BLASTX nr result

ID: Atropa21_contig00013119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013119
         (861 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366051.1| PREDICTED: uncharacterized protein LOC102581...   390   e-106
ref|XP_004244135.1| PREDICTED: uncharacterized protein LOC101252...   364   2e-98
dbj|BAE45850.1| DNA polymerase [Nicotiana tabacum]                    355   1e-95
dbj|BAE45851.1| DNA polymerase [Nicotiana tabacum]                    351   2e-94

>ref|XP_006366051.1| PREDICTED: uncharacterized protein LOC102581629 [Solanum tuberosum]
          Length = 1119

 Score =  390 bits (1003), Expect = e-106
 Identities = 218/303 (71%), Positives = 236/303 (77%), Gaps = 17/303 (5%)
 Frame = -2

Query: 860 VQSSPFKSTSYVWXXXXXXXXXXXXXXSGRALHRREDCKMQSIENASSSLAVLDDSIKQI 681
           VQSSPFK TSYVW              SG+ALHR EDCK +SIENASSSLAVL D IKQI
Sbjct: 8   VQSSPFKPTSYVWFSPHSFSSRTFWASSGKALHRGEDCKTRSIENASSSLAVLGDPIKQI 67

Query: 680 SSHERKLFSTGLQQKIVEDSTYGWNAEIDALKALKAXXXXXXXXXKISVANCSVSASTNR 501
           SSHERKLFS+GLQQKI EDS YGWNAEIDA+KALKA         KIS ANCSVSASTNR
Sbjct: 68  SSHERKLFSSGLQQKIEEDSIYGWNAEIDAIKALKA-KSAYNSYKKISAANCSVSASTNR 126

Query: 500 KVKDENFDGPTVVYTKMMHERITSSYSATTCVSRGNLSSKSKPPYINSSRGEKKEVGNWR 321
           KVKDENFD P  V T+MM ER+TSSYSATTC+S G+LSSKSKPPY N +RGEKK+VGNWR
Sbjct: 127 KVKDENFDVPIEVNTRMMRERVTSSYSATTCISGGSLSSKSKPPY-NPNRGEKKDVGNWR 185

Query: 320 EYKNHLPQLSVGIDHSRNNEVTSVHKVDGTNVS--------SHINGRFSSKIMEAKLEKA 165
           EYKNHLPQLSVGI+HSRNNEVTS++KVDG NVS        S +NG+ SSKIMEAKLEKA
Sbjct: 186 EYKNHLPQLSVGINHSRNNEVTSINKVDGPNVSHYKPLSKGSLLNGQLSSKIMEAKLEKA 245

Query: 164 NKL---------RDSVNGTEAKVVTVKAKGVIQERATTKMETNAIQSVATDVVNVTKTKI 12
           NKL         RDSVNGT+ KVVTVKAK VIQE AT K E NAI+SVATD VN T+TKI
Sbjct: 246 NKLWEGNPSNQIRDSVNGTDTKVVTVKAKSVIQEPATNKREKNAIKSVATDFVNGTETKI 305

Query: 11  VSD 3
           VSD
Sbjct: 306 VSD 308


>ref|XP_004244135.1| PREDICTED: uncharacterized protein LOC101252794 [Solanum
           lycopersicum]
          Length = 1119

 Score =  364 bits (935), Expect = 2e-98
 Identities = 203/303 (66%), Positives = 228/303 (75%), Gaps = 17/303 (5%)
 Frame = -2

Query: 860 VQSSPFKSTSYVWXXXXXXXXXXXXXXSGRALHRREDCKMQSIENASSSLAVLDDSIKQI 681
           VQSSPFK TSYVW              SG+ALHR EDCK +SIENASSSLAV  D IKQI
Sbjct: 8   VQSSPFKPTSYVWFSPHSFSSRTFWASSGKALHRGEDCKTRSIENASSSLAVFGDPIKQI 67

Query: 680 SSHERKLFSTGLQQKIVEDSTYGWNAEIDALKALKAXXXXXXXXXKISVANCSVSASTNR 501
           SSHERKLFS+GLQQKI EDS YGWNAEIDA+KALKA         KIS ANCSVSAS +R
Sbjct: 68  SSHERKLFSSGLQQKIEEDSIYGWNAEIDAIKALKA-KNAYNSYKKISAANCSVSASIDR 126

Query: 500 KVKDENFDGPTVVYTKMMHERITSSYSATTCVSRGNLSSKSKPPYINSSRGEKKEVGNWR 321
           KV DEN D P  V T+MM ER+TSSYSATTC+S G+LSSKSKPP+ N +RGEKK+VGNWR
Sbjct: 127 KVNDENSDVPIEVNTRMMRERVTSSYSATTCISGGSLSSKSKPPH-NPNRGEKKDVGNWR 185

Query: 320 EYKNHLPQLSVGIDHSRNNEVTSVHKVDGTNVS--------SHINGRFSSKIMEAKLEKA 165
           EYK HLPQLSVGI+HSRNNEVTS++KVDG NVS        S++NG+ SSKI+ AK EKA
Sbjct: 186 EYKKHLPQLSVGINHSRNNEVTSINKVDGPNVSHYKPLSKGSNLNGQLSSKIVNAKFEKA 245

Query: 164 NKL---------RDSVNGTEAKVVTVKAKGVIQERATTKMETNAIQSVATDVVNVTKTKI 12
           NKL         RDSVNGT+ KVVTVKAK VI E+AT + E NA++SVATD VN  + KI
Sbjct: 246 NKLWQGNASNQIRDSVNGTDTKVVTVKAKSVILEQATIEREKNAVKSVATDFVNGNEAKI 305

