BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013363
         (5002 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   123   6e-58
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   136   1e-53
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   115   5e-49
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   124   7e-48
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       134   3e-45
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   122   1e-44
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             100   8e-44
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   121   3e-43
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    92   1e-41
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   128   1e-41
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           128   1e-41
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   110   2e-41
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   123   7e-41
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               119   9e-41
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   106   1e-40
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                110   3e-40
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               110   7e-40
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   110   2e-38
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   101   4e-37
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    99   1e-35

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  123 bits (309), Expect(3) = 6e-58
 Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 6/337 (1%)
 Frame = +2

Query: 2678 ESHNNLFDPYSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NG 2857
            ++  +L    +  ++ +A+  I  +K+   DGF + FF+ +   +  +I   + EF  N 
Sbjct: 429  QAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNS 488

Query: 2858 KLLKQLNATIITWRLPLHWRLGSLDQYVVAM*C------INEYLRYCVKG*RVYYLR*LM 3019
            ++ + +N  ++T  LP       + ++     C      I++ L   +KG     +    
Sbjct: 489  RMHRPINCIVVTL-LPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVN--E 545

Query: 3020 TQTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEMNIWIF 3199
             Q+ F+ G  +  N+L+   ++R   R + S RC+MK+D+RKAY+ V    LE + ++ F
Sbjct: 546  AQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETL-LYEF 604

Query: 3200 WKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFD 3379
                       +P                          + VS   ++V  NG     F 
Sbjct: 605  ----------GFPSRFVGW------------------IMECVSTVSYSVLVNGIPTQPFQ 636

Query: 3380 GKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISC 3559
             ++ LRQ +P+SP LF + M+Y SR +  +   PD+ FH    R  +THL+FADDL++ C
Sbjct: 637  ARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFC 696

Query: 3560 KENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            + +  S+  +  A + FS   GL A+ +KSN++  GV
Sbjct: 697  RADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGV 733



 Score =  111 bits (277), Expect(3) = 6e-58
 Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 5/253 (1%)
 Frame = +1

Query: 3652 YVCGRGDAMTKDMVL*LTDFT---IRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTA 3822
            Y CG  D   ++    L D+    +   P RYL +PL+ +K    +C  L   I  +   
Sbjct: 729  YFCGVDDETARE----LADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQT 784

Query: 3823 RSARHLSYASRLQVINSLLFSMHNF*GGVYPPSKCFKDNL*EM*R--ILVGSSEEKKKVS 3996
              A+ LSYA RLQ+I S+L SM N+   ++P SK     + ++ R  +  G +EE KK  
Sbjct: 785  WMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAP 844

Query: 3997 LVVWETICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFW 4176
             V W TI +P+++ G N+   + WN   + KL+W I  K D + V+W+H  Y+K      
Sbjct: 845  -VAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILT 903

Query: 4177 NHIAYGDCSWY*RRIKKLKLGMTSWYNNRGYCLTANEKYSVSKGYLKLLRDSPNAEVADL 4356
             +I+    +W  R+I K +  +++  +    C+   +K+S+ K Y K+  +        L
Sbjct: 904  VNIS-NQTTWILRKIVKARDHLSNIGDWDEICI--GDKFSMKKAYKKISENGERVRWRRL 960

Query: 4357 IWSRFLLPKHMFM 4395
            I + +  PK  F+
Sbjct: 961  ICNNYATPKSKFI 973



 Score = 41.6 bits (96), Expect(3) = 6e-58
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +3

Query: 4395 VWLAKQDRLLTKDKMLTMGIQCNDINYGLCL-DGWPENTLHLFYYCTWIRELWELV 4559
            +W+   +RL T D++   G+QC D+NY LC  DG  E   HLF+ C++   +W  +
Sbjct: 974  LWMMLHERLPTVDRISRWGVQC-DLNYRLCRNDG--ETIQHLFFSCSYSAGVWSKI 1026



 Score = 75.9 bits (185), Expect(2) = 3e-14
 Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1789 P*IVLSDFNSVLHMEDKMGGNHVTLTEVVDLQTCLNQSGLAELPNSCCSYTW-NDKQDNV 1965
            P I++ DFN+V H  D++ G  VT  E  D Q  L QS L E  ++   Y+W N      
Sbjct: 131  PMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRSTWSYYSWSNSSIGRD 190

Query: 1966 RVYFRIDGAFVNGEWLDNVKACRSKFLHEGVSDHSPLQVILIQGANKKKRAFKYWNM 2136
            RV  RID A+VN  WL        ++L  G+SDHSPL   L+ G  +  + FK+ N+
Sbjct: 191  RVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDHSPLLFNLMTGRPQGGKPFKFMNV 247



 Score = 32.7 bits (73), Expect(2) = 3e-14
 Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = +3

Query: 2235 VEHKLIDLQSKHFSNIIQKAATDRENL--LRSQEMLQQNPLDEDL*KKEKVTRVKLKRSN 2408
            V+ +L  ++++      +K    R  L  L+SQ+    N + +      K     L+  +
Sbjct: 281  VKRELKQMKTQKIGLAHEKVKNLRHQLQDLQSQDDFDHNDIMQT---DAKSIMNDLRHWS 337

Query: 2409 YMAEIFSKQRSKATWIRLRDDNTRYFFSVIKHKKLIQPVTQL 2534
            ++ +   +Q+S+ TW++  D N++ FF+ +K +  I  +  L
Sbjct: 338  HIEDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDML 379


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  136 bits (342), Expect(3) = 1e-53
 Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 13/339 (3%)
 Frame = +2

Query: 2693 LFDPYSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQ 2872
            L  P +  ++  A+  I+  K+   DGF S FF+ +  ++  +I E +L+F  NG + K 
Sbjct: 437  LVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKP 496

Query: 2873 LNATIITWRLPLHWRLGSLDQYVVAM*CINEYLRYCVKG*RVYYLR*LMT------QTTF 3034
            +N T +T    +     + D   +A  C +   +   K      L+ ++T      QT F
Sbjct: 497  INCTAVTLIPKIDEAKHAKDYRPIA--CCSTLYKIISKI-LTKRLQAVITEVVDCAQTGF 553

Query: 3035 VQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEM-------NIW 3193
            +    +  N+L+   ++R  NR + S RC++K+D+RKAY+ V    LE M       +++
Sbjct: 554  IPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMF 613

Query: 3194 IFWKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGY 3373
            I W                                        V    +++  NG     
Sbjct: 614  IRW------------------------------------IMACVKTVSYSILLNGIPSIP 637

Query: 3374 FDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMI 3553
            FD ++ LRQ +P+SP LF + M+Y SR M NM + P++ FH    R KLTHL+FADDL++
Sbjct: 638  FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697

Query: 3554 SCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
              + +  S+ ++M A   FS   GL+A+++KS ++  GV
Sbjct: 698  FARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGV 736



 Score = 98.6 bits (244), Expect(3) = 1e-53
 Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
 Frame = +1

