BLASTX nr result
ID: Atropa21_contig00013358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00013358
(476 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9... 268 6e-70
ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup9... 264 8e-69
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b... 249 3e-64
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9... 155 7e-36
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar... 149 5e-34
ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup9... 144 1e-32
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9... 144 2e-32
gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis] 143 3e-32
gb|EMJ21482.1| hypothetical protein PRUPE_ppa000667mg [Prunus pe... 140 2e-31
ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Me... 140 2e-31
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr... 139 3e-31
gb|ESW14507.1| hypothetical protein PHAVU_008G287100g [Phaseolus... 138 7e-31
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9... 138 9e-31
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|... 135 6e-30
ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arab... 134 1e-29
ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Caps... 134 1e-29
ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup9... 134 2e-29
gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 9... 132 5e-29
ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis t... 132 5e-29
gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsi... 132 5e-29
>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
tuberosum]
Length = 1033
Score = 268 bits (685), Expect = 6e-70
Identities = 133/154 (86%), Positives = 142/154 (92%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRKVSALDQILGENEAALPTLRCPDYFTEPCLSELAIREVM 193
MEV+LGT +QLIVSQSQCKRRK+SALDQILGENEA LPTLR PDYFT+PCLSELA+RE+M
Sbjct: 1 MEVELGTPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTDPCLSELAVRELM 60
Query: 194 CPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVG 373
GYCSK ENFTVGRFGYGFVKFSGETDV GLDLDRIVKF RHEVI+YEDENDKPPVG+G
Sbjct: 61 ISGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMG 120
Query: 374 LNKPAEVTLLLEIRSVKRNGVDSSREMVEKLRLR 475
LNKPAEVTLLLEIRS K VDSSRE+VEKLRLR
Sbjct: 121 LNKPAEVTLLLEIRSSKHYDVDSSRELVEKLRLR 154
>ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
lycopersicum]
Length = 1012
Score = 264 bits (675), Expect = 8e-69
Identities = 131/154 (85%), Positives = 140/154 (90%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRKVSALDQILGENEAALPTLRCPDYFTEPCLSELAIREVM 193
MEVDLG +QLIVSQSQCKRRK+SALDQILGENEA LPTLR PDYFTEPCLSELA+RE+M
Sbjct: 1 MEVDLGNPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTEPCLSELAVRELM 60
Query: 194 CPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVG 373
GYCSK ENFTVGRFGYGFV+FSGETDV GLDLDRIVKF RHEVI+YEDENDKPPVG+G
Sbjct: 61 SSGYCSKVENFTVGRFGYGFVEFSGETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMG 120
Query: 374 LNKPAEVTLLLEIRSVKRNGVDSSREMVEKLRLR 475
LNKPAEVTLLLE+RS K VDSSR +VEKLRLR
Sbjct: 121 LNKPAEVTLLLEVRSSKHYDVDSSRGLVEKLRLR 154
>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
