BLASTX nr result

ID: Atropa21_contig00013463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013463
         (897 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245260.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-11
ref|XP_006356647.1| PREDICTED: pentatricopeptide repeat-containi...    75   3e-11

>ref|XP_004245260.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Solanum lycopersicum]
          Length = 629

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +2

Query: 755 MDGFRKERPNCETSRKKSGMRTLIRKDWLHASPIKEKDLDNKMPLRP 895
           MD FRKER NCE SR+KSGM+TLIRK++LH   IKEKDL++KMPLRP
Sbjct: 1   MDDFRKERSNCENSRRKSGMKTLIRKEFLHPFSIKEKDLEDKMPLRP 47


>ref|XP_006356647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X1 [Solanum tuberosum]
           gi|565380524|ref|XP_006356648.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Solanum tuberosum]
          Length = 629

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = +2

Query: 755 MDGFRKERPNCETSRKKSGMRTLIRKDWLHASPIKEKDLDNKMPLRP 895
           MD FRKER NCE SR+KSGM+TLIRK+ LH   IKEKDLD+KMPL+P
Sbjct: 1   MDDFRKERSNCEKSRRKSGMKTLIRKELLHPFSIKEKDLDDKMPLQP 47


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