Query: 3715 IRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSMHN 3894
            I + P RYL +PL+ +K    +C  L  KI  +     A  LSYA RLQ++ ++L+SM N
Sbjct: 752  IGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQN 811

Query: 3895 F*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEVWN 4071
            + G ++P P K  K       + L   + +    + V W+ + +P++  GLN+    +WN
Sbjct: 812  YWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWN 871

Query: 4072 MVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLKLGMTSW 4251
               + KL+W I  K D + V+WV+  Y+K      N     + SW  R+I + +  +T  
Sbjct: 872  KAAILKLLWAITFKQDKLWVRWVNAYYIKR-QNIENVTVSSNTSWILRKIFESRELLT-- 928

Query: 4252 YNNRGYCLTANE-KYSVSKGYLKLLRDSPNAEVADLIWSRFLLPKHMFM 4395
                G+   +N   +S+ K Y  L  D  N     LI +    PK  F+
Sbjct: 929  -RTGGWEAVSNHMNFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFI 976



 Score = 27.3 bits (59), Expect(3) = 1e-53
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 4374 SP*THVHVWLAKQDRLLTKDKMLTMGIQCNDINYGLCLDGWPENTL-HLFYYCTWIRELW 4550
            +P +   +WLA  +RL T +++        D++    + G    T+ HLF+ C + +E+W
Sbjct: 970  TPKSQFILWLAMLNRLATAERVSRWN---RDVSPLCKMCGNEIETIQHLFFNCIYSKEIW 1026

Query: 4551 ELVTQWTCIKRQYQVLAATLLKI 4619
              V  +  ++ Q    A   L I
Sbjct: 1027 GKVLLYLNLQPQADAQAKKELAI 1049



 Score = 73.2 bits (178), Expect(2) = 3e-16
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1786 QP*IVLSDFNSVLHMEDKMGGNHVTLTEVVDLQTCLNQSGLAELPNSCCSYTWNDKQDNV 1965
            +P I++ D+N+V   +D++ GN V+  E  DL++ + ++ L E P +   Y+WN+K    
Sbjct: 133  EPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQLLEAPTTGLFYSWNNKSIGA 192

Query: 1966 -RVYFRIDGAFVNGEWLDNVKACRSKFLHEGVSDHSPLQVILIQGANKKKRAFKYWN 2133
             R+  RID +FVN  W++       ++   G+SDHSPL   L    ++  R FK+ N
Sbjct: 193  DRISSRIDKSFVNVAWINQYPDVVVEYREAGISDHSPLIFNLATQHDEGGRPFKFLN 249



 Score = 42.4 bits (98), Expect(2) = 3e-16
 Identities = 28/101 (27%), Positives = 51/101 (50%)
 Frame = +3

Query: 2235 VEHKLIDLQSKHFSNIIQKAATDRENLLRSQEMLQQNPLDEDL*KKEKVTRVKLKRSNYM 2414
            V+  L    SK FS    +    R  L   Q + + + + E L ++EK    +L++ + +
Sbjct: 284  VKRALKSFHSKKFSKAHCQVEELRRKLAAVQALPEVSQVSE-LQEEEKDLIAQLRKWSTI 342

Query: 2415 AEIFSKQRSKATWIRLRDDNTRYFFSVIKHKKLIQPVTQLK 2537
             E   KQ+S+  W+ L D N+++FF+ IK +K    +  L+
Sbjct: 343  DESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQ 383


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  115 bits (289), Expect(3) = 5e-49
 Identities = 75/248 (30%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
 Frame = +1

Query: 3658 CGRGDAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSV-KIIKKVTARSAR 3834
            CG  D   K+ +L ++ F     P RYL +PLS +K + I+ +Q+ + KI+ ++T  SA 
Sbjct: 558  CGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKK-LNIKHYQVLIDKIVGRITHWSAG 616

Query: 3835 HLSYASRLQVINSLLFSMHNF*GGVYPPSKCFKDNL*EM*R--ILVGSSEEKKKVSLVVW 4008
             LSYA R+Q+I S++F+  NF     P  K     +  + R  + +G+S   +K S + W
Sbjct: 617  LLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRK-SPIAW 675

Query: 4009 ETICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIA 4188
            E +C P+   GLNI    +WN + + KL+W +  K DN+ +KW+H  Y++ G + W+ + 
Sbjct: 676  EKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIR-GQSIWSMVL 734

Query: 4189 YGDCSWY*RRIKKLKLGMTSWYNNRGYCLTANEKYSVSKGYLKLLRDSPNAEVADLIWSR 4368
                SW    + KL+  +   Y +R       + + + K YL L  +S       L+ + 
Sbjct: 735  KKSHSWIMSSMMKLR-PLLLQYQSR-----MQDVFKMKKIYLALFEESEKMSWRTLMCNN 788

Query: 4369 FLLPKHMF 4392
               P+ +F
Sbjct: 789  LARPRALF 796



 Score = 94.0 bits (232), Expect(3) = 5e-49
 Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 6/222 (2%)
 Frame = +2

Query: 3023 QTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEMNIWIFW 3202
            Q  FV G  L  +V++   ++R   R + + +C+++ID++KAY+ V    LE +      
Sbjct: 375  QAAFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHI------ 428

Query: 3203 KIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*--FKKYVSFTKFTVKFNGDGHGYF 3376
                                         +   GF   F K++     +V +  + +G F
Sbjct: 429  -----------------------------LRELGFPDQFIKWIMIAVRSVTYVFNINGRF 459

Query: 3377 ----DGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADD 3544
                + +R +RQ +PISPLLF++VM+Y +RI++ + ++P++ +HS   + K+T+L FADD
Sbjct: 460  TRRLEARRGIRQGDPISPLLFILVMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADD 519

Query: 3545 LMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            L++  + ++ SV  +++    F    GL  N  K N++   V
Sbjct: 520  LLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSV 561



 Score = 36.6 bits (83), Expect(3) = 5e-49
 Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
 Frame = +3

Query: 4395 VWLAKQDRLLTKDKMLTMGIQCNDINYGLCLDGWPENTLHLFYYCTWIRELWELVTQWTC 4574
            +W A   RL +KD+++  G+   D N   C     E+  HLF+ C  ++ +W  V  W  
Sbjct: 798  LWQACHFRLASKDRLIKFGLNV-DANCAFCSS--MESHEHLFFGCIELKTIWTAVLNWLQ 854

Query: 4575 IKRQYQVLAATL----LKINGRDWINY*KEDYDCCL*NWHLSDMDGKRKQFRDH-----N 4727
            I       +  L     K  G+ W           L     ++       +R+H     N
Sbjct: 855  IIHMPSTWSEELNWITRKCKGKGW--------RAMLLKCAFTETIYHIWAYRNHRVFGGN 906

Query: 4728 VNNNFVLQQIQNTVKERV 4781
            VNN  V   I NT+  RV
Sbjct: 907  VNNRKVEDSIINTIIYRV 924



 Score = 70.9 bits (172), Expect = 6e-09
 Identities = 41/115 (35%), Positives = 62/115 (53%)
 Frame = +1