Length = 1037
Score = 249 bits (636), Expect = 3e-64
Identities = 127/158 (80%), Positives = 136/158 (86%), Gaps = 4/158 (2%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRKVS----ALDQILGENEAALPTLRCPDYFTEPCLSELAI 181
MEVD+G DQLIVSQSQCKRRKVS ALDQI GENEAALPTL+ DYFTEPCLSELAI
Sbjct: 1 MEVDIGIHDQLIVSQSQCKRRKVSLDGVALDQIFGENEAALPTLQSTDYFTEPCLSELAI 60
Query: 182 REVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPP 361
RE+M PGYCS +FTVGRFGYGFVKF GETDV GLDLDRIV F RHEV++YEDENDKPP
Sbjct: 61 RELMSPGYCSSVRDFTVGRFGYGFVKFFGETDVRGLDLDRIVTFSRHEVVVYEDENDKPP 120
Query: 362 VGVGLNKPAEVTLLLEIRSVKRNGVDSSREMVEKLRLR 475
VG GLNKPAEVTLLL++RS K + VDSSREMVEKLR R
Sbjct: 121 VGEGLNKPAEVTLLLKMRSSKNSDVDSSREMVEKLRCR 158
>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
vinifera]
Length = 1041
Score = 155 bits (391), Expect = 7e-36
Identities = 89/160 (55%), Positives = 111/160 (69%), Gaps = 7/160 (4%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRK-----VSALDQILGENEAALPTLRCPDYFTEPCLSELA 178
M D GT I Q KRRK VS+L ++ GE EA+LPTLR Y+ EPCL ELA
Sbjct: 3 MGCDAGTSGSQIALH-QYKRRKISQKNVSSLCEVHGEVEASLPTLRSSGYYMEPCLKELA 61
Query: 179 IREVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKP 358
RE+M G+CS+ ++FTVGRFGYG VKF G+TDV LDLD+I++F RHEV++Y DE KP
Sbjct: 62 KRELMDSGFCSRVQDFTVGRFGYGRVKFLGDTDVRWLDLDQIIRFGRHEVVVYGDEGAKP 121
Query: 359 PVGVGLNKPAEVTLLLEIRSVKRNGVDSSR--EMVEKLRL 472
VG GLNK AEVTL+L+IRS + + R ++VEKLRL
Sbjct: 122 EVGQGLNKAAEVTLVLQIRS---SSFEEGRLNDIVEKLRL 158
>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
[Populus trichocarpa]
Length = 1067
Score = 149 bits (375), Expect = 5e-34
Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 4/143 (2%)
Frame = +2
Query: 53 SQSQCKRRKVSALDQILGEN----EAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAE 220
S+ Q K+R+ S + E+ EA LPTLR DY+ EPCL +LA EV+ PGYCS+
Sbjct: 40 SEGQYKKRRTSLKSEPRCEDFRMVEALLPTLRSVDYYMEPCLMDLAAGEVVDPGYCSRVL 99
Query: 221 NFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTL 400
+FTVGRFGYG VKF G+TDV L+LD+IVKF RHEVI+YEDEN KP VG GLNKPAEV+L
Sbjct: 100 DFTVGRFGYGRVKFLGKTDVRRLNLDQIVKFNRHEVIVYEDENAKPMVGQGLNKPAEVSL 159
Query: 401 LLEIRSVKRNGVDSSREMVEKLR 469
L+++ + N ++VEKLR
Sbjct: 160 TLKLKLLDFN-KGRINDVVEKLR 181
>ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Cicer arietinum] gi|502099969|ref|XP_004491603.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Cicer arietinum]
Length = 1022
Score = 144 bits (363), Expect = 1e-32
Identities = 76/141 (53%), Positives = 95/141 (67%), Gaps = 4/141 (2%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRK----VSALDQILGENEAALPTLRCPDYFTEPCLSELAI 181
ME D+G I + S KRR ++ I+ E EA+LPTL DY+TEP L ELA
Sbjct: 1 MECDVGGIFDSYIVHSYKKRRVSDCCITPSSVIMTEIEASLPTLHSLDYYTEPSLKELAA 60
Query: 182 REVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPP 361
EV+ PGYCS +FTVGR GYG+V++ +TDV GL LD IVKF RHE+++YEDENDKP
Sbjct: 61 LEVLYPGYCSGVPDFTVGRLGYGYVRYLSKTDVRGLCLDDIVKFHRHEIVVYEDENDKPA 120
Query: 362 VGVGLNKPAEVTLLLEIRSVK 424
VG GLNK AEV L+L+ +K
Sbjct: 121 VGQGLNKSAEVVLVLDSGKLK 141
>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Glycine max] gi|571506071|ref|XP_006595657.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Glycine max]
