BLASTX nr result

ID: Atropa21_contig00013188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013188
         (517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231524.1| PREDICTED: 4-alpha-glucanotransferase DPE2-l...    70   2e-10
ref|XP_006345302.1| PREDICTED: 4-alpha-glucanotransferase DPE2 [...    70   4e-10
ref|NP_001275176.1| 4-alpha-glucanotransferase [Solanum tuberosu...    67   3e-09

>ref|XP_004231524.1| PREDICTED: 4-alpha-glucanotransferase DPE2-like [Solanum
            lycopersicum]
          Length = 954

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/51 (74%), Positives = 38/51 (74%)
 Frame = +2

Query: 2    TKTIKDLVRGSGRCYPQKDLESGQANGVESAKPQLGSELPSLTQTNGLSKK 154
            TKTIKDLV GSGR YPQKDLESG   G  SAK QL SE PS TQ NGLS K
Sbjct: 904  TKTIKDLVHGSGRFYPQKDLESGHTIGEGSAKLQLQSEHPSQTQKNGLSNK 954


>ref|XP_006345302.1| PREDICTED: 4-alpha-glucanotransferase DPE2 [Solanum tuberosum]
          Length = 948

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/51 (76%), Positives = 39/51 (76%)
 Frame = +2

Query: 2    TKTIKDLVRGSGRCYPQKDLESGQANGVESAKPQLGSELPSLTQTNGLSKK 154
            TKTIKDLVRGSGR YPQKDLESGQ      AK QLGSE PS TQ NGLS K
Sbjct: 904  TKTIKDLVRGSGRFYPQKDLESGQ------AKLQLGSEHPSQTQKNGLSNK 948


>ref|NP_001275176.1| 4-alpha-glucanotransferase [Solanum tuberosum]
            gi|41176619|gb|AAR99599.1| 4-alpha-glucanotransferase
            [Solanum tuberosum]
          Length = 948

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/51 (74%), Positives = 38/51 (74%)
 Frame = +2

Query: 2    TKTIKDLVRGSGRCYPQKDLESGQANGVESAKPQLGSELPSLTQTNGLSKK 154
            TKTIKDLVRGSGR YPQKDLESGQ      AK QLGSE PS TQ  GLS K
Sbjct: 904  TKTIKDLVRGSGRFYPQKDLESGQ------AKLQLGSEHPSQTQKYGLSNK 948


Top