Query: 1789 P*IVLSDFNSVLHMEDKMGGNHVTLTEVVDLQTCLNQSGLAELPNSCCSYTWNDKQDNVR 1968
            P  +L DFN+VL  ED++GG  VT +E VDL+  +++ GL E+      +TW +KQ +  
Sbjct: 80   PWCLLGDFNNVLKAEDRIGGRDVTESEYVDLREMMSRVGLYEMDTCGDFFTWTNKQADNT 139

Query: 1969 VYFRIDGAFVNGEWLDNVKACRSKFLHEGVSDHSPLQVILIQGANKKKRAFKYWN 2133
            +Y RID    N  WL        K L   VSDH+ + +     +++ +  FKY N
Sbjct: 140  IYSRIDRFLGNLNWLQMHIDSTLKILAPSVSDHALMFLSCKDQSSRLRGRFKYRN 194


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  124 bits (310), Expect(2) = 7e-48
 Identities = 98/342 (28%), Positives = 164/342 (47%), Gaps = 15/342 (4%)
 Frame = +2

Query: 2690 NLFDPYSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDI-SEAMLEFL*NGKLL 2866
            +L + ++ +D++    S+N NKS  PDGF   FF+ A  ++GD++ + A+ EF   G LL
Sbjct: 268  SLCNEFTHDDIRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLL 327

Query: 2867 KQLNATIITWRLPLHWRLGSLDQYVVAM*C------INEYLRYCVKG*RVYYLR*LMTQT 3028
             +LN+TIIT  +P      ++  +     C      I + L   +KG    +L    +Q+
Sbjct: 328  MELNSTIITL-VPKVANPTTMSDFRPISCCNTFYKIIAKLLANRLKG--TLHLIVGPSQS 384

Query: 3029 TFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR----SKVLEEMNI-- 3190
            TF+ G  +  N+L+   ++   ++ +   RC   +D+ KA + V        L+  NI  
Sbjct: 385  TFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPS 444

Query: 3191 -WIFWKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGH 3367
              I W                                     K  +S  KF+V  NG+  
Sbjct: 445  TLIGW------------------------------------IKSCISSAKFSVCVNGELA 468

Query: 3368 GYFDGKRELRQDNPISPLLFVMVMDYFSR-IMTNMGQLPDYRFHSMYNRQKLTHLIFADD 3544
            G+F  +R LRQ +P+SP LFV+ M+  S  I   +   P +R+H   ++  L+HL FADD
Sbjct: 469  GFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADD 528

Query: 3545 LMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            L++ C  +  SV  + +A  +F  +  L+AN+ +S +F+AGV
Sbjct: 529  LLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGV 570



 Score = 97.8 bits (242), Expect(2) = 7e-48
 Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
 Frame = +1

Query: 3670 DAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYA 3849
            D  + D VL +T+F++ T P+RYL +PL   K    +C  L  +I  ++ +   + LS+A
Sbjct: 571  DGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFA 630

Query: 3850 SRLQVINSLLFSMHNF*GG-VYPPSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKP 4026
             RLQ+I S+L S+  +    +  P K  KD    +   L   +   +  + V W  IC P
Sbjct: 631  GRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLP 690

Query: 4027 RTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSW 4206
            + + GL IK    WN   +   IW ++    N    WV ++Y+  G +FWN      CSW
Sbjct: 691  KCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWV-KVYLLKGNSFWNAPLPSICSW 749

Query: 4207 Y*RRIKKLKLGMTSWYNN 4260
              R++ K++    S++ N
Sbjct: 750  NWRKLLKIRELCCSFFVN 767


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  134 bits (336), Expect(2) = 3e-45
 Identities = 100/329 (30%), Positives = 161/329 (48%), Gaps = 5/329 (1%)
 Frame = +2

Query: 2705 YSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNAT 2884
            +S  D++ A+ S+  NKS  PDGF + FF D+ +IVG ++++A+ EF  +G LLKQ NAT
Sbjct: 447  FSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNAT 506

Query: 2885 IITWRLPLHWRLGSLDQYVVAM*CINEYLRYCVKG*RVYYLR*LM-----TQTTFVQGMS 3049
             I     +     + D   ++  C+N   +   +       R L       Q+ F+ G S
Sbjct: 507  TIVLIPKIVNPTCTSDFRPIS--CLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRS 564

Query: 3050 LVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEMNIWIFWKIHLS**WH 3229
            L  NVL+  +++   N +N S R ++K+DL+KA++ VR         W F    L     
Sbjct: 565  LAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVR---------WEFVIAALR--AL 613

Query: 3230 AYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDGKRELRQDNP 3409
            A P                          + +S   FTV  NG   G+F   + LRQ +P
Sbjct: 614  AIPEKFINW------------------ISQCISTPTFTVSINGGNGGFFKSTKGLRQGDP 655

Query: 3410 ISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKENVCSV*RV 3589
            +SP LFV+ M+ FS ++ +  +     +H   +   ++HL+FADD+MI       S+  +
Sbjct: 656  LSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGI 715

Query: 3590 MEALKHFSVVYGLEANLDKSNMFVAGVMQ 3676
             E L  F+   GL+ N DKS++++AG+ Q
Sbjct: 716  CETLDDFASWSGLKVNKDKSHLYLAGLNQ 744



 Score = 79.0 bits (193), Expect(2) = 3e-45
 Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F I T PIRYL LPL   K    E   L  KI  +  +   + LS+A R+Q+I+S++F  
Sbjct: 755  FPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGS 814

Query: 3889 HNF*GGVY-PPSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P  C K       R L   + E+ K   V W  +C P+++ GL ++    
Sbjct: 815  INFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLE 874

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLK 4233
            WN     +LIW +    D++   W H  ++  G +FW        SW  +R+  L+
Sbjct: 875  WNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRG-SFWAVEGGQSDSWTWKRLLSLR 929


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  122 bits (307), Expect(2) = 1e-44
 Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 8/343 (2%)
 Frame = +2

Query: 2666 FRLTESHNNLFDP-YSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLE 2842
            F+  E+   L +   S+ D+K    ++  NKS  PDG+ S FF+   +IVG  +  A+ E
Sbjct: 432  FKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQE 491

Query: 2843 FL*NGKLLKQLNATIITWRLPLHWRLGSLDQYVVAM*C------INEYLRYCVKG*RVYY 3004
            F  +G+LL Q N+T +T  +P       + ++     C      I++ L   ++     +
Sbjct: 492  FFRSGRLLGQWNSTAVTM-VPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLW 550

Query: 3005 LR*LMTQTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR-SKVLEE 3181
            +    +Q+ FV+G  L  NVL+   +++   + N S+R ++K+DLRKA++ V    ++E 
Sbjct: 551  IS--PSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIET 608

Query: 3182 MNIWIFWKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGD 3361
            +              +A P                         K+ ++ T F++  +G 
Sbjct: 609  LKAA-----------NAPPRFVNW-------------------IKQCITSTSFSINVSGS 638

Query: 3362 GHGYFDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFAD 3541
              GYF G + LRQ +P+SP LFV+ M+  SR++ N        +H   +  +++ L FAD
Sbjct: 639  LCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFAD 698