Length = 1022
Score = 144 bits (362), Expect = 2e-32
Identities = 78/159 (49%), Positives = 106/159 (66%), Gaps = 7/159 (4%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRKV------SALDQILGENEAALPTLRCPDYFTEPCLSEL 175
ME D+G + + + CKRR+V ++D I+ E EA+LP L Y+T+P L EL
Sbjct: 1 MECDVGGVSDSCILHT-CKRRRVYKGCFHPSID-IMTETEASLPILNSSGYYTKPSLKEL 58
Query: 176 AIREVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDK 355
RE++ PGYCS+ +FTVGRFGYG+V++ ETDV GL +D IVKF RHE+++Y DENDK
Sbjct: 59 VARELVEPGYCSRVPDFTVGRFGYGYVRYLNETDVRGLRIDEIVKFHRHEIVVYSDENDK 118
Query: 356 PPVGVGLNKPAEVTLLLEIRSVK-RNGVDSSREMVEKLR 469
P VG GLNK AEV L+L+ +K + G + MV KL+
Sbjct: 119 PAVGQGLNKAAEVVLVLDSEILKSKEGKED--VMVSKLK 155
>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
Length = 948
Score = 143 bits (360), Expect = 3e-32
Identities = 75/146 (51%), Positives = 102/146 (69%), Gaps = 6/146 (4%)
Frame = +2
Query: 50 VSQSQCKRRKV-----SALDQILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSK 214
+S + K+R++ S+ +IL E EA+LPTL P+Y+ EPC EL RE+M PGYCS+
Sbjct: 36 ISNPEWKKRRIILNENSSSSEILREIEASLPTLHKPEYYMEPCFDELVQRELMDPGYCSR 95
Query: 215 AENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEV 394
+ T+GR+GYG VK+ GETDV LD+D IV F RHE+++YEDE+ KP VG GLNK AEV
Sbjct: 96 VPDLTIGRYGYGSVKYVGETDVRLLDVDAIVTFGRHEIVVYEDESAKPLVGQGLNKTAEV 155
Query: 395 TLLLEIRSVKRNGVDSSREMV-EKLR 469
TL+L + S N + +E++ EKLR
Sbjct: 156 TLVLRLTSA--NVKEGRKEIIEEKLR 179
>gb|EMJ21482.1| hypothetical protein PRUPE_ppa000667mg [Prunus persica]
Length = 1042
Score = 140 bits (353), Expect = 2e-31
Identities = 82/163 (50%), Positives = 105/163 (64%), Gaps = 14/163 (8%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRKVSALDQI--------LGENEAALPTLRCPDYFTEPCLS 169
M +D GT + LIV Q K+R++S+ I L + LPTL DY+T+P L
Sbjct: 1 MGIDSGTCNALIVCQH--KKRRISSNTGISLCETFSPLEGSLPYLPTLEEADYYTQPSLK 58
Query: 170 ELAIREVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDEN 349
ELA RE PG+ S+ +FTVGRFGYG +K+ G+TD+ L+LD+IVKFRRHEVI+YEDE
Sbjct: 59 ELAAREYTDPGFSSRVLDFTVGRFGYGSIKYLGKTDIRRLELDKIVKFRRHEVIVYEDET 118
Query: 350 DKPPVGVGLNKPAEVTLLLEIR------SVKRNGVDSSREMVE 460
KP VG GLNKPAEVTL+L+ R K N V R++VE
Sbjct: 119 AKPLVGQGLNKPAEVTLVLQTRPSNMDKRQKDNSVKKLRQIVE 161
>ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Medicago truncatula]
gi|355519337|gb|AET00961.1| Nuclear pore complex protein
Nup98-Nup96 [Medicago truncatula]
Length = 1022
Score = 140 bits (353), Expect = 2e-31
Identities = 79/160 (49%), Positives = 105/160 (65%), Gaps = 8/160 (5%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRK----VSALDQILGENEAALPTLRCPDYFTEPCLSELAI 181
ME D+G + S KRR V+ ++ + + EA+LP L P Y+TEP L +LA
Sbjct: 1 MESDVGGVCDSSTVLSYKKRRVSECYVTRSNKTMTKIEASLPILHSPGYYTEPSLKDLAA 60
Query: 182 REVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPP 361
REV+ PGYCS +FTVGRFGYG++++ ETDV GL LD IVKF ++EVI+YEDEN+KP
Sbjct: 61 REVLYPGYCSSVPDFTVGRFGYGYIRYVNETDVRGLCLDDIVKFHKNEVIVYEDENNKPV 120
Query: 362 VGVGLNKPAEVTLLLEIRSVK----RNGVDSSREMVEKLR 469
VG GLNK AEV ++L R +K RN V +V+KL+
Sbjct: 121 VGQGLNKAAEVVMVLNSRKLKSKECRNDV-----LVKKLK 155
