BLASTX nr result

ID: Atropa21_contig00013297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013297
         (1845 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362050.1| PREDICTED: serine/arginine repetitive matrix...   339   3e-90
ref|XP_004246955.1| PREDICTED: uncharacterized protein LOC101263...   326   2e-86
ref|XP_002280607.2| PREDICTED: uncharacterized protein LOC100262...    78   1e-11
emb|CBI16084.3| unnamed protein product [Vitis vinifera]               78   1e-11
ref|XP_002299851.2| hypothetical protein POPTR_0001s25140g [Popu...    61   2e-06

>ref|XP_006362050.1| PREDICTED: serine/arginine repetitive matrix protein 1-like isoform
            X1 [Solanum tuberosum]
          Length = 882

 Score =  339 bits (869), Expect = 3e-90
 Identities = 173/209 (82%), Positives = 185/209 (88%)
 Frame = +3

Query: 3    LSRSPSVPESPGRSRSDSESAPTKRERSPSEDRGPKSTLNRRERKTIDTGSPSPRKLREH 182
            LSRSPSVPESP RSRSDSES PTKR RSPSEDRGP+STLNRRE KT D  S SP KLRE 
Sbjct: 523  LSRSPSVPESPRRSRSDSESPPTKRGRSPSEDRGPRSTLNRREIKTSDFDSLSPSKLREQ 582

Query: 183  RVSSDISEKIADEKEMNRSREVFEHKHRSSRKIPTTPDPYKDLGKGWDEKEFSEIHSQSD 362
            +VSSDISEKI D+KEMN SRE FEHK RSSRKIPTTPDPYKDLGKG+ EKEFS+IHS+SD
Sbjct: 583  KVSSDISEKITDQKEMNHSREAFEHKPRSSRKIPTTPDPYKDLGKGFVEKEFSDIHSRSD 642

Query: 363  LLESRKRTEVIKSEKFPGRMEHTKELVQQKSPSTHRHSHSVKRVRESYDGESIKANKEIL 542
             LESRKR E IKSEKF G MEHTKEL +QKSPSTHRHSHSVKR++ESYDGES+KA+KE L
Sbjct: 643  RLESRKRNEAIKSEKFSGTMEHTKELDKQKSPSTHRHSHSVKRLKESYDGESVKADKENL 702

Query: 543  SHTNATKGKELHVGSEAPLTSSRKVEQND 629
            SHTN TKGKELHV SEAPLTSS+KVEQND
Sbjct: 703  SHTNDTKGKELHVESEAPLTSSKKVEQND 731



 Score = 81.6 bits (200), Expect = 1e-12
 Identities = 44/56 (78%), Positives = 49/56 (87%), Gaps = 3/56 (5%)
 Frame = +3

Query: 918  DTEKNHDSRASDDEHLRKEDRH--EIEES-SLQKRLEIELREKALESLRAKKGIRH 1076
            DT++N D+ ASDDEHLRKE +H  EIEES SLQKRLEIELREKALESLRAKKG+ H
Sbjct: 827  DTDRNPDNHASDDEHLRKEGQHGREIEESESLQKRLEIELREKALESLRAKKGVSH 882


>ref|XP_004246955.1| PREDICTED: uncharacterized protein LOC101263053 [Solanum
            lycopersicum]
          Length = 921

 Score =  326 bits (836), Expect = 2e-86
 Identities = 167/209 (79%), Positives = 183/209 (87%)
 Frame = +3

Query: 3    LSRSPSVPESPGRSRSDSESAPTKRERSPSEDRGPKSTLNRRERKTIDTGSPSPRKLREH 182
            LSRSPSVPESP RSRSDSES PTKR RSPSEDRGP+ST N RE KTID  S SP KLRE 
Sbjct: 562  LSRSPSVPESPHRSRSDSESPPTKRGRSPSEDRGPRSTSNPREIKTIDFDSLSPSKLREQ 621

Query: 183  RVSSDISEKIADEKEMNRSREVFEHKHRSSRKIPTTPDPYKDLGKGWDEKEFSEIHSQSD 362
            +VSSDISEKIAD+KEMN SRE FEHK RSSRKIPTTP+PYKDLGK + +KEFS+IHS SD
Sbjct: 622  KVSSDISEKIADQKEMNHSREAFEHKPRSSRKIPTTPNPYKDLGKRFVQKEFSDIHSHSD 681

Query: 363  LLESRKRTEVIKSEKFPGRMEHTKELVQQKSPSTHRHSHSVKRVRESYDGESIKANKEIL 542
             LESRKR E IKSEKF G M+H+KEL +QKSPSTHRHSHSVKR++ESYDGES+KA+KE L
Sbjct: 682  QLESRKRNEAIKSEKFSGTMQHSKELDKQKSPSTHRHSHSVKRLKESYDGESVKADKENL 741

Query: 543  SHTNATKGKELHVGSEAPLTSSRKVEQND 629
            SHTN TKGKEL+V SEAPLTSS+KVEQND
Sbjct: 742  SHTNDTKGKELYVESEAPLTSSKKVEQND 770



 Score = 79.0 bits (193), Expect = 7e-12
 Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 3/56 (5%)
 Frame = +3

Query: 918  DTEKNHDSRASDDEHLRKEDRH--EIEES-SLQKRLEIELREKALESLRAKKGIRH 1076
            DTE+N ++RASDDEHLR+E +H  +IEES SLQKRLEIELREKALESLRAKKG+ H
Sbjct: 866  DTERNPNNRASDDEHLREEYQHGCKIEESESLQKRLEIELREKALESLRAKKGVSH 921