Query: 3542 DLMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            DLMI       S+  +   L+ F  + GLE N +KS ++ AG+
Sbjct: 699  DLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGL 741



 Score = 87.8 bits (216), Expect(2) = 1e-44
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
 Frame = +1

Query: 3652 YVCGRGDAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSA 3831
            Y  G  D   +D +     F   TFP RYL LPL   K  + +  QL  KI  +    + 
Sbjct: 737  YTAGLEDTDKEDTLA--FGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWAT 794

Query: 3832 RHLSYASRLQVINSLLFSMHNF*GGVYPPSKCFKDNL*EM-*RILVGSSEEKKKVSLVVW 4008
            + LS+A RLQ+I+S+++S  NF    +   KC    + +M  R L G+   ++    V W
Sbjct: 795  KTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSW 854

Query: 4009 ETICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIA 4188
            +  C P+ + GL ++    WN     +LIWM+  + D++ V W H   +++ + FWN  A
Sbjct: 855  QNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRH-VNFWNAEA 913

Query: 4189 YGDCSWY*RRIKKLK 4233
                SW  + I  L+
Sbjct: 914  ASHHSWIWKAILGLR 928



 Score = 53.1 bits (126), Expect(2) = 7e-07
 Identities = 34/116 (29%), Positives = 50/116 (43%)
 Frame = +1

Query: 1786 QP*IVLSDFNSVLHMEDKMGGNHVTLTEVVDLQTCLNQSGLAELPNSCCSYTWNDKQDNV 1965
            +P I+L DFN  L   D   G       + + + CL  S +++LP     YTW + Q+N 
Sbjct: 136  KPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTWWNNQENN 195

Query: 1966 RVYFRIDGAFVNGEWLDNVKACRSKFLHEGVSDHSPLQVILIQGANKKKRAFKYWN 2133
             +  +ID   VN  WL         F     SDH P  V +   +  + + FK  N
Sbjct: 196  PIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLSN 251



 Score = 30.4 bits (67), Expect(2) = 7e-07
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
 Frame = +3

Query: 2142 YHPQFKEIVRL-FGN*R*MDVRCFXXXXXXXXVEHKLIDLQSKHFSNIIQKAATDRENLL 2318
            +HP+F E +R+ +          F        ++  +     +H+S + ++     +NL 
Sbjct: 255  HHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLK 314

Query: 2319 RSQEMLQQNPLDEDL*KKEKVTRVKLKRSNYMAEIFSKQRSKATWIRLRDDNTRYFFSVI 2498
              Q  L   P    L   EK             E F  Q+S+  W++  D NT +F  ++
Sbjct: 315  TCQNNLLAAP-SSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLKCGDSNTTFFHRMM 373

Query: 2499 KHKKLIQPVTQL 2534
              ++ I  +  L
Sbjct: 374  TARRAINEIHYL 385


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  100 bits (249), Expect(3) = 8e-44
 Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
 Frame = +2

Query: 3023 QTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEMNIWIFW 3202
            QT FV+   L+ N+L+   +++  ++ + S+RC +KID+ KA+N V+         W F 
Sbjct: 89   QTAFVKDRLLIENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQ---------WSFI 139

Query: 3203 K-IHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFD 3379
            + I LS     +P                            +S   F+V+ NG+  G+F 
Sbjct: 140  RNILLS---MDFPMEFVHWIMLC------------------ISTASFSVQVNGELVGFFQ 178

Query: 3380 GKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISC 3559
             KR LRQ   +SP LFVM MD  S+++        + +HS      LTHL FADDLM+  
Sbjct: 179  SKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLS 238

Query: 3560 KENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGVMQ 3676
               V S+  ++E    F+   GL+ +++KS +++AGV +
Sbjct: 239  DGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTE 277



 Score = 82.0 bits (201), Expect(3) = 8e-44
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F +   P+RYL LPL  ++    +   L   I KK+   + R+LSYA RL +I S+L+S+
Sbjct: 289  FDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSI 348

Query: 3889 HNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P +C ++        L    +   + + V W  +CKP+ + GL ++  + 
Sbjct: 349  CNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKE 408

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWN 4179
             N V   KLIW I+   +++ V+W+ +  +K+   FW+
Sbjct: 409  MNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHD-TFWS 445



 Score = 46.2 bits (108), Expect(3) = 8e-44
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +1

Query: 2917 VGQFRPICCCNVVYK*ISKILCKRLKSVLPSLV 3015
            +  +RP+ CCNV+YK ISKI+  RLK VLP  +
Sbjct: 53   ISHYRPLSCCNVIYKIISKIIANRLKMVLPKFI 85


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  121 bits (303), Expect(2) = 3e-43
 Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 14/349 (4%)
 Frame = +2

Query: 2666 FRLTES-HNNLFDPYSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLE 2842
            FR +E  H  L    +  ++K  + S+  +KS  PDG+ S F++ +  I+GD++  A+  
Sbjct: 160  FRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQS 219

Query: 2843 FL*NGKLLKQLNATIITWRLPLHWRLGSLDQYVVAM*C------INEYLRYCVKG*RVYY 3004
            F   G L K +N+TI+   +P       +  Y     C      I++ L   +K  R+  
Sbjct: 220  FFAKGFLPKGVNSTILAL-IPKKKEAREIKDYRPISCCNVLYKAISKILANRLK--RILP 276

Query: 3005 LR*LMTQTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR----SKV 3172
               +  Q+ FV+   L+ NVL+   +++  ++ + S RC MKID+ KA++ ++    + V
Sbjct: 277  KFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHV 336

Query: 3173 LEEMNI---WIFWKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFT 3343
            L  MN    +I W                                        +S   F+
Sbjct: 337  LAAMNFPGEFIHW------------------------------------ISLCMSTASFS 360

Query: 3344 VKFNGDGHGYFDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLT 3523
            ++ NG+  GYF   R LRQ   +SP LFV+ MD  SR++       ++ +H       LT
Sbjct: 361  IQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLT 420

Query: 3524 HLIFADDLMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            HL FADDLMI     + SV  +++ L  F+   GL+  ++K+ +++AGV
Sbjct: 421  HLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGV 469



 Score = 85.1 bits (209), Expect(2) = 3e-43
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F +   P+RYL LPL  ++    +   L  +I +++   ++R+LS+A RL +INS+L+S+
Sbjct: 483  FGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSI 542

Query: 3889 HNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P +C  +       +L    E   K + V W+ ICKP+ + GL ++    
Sbjct: 543  TNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLRE 602

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWN---HIAYGDCSWY*RRIKK 4227
             N V   KLIW +L   D++ VKW     +K   +FW+   H   G  SW  RR+ K
Sbjct: 603  ANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKK-ESFWSIGTHSTLG--SWIWRRLLK 656


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score = 92.4 bits (228), Expect(3) = 1e-41
 Identities = 51/176 (28%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F +   P+RYL LPL  +++   +   L  +I +++   +AR LSYA RL +++S+L+S+
Sbjct: 280  FAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSI 339