>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
gi|557529570|gb|ESR40820.1| hypothetical protein
CICLE_v10024784mg [Citrus clementina]
Length = 1041
Score = 139 bits (351), Expect = 3e-31
Identities = 74/129 (57%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Frame = +2
Query: 95 QILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTVGRFGYGFVKFSGET 274
+I EN +LP L PDY+TEP L++LA REV+ PGY S+ +FTVGR GYG+VKF G T
Sbjct: 32 EISSENGDSLPVLCSPDYYTEPLLNDLAKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNT 91
Query: 275 DVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEIR--SVKRNGVDSSR 448
DV LDLD+IVKF RHE+++YEDE+ KP VG GLNK AEVTL L+ R S+K DS
Sbjct: 92 DVRWLDLDQIVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSD- 150
Query: 449 EMVEKLRLR 475
+ V+K++ R
Sbjct: 151 DFVKKMKER 159
>gb|ESW14507.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
gi|561015647|gb|ESW14508.1| hypothetical protein
PHAVU_008G287100g [Phaseolus vulgaris]
Length = 1022
Score = 138 bits (348), Expect = 7e-31
Identities = 69/137 (50%), Positives = 92/137 (67%), Gaps = 5/137 (3%)
Frame = +2
Query: 14 MEVDLGTIDQLIVSQSQCKRRKV-----SALDQILGENEAALPTLRCPDYFTEPCLSELA 178
ME D+G + + CKRR+V + ++ E EA LP L Y+T+P L EL
Sbjct: 1 MECDVGGVTDSFGLHT-CKRRRVYKGCIAPSVDVMTETEAFLPILNSSGYYTKPSLKELV 59
Query: 179 IREVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKP 358
RE++ PGYC + +FTVGRFGYG+V++ ETDV GL +D IVKFRRHE+++Y DENDKP
Sbjct: 60 ARELVEPGYCGRVSDFTVGRFGYGYVRYLNETDVRGLRIDEIVKFRRHEIVVYSDENDKP 119
Query: 359 PVGVGLNKPAEVTLLLE 409
VG GLNK AEV L+++
Sbjct: 120 AVGQGLNKAAEVVLVVD 136
>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
sinensis]
Length = 1041
Score = 138 bits (347), Expect = 9e-31
Identities = 73/129 (56%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
Frame = +2
Query: 95 QILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTVGRFGYGFVKFSGET 274
+I EN +LP L PDY+TEP L++L REV+ PGY S+ +FTVGR GYG+VKF G T
Sbjct: 32 EISSENGDSLPVLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNT 91
Query: 275 DVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEIR--SVKRNGVDSSR 448
DV LDLD+IVKF RHE+++YEDE+ KP VG GLNK AEVTL L+ R S+K DS
Sbjct: 92 DVRWLDLDQIVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSD- 150
Query: 449 EMVEKLRLR 475
+ V+K++ R
Sbjct: 151 DFVKKMKER 159
>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
gi|223533319|gb|EEF35071.1| nucleoporin, putative
[Ricinus communis]
Length = 1067
Score = 135 bits (340), Expect = 6e-30
Identities = 68/125 (54%), Positives = 91/125 (72%), Gaps = 5/125 (4%)
Frame = +2
Query: 56 QSQCKRRKVSALD-----QILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAE 220
Q+Q K+R++S + +I E E +LPTL DY+ EP L++L E++ PGYCS+
Sbjct: 41 QTQYKKRRLSPNNDDVSCEISREIECSLPTLCSTDYYMEPSLTDLVAHELIDPGYCSRVP 100
Query: 221 NFTVGRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTL 400
+F VGR G+G VKF G TD+ LDLD+IVKFRRHE+++YED++DKP VG GLNK AEVTL
Sbjct: 101 DFIVGRLGFGCVKFLGTTDLRWLDLDKIVKFRRHEIVVYEDDSDKPQVGQGLNKTAEVTL 160
Query: 401 LLEIR 415
L+IR
Sbjct: 161 NLQIR 165
>ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arabidopsis lyrata subsp.
