BLASTX nr result

ID: Atropa21_contig00013210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013210
         (757 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345687.1| PREDICTED: serine/arginine-rich splicing fac...    89   2e-15
ref|XP_006345686.1| PREDICTED: serine/arginine-rich splicing fac...    89   2e-15
ref|XP_006345685.1| PREDICTED: serine/arginine-rich splicing fac...    89   2e-15
ref|XP_004246726.1| PREDICTED: uncharacterized protein LOC101266...    89   2e-15
ref|XP_004246725.1| PREDICTED: uncharacterized protein LOC101266...    89   2e-15

>ref|XP_006345687.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X3 [Solanum tuberosum]
          Length = 273

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = +1

Query: 226 PEEGSPMEAKSPPSPTREEGAYSQSPREXXXXXXXXXXXXXXXXXXXXXXXAEANXXXXX 405
           PEEGSPMEAKSPPSP REEGAYSQSPRE                       AEAN     
Sbjct: 182 PEEGSPMEAKSPPSPVREEGAYSQSPRERSVSPSSPRRDSPTPRKYDDDSPAEAN---GG 238

Query: 406 XXXXXKHHQRNHVD-DNEDEGEFRDQRSGRESESP 507
                  ++RNH D D+EDEGEF +QRSGRES+SP
Sbjct: 239 SRSPSPKYRRNHADEDDEDEGEFCNQRSGRESQSP 273


>ref|XP_006345686.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Solanum tuberosum]
          Length = 314

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = +1

Query: 226 PEEGSPMEAKSPPSPTREEGAYSQSPREXXXXXXXXXXXXXXXXXXXXXXXAEANXXXXX 405
           PEEGSPMEAKSPPSP REEGAYSQSPRE                       AEAN     
Sbjct: 223 PEEGSPMEAKSPPSPVREEGAYSQSPRERSVSPSSPRRDSPTPRKYDDDSPAEAN---GG 279

Query: 406 XXXXXKHHQRNHVD-DNEDEGEFRDQRSGRESESP 507
                  ++RNH D D+EDEGEF +QRSGRES+SP
Sbjct: 280 SRSPSPKYRRNHADEDDEDEGEFCNQRSGRESQSP 314


>ref|XP_006345685.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X1 [Solanum tuberosum]
          Length = 315

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = +1

Query: 226 PEEGSPMEAKSPPSPTREEGAYSQSPREXXXXXXXXXXXXXXXXXXXXXXXAEANXXXXX 405
           PEEGSPMEAKSPPSP REEGAYSQSPRE                       AEAN     
Sbjct: 224 PEEGSPMEAKSPPSPVREEGAYSQSPRERSVSPSSPRRDSPTPRKYDDDSPAEAN---GG 280

Query: 406 XXXXXKHHQRNHVD-DNEDEGEFRDQRSGRESESP 507
                  ++RNH D D+EDEGEF +QRSGRES+SP
Sbjct: 281 SRSPSPKYRRNHADEDDEDEGEFCNQRSGRESQSP 315


>ref|XP_004246726.1| PREDICTED: uncharacterized protein LOC101266446 isoform 2 [Solanum
           lycopersicum]
          Length = 295

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 52/94 (55%), Positives = 55/94 (58%)
 Frame = +1

Query: 226 PEEGSPMEAKSPPSPTREEGAYSQSPREXXXXXXXXXXXXXXXXXXXXXXXAEANXXXXX 405
           PEEGSPMEAKSP SP REEGAYSQSPRE                       AEAN     
Sbjct: 206 PEEGSPMEAKSPSSPMREEGAYSQSPRERSVSPSSTRRDSPAPRKYDDDSPAEAN---GG 262

Query: 406 XXXXXKHHQRNHVDDNEDEGEFRDQRSGRESESP 507
                  +QRNH DD EDEGEFR+QRSGRES+SP
Sbjct: 263 SRSPSPKYQRNHEDD-EDEGEFRNQRSGRESQSP 295


>ref|XP_004246725.1| PREDICTED: uncharacterized protein LOC101266446 isoform 1 [Solanum
           lycopersicum]
          Length = 315

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 52/94 (55%), Positives = 55/94 (58%)
 Frame = +1

Query: 226 PEEGSPMEAKSPPSPTREEGAYSQSPREXXXXXXXXXXXXXXXXXXXXXXXAEANXXXXX 405
           PEEGSPMEAKSP SP REEGAYSQSPRE                       AEAN     
Sbjct: 226 PEEGSPMEAKSPSSPMREEGAYSQSPRERSVSPSSTRRDSPAPRKYDDDSPAEAN---GG 282

Query: 406 XXXXXKHHQRNHVDDNEDEGEFRDQRSGRESESP 507
                  +QRNH DD EDEGEFR+QRSGRES+SP
Sbjct: 283 SRSPSPKYQRNHEDD-EDEGEFRNQRSGRESQSP 315


Top