Query: 3889 HNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P +C ++        L    E     + + WET+C+P+ + GL ++  + 
Sbjct: 340  CNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKE 399

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLK 4233
             N VC  KLIW I+ + D++ V+W+    +K    FW+  +    SW  +++ K +
Sbjct: 400  ANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRN-TFWSFRSASQGSWMWKKLLKYR 454



 Score = 82.0 bits (201), Expect(3) = 1e-41
 Identities = 54/216 (25%), Positives = 101/216 (46%)
 Frame = +2

Query: 3023 QTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEMNIWIFW 3202
            Q+ F++   L+ N+L+   +++  ++ + S RC +KID+ KA++ V+   L  + + +  
Sbjct: 80   QSAFIKDRLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTL-- 137

Query: 3203 KIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDG 3382
                      +P                            V+   F+V+ N +  GYF+ 
Sbjct: 138  ---------DFPQEFVHWIMLC------------------VTTASFSVQVNRELAGYFNS 170

Query: 3383 KRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCK 3562
             R LRQ   ++P LFV+VMD  S+ +     L  + +H       LTHL FADD+M+   
Sbjct: 171  LRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTD 230

Query: 3563 ENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
              + S+  ++E    F+   GL+ ++ K+ ++ AG+
Sbjct: 231  GKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGI 266



 Score = 47.4 bits (111), Expect(3) = 1e-41
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +1

Query: 2914 EVGQFRPICCCNVVYK*ISKILCKRLKSVLPSLV 3015
            E+  +RPI CCNV+YK ISKI+  RLK VLP  +
Sbjct: 43   EIKDYRPISCCNVLYKVISKIIANRLKRVLPQFI 76


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  128 bits (322), Expect(2) = 1e-41
 Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 13/335 (3%)
 Frame = +2

Query: 2705 YSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNAT 2884
            ++ +++K A  S+  NK++ PDG+   FFRD  +I+G ++  A+ EF  +G+LLKQ NAT
Sbjct: 307  FTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNAT 366

Query: 2885 IITWRLPLHWRLGSLDQYVVAM*CINEYLRYCVKG*RVYYLR*LMT------QTTFVQGM 3046
             +   +P      ++ ++     C+N   +   K      L+ L++      Q+ F+ G 
Sbjct: 367  TLVL-IPKTSNACTISEFRPIS-CLNTLYKVISKL-LTSRLQGLLSAVIGHSQSAFLPGR 423

Query: 3047 SLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR----SKVLEEMNI---WIFWK 3205
            SL  NVL+   M+   NR N S R ++K+DL+KA++ V+    +  L  + I   +I W 
Sbjct: 424  SLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINW- 482

Query: 3206 IHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDGK 3385
            IH                                   + ++   FT+  NG   G+F   
Sbjct: 483  IH-----------------------------------QCITTPSFTISVNGATGGFFRST 507

Query: 3386 RELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKE 3565
            + LRQ +P+SP LFV+ M+ FS+++ +        +H       ++HL+FADD+MI    
Sbjct: 508  KGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDG 567

Query: 3566 NVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
               S+  + E L  F+   GL+ N DKS +F AG+
Sbjct: 568  GSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL 602



 Score = 72.4 bits (176), Expect(2) = 1e-41
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F   TFPIRYL LPL   K    +   L  K+  ++ +  ++ LS+A R Q+I+S++F +
Sbjct: 615  FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGL 674

Query: 3889 HNF*GGVY-PPSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P  C K       + L   S + +K S V W   C P+++ GL  +    
Sbjct: 675  INFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGE 734

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLK 4233
            WN   + +LIW++ ++  ++  +W    +     +FW   A     W  + +  L+
Sbjct: 735  WNKTLLLRLIWVLFDRDTSLWAQWQRH-HRLGHASFWQVNALQTDPWTWKMLLNLR 789


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  128 bits (322), Expect(2) = 1e-41
 Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 13/335 (3%)
 Frame = +2

Query: 2705 YSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNAT 2884
            ++ +++K A  S+  NK++ PDG+   FFRD  +I+G ++  A+ EF  +G+LLKQ NAT
Sbjct: 307  FTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNAT 366

Query: 2885 IITWRLPLHWRLGSLDQYVVAM*CINEYLRYCVKG*RVYYLR*LMT------QTTFVQGM 3046
             +   +P      ++ ++     C+N   +   K      L+ L++      Q+ F+ G 
Sbjct: 367  TLVL-IPKTSNACTISEFRPIS-CLNTLYKVISKL-LTSRLQGLLSAVIGHSQSAFLPGR 423

Query: 3047 SLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR----SKVLEEMNI---WIFWK 3205
            SL  NVL+   M+   NR N S R ++K+DL+KA++ V+    +  L  + I   +I W 
Sbjct: 424  SLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINW- 482

Query: 3206 IHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDGK 3385
            IH                                   + ++   FT+  NG   G+F   
Sbjct: 483  IH-----------------------------------QCITTPSFTISVNGATGGFFRST 507

Query: 3386 RELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKE 3565
            + LRQ +P+SP LFV+ M+ FS+++ +        +H       ++HL+FADD+MI    
Sbjct: 508  KGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDG 567

Query: 3566 NVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
               S+  + E L  F+   GL+ N DKS +F AG+
Sbjct: 568  GSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL 602



 Score = 72.4 bits (176), Expect(2) = 1e-41
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F   TFPIRYL LPL   K    +   L  K+  ++ +  ++ LS+A R Q+I+S++F +
Sbjct: 615  FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGL 674

Query: 3889 HNF*GGVY-PPSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P  C K       + L   S + +K S V W   C P+++ GL  +    
Sbjct: 675  INFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGE 734

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLK 4233
            WN   + +LIW++ ++  ++  +W    +     +FW   A     W  + +  L+
Sbjct: 735  WNKTLLLRLIWVLFDRDTSLWAQWQRH-HRLGHASFWQVNALQTDPWTWKMLLNLR 789


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  110 bits (275), Expect(2) = 2e-41
 Identities = 62/217 (28%), Positives = 107/217 (49%)
 Frame = +2

Query: 3020 TQTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSKVLEEMNIWIF 3199
            +Q  F+ G  +  N+++ H +++   R N S RC++KIDL KAY+ V    LE++   + 
Sbjct: 354  SQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVMEGL- 412

Query: 3200 WKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFD 3379
                       +P                          K V    +T+  NG     FD
Sbjct: 413  ----------GFPDLFTKWVM------------------KCVKTVNYTIVVNGQNTQRFD 444

Query: 3380 GKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISC 3559
              + LRQ +P+SP LF + M+Y SR++  + +   +++H  Y +  +THL FADDL++  
Sbjct: 445  AAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFS 504

Query: 3560 KENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            + ++ S+  + +    FS   GL+ANL+KS+++  GV
Sbjct: 505  RGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGV 541



 Score = 89.7 bits (221), Expect(2) = 2e-41
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
 Frame = +1