Query: 11  VSD 3
           VSD
Sbjct: 306 VSD 308


>dbj|BAE45850.1| DNA polymerase [Nicotiana tabacum]
          Length = 1152

 Score =  355 bits (911), Expect = 1e-95
 Identities = 210/336 (62%), Positives = 232/336 (69%), Gaps = 50/336 (14%)
 Frame = -2

Query: 860  VQSSPFKSTSYVWXXXXXXXXXXXXXXS-GRALHRREDCKMQSIENASSSLAVLDDSIKQ 684
            VQSSPFK TSY+W              S G+ALHRREDCK QS+ENASSSLAVL DSIKQ
Sbjct: 8    VQSSPFKPTSYLWFSPHSFSSSRSFWASSGKALHRREDCKTQSVENASSSLAVLGDSIKQ 67

Query: 683  ISSHERKLFSTGLQQKIVEDSTYGWNAEIDALKALKAXXXXXXXXXKISVANCSVSASTN 504
            ISSHERKLFS+GLQ KI EDSTYGW AE +ALKA KA         KIS ANC+VSASTN
Sbjct: 68   ISSHERKLFSSGLQHKIEEDSTYGWIAETNALKASKA-KSSYNSYKKISAANCNVSASTN 126

Query: 503  RKVKDENFDGPTVVYTKMMHERITSSYSATTCVSRGNLSSKSKPPYINSSRGEKKEVGNW 324
            R+VKDE FD PT V T+MM ERITSSYSATTC+S GNLSSKSKPPY N + GEKK VGNW
Sbjct: 127  RRVKDEFFDVPTEVNTRMMRERITSSYSATTCISGGNLSSKSKPPY-NPAGGEKKVVGNW 185

Query: 323  REYKNHLPQLSVGIDHSRNNEVTSVHKVDGTNVS--------SHINGRFSSKIMEAKLEK 168
            REY+NHLPQ+SVG+ HSR N   SV+KVDG+NVS        SH+NG+ SSKIME KLEK
Sbjct: 186  REYENHLPQVSVGLTHSRVNGARSVNKVDGSNVSHYKPLSKGSHLNGQLSSKIMEPKLEK 245

Query: 167  ANKLRD---------SVNGTEAKVVTVKAKGVIQ-------------------------- 93
             NKLR+         SVNGTE KVVTVKAKGVIQ                          
Sbjct: 246  VNKLREGHASDQLRHSVNGTETKVVTVKAKGVIQERAMNKMEKNVIQAVTADVMNGAEAN 305

Query: 92   ------ERATTKMETNAIQSVATDVVNVTKTKIVSD 3
                  ERAT KME NAI+S+ATDVVN TKT+IV+D
Sbjct: 306  AKGVILERATNKMEKNAIESMATDVVNGTKTRIVND 341


>dbj|BAE45851.1| DNA polymerase [Nicotiana tabacum]
          Length = 1152

 Score =  351 bits (901), Expect = 2e-94
 Identities = 209/336 (62%), Positives = 228/336 (67%), Gaps = 50/336 (14%)
 Frame = -2

Query: 860  VQSSPFKSTSYVWXXXXXXXXXXXXXXS-GRALHRREDCKMQSIENASSSLAVLDDSIKQ 684
            VQSSPFK TSY+W              S G+ALHRREDCK QS+ENASSSLAVL DSIKQ
Sbjct: 8    VQSSPFKPTSYLWFSPHSFSSSRSFWASSGKALHRREDCKTQSVENASSSLAVLGDSIKQ 67

Query: 683  ISSHERKLFSTGLQQKIVEDSTYGWNAEIDALKALKAXXXXXXXXXKISVANCSVSASTN 504
            ISSHERKLFS+GLQ KI EDSTYGW  E +A KA KA         KIS ANC+VSASTN
Sbjct: 68   ISSHERKLFSSGLQHKIEEDSTYGWIVETNAFKASKA-KSSHNSYKKISAANCNVSASTN 126

Query: 503  RKVKDENFDGPTVVYTKMMHERITSSYSATTCVSRGNLSSKSKPPYINSSRGEKKEVGNW 324
             KVKDE FD PT V T+MM ERITSSYSATTC+S GNLSSK KPPY NS+ GEKK VGNW
Sbjct: 127  WKVKDEFFDVPTEVNTRMMRERITSSYSATTCISGGNLSSKGKPPY-NSAGGEKKVVGNW 185

Query: 323  REYKNHLPQLSVGIDHSRNNEVTSVHKVDGTNVS--------SHINGRFSSKIMEAKLEK 168
            REY+NHLPQLSVG++HSR N   SV+KVDG+NVS        SH+NG+ SSKIMEAKLEK
Sbjct: 186  REYENHLPQLSVGLNHSRVNGARSVNKVDGSNVSHYKPLSKGSHLNGQLSSKIMEAKLEK 245

Query: 167  ANKLRD---------SVNGTEAKVVTVKAKGVIQ-------------------------- 93
             NKLR+         SVNGTE KVV VK KGVIQ                          
Sbjct: 246  VNKLREGHASDQLRHSVNGTETKVVNVKVKGVIQERAMNKMEKNVIQAVTADVMNGAETN 305

Query: 92   ------ERATTKMETNAIQSVATDVVNVTKTKIVSD 3
                  ERAT KME NAIQS+ TDVVN TKT+IVSD
Sbjct: 306  AKRVILERATNKMEKNAIQSMETDVVNGTKTRIVSD 341


Top