>ref|XP_002280607.2| PREDICTED: uncharacterized protein LOC100262120 [Vitis vinifera]
          Length = 922

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 17/225 (7%)
 Frame = +3

Query: 6    SRSPSVPESPGRSRSDSESAPTKRERSPSEDRGPKSTLNRRERKTIDTGSPSPRKLREHR 185
            ++ PS+  SP +SRS SES    R+ S SEDR   S      R+T    SP P K R+ +
Sbjct: 558  NKVPSLSASPEKSRSLSESPAHIRKSSSSEDRRSPSPYESPVRQTRKRPSPPP-KPRQQK 616

Query: 186  VSSDISEKIADEKEMNRSREVFEHKHRSSRKIPTTPDPYKDLGKGWD-------EKEFS- 341
               +  E   +E+E   +RE  +H+ +S  K  T P     +GK  D       ++E+S 
Sbjct: 617  PRHESPETSVEEEEY--AREDGDHRSKSLEKRSTYPSM---VGKQRDSPVKVHSKEEYSP 671

Query: 342  ---------EIHSQSDLLESRKRTEVIKSEKFPGRMEHTKELVQQKSPSTHRHSHSVKRV 494
                     E    S+  E RK ++ IKSE+  GR+ H K L QQKSP  ++ S   +R 
Sbjct: 672  ERLSGRRANETRGHSENTELRKESQKIKSERASGRVSHHKVLDQQKSP--YKDSLLGERQ 729

Query: 495  RESYDGESIKANKEILSHTNATKGKELHVGSEAPLTSSRKVEQND 629
            + SY GE  K +++  SH      K+L   S+A   S  KV Q +
Sbjct: 730  QTSYSGEGYKVDEKKNSHP-----KDLDHKSDALPKSLVKVGQKN 769


>emb|CBI16084.3| unnamed protein product [Vitis vinifera]
          Length = 866

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 17/225 (7%)
 Frame = +3

Query: 6    SRSPSVPESPGRSRSDSESAPTKRERSPSEDRGPKSTLNRRERKTIDTGSPSPRKLREHR 185
            ++ PS+  SP +SRS SES    R+ S SEDR   S      R+T    SP P K R+ +
Sbjct: 558  NKVPSLSASPEKSRSLSESPAHIRKSSSSEDRRSPSPYESPVRQTRKRPSPPP-KPRQQK 616

Query: 186  VSSDISEKIADEKEMNRSREVFEHKHRSSRKIPTTPDPYKDLGKGWD-------EKEFS- 341
               +  E   +E+E   +RE  +H+ +S  K  T P     +GK  D       ++E+S 
Sbjct: 617  PRHESPETSVEEEEY--AREDGDHRSKSLEKRSTYPSM---VGKQRDSPVKVHSKEEYSP 671

Query: 342  ---------EIHSQSDLLESRKRTEVIKSEKFPGRMEHTKELVQQKSPSTHRHSHSVKRV 494
                     E    S+  E RK ++ IKSE+  GR+ H K L QQKSP  ++ S   +R 
Sbjct: 672  ERLSGRRANETRGHSENTELRKESQKIKSERASGRVSHHKVLDQQKSP--YKDSLLGERQ 729

Query: 495  RESYDGESIKANKEILSHTNATKGKELHVGSEAPLTSSRKVEQND 629
            + SY GE  K +++  SH      K+L   S+A   S  KV Q +
Sbjct: 730  QTSYSGEGYKVDEKKNSHP-----KDLDHKSDALPKSLVKVGQKN 769


>ref|XP_002299851.2| hypothetical protein POPTR_0001s25140g [Populus trichocarpa]
            gi|550348135|gb|EEE84656.2| hypothetical protein
            POPTR_0001s25140g [Populus trichocarpa]
          Length = 826

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 68/215 (31%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
 Frame = +3

Query: 12   SPSVPESP--GRSRSDSESAPTKRERSPSEDRGPKSTLNRRERKTIDTGSPSPRKLREHR 185
            SPS   SP  GR RS SE      +RSPS    P     RRER T D GS SP + R  +
Sbjct: 491  SPSPERSPPVGRKRSASED-----KRSPSPYESPAR--QRRERITHD-GSLSPLQQRVRK 542

Query: 186  VSSDISEKIADEKEMNRSREVFEHKHRSSRKIPTTP---DPYKDLGKGW---DEKEFSEI 347
               D  E   D +E   +RE  ++   SS K P  P   D  +D    +   DE+    +
Sbjct: 543  PLKDSPESGKDHEETGYTREGGDYNSTSSHKRPLYPSNMDKQRDPPVKFHCKDEQALERL 602

Query: 348  HSQS--------DLLESRKRTEVIKSEKFPGRMEHTKELVQQKSPSTHRHSHSVKRVRES 503
             S          D ++SRK+ + IK  K  GR    + L  QKSPS +++     R+   
Sbjct: 603  ASHQTTDSRNYPDNMDSRKKDQDIKIGKSSGRGGDQETLEAQKSPSLYKNEKDRSRLNNV 662

Query: 504  YD------GESIKANKEILSHTNATKGKELHVGSE 590
             D       E++    E + H+N +    L  GSE
Sbjct: 663  KDSDKRRKSETVPVTAEKVHHSNGSGA--LDSGSE 695


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