Query: 3658 CGRGDAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARH 3837
            CG      +  ++    +TI   P +YL +PLS +K   I+ + L  K++ ++ + +A+ 
Sbjct: 538  CGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKK 597

Query: 3838 LSYASRLQVINSLLFSMHNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWET 4014
            LSYA R Q++ ++LF +      ++  P+K  K         L        K +L+ W+ 
Sbjct: 598  LSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDK 657

Query: 4015 ICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFW 4176
            +C P+ + GL +   ++WN   V KL W +  K D + +KW+H  Y+K G   W
Sbjct: 658  VCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIK-GQREW 710



 Score = 63.5 bits (153), Expect = 9e-07
 Identities = 38/119 (31%), Positives = 59/119 (49%)
 Frame = +1

Query: 1780 VTQP*IVLSDFNSVLHMEDKMGGNHVTLTEVVDLQTCLNQSGLAELPNSCCSYTWNDKQD 1959
            V  P I++ D N++L  +D++ G  V   E+ D   C+   GL E               
Sbjct: 69   VNHPWIIVGDLNAMLSPKDRLAGVPVNENEIKDFSNCVKVMGLNE-------------SG 115

Query: 1960 NVRVYFRIDGAFVNGEWLDNVKACRSKFLHEGVSDHSPLQVILIQGANKKKRAFKYWNM 2136
            N R+  RID AF N +W+D       ++ + GVS HSP+ +IL Q   + K  FK++N+
Sbjct: 116  NARISSRIDRAFGNEDWMDEWGHVILEYGNPGVSYHSPMHLILQQSYQQIKVNFKFFNI 174


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  123 bits (309), Expect(2) = 7e-41
 Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 24/353 (6%)
 Frame = +2

Query: 2690 NLFDPYSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLK 2869
            +L  P+S   +K+A  S+  NK++ PDGF   FF     I+G +++EA+ EF  +GKLLK
Sbjct: 339  SLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLK 398

Query: 2870 QLNATIITWRLPLHWRLGSLDQYVVAM*CINEYLRYCVKG*RVYYLR*LMT--------- 3022
            Q NAT +   +P      S+  +     C+N   +   K         L+T         
Sbjct: 399  QWNATNLVL-IPKITNASSMSDFRPIS-CLNTVYKVISK---------LLTDRLKDFLPA 447

Query: 3023 -----QTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR-------- 3163
                 Q+ F+ G   + NVL+   ++   N+ N +   ++K+DLRKA++ VR        
Sbjct: 448  AISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSAL 507

Query: 3164 --SKVLEEMNIWIFWKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTK 3337
                V E+   WI                                        + +S   
Sbjct: 508  RALNVPEKFTCWIL---------------------------------------ECLSTAS 528

Query: 3338 FTVKFNGDGHGYFDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQK 3517
            F+V  NG   G+F   + LRQ +P+SP LFV+ M+ FS ++ +        +H   ++ +
Sbjct: 529  FSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLE 588

Query: 3518 LTHLIFADDLMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGVMQ 3676
            ++HL+FADD+MI       S+  ++E+L+ F+   GL  N +K+ ++ AG+ Q
Sbjct: 589  ISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQ 641



 Score = 74.7 bits (182), Expect(2) = 7e-41
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F + + P+RYL LPL   K    E   L  KI  +  +   R LS+A R+Q++ S++  +
Sbjct: 652  FKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGI 711

Query: 3889 HNF*-GGVYPPSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF       P  C K       R L  S  +KK ++ V W  +C P+ + G+ ++   V
Sbjct: 712  VNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAV 771

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLKL 4236
             N     ++IW++     ++ V W  +  +    +FWN       SW  + + +L++
Sbjct: 772  SNRTLYLRMIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLRV 828


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  119 bits (299), Expect(2) = 9e-41
 Identities = 97/349 (27%), Positives = 157/349 (44%), Gaps = 14/349 (4%)
 Frame = +2

Query: 2666 FRLTESHNNLFD-PYSKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLE 2842
            FR T S N +     S  ++K  + S+  +KS  PDG+ S F++    I+G + +  +  
Sbjct: 86   FRCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQS 145

Query: 2843 FL*NGKLLKQLNATIITWRLPLHWRLGSLDQYVVAM*CINEYLRYCVKG*RVYYLR*LM- 3019
            F   G L K +N+ I+   +P       +  Y     C    L   +       L+ L+ 
Sbjct: 146  FFQKGFLPKGINSIILAL-IPKKLAAKEMRDYRPISCC--NVLYKVISKIIANRLKLLLP 202

Query: 3020 -----TQTTFVQGMSLVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR----SKV 3172
                  Q+ FV+   L+ N+L+   +++  ++ + SARC +KID+ KA++ V+    +  
Sbjct: 203  RFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNT 262

Query: 3173 LEEMNI---WIFWKIHLS**WHAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFT 3343
            L  MN    +I W I+L                                    ++   F+
Sbjct: 263  LVAMNFSPTFIHW-INLC-----------------------------------ITTASFS 286

Query: 3344 VKFNGDGHGYFDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLT 3523
            V+ NGD  GYF  KR LRQ   +SP LFV+ MD  S+++     +  + FH    R  LT
Sbjct: 287  VQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLT 346

Query: 3524 HLIFADDLMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            HL FADDLM+       S+  ++E    F    GL  +L+KS +++AGV
Sbjct: 347  HLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGV 395



 Score = 78.2 bits (191), Expect(2) = 9e-41
 Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F +   P+RYL LPL  ++    +   L  +I K++   + R  S+A R  +I S+L+S+
Sbjct: 409  FDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSI 468

Query: 3889 HNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P +C ++        L   SE     + + W+ +CKP+ + GL ++  + 
Sbjct: 469  CNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKE 528

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYGDCSWY*RRIKKLK 4233
             N V   KL+W I+   +++  KWV E  ++    +    +    SW  R+I K++
Sbjct: 529  ANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIR 584


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  106 bits (264), Expect(3) = 1e-40
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
 Frame = +1

Query: 3655 VCGRGDAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSAR 3834
            +C   DA+TK  +L ++ F     P +YL +P++ +K   I    L  KI+ K+   +AR
Sbjct: 115  LCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTAR 174

Query: 3835 HLSYASRLQVINSLLFSMHNF*GGVYPPSKCFKDNL*EM*RILV--GSSEEKKKVSLVVW 4008
             LSYA RLQ++NS++F++ N+    +P  K     +  + RI +  G  E  +K S V W
Sbjct: 175  LLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRK-SPVAW 233

Query: 4009 ETICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIA 4188
            + IC PR+  GLNI   ++WN   + KL+W +  K D++ VKW+   Y+K        + 
Sbjct: 234  KQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMK 293

Query: 4189 YGDCSWY*RRIKKLKLGMTSWYNNRGYCLTANEKYSVSKGYLKLLRDSPNAEVADLIWSR 4368
              D SW  + I K +  +    N     L      ++ K Y KL       E  +L++  
Sbjct: 294  NTD-SWIMKAILKQREDLEKIDNMEE--LMIRGSINMGKLYRKLQDCGQRKEWKNLLYGN 350