lyrata] gi|297335120|gb|EFH65538.1| hypothetical protein
ARALYDRAFT_895920 [Arabidopsis lyrata subsp. lyrata]
Length = 1045
Score = 134 bits (338), Expect = 1e-29
Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 5/120 (4%)
Frame = +2
Query: 68 KRRKVS-----ALDQILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTV 232
K+R++S AL + E +LP L PDYF +PC+++L RE+ P YCS+ +FT+
Sbjct: 23 KKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCMNDLVEREIKNPDYCSRVPDFTI 82
Query: 233 GRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEI 412
GR GYG++KF G TDV LDLD+IVKFRRHEVI+Y+DE+ KP VG GLNK AEVTL++ I
Sbjct: 83 GRIGYGYIKFLGNTDVRRLDLDQIVKFRRHEVIVYDDESSKPVVGEGLNKAAEVTLIVNI 142
>ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Capsella rubella]
gi|482569383|gb|EOA33571.1| hypothetical protein
CARUB_v10019705mg [Capsella rubella]
Length = 1046
Score = 134 bits (337), Expect = 1e-29
Identities = 64/111 (57%), Positives = 83/111 (74%)
Frame = +2
Query: 80 VSALDQILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTVGRFGYGFVK 259
V+AL + E +LP L PDYF +PC++EL RE+ P YCS+ +FT+GR GYG++K
Sbjct: 32 VTALSEHSKEIIDSLPMLNSPDYFLKPCMNELIEREIENPDYCSRVPDFTIGRIGYGYIK 91
Query: 260 FSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEI 412
F G TDV LDLD+IVKF+RHEVI+Y+DE+ KP VG GLNK AEVTL++ I
Sbjct: 92 FLGNTDVRRLDLDQIVKFQRHEVIVYDDESSKPVVGEGLNKVAEVTLIVNI 142
>ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Fragaria
vesca subsp. vesca]
Length = 1089
Score = 134 bits (336), Expect = 2e-29
Identities = 65/98 (66%), Positives = 77/98 (78%)
Frame = +2
Query: 122 LPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTVGRFGYGFVKFSGETDVTGLDLDR 301
LPTL DY+ +P ELA RE + PGYCS+ +FTVGRFGYG VK+ GETDV L+LD+
Sbjct: 95 LPTLEAVDYYMQPSFEELAARERVDPGYCSRVLDFTVGRFGYGAVKYPGETDVRCLELDK 154
Query: 302 IVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEIR 415
IVKF RHEVI+YEDE+ KP VG GLNKPAEVTL+L+ R
Sbjct: 155 IVKFNRHEVIVYEDESAKPFVGRGLNKPAEVTLMLQTR 192
>gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 98 homolog from Arabidopsis
thaliana cosmid gb|U53501. EST gb|W43800 comes from this
gene [Arabidopsis thaliana] gi|1297187|gb|AAA98914.1|
Theoretical protein with similarity to protein encoded
by GenBank Accession Number U41815, nucleoporin 98
[Arabidopsis thaliana]
Length = 850
Score = 132 bits (332), Expect = 5e-29
Identities = 65/120 (54%), Positives = 85/120 (70%), Gaps = 5/120 (4%)
Frame = +2
Query: 68 KRRKVS-----ALDQILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTV 232
K+R++S AL + E +LP L PDYF +PC++EL RE+ P YCS+ +FT+
Sbjct: 16 KKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDFTI 75
Query: 233 GRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEI 412
GR GYG+++F G TDV LDLD IVKF RHEVI+Y+DE+ KP VG GLNK AEVTL++ I
Sbjct: 76 GRIGYGYIRFLGNTDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLVVNI 135
>ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis thaliana]
gi|22652299|gb|AAN03676.1|AF411839_1 putative
nucleoporin PRECOZ [Arabidopsis thaliana]
gi|61353788|gb|AAX44044.1| putative nucleoporin 96
[Arabidopsis thaliana] gi|332198315|gb|AEE36436.1|
suppressor of auxin resistance 3 [Arabidopsis thaliana]
Length = 1046
Score = 132 bits (332), Expect = 5e-29
Identities = 65/120 (54%), Positives = 85/120 (70%), Gaps = 5/120 (4%)
Frame = +2
Query: 68 KRRKVS-----ALDQILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTV 232
K+R++S AL + E +LP L PDYF +PC++EL RE+ P YCS+ +FT+
Sbjct: 23 KKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDFTI 82
Query: 233 GRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEI 412
GR GYG+++F G TDV LDLD IVKF RHEVI+Y+DE+ KP VG GLNK AEVTL++ I
Sbjct: 83 GRIGYGYIRFLGNTDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLVVNI 142
>gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsis thaliana]
Length = 1046
Score = 132 bits (332), Expect = 5e-29
Identities = 65/120 (54%), Positives = 85/120 (70%), Gaps = 5/120 (4%)
Frame = +2
Query: 68 KRRKVS-----ALDQILGENEAALPTLRCPDYFTEPCLSELAIREVMCPGYCSKAENFTV 232
K+R++S AL + E +LP L PDYF +PC++EL RE+ P YCS+ +FT+
Sbjct: 23 KKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDFTI 82
Query: 233 GRFGYGFVKFSGETDVTGLDLDRIVKFRRHEVILYEDENDKPPVGVGLNKPAEVTLLLEI 412
GR GYG+++F G TDV LDLD IVKF RHEVI+Y+DE+ KP VG GLNK AEVTL++ I
Sbjct: 83 GRIGYGYIRFLGNTDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLVVNI 142