKEM +GFS DA T ELLV I ENPSVLDMIPE E KK
Sbjct: 542 NKINEMAIFMKEMVRKGFSCDADTTELLVNVIRENPSVLDMIPEFRSEYKK 592
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 65.9 bits (159), Expect = 2e-08
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPE 22
++ISE+ +FMKEMAGRGFSFDATT +L+ + ENPS++DMIP+
Sbjct: 532 NKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMIPD 575
>gb|AHG94966.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 479
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
++ISEM F++ M + FS DATT ELL+ I+E+PS+LDMIPE H+ENKK
Sbjct: 429 NKISEMKAFLRVMTVKSFSSDATTVELLIDIIAEDPSLLDMIPEFHLENKK 479
>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 65.1 bits (157), Expect = 3e-08
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -2
Query: 153 SRISEMTTFMKEMAGRGFSFDATTAELLVKAISENPSVLDMIPELHVENKK 1
+++SEM F++E+AG+ FSF+A T ELL+ I+E+PS+L+MIPE H +NKK
Sbjct: 542 NKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHRDNKK 592
>ref|XP_002272722.2| PREDICTED: uncharacterized protein LOC100264973 [Vitis vinifera]
Length = 988
Score = 41.6 bits (96), Expect(2) = 3e-07
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 464 PSIKSSPNDTQV-HSHSAETPAPKIS-RFEVRHTFHYLPNLNHP 589
PS++S+ D + H + P P S + E RHTFH+LPN NHP
Sbjct: 142 PSVESTHKDASLTHDQTVPNPVPTGSEKAEARHTFHHLPNPNHP 185
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 622 MHQGTRYTTEEMKVPEPQPPPQLVRMHSVTMAQPVAY 732
+HQ T+Y +EMK EPQPP +LVRM+S + AQPV +
Sbjct: 196 VHQATKYGVDEMK-SEPQPP-KLVRMYSSSPAQPVDF 230