Query: 4369 FLLPKHMFM 4395
               P+  F+
Sbjct: 351  TARPRANFI 359



 Score = 74.7 bits (182), Expect(3) = 1e-40
 Identities = 41/116 (35%), Positives = 65/116 (56%)
 Frame = +2

Query: 3323 VSFTKFTVKFNGDGHGYFDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFHSM 3502
            VS   +    NG        +R LRQ +PISP+LFV+VM+  +R +  M +  D+ +H  
Sbjct: 4    VSTVSYRFNVNGYKTEIMGARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNYHPK 63

Query: 3503 YNRQKLTHLIFADDLMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
             ++ K+T+L FADDL++  + +  SV  +M A + FS   GL  N  K ++  AG+
Sbjct: 64   CDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGI 119



 Score = 37.0 bits (84), Expect(3) = 1e-40
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +3

Query: 4395 VWLAKQDRLLTKDKMLTMGIQCNDINYGLCLDGWPENTLHLFYYCTWIRELWELVTQWTC 4574
            +WLA   RL TKD++   G+  +D +   C +   E+  HLF+ C   + +W  V QW  
Sbjct: 360  LWLACHGRLSTKDRLCKYGM-IDDKSCCFCSE--EESMNHLFFVCDNSKRVWMEVLQWVQ 416

Query: 4575 IK 4580
            I+
Sbjct: 417  IR 418


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  110 bits (276), Expect(2) = 3e-40
 Identities = 93/321 (28%), Positives = 144/321 (44%), Gaps = 12/321 (3%)
 Frame = +2

Query: 2750 NKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNATIITWRLPLHWRLGSL 2929
            NK   PDG+ S FF+   +I G D   A+  F   G L K LNATI+   +P       +
Sbjct: 41   NKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILAL-IPKKDEATLM 99

Query: 2930 DQYVVAM*C------INEYLRYCVKG*RVYYLR*LMTQTTFVQGMSLVHNVLICHNMMRH 3091
              Y     C      I++ +   +K     ++  L  Q+ FV+   L+ NVL+   +++ 
Sbjct: 100  RDYRPISCCNVIYKVISKIIANRLKVMLPTFI--LQNQSAFVRERLLIENVLLATELVKD 157

Query: 3092 *NRTNTSARCLMKIDLRKAYNMVRSK----VLEEMNIWIFWKIHLS**WHAYPXXXXXXX 3259
             ++ + S RC MKID+ KA++ V+ +     LE +N                        
Sbjct: 158  YHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNF----------------------- 194

Query: 3260 XXXXXXD**KITPRGF*--FKKYVSFTKFTVKFNGDGHGYFDGKRELRQDNPISPLLFVM 3433
                        P  F    K  +S   F+V+ NG+  G+F  KR LRQ   +SP LFV+
Sbjct: 195  ------------PENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVI 242

Query: 3434 VMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKENVCSV*RVMEALKHFS 3613
             M+  S ++       +  +H    +  LTHL FADDLM+       SV  V+   K F+
Sbjct: 243  CMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFA 302

Query: 3614 VVYGLEANLDKSNMFVAGVMQ 3676
               GL  +L+KS +++AGV +
Sbjct: 303  GKSGLHISLEKSTLYLAGVSE 323



 Score = 85.1 bits (209), Expect(2) = 3e-40
 Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
 Frame = +1

Query: 3652 YVCGRGDAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSA 3831
            Y+ G  + + ++ +L    F     P+RYL LPL  ++    +   L  K+  K+++ +A
Sbjct: 317  YLAGVSE-LNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTA 375

Query: 3832 RHLSYASRLQVINSLLFSMHNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVW 4008
            R LSYA RL +INS++ S+ NF    Y  P+ C K+        L    E   K + + W
Sbjct: 376  RSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITW 435

Query: 4009 ETICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWN 4179
             ++CK + + GL IK     N V   KLIW ++ +  ++ V WV    ++ G +FW+
Sbjct: 436  TSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKG-SFWS 491


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  110 bits (274), Expect(2) = 7e-40
 Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 7/328 (2%)
 Frame = +2

Query: 2708 SKNDVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNATI 2887
            S  ++K  + S+  +KS  PDGF S FF+++  I+G +   A+  F   G L K +N+TI
Sbjct: 7    SAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTI 66

Query: 2888 ITWRLPLHWRLGSLDQYVVAM*C------INEYLRYCVKG*RVYYLR*LMTQTTFVQGMS 3049
            +   +P       +  Y     C      I++ L   +K     ++     Q++FV+   
Sbjct: 67   LAL-IPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIA--GNQSSFVKDRL 123

Query: 3050 LVHNVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVR-SKVLEEMNIWIFWKIHLS**W 3226
            L+ NVL+  ++++  ++ + S RC +KID+ KA + V+ S ++  +    F ++ +   W
Sbjct: 124  LIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIH--W 181

Query: 3227 HAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDGKRELRQDN 3406
                                         +  ++   F+V+ NG+  G+F   R LRQ  
Sbjct: 182  ----------------------------IRLCITTPSFSVQVNGELAGFFQSSRGLRQGC 213

Query: 3407 PISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKENVCSV*R 3586
             +SP LFV+ MD  S+++  +  +    +H    R  LTHL FADDLMI       S+  
Sbjct: 214  ALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEG 273

Query: 3587 VMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            ++E    FS   GL+ +++KS +F AG+
Sbjct: 274  IIEVFDLFSKWSGLKISMEKSTIFSAGL 301



 Score = 84.7 bits (208), Expect(2) = 7e-40
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
 Frame = +1

Query: 3709 FTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSM 3888
            F +   PIRYL LPL  ++   ++   L  +I K++ + S+R LS+A R  +I+S+++S 
Sbjct: 315  FEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSS 374

Query: 3889 HNF*GGVYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEV 4065
             NF    +  P  C ++        L   +    K + + W  +CKP+++ GL ++  + 
Sbjct: 375  CNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKE 434

Query: 4066 WNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFW 4176
             N VC  KL+W I+   D++ VKWV    +K  + FW
Sbjct: 435  ANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREI-FW 470


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  110 bits (276), Expect(2) = 2e-38
 Identities = 90/328 (27%), Positives = 151/328 (46%), Gaps = 10/328 (3%)
 Frame = +2

Query: 2717 DVKDAMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNATIITW 2896
            +++  + ++  NKS  PDG+ S FF+   ++ G D   A+  F   G L K LNATI+  
Sbjct: 754  EIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILAL 813

Query: 2897 RLPLHWRLGSLDQYVVAM*C------INEYLRYCVKG*RVYYLR*LMTQTTFVQGMSLVH 3058
             +P       +  Y     C      I++ L   +K     ++  L  Q+ FV+   L+ 
Sbjct: 814  -IPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFI--LQNQSAFVKERLLME 870

Query: 3059 NVLICHNMMRH*NRTNTSARCLMKIDLRKAYNMVRSK----VLEEMNIWIFWKIHLS**W 3226
            NVL+   +++  ++ + + RC MKID+ KA++ V+ +     LE +N             
Sbjct: 871  NVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALN------------- 917

Query: 3227 HAYPXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDGKRELRQDN 3406
              +P                         K  +S   F+V+ NG+  G+F   R LRQ  
Sbjct: 918  --FPETFRHW------------------IKLCISTATFSVQVNGELAGFFGSSRGLRQGC 957

Query: 3407 PISPLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKENVCSV*R 3586
             +SP LFV+ M+  S ++       +  +H    +  LTHL FADDLM+    +  S+  
Sbjct: 958  ALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEG 1017

Query: 3587 VMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            V+   K F+   GL+ +L+KS +++AGV
Sbjct: 1018 VINVFKEFAGRSGLQISLEKSTIYLAGV 1045



 Score = 79.0 bits (193), Expect(2) = 2e-38
 Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
 Frame = +1

Query: 3727 PIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSMHNF*GG 3906
            P+RYL LPL  ++    +   L   +  K+++ +AR LSYA RL ++NS++ S+ NF   
Sbjct: 1065 PVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMS 1124

Query: 3907 VYP-PSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEVWNMVCV 4083
             Y  P+ C ++        L        K + + W +IC+P+ + GL IK     N V  
Sbjct: 1125 AYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSC 1184

Query: 4084 WKLIWMILEKVDNICVKWVHEIYMKNGMAFWN 4179
             KLIW +L    ++ V W+    ++ G  FW+
Sbjct: 1185 LKLIWRLLSTQPSLWVTWIWTFIIRKG-TFWS 1215


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  101 bits (252), Expect(2) = 4e-37
 Identities = 65/229 (28%), Positives = 116/229 (50%), Gaps = 5/229 (2%)
 Frame = +1

Query: 3658 CGRGDAMTKDMVL*LTDFTIRTFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARH 3837
            CG  +  +  ++  +T F   T P+RYL +PLS +K        L  KI+ K+   S++ 
Sbjct: 219  CGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKL 278

Query: 3838 LSYASRLQVINSLLFSMHNF*GGVYPPSKCFKDNL*EM*RILVGS-SEEKKKVSLVVWET 4014
            LS A R+Q++ S++ ++  +   V+P  K     +  + R  + S S E K+ SLV W+ 
Sbjct: 279  LSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQ 338

Query: 4015 ICKPRTQRGLNIKGCEVWNMVCVWKLIWMILEKVDNICVKWVHEIYMKNGMAFWNHIAYG 4194
            +CKP    GLN+   E+WN+  + K +W I  K DN+ VKW+H  ++K G    +     
Sbjct: 339  VCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAYFLK-GDNVMSATIKS 397

Query: 4195 DCSWY*RRIKKLKLGMTS----WYNNRGYCLTANEKYSVSKGYLKLLRD 4329
            + +W  + + K +  + +    W       +    K+S+ + Y++L+ D
Sbjct: 398  NSTWILKSVMKQRPQVNNLQLVWIE-----MLRKRKFSMKQVYMELVED 441



 Score = 84.0 bits (206), Expect(2) = 4e-37
 Identities = 42/118 (35%), Positives = 67/118 (56%)
 Frame = +2

Query: 3317 KYVSFTKFTVKFNGDGHGYFDGKRELRQDNPISPLLFVMVMDYFSRIMTNMGQLPDYRFH 3496
            K ++   +    NG+     + K  + Q +PISPLLFV++M+YF+RIM  M + P +  H
Sbjct: 105  KVITTVNYRFNINGELSNVLETKIGIWQGDPISPLLFVLMMEYFNRIMVKMQRNPSFNHH 164

Query: 3497 SMYNRQKLTHLIFADDLMISCKENVCSV*RVMEALKHFSVVYGLEANLDKSNMFVAGV 3670
            S   R  +THL FADD+ + C+ +  S+  +++A   FS   GL+ N  K  +F  G+
Sbjct: 165  SQCERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCKVFCGGL 222


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1| AT4g02490
            [Arabidopsis thaliana]
          Length = 657

 Score = 98.6 bits (244), Expect(2) = 1e-35
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 11/324 (3%)
 Frame = +2

Query: 2729 AMMSININKSTEPDGFESSFFRDACAIVGDDISEAMLEFL*NGKLLKQLNATIITWRLPL 2908
            A+ S+  NK+  PDGF   FF +A  IV +    A+ EF   G LLK  NAT IT  +P 
Sbjct: 2    ALFSMPRNKAPGPDGFPVEFFLEAWPIVKESFIAAIKEFFLTGHLLKGFNATAITL-IPK 60

Query: 2909 HWRLGSLDQYVVAM*CINEY---LRYCVKG*RVYYLR*LMT-QTTFVQGMSLVHNVLICH 3076
                  L+ +     C   Y    R   K   ++  + + + Q  F++G  L  NVL+  
Sbjct: 61   VPGADQLNLFRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLAS 120

Query: 3077 NMMRH*NRTNTSARCLMKIDLRKAYNMVRSK----VLEEMN---IWIFWKIHLS**WHAY 3235
             ++ +      ++R  +++DL KAY+ V  +    +L+ +N   I+I W       W   
Sbjct: 121  ELVDNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWI------WVC- 173

Query: 3236 PXXXXXXXXXXXXXD**KITPRGF*FKKYVSFTKFTVKFNGDGHGYFDGKRELRQDNPIS 3415
                                         +S   +++ +NG+  G+F GK+ +RQ +P+S
Sbjct: 174  -----------------------------ISTPSYSIAYNGELIGFFVGKKGIRQGDPMS 204

Query: 3416 PLLFVMVMDYFSRIMTNMGQLPDYRFHSMYNRQKLTHLIFADDLMISCKENVCSV*RVME 3595
              LFV+VMD  +R +        +  H       +THL FADD+++ C  ++ S+  +++
Sbjct: 205  SHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILD 264

Query: 3596 ALKHFSVVYGLEANLDKSNMFVAG 3667
             L  F    GL  NL K+ + + G
Sbjct: 265  ILDVFKKGSGLGINLQKTALLLDG 288



 Score = 82.4 bits (202), Expect(2) = 1e-35
 Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
 Frame = +1

Query: 3721 TFPIRYLRLPLSPEKWIKIECHQLSVKIIKKVTARSARHLSYASRLQVINSLLFSMHNF* 3900
            + P+RYL +PL  +K  K +   L  +I  + T+ +ARHLS+A RLQ++ S+++S  NF 
Sbjct: 307  SLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFW 366

Query: 3901 GGVY-PPSKCFKDNL*EM*RILVGSSEEKKKVSLVVWETICKPRTQRGLNIKGCEVWNMV 4077
              ++  P++C           L   +    + + + W+ +C  +   GL +K    WN V
Sbjct: 367  ASIFILPNQCLHKLEQMCNAFLWSGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKV 426

Query: 4078 CVWKLIWMILEKVDNICVKWVHEIYMK 4158
               KLIW++     ++ V WV  ++ K
Sbjct: 427  LALKLIWLLFTASGSLWVSWVRWVWRK 453